Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0004431

Physical Location & Seq

Genomic Coordinates Forward (+)

20037705 .. 20041298

Gene Structure 3594 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG199400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGACTTCCCTTCAAATCTCCCCCAACACAATTTCTCAACCTCTCAATCTCCGCCGTCAATTCAGCTCAATCTTGGACCAAAGGGTCCGACTAATCAATGGCCGGAGACCTGTGATGGCTTGCCTTAGCCTTGATGTGGAAGCACCAGTTACTGCATCAAAATCAGGGTTTTCGAAGAGCAAGGAGGTCATAGAGACAGAGGCGAAGGTTCTGGTGGGGACATACGCAAGAACTCCAGTGGTGTTGGCCAGTGGCAAAGGTTGTAAATTGTACGACATCGAGGGGAGAGAGTATTTGGATTTGAGCTCAGGGATTGCGGTGAATGCACTTGGACATGGTGATGAGGACTGGTTGAAGGCTGTGGTTGAACAGGCCAATACCCTCACTCATGTCAGCAATGTCTACTACTCCATCCCTCAGGTGGAACTAGCAGAGCGTTTGGTGGGCTCTTGTTTTGCAGACCGTGTGTTCTTCACTAATTCTGGAACTGAAGCAAATGAAGCAGCCATTAAATTTGCAAGGAAGTTTCAGAGACACAATCATCCTGATGCGAAAGAGCCTGCCACAAACTTCATTTCTTTCACTAACAGCTTCCATGGCAGGACCATGGGTGCGCTTGCCTTGACTAGCAAAGAGTATTACAGGTCTCCATTTGAGCCCGTCATGCCTGGAGTCACATTTGCAGAGTATGGAAATATAGAAGATACCAGAAAATTGATTCAGCCTGGAAAAACTGCTGCGGTTTTTGTTGAACCTATCCAGGGTGAAGGGGGCATATACAGTGCTACCAAGGAGTTTCTGCAATTTCTGCGTACTGCTTGTGATGAGGCTGGGGCTCTTCTGGTGTTCGACGAGGTTCAATGTGGTTTAGGCCGAACTGGGTATCTGTGGGCGCATGAGTCATTTGGTGTGTTCCCAGATATAATGACACTAGCTAAGCCACTAGCTGGAGGCCTACCCATTGGAGCTGCATTGGTGACTGAAAGAGTTGCTTCTGCCATAGCTTTCGGTGACCATGGAAGTACTTTTGCCGGTGCACCTCTCGTGTGCAATGCTGCCTTAGCCGTTCTCAAAAAGATATCAAATCCCAATTTTCTGGACAGTGTCTCTAAGAAAGGTGTCTACTTCAAACATATCTTAAATCAGAAGCTGGGAGGAAACCCTCATGTGAGAGAAATACGCGGTTTTGGGCTTATTATTGGAGTTGAATTGGATGTCCCTGCCTCACCTCTTTTGGATGCATGTAGAAGTGCCGGCCTTCTAGTGTTAACTGCTGGAAAAGGCAATGTTGTGAGGCTAGTGCCTCCATTGATCATAAGTGAGCAGGAGCTTGATCGTGCAGCTGAGATTTTGTACCAATCGTTGCCTGTACTTGACGAAAAAAATTCAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

464

Amino Acids

50.17

Weight (kDa)

6.53

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	78 - 453	5.3e-114	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80600
fragaria_vesca	FvH4_3g15500 FvH4_3g15500 FvH4_6g29020
malus_domestica	MD05G1222800.v1.1 MD05G1223000.v1.1 MD10G1204400.v1.1 MD17G1219100.v1.1
prunus_persica	Prupe.3G094600_v2.0.a1 Prupe.4G137500_v2.0.a1
pyrus_communis	pycom05g20540
rosa_chinensis	RchiOBHm_Chr2g0133691 RchiOBHm_Chr5g0026121
rosa_laevigata	RLG00000019356 RLG00000032903
rosa_multiflora	Rmu_sc0000924.1_g000010 Rmu_sc0002806.1_g000006 Rmu_sc0002909.1_g000021 Rmu_sc0007285.1_g000005
