Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0004431

Physical Location & Seq

Genomic Coordinates Reverse (-)

52046220 .. 52049791

Gene Structure 3572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG372000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGACTTCTCTCCAGCTCCTAAACCCCCCAGTTTTCGCGGGAAAACGAAACCCCCGCGTATGGACCACTGGGGTGACGCCACGTGGGTGTCTTAACGTGGACGTGCGAGCAGGGGATCAAAAGGTGCCGGCGGCTGTGGGGAGCCAGGAGGTGATGGAGGCGGAGAAGAGGGTTATGGTGGGGACGTACAATAGACCACCGGTGGTGATTGCCAGTGGCAAAGGATGTAAATTGTACGATCCGGAAGGGCGAGAGTATTTGGACTTGATGTCTGGGATTGCTGTCAATGCGCTTGGACATGGGGATCCGGATTGGATACGGGCCGTAACAGAGCAAGCCCATGTGCTCACCCATGTCAGCAATGTCTACTATTCCATTCCCCAGGTGGAGCTGGCAAAACGGCTGGTGGCTTGCTCCTTTGCTGACCGTGTCTTTTTCTCAAACTCCGGAACTGAAGCAAATGAAGCTGCCATAAAATTTGCAAGAAAGTTCCAAAGATTTTCAAACCCTGTGAAGAAAGAGCCTACAACAGAAATCATTTCTTTCACTAACAGCTTCCATGGGAGGACGATGGGGTCCGTGGCTCTGACTAGTAAAGAGCATTACCGATCACCATTTGAGCCTCTCATGCCTGGAGTCACTTTCTTAGATTATGGAAATGTACAAGCTGCAAGAAAGCTAATTAAATCTGGCAAAATCGCTGCTGTGTTTGTTGAACCTATCCAGGGTGAAGGTGGGATAAATAGTGCAACTAAAGAATTTTTGCAATCCTTGCGTGGTGCTTGTGATGATTCAGGTTCTCTTCTGGTCTTTGATGAGGTTCAATGTGGCTTGGGTCGAACTGGTTATCTCTGGGCGCATGAAGCTTATGGTGTATTCCCAGATATAATGACTCTGGCCAAGCCTCTTGCAGGAGGACTTCCCATAGGAGCTGTATTAGTGACTGAAAAGGTTGCTGCTTCAATGAAGTATGGAGAGCATGGAAGCACTTTTGCTGGGGGGCCCCTTATCTGCAATGCTGCCCTTGCGGTCTTGGACAAAATTTCCAAGCCTGAGTTTCTCAAAAGCGTCTCAGAGAAAGGTCAGTACTTCAAAGAAGTGCTGACAAAGAAGCTGGGTACAAATCCACATGTGAGAGAAGTACGGGGTTTGGGTCTCATTGTTGGAGTAGAGCTGGACGTGTCTGCTTCACCGCTTGTCGATGCCTGTAGGAATTGTGGTCTTCTGATAATAACAGCCGGAAAAGGAAATGTCCTCAGGCTTGTGCCGCCGTTGATCATCTCTAAGCCAGAATTGGAACATGCAGCTGAGATTTTGCTTGAATGTTTGCCTGCCCTTGATGGCTCTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003992 GO:0005488 GO:0005507 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006525 GO:0006526 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0008483 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016053 GO:0016740 GO:0016769 GO:0019752 GO:0019842 GO:0022622 GO:0030170 GO:0032501 GO:0032502 GO:0036094 GO:0042742 GO:0042802 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044419 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0048037 GO:0048364 GO:0048731 GO:0048856 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0070279 GO:0071704 GO:0080022 GO:0097159 GO:0098542 GO:0099402 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

