Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0001314

Physical Location & Seq

Genomic Coordinates Forward (+)

38604096 .. 38611147

Gene Structure 7052 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1270400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGAACCTAATTTGTACTGGATGGTTTTTTATTTTTTCTGCAGGTATAAAGGAGTTTGAGGCAAGGTGGATTGGTTGGGCCGGGGTAAATGTGCCGGATGAAATTGGACAGAAGGCACTTACTAGAGCTCTCGCTGAGAAGAGATGTATCCCAGTTTTTCTTGACGAGGAGATTGTTCATCAATATTACAATGGCTATTGCAATAATATTTTGTGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGACTTGCCACCACCCGGAGTTTCCAGTCACAGTTTGCTGCATATAAGAAGGCAAATCAAATGTTTGCCGACGTGGTTAATGAGCACTACGAAGAGGGTGATGTAGTTTGGGTCCATGATTACCATCTTATGTTTCTTCCAAAATGCTTGAAGGATTACAATAGTAAAATAAAAGTTGGTTGGTTTCTCCACACCCCTTTTCCTTCTTCTGAAATCCATAGGACGTTGCCATCACGATCAGAACTACTCCGTTCAGTTCTTGCAGCTGATTTAGTTGGTTTTCACACTTACGACTATGCACGACACTTTGTTAGTGCTTGCACTCGCATTCTTGGACTTGAGGGCACACCTGAAGGAGTTGAGGATCAAGGAAGGCTTACTCGAGTGGCTGCGTTTCCTATTGGAATAGATTCAGACCGCTTCATACGTGCACTTGATGTTCCTCAAGTACAAGAACACATTAAGGAATTGAAAGAACGGTTCGCTGGGCGAAAGGTAATGCTAGGTGTTGATCGCCTTGATATGATTAAAGGGATTCCTCAGAAGATACTGGCTTTTGAAAAGTTTCTTGAGGAAAACCCAACTTGGCGTGACAAAGTGGTTTTGCTGCAAATTGCGGTGCCAACAAGAACGGATGTTCCAGAGTATCAAAAACTTACAAGCCAGGTTCATGAAATTGTTGGCCGAATAAATGGAAGATTTGGAACTTTGACTGCTGTCCCAATACATCACCTGGATCGTTCTCTTGACTTTCATGCGTTGTGTGCACTATATGCTGTAACTGATATAGCACTTGTCACATCTCTGAGGGACGGAATGAATCTTGTCAGTTATGAGTTTGTGGCATGCCAGGATGCAAAGAGAGGGGTCCTTATTCTTAGTGAGTTTGCTGGTGCCGCACAGTCTTTAGGTGCTGGAGCAATTCTAGTGAACCCGTGGAACATCACAGAGGTTGCCAATTCAATTGCTCAAGCATTGAATATGCCCTCTGAAGAAAGAGAGAAGCGACACAAGCATAATTTTTTACACGTGACAACCCACACTGCACAGGAATGGGCCGAAACTTTTGTAAGTGAACTGAACGATACTGTTGTAGAGGCACAATTACGGACCAGACAGGTGCCGCCACCACTTCCAAACAAGGACGCAATTCAAAGTTATTTGCAAGCAAATAATCGATTGATCATACTGGGATTCAACGTGACATTGACTGAACCGGTGGACACACCTGAGAGACGAGGTGATCAAATAAAAGAAATGGAACTTAAACTGCACCCCGAATTGAAAGAAACCTTGTCAGCACTCGCCAATGATCCGACAACAACTATTGTCGTCATCAGTGGGAGTGACAGATATGTCTTAGATGATAACTTTGGGGAGCTTGATATGTGGTTGGCAGCTGAAAACGGGATGTTTTTACGCCTTACAAAGGGAGAATGGATGACAACAATGCCTGAACATTTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAATATTTCACAGAGAGAACACCACGATCACATTTTGATAAACGTGAAACTTCCCTTGTGTGGAATTATAAATATGCAGATGTTGATTTTGGAAGACTTCAAGCAAGAGATATGCTGCAGCATCTCTGGACTGGCCCGATTTCTAATGCCTCTGTTGATGTTGTTCAAGGTAGCCGGTCTGTTGAGGTTCGAGCAGTTGGTGTGACAAAGGGTGCAGCAATTGACCGTATATTGGGAGAGATAGTTCACAGTAAATCCATGACGTCCCCCATTGATTATGTGCTGTGTATTGGACATTTTCTTGGCAAGGATGAAGATGTGTACACCTTTTTCGAGCCAGATCTTCCGTTTGAGCCGATTGGTCTTCCAAGAACCAAGATATCCGATGGACTAAAACCAAACGAGAGAAGATCTTCTTTGAAGGCTCCGGCAATCAAAGGCGGGTCAAAATCATCTCAGAGCAAGGCGCAACGGCTTGTACCAAACTCTGAGAAGAAAAATGCAAATCATAACACCACGAATCCACGATGGCCATCTCCAGAAAAGATTTCGTGGAACGTACTTGATCTGAAGAAGGAGAACTACTACTCTTGCTCTGTGGGGCGGACTCGCACAAATGCTCGCTATCTACTTCAGTCCTCGGATGATGTTGTCTCGTTTCTGAAGGAACTGGCCGGTGCATCTTCCGCAAGCGTTTCATCTTCCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009311 GO:0009312 GO:0009743 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009987 GO:0010033 GO:0010154 GO:0010182 GO:0016051 GO:0016311 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0033554 GO:0034637 GO:0035251 GO:0042221 GO:0042546 GO:0042578 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044464 GO:0046351 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051716 GO:0061458 GO:0065007 GO:0070413 GO:0070887 GO:0071310 GO:0071322 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

821

Amino Acids

92.79

Weight (kDa)

6.14

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	17 - 445	5.1e-184	Glycosyltransferase family 20
Trehalose_PPase	PF02358	502 - 701	1.2e-59	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78580 AT1G78580 AT1G78580 AT1G78580
fragaria_vesca	FvH4_3g06590 FvH4_3g06590 FvH4_3g17650 FvH4_3g17650
malus_domestica	MD03G1250300.v1.1 MD10G1270400.v1.1 MD11G1270400.v1.1
prunus_persica	Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1
pyrus_communis	pycom03g19800 pycom10g22630 pycom11g23920
rosa_chinensis	RchiOBHm_Chr5g0012561 RchiOBHm_Chr5g0029381
rosa_laevigata	RLG00000031925 RLG00000033160
rosa_multiflora	Rmu_sc0003577.1_g000012 Rmu_sc0004373.1_g000021
rosa_roxburghii	Rroxscaffold_1G00050580 Rroxscaffold_1G00064100
rosa_rugosa	Rorug05G0002400 Rorug05G0002400 Rorug05G0002500 Rorug05G0002600 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000