rosa_roxburghii	Rroxscaffold_1G00053190 Rroxscaffold_2G00110900
rosa_rugosa	Rorug02G0313000 Rorug05G0090700
rosa_samantha	Rh2AG366400 Rh2BG372000 Rh2CG349500 Rh2DG388900 Rh5CG199400 Rh5DG182000
rosa_wichuraiana	Rw0G015720 Rw2G029810 Rw5G016620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	83
AccB7I	CCANNNNNTGG	1 cut(s)	947
AccI	GTMKAC	2 cut(s)	402, 1122
AccII	CGCG	1 cut(s)	1182
AciI	CCGC	4 cut(s)	52, 317, 740, 1182
AcoI	YGGCCR	2 cut(s)	100, 246
AcsI	RAATTY	2 cut(s)	512, 1384
AcuI	CTGAAG	1 cut(s)	510
AfaI	GTAC	5 cut(s)	272, 814, 1024, 1355, 1371
AfiI	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
AgsI	TTSAA	8 cut(s)	14, 355, 368, 752, 860, 1129, 1208, 1389
AjnI	CCWGG	3 cut(s)	667, 724, 759
Alw21I	GWGCWC	2 cut(s)	308, 1039
Alw26I	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
Alw44I	GTGCAC	1 cut(s)	1035
AlwNI	CAGNNNCTG	2 cut(s)	152, 1150
AoxI	GGCC	6 cut(s)	100, 246, 372, 871, 952, 1255
ApaLI	GTGCAC	1 cut(s)	1035
ApeKI	GCWGC	5 cut(s)	503, 737, 968, 1055, 1340
ApoI	RAATTY	2 cut(s)	512, 1384
AspLEI	GCGC	2 cut(s)	616, 895
AspS9I	GGNCC	3 cut(s)	76, 85, 603
AsuHPI	GGTGA	6 cut(s)	331, 350, 776, 988, 1022, 1218
AsuII	TTCGAA	1 cut(s)	173
AvaII	GGWCC	3 cut(s)	76, 85, 603
AxyI	CCTNAGG	1 cut(s)	417
BaeGI	GKGCMC	1 cut(s)	1039
BalI	TGGCCA	1 cut(s)	248
BanII	GRGCYC	4 cut(s)	308, 449, 660, 838
BauI	CACGAG	1 cut(s)	1043
Bbv12I	GWGCWC	2 cut(s)	308, 1039
BbvI	GCAGC	5 cut(s)	515, 724, 955, 1042, 1352
BccI	CCATC	2 cut(s)	109, 419
BceAI	ACGGC	2 cut(s)	39, 1049
BciT130I	CCWGG	3 cut(s)	669, 726, 761
BclI	TGATCA	1 cut(s)	1311
BcoDI	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
BfaI	CTAG	6 cut(s)	428, 627, 932, 944, 1262, 1298
BisI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1341
BlpI	GCTNAGC	1 cut(s)	936
BlsI	GCNGC	5 cut(s)	505, 739, 970, 1057, 1342
BmcAI	AGTACT	1 cut(s)	1024
Bme1390I	CCNGG	3 cut(s)	669, 726, 761
Bme18I	GGWCC	3 cut(s)	76, 85, 603
BmgT120I	GGNCC	3 cut(s)	76, 85, 603
BmiI	GGNNCC	1 cut(s)	86
BmrFI	CCNGG	3 cut(s)	669, 726, 761
BmrI	ACTGGG	1 cut(s)	888
BmsI	GCATC	3 cut(s)	164, 538, 1228
BmuI	ACTGGG	1 cut(s)	888
BpmI	CTGGAG	3 cut(s)	219, 690, 969
Bpu10I	CCTNAGC	3 cut(s)	125, 307, 1060
Bpu1102I	GCTNAGC	1 cut(s)	936
Bpu14I	TTCGAA	1 cut(s)	173
BsaI	GGTCTC	2 cut(s)	100, 651
BsaJI	CCNNGG	5 cut(s)	595, 606, 760, 789, 1015
Bsc4I	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
Bse118I	RCCGGY	2 cut(s)	1031, 1253