450

Amino Acids

48.37

Weight (kDa)

8.27

Isoelectric Point (pI)

28.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	65 - 443	3.6e-116	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80600
fragaria_vesca	FvH4_3g15500 FvH4_3g15500 FvH4_6g29020
malus_domestica	MD05G1222800.v1.1 MD05G1223000.v1.1 MD10G1204400.v1.1 MD17G1219100.v1.1
prunus_persica	Prupe.3G094600_v2.0.a1 Prupe.4G137500_v2.0.a1
pyrus_communis	pycom05g20540
rosa_chinensis	RchiOBHm_Chr2g0133691 RchiOBHm_Chr5g0026121
rosa_laevigata	RLG00000019356 RLG00000032903
rosa_multiflora	Rmu_sc0000924.1_g000010 Rmu_sc0002806.1_g000006 Rmu_sc0002909.1_g000021 Rmu_sc0007285.1_g000005
rosa_roxburghii	Rroxscaffold_1G00053190 Rroxscaffold_2G00110900
rosa_rugosa	Rorug02G0313000 Rorug05G0090700
rosa_samantha	Rh2AG366400 Rh2BG372000 Rh2CG349500 Rh2DG388900 Rh5CG199400 Rh5DG182000
rosa_wichuraiana	Rw0G015720 Rw2G029810 Rw5G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	574
AccB1I	GGYRCC	1 cut(s)	124
AccI	GTMKAC	1 cut(s)	366
AccII	CGCG	2 cut(s)	38, 57
AccIII	TCCGGA	3 cut(s)	241, 307, 446
AciI	CCGC	7 cut(s)	38, 55, 131, 161, 1028, 1193, 1268
AclWI	GGATC	4 cut(s)	123, 233, 299, 312
AcoI	YGGCCR	1 cut(s)	897
AcsI	RAATTY	3 cut(s)	476, 758, 1041
AcuI	CTGAAG	1 cut(s)	474
AcvI	CACGTG	1 cut(s)	83
AcyI	GRCGYC	1 cut(s)	77
AfaI	GTAC	6 cut(s)	188, 236, 663, 1088, 1120, 1143
AfiI	CCNNNNNNNGG	3 cut(s)	60, 725, 911
AflIII	ACRYGT	2 cut(s)	1129, 1179
AgeI	ACCGGT	1 cut(s)	199
AgsI	TTSAA	6 cut(s)	504, 716, 824, 963, 1093, 1322
AhdI	GACNNNNNGTC	1 cut(s)	268
AhlI	ACTAGT	1 cut(s)	590
AjiI	CACGTC	2 cut(s)	103, 1180
AjnI	CCWGG	4 cut(s)	144, 381, 631, 723
AleI	CACNNNNGTG	2 cut(s)	71, 85
Alw21I	GWGCWC	1 cut(s)	348
Alw26I	GTCTC	2 cut(s)	1075, 1160
AlwI	GGATC	4 cut(s)	123, 233, 299, 312
Aor13HI	TCCGGA	3 cut(s)	241, 307, 446
AoxI	GGCC	3 cut(s)	321, 897, 1001
ApaI	GGGCCC	1 cut(s)	1005
ApeKI	GCWGC	6 cut(s)	467, 668, 701, 956, 1019, 1304
ApoI	RAATTY	3 cut(s)	476, 758, 1041
AsiGI	ACCGGT	1 cut(s)	199
AspLEI	GCGC	2 cut(s)	292, 859
AspS9I	GGNCC	5 cut(s)	63, 321, 576, 1001, 1002
AsuHPI	GGTGA	7 cut(s)	85, 163, 217, 340, 603, 740, 1182
AvaII	GGWCC	2 cut(s)	63, 576
AxyI	CCTNAGG	1 cut(s)	1256
BaeGI	GKGCMC	1 cut(s)	1005
BalI	TGGCCA	1 cut(s)	899
BamHI	GGATCC	1 cut(s)	304
BanI	GGYRCC	1 cut(s)	124
BanII	GRGCYC	1 cut(s)	1005
BbrPI	CACGTG	1 cut(s)	83
BbsI	GAAGAC	1 cut(s)	1214
Bbv12I	GWGCWC	1 cut(s)	348
BbvI	GCAGC	6 cut(s)	454, 655, 688, 943, 1006, 1316
BccI	CCATC	3 cut(s)	148, 565, 1334
BceAI	ACGGC	3 cut(s)	308, 416, 1255
BciT130I	CCWGG	4 cut(s)	146, 383, 633, 725
BciVI	GTATCC	1 cut(s)	309
BclI	TGATCA	1 cut(s)	1275
BcoDI	GTCTC	2 cut(s)	1075, 1160
BcuI	ACTAGT	1 cut(s)	590
BfaI	CTAG	1 cut(s)	591
BfmI	CTRYAG	1 cut(s)	1207
BfuI	GTATCC	1 cut(s)	309
BisI	GCNGC	8 cut(s)	132, 468, 669, 702, 957, 1020, 1268, 1305
BlsI	GCNGC	8 cut(s)	133, 469, 670, 703, 958, 1021, 1269, 1306
BmcAI	AGTACT	1 cut(s)	1088
Bme1390I	CCNGG	4 cut(s)	146, 383, 633, 725
Bme18I	GGWCC	2 cut(s)	63, 576
BmeRI	GACNNNNNGTC	1 cut(s)	268
BmgBI	CACGTC	2 cut(s)	103, 1180
BmgT120I	GGNCC	5 cut(s)	63, 321, 576, 1001, 1002
BmiI	GGNNCC	7 cut(s)	126, 143, 306, 577, 1002, 1003, 1004
BmrFI	CCNGG	4 cut(s)	146, 383, 633, 725
BmrI	ACTGGG	2 cut(s)	23, 78
BmsI	GCATC	1 cut(s)	1192
BmuI	ACTGGG	2 cut(s)	23, 78
BpiI	GAAGAC	1 cut(s)	1214
BpmI	CTGGAG	1 cut(s)	654
BsaAI	YACGTR	1 cut(s)	83
BsaHI	GRCGYC	1 cut(s)	77
BsaI	GGTCTC	1 cut(s)	1160
BsaJI	CCNNGG	4 cut(s)	381, 559, 579, 724
BsaWI	WCCGGW	4 cut(s)	199, 241, 307, 446
Bsc4I	CCNNNNNNNGG	3 cut(s)	60, 725, 911
Bse118I	RCCGGY	2 cut(s)	127, 199
Bse1I	ACTGG	4 cut(s)	29, 73, 213, 847
Bse21I	CCTNAGG	1 cut(s)	1256
Bse3DI	GCAATG	2 cut(s)	367, 1021
BseAI	TCCGGA	3 cut(s)	241, 307, 446
BseBI	CCWGG	4 cut(s)	146, 383, 633, 725
BseDI	CCNNGG	4 cut(s)	381, 559, 579, 724
BseGI	GGATG	1 cut(s)	230
BseLI	CCNNNNNNNGG	3 cut(s)	60, 725, 911
BseMI	GCAATG	2 cut(s)	367, 1021
BseMII	CTCAG	4 cut(s)	1044, 1086, 1270, 1299
BseNI	ACTGG	4 cut(s)	29, 73, 213, 847
BseSI	GKGCMC	1 cut(s)	1005
BseXI	GCAGC	6 cut(s)	454, 655, 688, 943, 1006, 1316
BseYI	CCCAGC	2 cut(s)	995, 1114
Bsh1236I	CGCG	2 cut(s)	38, 57
BshFI	GGCC	3 cut(s)	323, 899, 1003
BshNI	GGYRCC	1 cut(s)	124
BshTI	ACCGGT	1 cut(s)	199
BsiHKAI	GWGCWC	1 cut(s)	348
BsiSI	CCGG	6 cut(s)	128, 200, 242, 308, 447, 1239
BslFI	GGGAC	1 cut(s)	196
BslI	CCNNNNNNNGG	3 cut(s)	60, 725, 911
BsmAI	GTCTC	2 cut(s)	1075, 1160
BsmBI	CGTCTC	1 cut(s)	1075
BsmFI	GGGAC	1 cut(s)	196
