No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07175 AT1G07175 AT2G29995 |
| fragaria_vesca | FvH4_3g38890 FvH4_3g38890 FvH4_3g38891 |
| malus_domestica | MD03G1067000.v1.1 MD11G1071800.v1.1 |
| prunus_persica | Prupe.6G055500_v2.0.a1 |
| pyrus_communis | pycom03g05340 pycom11g05990 |
| rosa_chinensis | RchiOBHm_Chr5g0070101 |
| rosa_roxburghii | Rroxscaffold_1G00011010 Rroxscaffold_1G00011020 |
| rosa_rugosa | Rorug05G0402600 Rorug05G0402700 Rorug05G0402800 |
| rosa_samantha | Rh5AG458900 Rh5AG459000 Rh5BG477600 Rh5CG501200 Rh5CG501300 Rh5DG489500 Rh5DG489600 |
| rosa_wichuraiana | Rw5G042820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 195, 228 |
| AclWI | GGATC | 1 cut(s) | 179 |
| AcoI | YGGCCR | 2 cut(s) | 108, 229 |
| AfaI | GTAC | 1 cut(s) | 16 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 177 |
| AgsI | TTSAA | 1 cut(s) | 204 |
| AluBI | AGCT | 1 cut(s) | 22 |
| AluI | AGCT | 1 cut(s) | 22 |
| Alw26I | GTCTC | 2 cut(s) | 38, 216 |
| AlwI | GGATC | 1 cut(s) | 179 |
| AoxI | GGCC | 2 cut(s) | 108, 229 |
| AsuHPI | GGTGA | 1 cut(s) | 151 |
| BalI | TGGCCA | 1 cut(s) | 110 |
| BccI | CCATC | 1 cut(s) | 112 |
| BceAI | ACGGC | 1 cut(s) | 241 |
| BcoDI | GTCTC | 2 cut(s) | 38, 216 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 237 |
| BisI | GCNGC | 1 cut(s) | 229 |
| BlsI | GCNGC | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 1 cut(s) | 111 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 113, 143 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 177 |
| BseDI | CCNNGG | 1 cut(s) | 111 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 177 |
| BseMII | CTCAG | 1 cut(s) | 32 |
| BseRI | GAGGAG | 1 cut(s) | 234 |
| BseX3I | CGGCCG | 1 cut(s) | 229 |
| Bsh1285I | CGRYCG | 1 cut(s) | 232 |
| BshFI | GGCC | 2 cut(s) | 110, 231 |
| BsiEI | CGRYCG | 1 cut(s) | 232 |
| BsiSI | CCGG | 1 cut(s) | 232 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 177 |
| BsmAI | GTCTC | 2 cut(s) | 38, 216 |
| BsmBI | CGTCTC | 1 cut(s) | 216 |
| BsnI | GGCC | 2 cut(s) | 110, 231 |
| Bsp143I | GATC | 1 cut(s) | 184 |
| Bsp19I | CCATGG | 1 cut(s) | 111 |
| BspACI | CCGC | 2 cut(s) | 195, 228 |
| BspANI | GGCC | 2 cut(s) | 110, 231 |
| BspCNI | CTCAG | 1 cut(s) | 31 |
| BspPI | GGATC | 1 cut(s) | 179 |
| BssECI | CCNNGG | 1 cut(s) | 111 |
| BssMI | GATC | 1 cut(s) | 184 |
| BssT1I | CCWWGG | 1 cut(s) | 111 |
| Bst6I | CTCTTC | 1 cut(s) | 205 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 1 cut(s) | 18 |
| BstDSI | CCRYGG | 1 cut(s) | 111 |
| BstKTI | GATC | 1 cut(s) | 187 |
| BstMAI | GTCTC | 2 cut(s) | 38, 216 |
| BstMBI | GATC | 1 cut(s) | 184 |
| BstMCI | CGRYCG | 1 cut(s) | 232 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 237 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 118 |
| BstZI | CGGCCG | 1 cut(s) | 229 |
| BsuRI | GGCC | 2 cut(s) | 110, 231 |
| BtgI | CCRYGG | 1 cut(s) | 111 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 15 |