rosa_samantha	Rh5AG096400 Rh5AG205600 Rh5BG092600 Rh5BG204200 Rh5CG105500 Rh5DG092100 Rh5DG207800
rosa_wichuraiana	Rw5G008440 Rw5G018730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1821
AasI	GACNNNNNNGTC	1 cut(s)	1607
AatII	GACGTC	1 cut(s)	2018
Acc36I	ACCTGC	1 cut(s)	32
AccB1I	GGYRCC	3 cut(s)	871, 1145, 1372
AciI	CCGC	7 cut(s)	670, 869, 1149, 1376, 2193, 2356, 2439
AclWI	GGATC	3 cut(s)	624, 996, 1559
AcoI	YGGCCR	3 cut(s)	934, 2282, 2424
AcuI	CTGAAG	5 cut(s)	624, 1263, 2342, 2369, 2435
AcvI	CACGTG	1 cut(s)	1282
AcyI	GRCGYC	1 cut(s)	2015
AfaI	GTAC	5 cut(s)	16, 702, 2075, 2232, 2313
AfiI	CCNNNNNNNGG	4 cut(s)	267, 1681, 1812, 1984
AflIII	ACRYGT	1 cut(s)	1279
AgeI	ACCGGT	1 cut(s)	1468
AjiI	CACGTC	1 cut(s)	325
AjnI	CCWGG	3 cut(s)	915, 984, 1101
AloI	GAACNNNNNNTCC	4 cut(s)	874, 906, 1980, 2012
AluBI	AGCT	4 cut(s)	128, 518, 1633, 1652
AluI	AGCT	4 cut(s)	128, 518, 1633, 1652
Alw21I	GWGCWC	4 cut(s)	130, 339, 685, 1021
Alw26I	GTCTC	2 cut(s)	1480, 2410
Alw44I	GTGCAC	2 cut(s)	681, 1017
AlwI	GGATC	3 cut(s)	624, 996, 1559
Ama87I	CYCGRG	1 cut(s)	633
AoxI	GGCC	7 cut(s)	78, 215, 934, 1308, 1885, 2282, 2424
ApaLI	GTGCAC	2 cut(s)	681, 1017
ApeKI	GCWGC	8 cut(s)	290, 515, 641, 859, 1649, 1867, 1870, 1967
AsiGI	ACCGGT	1 cut(s)	1468
Asp700I	GAANNNNTTC	3 cut(s)	661, 816, 2164
AspLEI	GCGC	1 cut(s)	2221
AspS9I	GGNCC	7 cut(s)	78, 216, 364, 1120, 1308, 1362, 1886
AsuC2I	CCSGG	2 cut(s)	82, 268
AsuHPI	GGTGA	3 cut(s)	362, 974, 1505
AvaI	CYCGRG	1 cut(s)	633
AvaII	GGWCC	3 cut(s)	364, 1120, 1362
BaeGI	GKGCMC	3 cut(s)	599, 685, 1021
BaeI	ACNNNNGTAYC	2 cut(s)	1329, 1362
BalI	TGGCCA	1 cut(s)	2284
BanI	GGYRCC	3 cut(s)	871, 1145, 1372
BanII	GRGCYC	1 cut(s)	130
BarI	GAAGNNNNNNTAC	2 cut(s)	2318, 2350
BbrPI	CACGTG	1 cut(s)	1282
BbsI	GAAGAC	3 cut(s)	255, 1852, 2108
Bbv12I	GWGCWC	4 cut(s)	130, 339, 685, 1021
BbvI	GCAGC	8 cut(s)	277, 527, 628, 846, 1661, 1854, 1882, 1979
BccI	CCATC	6 cut(s)	15, 384, 490, 2132, 2274, 2293
BceAI	ACGGC	1 cut(s)	2240
BciT130I	CCWGG	3 cut(s)	917, 986, 1103
BciVI	GTATCC	1 cut(s)	158