BsnI	GGCC	3 cut(s)	323, 899, 1003
Bso31I	GGTCTC	1 cut(s)	1160
Bsp120I	GGGCCC	1 cut(s)	1001
Bsp1286I	GDGCHC	2 cut(s)	348, 1005
Bsp13I	TCCGGA	3 cut(s)	241, 307, 446
Bsp1407I	TGTACA	1 cut(s)	661
Bsp143I	GATC	5 cut(s)	115, 238, 304, 608, 1275
Bsp19I	CCATGG	1 cut(s)	559
BspACI	CCGC	7 cut(s)	38, 55, 131, 161, 1028, 1193, 1268
BspANI	GGCC	3 cut(s)	323, 899, 1003
BspCNI	CTCAG	4 cut(s)	1045, 1085, 1269, 1300
BspEI	TCCGGA	3 cut(s)	241, 307, 446
BspFNI	CGCG	2 cut(s)	38, 57
BspLI	GGNNCC	7 cut(s)	126, 143, 306, 577, 1002, 1003, 1004
BspPI	GGATC	4 cut(s)	123, 233, 299, 312
BspT107I	GGYRCC	1 cut(s)	124
BspTNI	GGTCTC	1 cut(s)	1160
BsrDI	GCAATG	2 cut(s)	367, 1021
BsrFI	RCCGGY	2 cut(s)	127, 199
BsrGI	TGTACA	1 cut(s)	661
BsrI	ACTGG	4 cut(s)	29, 73, 213, 847
BssAI	RCCGGY	2 cut(s)	127, 199
BssECI	CCNNGG	4 cut(s)	381, 559, 579, 724
BssMI	GATC	5 cut(s)	115, 238, 304, 608, 1275
BssNI	GRCGYC	1 cut(s)	77
BssT1I	CCWWGG	1 cut(s)	559
Bst2UI	CCWGG	4 cut(s)	146, 383, 633, 725
Bst4CI	ACNGT	1 cut(s)	428
Bst6I	CTCTTC	2 cut(s)	161, 807
BstACI	GRCGYC	1 cut(s)	77
BstAPI	GCANNNNNTGC	1 cut(s)	772
BstAUI	TGTACA	1 cut(s)	661
BstBAI	YACGTR	1 cut(s)	83
BstC8I	GCNNGC	6 cut(s)	108, 129, 336, 393, 412, 1332
BstDEI	CTNAG	6 cut(s)	646, 1053, 1072, 1256, 1284, 1308
BstDSI	CCRYGG	2 cut(s)	559, 579
BstENI	CCTNNNNNAGG	1 cut(s)	909
BstF5I	GGATG	1 cut(s)	230
BstFNI	CGCG	2 cut(s)	38, 57
BstHHI	GCGC	2 cut(s)	292, 859
BstKTI	GATC	5 cut(s)	118, 241, 307, 611, 1278
BstMAI	GTCTC	2 cut(s)	1075, 1160
BstMBI	GATC	5 cut(s)	115, 238, 304, 608, 1275
BstMWI	GCNNNNNNNGC	7 cut(s)	287, 464, 628, 772, 863, 1025, 1267
BstNI	CCWGG	4 cut(s)	146, 383, 633, 725
BstNSI	RCATGY	2 cut(s)	1133, 1304
BstSCI	CCNGG	4 cut(s)	144, 381, 631, 723
BstSFI	CTRYAG	1 cut(s)	1207
BstSLI	GKGCMC	1 cut(s)	1005
BstUI	CGCG	2 cut(s)	38, 57
BstV1I	GCAGC	6 cut(s)	454, 655, 688, 943, 1006, 1316
BstV2I	GAAGAC	1 cut(s)	1214
BstX2I	RGATCY	1 cut(s)	304
BstYI	RGATCY	1 cut(s)	304
Bsu36I	CCTNAGG	1 cut(s)	1256
BsuI	GTATCC	1 cut(s)	309
BsuRI	GGCC	3 cut(s)	323, 899, 1003
BtgI	CCRYGG	2 cut(s)	559, 579
BtrI	CACGTC	2 cut(s)	103, 1180
BtsCI	GGATG	1 cut(s)	230
BtsIMutI	CAGTG	2 cut(s)	66, 220
Cac8I	GCNNGC	6 cut(s)	108, 129, 336, 393, 412, 1332
CfoI	GCGC	2 cut(s)	292, 859
Cfr10I	RCCGGY	2 cut(s)	127, 199