Bse1I	ACTGG	5 cut(s)	146, 236, 249, 353, 883
Bse21I	CCTNAGG	1 cut(s)	417
Bse3DI	GCAATG	3 cut(s)	403, 1057, 1291
BseBI	CCWGG	3 cut(s)	669, 726, 761
BseDI	CCNNGG	5 cut(s)	595, 606, 760, 789, 1015
BseGI	GGATG	4 cut(s)	411, 541, 1219, 1243
BseLI	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
BseMI	GCAATG	3 cut(s)	403, 1057, 1291
BseMII	CTCAG	3 cut(s)	321, 431, 1335
BseNI	ACTGG	5 cut(s)	146, 236, 249, 353, 883
BseSI	GKGCMC	1 cut(s)	1039
BseXI	GCAGC	5 cut(s)	515, 724, 955, 1042, 1352
BseYI	CCCAGC	2 cut(s)	830, 1150
BsgI	GTGCAG	1 cut(s)	1359
Bsh1236I	CGCG	1 cut(s)	1182
BshFI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1257
BsiHKAI	GWGCWC	2 cut(s)	308, 1039
BsiSI	CCGG	3 cut(s)	103, 1032, 1254
BslFI	GGGAC	2 cut(s)	232, 1202
BslI	CCNNNNNNNGG	4 cut(s)	136, 421, 761, 947
BsmAI	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
BsmFI	GGGAC	2 cut(s)	232, 1202
BsmI	GAATGC	1 cut(s)	328
BsnI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1257
Bso31I	GGTCTC	2 cut(s)	100, 651
Bsp119I	TTCGAA	1 cut(s)	173
Bsp1286I	GDGCHC	5 cut(s)	308, 449, 660, 838, 1039
Bsp143I	GATC	2 cut(s)	1311, 1333
Bsp1720I	GCTNAGC	1 cut(s)	936
Bsp19I	CCATGG	3 cut(s)	595, 606, 1015
BspACI	CCGC	4 cut(s)	52, 317, 740, 1182
BspANI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1257
BspCNI	CTCAG	3 cut(s)	320, 430, 1336
BspFNI	CGCG	1 cut(s)	1182
BspLI	GGNNCC	1 cut(s)	86
BspQI	GCTCTTC	2 cut(s)	170, 843
BspT104I	TTCGAA	1 cut(s)	173
BspTNI	GGTCTC	2 cut(s)	100, 651
BsrDI	GCAATG	3 cut(s)	403, 1057, 1291
BsrFI	RCCGGY	2 cut(s)	1031, 1253
BsrI	ACTGG	5 cut(s)	146, 236, 249, 353, 883
BssAI	RCCGGY	2 cut(s)	1031, 1253
BssECI	CCNNGG	5 cut(s)	595, 606, 760, 789, 1015
BssMI	GATC	2 cut(s)	1311, 1333
BssSI	CACGAG	1 cut(s)	1043
BssT1I	CCWWGG	4 cut(s)	595, 606, 789, 1015
Bst2BI	CACGAG	1 cut(s)	1043
Bst2UI	CCWGG	3 cut(s)	669, 726, 761
Bst4CI	ACNGT	3 cut(s)	464, 782, 1103
Bst6I	CTCTTC	2 cut(s)	170, 843
BstAPI	GCANNNNNTGC	1 cut(s)	808
BstBI	TTCGAA	1 cut(s)	173
BstC8I	GCNNGC	4 cut(s)	121, 561, 618, 1255
BstDEI	CTNAG	7 cut(s)	125, 307, 417, 936, 1060, 1110, 1344
BstDSI	CCRYGG	3 cut(s)	595, 606, 1015
BstEII	GGTNACC	1 cut(s)	1010
BstF5I	GGATG	4 cut(s)	411, 541, 1219, 1243
BstFNI	CGCG	1 cut(s)	1182
BstHHI	GCGC	2 cut(s)	616, 895
BstKTI	GATC	2 cut(s)	1314, 1336
BstMAI	GTCTC	5 cut(s)	100, 188, 526, 651, 1111
BstMBI	GATC	2 cut(s)	1311, 1333
BstMWI	GCNNNNNNNGC	6 cut(s)	323, 500, 597, 664, 808, 1061