BclI	TGATCA	2 cut(s)	1434, 1495
BcnI	CCSGG	2 cut(s)	82, 268
BcoDI	GTCTC	2 cut(s)	1480, 2410
BfaI	CTAG	3 cut(s)	123, 755, 1178
BfmI	CTRYAG	2 cut(s)	39, 1868
BfuAI	ACCTGC	1 cut(s)	32
BfuI	GTATCC	1 cut(s)	158
BglII	AGATCT	2 cut(s)	2092, 2162
Bme1390I	CCNGG	5 cut(s)	82, 268, 917, 986, 1103
Bme18I	GGWCC	3 cut(s)	364, 1120, 1362
BmeT110I	CYCGRG	1 cut(s)	633
BmgBI	CACGTC	1 cut(s)	325
BmgT120I	GGNCC	7 cut(s)	78, 216, 364, 1120, 1308, 1362, 1886
BmiI	GGNNCC	7 cut(s)	218, 365, 873, 1121, 1147, 1374, 2178
BmrFI	CCNGG	5 cut(s)	82, 268, 917, 986, 1103
BmrI	ACTGGG	2 cut(s)	146, 1451
BmsI	GCATC	3 cut(s)	1096, 1882, 2441
BmuI	ACTGGG	2 cut(s)	146, 1451
BoxI	GACNNNNGTC	1 cut(s)	968
BpiI	GAAGAC	3 cut(s)	255, 1852, 2108
BpmI	CTGGAG	2 cut(s)	1188, 2274
BpuEI	CTTGAG	4 cut(s)	611, 681, 842, 1206
BpuMI	CCSGG	2 cut(s)	82, 268
Bsa29I	ATCGAT	1 cut(s)	1429
BsaAI	YACGTR	2 cut(s)	680, 1282
BsaBI	GATNNNNATC	2 cut(s)	375, 2284
BsaHI	GRCGYC	1 cut(s)	2015
BsaJI	CCNNGG	4 cut(s)	81, 232, 1187, 2391
BsaWI	WCCGGW	1 cut(s)	1468
BsaXI	ACNNNNNCTCC	2 cut(s)	1980, 2010
Bsc4I	CCNNNNNNNGG	4 cut(s)	267, 1681, 1812, 1984
Bse118I	RCCGGY	3 cut(s)	1468, 1926, 2426
Bse1I	ACTGG	7 cut(s)	22, 152, 277, 807, 1446, 1888, 2427
Bse8I	GATNNNNATC	2 cut(s)	375, 2284
BseBI	CCWGG	3 cut(s)	917, 986, 1103
BseCI	ATCGAT	1 cut(s)	1429
BseDI	CCNNGG	4 cut(s)	81, 232, 1187, 2391
BseGI	GGATG	8 cut(s)	26, 103, 892, 1111, 1668, 1698, 2068, 2401
BseJI	GATNNNNATC	2 cut(s)	375, 2284
BseLI	CCNNNNNNNGG	4 cut(s)	267, 1681, 1812, 1984
BseMII	CTCAG	6 cut(s)	126, 806, 1049, 1473, 2222, 2232
BseNI	ACTGG	7 cut(s)	22, 152, 277, 807, 1446, 1888, 2427
BseRI	GAGGAG	1 cut(s)	182
BseSI	GKGCMC	3 cut(s)	599, 685, 1021
BseXI	GCAGC	8 cut(s)	277, 527, 628, 846, 1661, 1854, 1882, 1979
BseYI	CCCAGC	1 cut(s)	737
BsgI	GTGCAG	3 cut(s)	1281, 1508, 1986
BshFI	GGCC	7 cut(s)	80, 217, 936, 1310, 1887, 2284, 2426
BshNI	GGYRCC	3 cut(s)	871, 1145, 1372
BshTI	ACCGGT	1 cut(s)	1468
BshVI	ATCGAT	1 cut(s)	1429
BsiHKAI	GWGCWC	4 cut(s)	130, 339, 685, 1021
BsiHKCI	CYCGRG	1 cut(s)	633
BsiSI	CCGG	7 cut(s)	81, 95, 268, 1469, 1927, 2180, 2427
BslFI	GGGAC	3 cut(s)	956, 1076, 2002