| CviAII | CATG | 2 cut(s) | 112, 182 |
| CviJI | RGCY | 4 cut(s) | 22, 110, 231, 240 |
| CviKI_1 | RGCY | 4 cut(s) | 22, 110, 231, 240 |
| CviQI | GTAC | 1 cut(s) | 15 |
| DdeI | CTNAG | 1 cut(s) | 18 |
| DpnI | GATC | 1 cut(s) | 186 |
| DpnII | GATC | 1 cut(s) | 184 |
| EaeI | YGGCCR | 2 cut(s) | 108, 229 |
| EagI | CGGCCG | 1 cut(s) | 229 |
| Eam1104I | CTCTTC | 1 cut(s) | 205 |
| EarI | CTCTTC | 1 cut(s) | 205 |
| EclXI | CGGCCG | 1 cut(s) | 229 |
| Eco130I | CCWWGG | 1 cut(s) | 111 |
| Eco52I | CGGCCG | 1 cut(s) | 229 |
| EcoT14I | CCWWGG | 1 cut(s) | 111 |
| ErhI | CCWWGG | 1 cut(s) | 111 |
| Esp3I | CGTCTC | 1 cut(s) | 216 |
| FaeI | CATG | 2 cut(s) | 115, 185 |
| FaiI | YATR | 2 cut(s) | 113, 183 |
| FatI | CATG | 2 cut(s) | 111, 181 |
| FauI | CCCGC | 1 cut(s) | 202 |
| Fnu4HI | GCNGC | 1 cut(s) | 229 |
| Fsp4HI | GCNGC | 1 cut(s) | 229 |
| GluI | GCNGC | 1 cut(s) | 229 |
| HaeIII | GGCC | 2 cut(s) | 110, 231 |
| HapII | CCGG | 1 cut(s) | 232 |
| Hin1II | CATG | 2 cut(s) | 115, 185 |
| HinfI | GANTC | 1 cut(s) | 207 |
| HpaII | CCGG | 1 cut(s) | 232 |
| HphI | GGTGA | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 2 cut(s) | 72, 91 |
| Hpy188III | TCNNGA | 2 cut(s) | 204, 216 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 237 |
| HpyF3I | CTNAG | 1 cut(s) | 18 |
| Hsp92II | CATG | 2 cut(s) | 115, 185 |
| Kzo9I | GATC | 1 cut(s) | 184 |
| LpnPI | CCDG | 1 cut(s) | 229 |
| MaeIII | GTNAC | 1 cut(s) | 139 |
| MalI | GATC | 1 cut(s) | 186 |
| MboI | GATC | 1 cut(s) | 184 |
| MboII | GAAGA | 2 cut(s) | 51, 192 |
| MlsI | TGGCCA | 1 cut(s) | 110 |
| MluNI | TGGCCA | 1 cut(s) | 110 |
| MlyI | GAGTC | 1 cut(s) | 216 |
| MnlI | CCTC | 7 cut(s) | 5, 115, 129, 170, 199, 208, 212 |
| Mox20I | TGGCCA | 1 cut(s) | 110 |
| MscI | TGGCCA | 1 cut(s) | 110 |
| MslI | CAYNNNNRTG | 1 cut(s) | 116 |
| Msp20I | TGGCCA | 1 cut(s) | 110 |
| MspA1I | CMGCKG | 1 cut(s) | 22 |
| MspI | CCGG | 1 cut(s) | 232 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 237 |
| NcoI | CCATGG | 1 cut(s) | 111 |
| NdeII | GATC | 1 cut(s) | 184 |
| NlaIII | CATG | 2 cut(s) | 115, 185 |
| NmuCI | GTSAC | 1 cut(s) | 139 |
| PkrI | GCNGC | 1 cut(s) | 230 |
| PleI | GAGTC | 1 cut(s) | 215 |
| PpsI | GAGTC | 1 cut(s) | 215 |
| PvuII | CAGCTG | 1 cut(s) | 22 |
| RsaI | GTAC | 1 cut(s) | 16 |
| RsaNI | GTAC | 1 cut(s) | 15 |
| RseI | CAYNNNNRTG | 1 cut(s) | 116 |
| SatI | GCNGC | 1 cut(s) | 229 |
| Sau3AI | GATC | 1 cut(s) | 184 |
| SchI | GAGTC | 1 cut(s) | 216 |
| SetI | ASST | 3 cut(s) | 16, 24, 131 |
| SgeI | CNNG | 9 cut(s) | 49, 53, 81, 124, 188, 194, 206, 216, 228 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 116 |
| SsiI | CCGC | 2 cut(s) | 195, 228 |
| StyI | CCWWGG | 1 cut(s) | 111 |
| TaqI | TCGA | 1 cut(s) | 175 |
| TauI | GCSGC | 1 cut(s) | 231 |
| TseFI | GTSAC | 1 cut(s) | 139 |
| Tsp45I | GTSAC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 1 cut(s) | 51 |