BstNI	CCWGG	3 cut(s)	669, 726, 761
BstNSI	RCATGY	1 cut(s)	1245
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	3 cut(s)	667, 724, 759
BstSLI	GKGCMC	1 cut(s)	1039
BstUI	CGCG	1 cut(s)	1182
BstV1I	GCAGC	5 cut(s)	515, 724, 955, 1042, 1352
BstXI	CCANNNNNNTGG	1 cut(s)	1096
Bsu36I	CCTNAGG	1 cut(s)	417
BsuRI	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1257
BtgI	CCRYGG	3 cut(s)	595, 606, 1015
BtsCI	GGATG	4 cut(s)	411, 541, 1219, 1243
BtsIMutI	CAGTG	4 cut(s)	243, 256, 787, 1108
Cac8I	GCNNGC	4 cut(s)	121, 561, 618, 1255
CaiI	CAGNNNCTG	2 cut(s)	152, 1150
CfoI	GCGC	2 cut(s)	616, 895
Cfr10I	RCCGGY	2 cut(s)	1031, 1253
Cfr13I	GGNCC	3 cut(s)	76, 85, 603
Csp6I	GTAC	5 cut(s)	271, 813, 1023, 1354, 1370
CviAII	CATG	9 cut(s)	335, 389, 596, 607, 664, 896, 1016, 1166, 1242
CviQI	GTAC	5 cut(s)	271, 813, 1023, 1354, 1370
DdeI	CTNAG	7 cut(s)	125, 307, 417, 936, 1060, 1110, 1344
DpnI	GATC	2 cut(s)	1313, 1335
DpnII	GATC	2 cut(s)	1311, 1333
DrdI	GACNNNNNNGTC	1 cut(s)	83
DseDI	GACNNNNNNGTC	1 cut(s)	83
EaeI	YGGCCR	2 cut(s)	100, 246
Eam1104I	CTCTTC	2 cut(s)	170, 843
EarI	CTCTTC	2 cut(s)	170, 843
EciI	GGCGGA	1 cut(s)	41
Ecl136II	GAGCTC	1 cut(s)	306
Eco130I	CCWWGG	4 cut(s)	595, 606, 789, 1015
Eco147I	AGGCCT	1 cut(s)	954
Eco24I	GRGCYC	4 cut(s)	308, 449, 660, 838
Eco31I	GGTCTC	2 cut(s)	100, 651
Eco32I	GATATC	1 cut(s)	1080
Eco47I	GGWCC	3 cut(s)	76, 85, 603
Eco53kI	GAGCTC	1 cut(s)	306
Eco57I	CTGAAG	1 cut(s)	510
Eco81I	CCTNAGG	1 cut(s)	417
Eco91I	GGTNACC	1 cut(s)	1010
EcoICRI	GAGCTC	1 cut(s)	306
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRII	CCWGG	3 cut(s)	667, 724, 759
EcoRV	GATATC	1 cut(s)	1080
EcoT14I	CCWWGG	4 cut(s)	595, 606, 789, 1015
EcoT22I	ATGCAT	1 cut(s)	1243
EcoT38I	GRGCYC	4 cut(s)	308, 449, 660, 838
ErhI	CCWWGG	4 cut(s)	595, 606, 789, 1015
FaeI	CATG	9 cut(s)	338, 392, 599, 610, 667, 899, 1019, 1169, 1245
FalI	AAGNNNNNCTT	2 cut(s)	976, 1008
FaqI	GGGAC	2 cut(s)	232, 1202
FatI	CATG	9 cut(s)	334, 388, 595, 606, 663, 895, 1015, 1165, 1241
FbaI	TGATCA	1 cut(s)	1311
FblI	GTMKAC	2 cut(s)	402, 1122
Fnu4HI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1341
FokI	GGATG	4 cut(s)	398, 528, 1226, 1250
FriOI	GRGCYC	4 cut(s)	308, 449, 660, 838
Fsp4HI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1341
FspBI	CTAG	6 cut(s)	428, 627, 932, 944, 1262, 1298
GlaI	GCGC	2 cut(s)	615, 894
GluI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1341