BslI	CCNNNNNNNGG	4 cut(s)	267, 1681, 1812, 1984
BsmAI	GTCTC	2 cut(s)	1480, 2410
BsmBI	CGTCTC	1 cut(s)	1480
BsmFI	GGGAC	3 cut(s)	956, 1076, 2002
BsmI	GAATGC	1 cut(s)	579
BsnI	GGCC	7 cut(s)	80, 217, 936, 1310, 1887, 2284, 2426
BsoBI	CYCGRG	1 cut(s)	633
Bsp1286I	GDGCHC	5 cut(s)	130, 339, 599, 685, 1021
Bsp1407I	TGTACA	1 cut(s)	2073
BspACI	CCGC	7 cut(s)	670, 869, 1149, 1376, 2193, 2356, 2439
BspANI	GGCC	7 cut(s)	80, 217, 936, 1310, 1887, 2284, 2426
BspCNI	CTCAG	6 cut(s)	127, 805, 1050, 1474, 2221, 2233
BspDI	ATCGAT	1 cut(s)	1429
BspHI	TCATGA	1 cut(s)	922
BspLI	GGNNCC	7 cut(s)	218, 365, 873, 1121, 1147, 1374, 2178
BspMAI	CTGCAG	2 cut(s)	43, 1872
BspMI	ACCTGC	1 cut(s)	32
BspPI	GGATC	3 cut(s)	624, 996, 1559
BspT107I	GGYRCC	3 cut(s)	871, 1145, 1372
BsrFI	RCCGGY	3 cut(s)	1468, 1926, 2426
BsrGI	TGTACA	1 cut(s)	2073
BsrI	ACTGG	7 cut(s)	22, 152, 277, 807, 1446, 1888, 2427
BssAI	RCCGGY	3 cut(s)	1468, 1926, 2426
BssECI	CCNNGG	4 cut(s)	81, 232, 1187, 2391
BssNI	GRCGYC	1 cut(s)	2015
BssT1I	CCWWGG	1 cut(s)	232
Bst2UI	CCWGG	3 cut(s)	917, 986, 1103
Bst4CI	ACNGT	7 cut(s)	285, 732, 1155, 1342, 1736, 1979, 2003
Bst6I	CTCTTC	2 cut(s)	134, 339
BstACI	GRCGYC	1 cut(s)	2015
BstAPI	GCANNNNNTGC	1 cut(s)	1025
BstAUI	TGTACA	1 cut(s)	2073
BstBAI	YACGTR	2 cut(s)	680, 1282
BstC8I	GCNNGC	5 cut(s)	571, 1099, 1419, 2374, 2443
BstDEI	CTNAG	8 cut(s)	135, 792, 1058, 1130, 1482, 1612, 2208, 2241
BstDSI	CCRYGG	1 cut(s)	1187
BstENI	CCTNNNNNAGG	1 cut(s)	1679
BstF5I	GGATG	8 cut(s)	26, 103, 892, 1111, 1668, 1698, 2068, 2401
BstHHI	GCGC	1 cut(s)	2221
BstMAI	GTCTC	2 cut(s)	1480, 2410
BstMWI	GCNNNNNNNGC	5 cut(s)	1016, 1025, 1148, 1264, 2438
BstNI	CCWGG	3 cut(s)	917, 986, 1103
BstNSI	RCATGY	2 cut(s)	1101, 1748
BstPAI	GACNNNNGTC	1 cut(s)	968
BstSCI	CCNGG	5 cut(s)	80, 266, 915, 984, 1101
BstSFI	CTRYAG	2 cut(s)	39, 1868
BstSLI	GKGCMC	3 cut(s)	599, 685, 1021
BstV1I	GCAGC	8 cut(s)	277, 527, 628, 846, 1661, 1854, 1882, 1979
BstV2I	GAAGAC	3 cut(s)	255, 1852, 2108
BstX2I	RGATCY	2 cut(s)	2092, 2162
BstXI	CCANNNNNNTGG	1 cut(s)	233
BstYI	RGATCY	2 cut(s)	2092, 2162
Bsu15I	ATCGAT	1 cut(s)	1429
BsuI	GTATCC	1 cut(s)	158