Cfr13I	GGNCC	5 cut(s)	63, 321, 576, 1001, 1002
CseI	GACGC	2 cut(s)	85, 1057
Csp6I	GTAC	6 cut(s)	187, 235, 662, 1087, 1119, 1142
CspAI	ACCGGT	1 cut(s)	199
CviAII	CATG	9 cut(s)	299, 341, 353, 560, 628, 860, 980, 1130, 1301
CviQI	GTAC	6 cut(s)	187, 235, 662, 1087, 1119, 1142
DdeI	CTNAG	6 cut(s)	646, 1053, 1072, 1256, 1284, 1308
DpnI	GATC	5 cut(s)	117, 240, 306, 610, 1277
DpnII	GATC	5 cut(s)	115, 238, 304, 608, 1275
DrdI	GACNNNNNNGTC	1 cut(s)	574
DriI	GACNNNNNGTC	1 cut(s)	268
DseDI	GACNNNNNNGTC	1 cut(s)	574
EaeI	YGGCCR	1 cut(s)	897
Eam1104I	CTCTTC	2 cut(s)	161, 807
Eam1105I	GACNNNNNGTC	1 cut(s)	268
EarI	CTCTTC	2 cut(s)	161, 807
EciI	GGCGGA	1 cut(s)	176
Eco130I	CCWWGG	1 cut(s)	559
Eco24I	GRGCYC	1 cut(s)	1005
Eco31I	GGTCTC	1 cut(s)	1160
Eco47I	GGWCC	2 cut(s)	63, 576
Eco57I	CTGAAG	1 cut(s)	474
Eco72I	CACGTG	1 cut(s)	83
Eco81I	CCTNAGG	1 cut(s)	1256
EcoNI	CCTNNNNNAGG	1 cut(s)	909
EcoO109I	RGGNCCY	2 cut(s)	1001, 1002
EcoRII	CCWGG	4 cut(s)	144, 381, 631, 723
EcoT14I	CCWWGG	1 cut(s)	559
EcoT38I	GRGCYC	1 cut(s)	1005
ErhI	CCWWGG	1 cut(s)	559
Esp3I	CGTCTC	1 cut(s)	1075
FaeI	CATG	9 cut(s)	302, 344, 356, 563, 631, 863, 983, 1133, 1304
FaqI	GGGAC	1 cut(s)	196
FatI	CATG	9 cut(s)	298, 340, 352, 559, 627, 859, 979, 1129, 1300
FauI	CCCGC	2 cut(s)	31, 62
FbaI	TGATCA	1 cut(s)	1275
FblI	GTMKAC	1 cut(s)	366
Fnu4HI	GCNGC	8 cut(s)	132, 468, 669, 702, 957, 1020, 1268, 1305
FokI	GGATG	1 cut(s)	237
FriOI	GRGCYC	1 cut(s)	1005
Fsp4HI	GCNGC	8 cut(s)	132, 468, 669, 702, 957, 1020, 1268, 1305
FspBI	CTAG	1 cut(s)	591
GlaI	GCGC	2 cut(s)	291, 858
GluI	GCNGC	8 cut(s)	132, 468, 669, 702, 957, 1020, 1268, 1305
GsaI	CCCAGC	2 cut(s)	999, 1118
GsuI	CTGGAG	1 cut(s)	654
HaeIII	GGCC	3 cut(s)	323, 899, 1003
HapII	CCGG	6 cut(s)	128, 200, 242, 308, 447, 1239
HgaI	GACGC	2 cut(s)	85, 1057
HhaI	GCGC	2 cut(s)	292, 859
Hin1I	GRCGYC	1 cut(s)	77
Hin1II	CATG	9 cut(s)	302, 344, 356, 563, 631, 863, 983, 1133, 1304
Hin6I	GCGC	2 cut(s)	290, 857
HinP1I	GCGC	2 cut(s)	290, 857
HindIII	AAGCTT	1 cut(s)	864
HinfI	GANTC	3 cut(s)	636, 791, 892
HpaII	CCGG	6 cut(s)	128, 200, 242, 308, 447, 1239
HphI	GGTGA	7 cut(s)	85, 163, 217, 340, 603, 740, 1182
Hpy166II	GTNNAC	2 cut(s)	100, 367
Hpy188I	TCNGA	3 cut(s)	588, 1075, 1227
Hpy188III	TCNNGA	3 cut(s)	242, 308, 447