GsaI	CCCAGC	2 cut(s)	834, 1154
GsuI	CTGGAG	3 cut(s)	219, 690, 969
HaeIII	GGCC	6 cut(s)	102, 248, 374, 873, 954, 1257
HapII	CCGG	3 cut(s)	103, 1032, 1254
HhaI	GCGC	2 cut(s)	616, 895
Hin1II	CATG	9 cut(s)	338, 392, 599, 610, 667, 899, 1019, 1169, 1245
Hin6I	GCGC	2 cut(s)	614, 893
HinP1I	GCGC	2 cut(s)	614, 893
HincII	GTYRAC	1 cut(s)	1269
HindII	GTYRAC	1 cut(s)	1269
HinfI	GANTC	3 cut(s)	672, 718, 899
HpaI	GTTAAC	1 cut(s)	1269
HpaII	CCGG	3 cut(s)	103, 1032, 1254
HphI	GGTGA	6 cut(s)	331, 350, 776, 988, 1022, 1218
Hpy166II	GTNNAC	4 cut(s)	403, 1037, 1123, 1269
Hpy188I	TCNGA	3 cut(s)	89, 531, 1146
Hpy188III	TCNNGA	3 cut(s)	483, 545, 1097
Hpy8I	GTNNAC	4 cut(s)	403, 1037, 1123, 1269
Hpy99I	CGWCG	1 cut(s)	854
HpyAV	CCTTC	5 cut(s)	20, 199, 349, 761, 1268
HpyCH4III	ACNGT	3 cut(s)	464, 782, 1103
HpyF10VI	GCNNNNNNNGC	6 cut(s)	323, 500, 597, 664, 808, 1061
HpyF3I	CTNAG	7 cut(s)	125, 307, 417, 936, 1060, 1110, 1344
Hsp92II	CATG	9 cut(s)	338, 392, 599, 610, 667, 899, 1019, 1169, 1245
HspAI	GCGC	2 cut(s)	614, 893
KroI	GCCGGC	1 cut(s)	1253
KroNI	GCCGGC	1 cut(s)	1255
Ksp22I	TGATCA	1 cut(s)	1311
KspAI	GTTAAC	1 cut(s)	1269
Kzo9I	GATC	2 cut(s)	1311, 1333
LguI	GCTCTTC	2 cut(s)	170, 843
LmnI	GCTCC	2 cut(s)	965, 1327
Lsp1109I	GCAGC	5 cut(s)	515, 724, 955, 1042, 1352
LweI	GCATC	3 cut(s)	164, 538, 1228
MaeI	CTAG	6 cut(s)	428, 627, 932, 944, 1262, 1298
MaeIII	GTNAC	4 cut(s)	148, 673, 976, 1010
MalI	GATC	2 cut(s)	1313, 1335
MboI	GATC	2 cut(s)	1311, 1333
MboII	GAAGA	4 cut(s)	187, 463, 713, 830
MhlI	GDGCHC	5 cut(s)	308, 449, 660, 838, 1039
MlsI	TGGCCA	1 cut(s)	248
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	2 cut(s)	681, 908
MmeI	TCCRAC	1 cut(s)	112
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	1243
MroNI	GCCGGC	1 cut(s)	1253
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	3 cut(s)	510, 1139, 1268
MslI	CAYNNNNRTG	2 cut(s)	339, 546
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	1 cut(s)	1343
MspI	CCGG	3 cut(s)	103, 1032, 1254
MspR9I	CCNGG	3 cut(s)	669, 726, 761
Mva1269I	GAATGC	1 cut(s)	328
MvaI	CCWGG	3 cut(s)	669, 726, 761
MvnI	CGCG	1 cut(s)	1182
MwoI	GCNNNNNNNGC	6 cut(s)	323, 500, 597, 664, 808, 1061
NaeI	GCCGGC	1 cut(s)	1255
NcoI	CCATGG	3 cut(s)	595, 606, 1015
NdeII	GATC	2 cut(s)	1311, 1333
NgoMIV	GCCGGC	1 cut(s)	1253
NlaIII	CATG	9 cut(s)	338, 392, 599, 610, 667, 899, 1019, 1169, 1245
NlaIV	GGNNCC	1 cut(s)	86