BsuRI	GGCC	7 cut(s)	80, 217, 936, 1310, 1887, 2284, 2426
BsuTUI	ATCGAT	1 cut(s)	1429
BtgI	CCRYGG	1 cut(s)	1187
BtrI	CACGTC	1 cut(s)	325
BtsCI	GGATG	8 cut(s)	26, 103, 892, 1111, 1668, 1698, 2068, 2401
BtsI	GCAGTG	1 cut(s)	1293
BtsIMutI	CAGTG	3 cut(s)	1293, 1597, 1741
BveI	ACCTGC	1 cut(s)	32
Cac8I	GCNNGC	5 cut(s)	571, 1099, 1419, 2374, 2443
CciI	TCATGA	1 cut(s)	922
CfoI	GCGC	1 cut(s)	2221
Cfr10I	RCCGGY	3 cut(s)	1468, 1926, 2426
Cfr13I	GGNCC	7 cut(s)	78, 216, 364, 1120, 1308, 1362, 1886
ClaI	ATCGAT	1 cut(s)	1429
CseI	GACGC	1 cut(s)	1406
Csp6I	GTAC	5 cut(s)	15, 701, 2074, 2231, 2312
CspAI	ACCGGT	1 cut(s)	1468
CviAII	CATG	6 cut(s)	368, 923, 1007, 1098, 1745, 2011
CviQI	GTAC	5 cut(s)	15, 701, 2074, 2231, 2312
DdeI	CTNAG	8 cut(s)	135, 792, 1058, 1130, 1482, 1612, 2208, 2241
DrdI	GACNNNNNNGTC	1 cut(s)	1607
DseDI	GACNNNNNNGTC	1 cut(s)	1607
EaeI	YGGCCR	3 cut(s)	934, 2282, 2424
Eam1104I	CTCTTC	2 cut(s)	134, 339
EarI	CTCTTC	2 cut(s)	134, 339
EciI	GGCGGA	1 cut(s)	2371
Ecl136II	GAGCTC	1 cut(s)	128
Eco130I	CCWWGG	1 cut(s)	232
Eco24I	GRGCYC	1 cut(s)	130
Eco32I	GATATC	1 cut(s)	2133
Eco47I	GGWCC	3 cut(s)	364, 1120, 1362
Eco53kI	GAGCTC	1 cut(s)	128
Eco57I	CTGAAG	5 cut(s)	624, 1263, 2342, 2369, 2435
Eco72I	CACGTG	1 cut(s)	1282
Eco88I	CYCGRG	1 cut(s)	633
EcoICRI	GAGCTC	1 cut(s)	128
EcoNI	CCTNNNNNAGG	1 cut(s)	1679
EcoO109I	RGGNCCY	1 cut(s)	1120
EcoRII	CCWGG	3 cut(s)	915, 984, 1101
EcoRV	GATATC	1 cut(s)	2133
EcoT14I	CCWWGG	1 cut(s)	232
EcoT38I	GRGCYC	1 cut(s)	130
ErhI	CCWWGG	1 cut(s)	232
Esp3I	CGTCTC	1 cut(s)	1480
FaeI	CATG	6 cut(s)	371, 926, 1010, 1101, 1748, 2014
FalI	AAGNNNNNCTT	6 cut(s)	240, 272, 612, 644, 2152, 2184
FaqI	GGGAC	3 cut(s)	956, 1076, 2002
FatI	CATG	6 cut(s)	367, 922, 1006, 1097, 1744, 2010
FauI	CCCGC	1 cut(s)	2186
FbaI	TGATCA	2 cut(s)	1434, 1495
FokI	GGATG	8 cut(s)	33, 110, 899, 1118, 1675, 1705, 2075, 2408
FriOI	GRGCYC	1 cut(s)	130
FspBI	CTAG	3 cut(s)	123, 755, 1178
GlaI	GCGC	1 cut(s)	2220
GsaI	CCCAGC	1 cut(s)	741
GsuI	CTGGAG	2 cut(s)	1188, 2274
HaeIII	GGCC	7 cut(s)	80, 217, 936, 1310, 1887, 2284, 2426
HapII	CCGG	7 cut(s)	81, 95, 268, 1469, 1927, 2180, 2427