Hpy8I	GTNNAC	2 cut(s)	100, 367
HpyAV	CCTTC	2 cut(s)	239, 725
HpyCH4III	ACNGT	1 cut(s)	428
HpyCH4IV	ACGT	5 cut(s)	82, 96, 102, 185, 1179
HpyCH4V	TGCA	7 cut(s)	482, 671, 749, 766, 911, 1014, 1304
HpyF10VI	GCNNNNNNNGC	7 cut(s)	287, 464, 628, 772, 863, 1025, 1267
HpyF3I	CTNAG	6 cut(s)	646, 1053, 1072, 1256, 1284, 1308
HpySE526I	ACGT	5 cut(s)	82, 96, 102, 185, 1179
Hsp92I	GRCGYC	1 cut(s)	77
Hsp92II	CATG	9 cut(s)	302, 344, 356, 563, 631, 863, 983, 1133, 1304
HspAI	GCGC	2 cut(s)	290, 857
Kpn2I	TCCGGA	3 cut(s)	241, 307, 446
KroI	GCCGGC	1 cut(s)	127
KroNI	GCCGGC	1 cut(s)	129
Ksp22I	TGATCA	1 cut(s)	1275
Kzo9I	GATC	5 cut(s)	115, 238, 304, 608, 1275
LmnI	GCTCC	5 cut(s)	21, 141, 388, 419, 929
Lsp1109I	GCAGC	6 cut(s)	454, 655, 688, 943, 1006, 1316
LweI	GCATC	1 cut(s)	1192
MaeI	CTAG	1 cut(s)	591
MaeII	ACGT	5 cut(s)	82, 96, 102, 185, 1179
MaeIII	GTNAC	4 cut(s)	73, 325, 637, 940
MalI	GATC	5 cut(s)	117, 240, 306, 610, 1277
MboI	GATC	5 cut(s)	115, 238, 304, 608, 1275
MboII	GAAGA	4 cut(s)	178, 526, 794, 1214
MflI	RGATCY	1 cut(s)	304
MhlI	GDGCHC	2 cut(s)	348, 1005
MlsI	TGGCCA	1 cut(s)	899
MluCI	AATT	7 cut(s)	230, 476, 681, 758, 1041, 1213, 1292
MluNI	TGGCCA	1 cut(s)	899
MlyI	GAGTC	2 cut(s)	645, 886
MmeI	TCCRAC	1 cut(s)	1144
MnlI	CCTC	9 cut(s)	142, 151, 162, 558, 633, 811, 908, 915, 1265
Mox20I	TGGCCA	1 cut(s)	899
MroI	TCCGGA	3 cut(s)	241, 307, 446
MroNI	GCCGGC	1 cut(s)	127
MscI	TGGCCA	1 cut(s)	899
MseI	TTAA	2 cut(s)	93, 684
MslI	CAYNNNNRTG	2 cut(s)	71, 85
Msp20I	TGGCCA	1 cut(s)	899
MspA1I	CMGCKG	1 cut(s)	1307
MspI	CCGG	6 cut(s)	128, 200, 242, 308, 447, 1239
MspR9I	CCNGG	4 cut(s)	146, 383, 633, 725
MvaI	CCWGG	4 cut(s)	146, 383, 633, 725
MvnI	CGCG	2 cut(s)	38, 57
MwoI	GCNNNNNNNGC	7 cut(s)	287, 464, 628, 772, 863, 1025, 1267
NaeI	GCCGGC	1 cut(s)	129
NcoI	CCATGG	1 cut(s)	559
NdeII	GATC	5 cut(s)	115, 238, 304, 608, 1275
NgoMIV	GCCGGC	1 cut(s)	127
NlaIII	CATG	9 cut(s)	302, 344, 356, 563, 631, 863, 983, 1133, 1304
NlaIV	GGNNCC	7 cut(s)	126, 143, 306, 577, 1002, 1003, 1004
NmuCI	GTSAC	3 cut(s)	73, 637, 940
NspI	RCATGY	2 cut(s)	1133, 1304
OliI	CACNNNNGTG	2 cut(s)	71, 85
PciI	ACATGT	1 cut(s)	1129
PdiI	GCCGGC	1 cut(s)	129
PfeI	GAWTC	1 cut(s)	791
PflFI	GACNNNGTC	1 cut(s)	428
PinAI	ACCGGT	1 cut(s)	199