NmuCI	GTSAC	3 cut(s)	673, 976, 1010
NsiI	ATGCAT	1 cut(s)	1243
NspI	RCATGY	1 cut(s)	1245
NspV	TTCGAA	1 cut(s)	173
PceI	AGGCCT	1 cut(s)	954
PciSI	GCTCTTC	2 cut(s)	170, 843
PctI	GAATGC	1 cut(s)	328
PdiI	GCCGGC	1 cut(s)	1255
PfeI	GAWTC	1 cut(s)	718
PflFI	GACNNNGTC	1 cut(s)	1103
PflMI	CCANNNNNTGG	1 cut(s)	947
PkrI	GCNGC	5 cut(s)	505, 739, 970, 1057, 1342
PleI	GAGTC	2 cut(s)	680, 907
PpsI	GAGTC	2 cut(s)	680, 907
Psp124BI	GAGCTC	1 cut(s)	308
Psp6I	CCWGG	3 cut(s)	667, 724, 759
PspEI	GGTNACC	1 cut(s)	1010
PspFI	CCCAGC	2 cut(s)	830, 1150
PspGI	CCWGG	3 cut(s)	667, 724, 759
PspN4I	GGNNCC	1 cut(s)	86
PspPI	GGNCC	3 cut(s)	76, 85, 603
PstNI	CAGNNNCTG	2 cut(s)	152, 1150
PsyI	GACNNNGTC	1 cut(s)	1103
PvuII	CAGCTG	1 cut(s)	1343
RsaI	GTAC	5 cut(s)	272, 814, 1024, 1355, 1371
RsaNI	GTAC	5 cut(s)	271, 813, 1023, 1354, 1370
RseI	CAYNNNNRTG	2 cut(s)	339, 546
SacI	GAGCTC	1 cut(s)	308
SapI	GCTCTTC	2 cut(s)	170, 843
SaqAI	TTAA	3 cut(s)	510, 1139, 1268
SatI	GCNGC	5 cut(s)	504, 738, 969, 1056, 1341
Sau3AI	GATC	2 cut(s)	1311, 1333
Sau96I	GGNCC	3 cut(s)	76, 85, 603
ScaI	AGTACT	1 cut(s)	1024
SchI	GAGTC	2 cut(s)	681, 908
ScrFI	CCNGG	3 cut(s)	669, 726, 761
SduI	GDGCHC	5 cut(s)	308, 449, 660, 838, 1039
SfaNI	GCATC	3 cut(s)	164, 538, 1228
SfuI	TTCGAA	1 cut(s)	173
SinI	GGWCC	3 cut(s)	76, 85, 603
SmiMI	CAYNNNNRTG	2 cut(s)	339, 546
SseBI	AGGCCT	1 cut(s)	954
SsiI	CCGC	4 cut(s)	52, 317, 740, 1182
SspMI	CTAG	6 cut(s)	428, 627, 932, 944, 1262, 1298
SstI	GAGCTC	1 cut(s)	308
StuI	AGGCCT	1 cut(s)	954
StyD4I	CCNGG	3 cut(s)	667, 724, 759
StyI	CCWWGG	4 cut(s)	595, 606, 789, 1015
TaaI	ACNGT	3 cut(s)	464, 782, 1103
TaqI	TCGA	3 cut(s)	173, 279, 849
TatI	WGTACW	2 cut(s)	1022, 1369
TfiI	GAWTC	1 cut(s)	718
Tru1I	TTAA	3 cut(s)	510, 1139, 1268
Tru9I	TTAA	3 cut(s)	510, 1139, 1268
TscAI	CASTG	4 cut(s)	243, 256, 787, 1108
TseFI	GTSAC	3 cut(s)	673, 976, 1010
TseI	GCWGC	5 cut(s)	503, 737, 968, 1055, 1340
Tsp45I	GTSAC	3 cut(s)	673, 976, 1010
TspDTI	ATGAA	2 cut(s)	513, 562
TspRI	CASTG	4 cut(s)	243, 256, 787, 1108
Tth111I	GACNNNGTC	1 cut(s)	1103
Van91I	CCANNNNNTGG	1 cut(s)	947
VneI	GTGCAC	1 cut(s)	1035
VpaK11BI	GGWCC	3 cut(s)	76, 85, 603
XapI	RAATTY	2 cut(s)	512, 1384
XceI	RCATGY	1 cut(s)	1245
XcmI	CCANNNNNNNNNTGG	1 cut(s)	418
XmiI	GTMKAC	2 cut(s)	402, 1122
XspI	CTAG	6 cut(s)	428, 627, 932, 944, 1262, 1298
ZrmI	AGTACT	1 cut(s)	1024
Zsp2I	ATGCAT	1 cut(s)	1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.