No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07175 AT1G07175 AT2G29995 |
| fragaria_vesca | FvH4_3g38890 FvH4_3g38890 FvH4_3g38891 |
| malus_domestica | MD03G1067000.v1.1 MD11G1071800.v1.1 |
| prunus_persica | Prupe.6G055500_v2.0.a1 |
| pyrus_communis | pycom03g05340 pycom11g05990 |
| rosa_chinensis | RchiOBHm_Chr5g0070101 |
| rosa_roxburghii | Rroxscaffold_1G00011010 Rroxscaffold_1G00011020 |
| rosa_rugosa | Rorug05G0402600 Rorug05G0402700 Rorug05G0402800 |
| rosa_samantha | Rh5AG458900 Rh5AG459000 Rh5BG477600 Rh5CG501200 Rh5CG501300 Rh5DG489500 Rh5DG489600 |
| rosa_wichuraiana | Rw5G042820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 189, 219, 222 |
| AclWI | GGATC | 1 cut(s) | 176 |
| AcoI | YGGCCR | 1 cut(s) | 229 |
| AfaI | GTAC | 1 cut(s) | 16 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 204, 205 |
| Alw26I | GTCTC | 1 cut(s) | 38 |
| AlwI | GGATC | 1 cut(s) | 176 |
| AoxI | GGCC | 1 cut(s) | 229 |
| AsuHPI | GGTGA | 1 cut(s) | 148 |
| BccI | CCATC | 1 cut(s) | 109 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 146, 180 |
| BcoDI | GTCTC | 1 cut(s) | 38 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 237 |
| BisI | GCNGC | 1 cut(s) | 220 |
| BlsI | GCNGC | 1 cut(s) | 221 |
| BpuEI | CTTGAG | 1 cut(s) | 187 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 110, 140 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 204, 205 |
| Bse3DI | GCAATG | 1 cut(s) | 114 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 204, 205 |
| BseMI | GCAATG | 1 cut(s) | 114 |
| BseMII | CTCAG | 1 cut(s) | 99 |
| BshFI | GGCC | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 204, 205 |
| BsmAI | GTCTC | 1 cut(s) | 38 |
| BsnI | GGCC | 1 cut(s) | 231 |
| Bsp143I | GATC | 1 cut(s) | 181 |
| BspACI | CCGC | 3 cut(s) | 189, 219, 222 |
| BspANI | GGCC | 1 cut(s) | 231 |
| BspCNI | CTCAG | 1 cut(s) | 98 |
| BspPI | GGATC | 1 cut(s) | 176 |
| BsrDI | GCAATG | 1 cut(s) | 114 |
| BssMI | GATC | 1 cut(s) | 181 |
| Bst4CI | ACNGT | 1 cut(s) | 76 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 1 cut(s) | 85 |
| BstKTI | GATC | 1 cut(s) | 184 |
| BstMAI | GTCTC | 1 cut(s) | 38 |
| BstMBI | GATC | 1 cut(s) | 181 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 228, 237 |
| BsuRI | GGCC | 1 cut(s) | 231 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 15 |
| CviAII | CATG | 1 cut(s) | 179 |
| CviJI | RGCY | 3 cut(s) | 22, 231, 240 |
| CviKI_1 | RGCY | 3 cut(s) | 22, 231, 240 |
| CviQI | GTAC | 1 cut(s) | 15 |
| DdeI | CTNAG | 1 cut(s) | 85 |
| DpnI | GATC | 1 cut(s) | 183 |
| DpnII | GATC | 1 cut(s) | 181 |
| EaeI | YGGCCR | 1 cut(s) | 229 |
| EciI | GGCGGA | 2 cut(s) | 178, 237 |
| FaeI | CATG | 1 cut(s) | 182 |
| FaiI | YATR | 2 cut(s) | 31, 180 |
| FatI | CATG | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 1 cut(s) | 220 |
| Fsp4HI | GCNGC | 1 cut(s) | 220 |
| GluI | GCNGC | 1 cut(s) | 220 |
| HaeIII | GGCC | 1 cut(s) | 231 |
| Hin1II | CATG | 1 cut(s) | 182 |
| HphI | GGTGA | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 2 cut(s) | 69, 88 |
| Hpy99I | CGWCG | 1 cut(s) | 158 |
| HpyAV | CCTTC | 2 cut(s) | 55, 202 |
| HpyCH4III | ACNGT | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 1 cut(s) | 167 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 228, 237 |
| HpyF3I | CTNAG | 1 cut(s) | 85 |
| Hsp92II | CATG | 1 cut(s) | 182 |
| Kzo9I | GATC | 1 cut(s) | 181 |
| LpnPI | CCDG | 2 cut(s) | 196, 201 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MalI | GATC | 1 cut(s) | 183 |
| MboI | GATC | 1 cut(s) | 181 |
| MboII | GAAGA | 2 cut(s) | 51, 54 |
| MluCI | AATT | 1 cut(s) | 54 |
| MnlI | CCTC | 7 cut(s) | 5, 88, 112, 126, 196, 211, 218 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 228, 237 |
| NdeII | GATC | 1 cut(s) | 181 |
| NlaIII | CATG | 1 cut(s) | 182 |
| NmuCI | GTSAC | 1 cut(s) | 136 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 153 |
| PkrI | GCNGC | 1 cut(s) | 221 |
| RsaI | GTAC | 1 cut(s) | 16 |
| RsaNI | GTAC | 1 cut(s) | 15 |
| SatI | GCNGC | 1 cut(s) | 220 |
| Sau3AI | GATC | 1 cut(s) | 181 |
| SetI | ASST | 5 cut(s) | 16, 99, 128, 215, 229 |
| SmlI | CTYRAG | 1 cut(s) | 202 |
| SmoI | CTYRAG | 1 cut(s) | 202 |
| Sse9I | AATT | 1 cut(s) | 54 |
| SsiI | CCGC | 3 cut(s) | 189, 219, 222 |
| TaaI | ACNGT | 1 cut(s) | 76 |
| TasI | AATT | 1 cut(s) | 54 |
| TauI | GCSGC | 1 cut(s) | 222 |
| TseFI | GTSAC | 1 cut(s) | 136 |
| Tsp45I | GTSAC | 1 cut(s) | 136 |