PkrI	GCNGC	8 cut(s)	133, 469, 670, 703, 958, 1021, 1269, 1306
PleI	GAGTC	2 cut(s)	644, 886
PmaCI	CACGTG	1 cut(s)	83
PmlI	CACGTG	1 cut(s)	83
PpsI	GAGTC	2 cut(s)	644, 886
Ppu21I	YACGTR	1 cut(s)	83
PscI	ACATGT	1 cut(s)	1129
Psp6I	CCWGG	4 cut(s)	144, 381, 631, 723
PspCI	CACGTG	1 cut(s)	83
PspFI	CCCAGC	2 cut(s)	995, 1114
PspGI	CCWGG	4 cut(s)	144, 381, 631, 723
PspN4I	GGNNCC	7 cut(s)	126, 143, 306, 577, 1002, 1003, 1004
PspOMI	GGGCCC	1 cut(s)	1001
PspPI	GGNCC	5 cut(s)	63, 321, 576, 1001, 1002
PsuI	RGATCY	1 cut(s)	304
PsyI	GACNNNGTC	1 cut(s)	428
PvuII	CAGCTG	1 cut(s)	1307
RsaI	GTAC	6 cut(s)	188, 236, 663, 1088, 1120, 1143
RsaNI	GTAC	6 cut(s)	187, 235, 662, 1087, 1119, 1142
RseI	CAYNNNNRTG	2 cut(s)	71, 85
SaqAI	TTAA	2 cut(s)	93, 684
SatI	GCNGC	8 cut(s)	132, 468, 669, 702, 957, 1020, 1268, 1305
Sau3AI	GATC	5 cut(s)	115, 238, 304, 608, 1275
Sau96I	GGNCC	5 cut(s)	63, 321, 576, 1001, 1002
ScaI	AGTACT	1 cut(s)	1088
SchI	GAGTC	2 cut(s)	645, 886
ScrFI	CCNGG	4 cut(s)	146, 383, 633, 725
SduI	GDGCHC	2 cut(s)	348, 1005
SfaNI	GCATC	1 cut(s)	1192
SfcI	CTRYAG	1 cut(s)	1207
SgrAI	CRCCGGYG	1 cut(s)	199
SinI	GGWCC	2 cut(s)	63, 576
SmiMI	CAYNNNNRTG	2 cut(s)	71, 85
SpeI	ACTAGT	1 cut(s)	590
Sse9I	AATT	7 cut(s)	230, 476, 681, 758, 1041, 1213, 1292
SsiI	CCGC	7 cut(s)	38, 55, 131, 161, 1028, 1193, 1268
SspMI	CTAG	1 cut(s)	591
StyD4I	CCNGG	4 cut(s)	144, 381, 631, 723
StyI	CCWWGG	1 cut(s)	559
TaaI	ACNGT	1 cut(s)	428
TaiI	ACGT	5 cut(s)	85, 99, 105, 188, 1182
TaqI	TCGA	2 cut(s)	838, 1200
TasI	AATT	7 cut(s)	230, 476, 681, 758, 1041, 1213, 1292
TatI	WGTACW	2 cut(s)	661, 1086
TauI	GCSGC	2 cut(s)	134, 1270
TfiI	GAWTC	1 cut(s)	791
Tru1I	TTAA	2 cut(s)	93, 684
Tru9I	TTAA	2 cut(s)	93, 684
TscAI	CASTG	2 cut(s)	73, 220
TseFI	GTSAC	3 cut(s)	73, 637, 940
TseI	GCWGC	6 cut(s)	467, 668, 701, 956, 1019, 1304
Tsp45I	GTSAC	3 cut(s)	73, 637, 940
TspDTI	ATGAA	3 cut(s)	477, 876, 980
TspGWI	ACGGA	1 cut(s)	568
TspRI	CASTG	2 cut(s)	73, 220
Tth111I	GACNNNGTC	1 cut(s)	428
VpaK11BI	GGWCC	2 cut(s)	63, 576
XagI	CCTNNNNNAGG	1 cut(s)	909
XapI	RAATTY	3 cut(s)	476, 758, 1041
XceI	RCATGY	2 cut(s)	1133, 1304
XcmI	CCANNNNNNNNNTGG	2 cut(s)	382, 731
XmiI	GTMKAC	1 cut(s)	366
XspI	CTAG	1 cut(s)	591
ZrmI	AGTACT	1 cut(s)	1088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.