HgaI	GACGC	1 cut(s)	1406
HhaI	GCGC	1 cut(s)	2221
Hin1I	GRCGYC	1 cut(s)	2015
Hin1II	CATG	6 cut(s)	371, 926, 1010, 1101, 1748, 2014
Hin6I	GCGC	1 cut(s)	2219
HinP1I	GCGC	1 cut(s)	2219
HincII	GTYRAC	1 cut(s)	1732
HindII	GTYRAC	1 cut(s)	1732
HinfI	GANTC	6 cut(s)	662, 787, 1072, 1446, 2272, 2359
HpaII	CCGG	7 cut(s)	81, 95, 268, 1469, 1927, 2180, 2427
HphI	GGTGA	3 cut(s)	362, 974, 1505
Hpy166II	GTNNAC	9 cut(s)	683, 1019, 1183, 1328, 1474, 1732, 1999, 2074, 2076
Hpy188III	TCNNGA	8 cut(s)	161, 486, 821, 893, 923, 998, 1879, 2291
Hpy8I	GTNNAC	9 cut(s)	683, 1019, 1183, 1328, 1474, 1732, 1999, 2074, 2076
Hpy99I	CGWCG	1 cut(s)	326
HpyAV	CCTTC	9 cut(s)	106, 295, 397, 465, 599, 618, 2167, 2320, 2410
HpyCH4III	ACNGT	7 cut(s)	285, 732, 1155, 1342, 1736, 1979, 2003
HpyCH4IV	ACGT	8 cut(s)	324, 476, 679, 1281, 1452, 1795, 2015, 2310
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1016, 1025, 1148, 1264, 2438
HpyF3I	CTNAG	8 cut(s)	135, 792, 1058, 1130, 1482, 1612, 2208, 2241
HpySE526I	ACGT	8 cut(s)	324, 476, 679, 1281, 1452, 1795, 2015, 2310
Hsp92I	GRCGYC	1 cut(s)	2015
Hsp92II	CATG	6 cut(s)	371, 926, 1010, 1101, 1748, 2014
HspAI	GCGC	1 cut(s)	2219
Ksp22I	TGATCA	2 cut(s)	1434, 1495
LmnI	GCTCC	3 cut(s)	1169, 1630, 2182
Lsp1109I	GCAGC	8 cut(s)	277, 527, 628, 846, 1661, 1854, 1882, 1979
LweI	GCATC	3 cut(s)	1096, 1882, 2441
MaeI	CTAG	3 cut(s)	123, 755, 1178
MaeII	ACGT	8 cut(s)	324, 476, 679, 1281, 1452, 1795, 2015, 2310
MaeIII	GTNAC	8 cut(s)	279, 842, 1030, 1048, 1282, 1453, 1598, 1954
MfeI	CAATTG	2 cut(s)	1215, 1971
MflI	RGATCY	2 cut(s)	2092, 2162
MhlI	GDGCHC	5 cut(s)	130, 339, 599, 685, 1021
MlsI	TGGCCA	1 cut(s)	2284
MluNI	TGGCCA	1 cut(s)	2284
MlyI	GAGTC	1 cut(s)	2353
MmeI	TCCRAC	1 cut(s)	1592
Mox20I	TGGCCA	1 cut(s)	2284
MroXI	GAANNNNTTC	3 cut(s)	661, 816, 2164
MscI	TGGCCA	1 cut(s)	2284
MseI	TTAA	4 cut(s)	330, 714, 780, 1518
MslI	CAYNNNNRTG	1 cut(s)	1303
Msp20I	TGGCCA	1 cut(s)	2284
MspA1I	CMGCKG	2 cut(s)	518, 1652
MspI	CCGG	7 cut(s)	81, 95, 268, 1469, 1927, 2180, 2427
MspR9I	CCNGG	5 cut(s)	82, 268, 917, 986, 1103
MunI	CAATTG	2 cut(s)	1215, 1971
Mva1269I	GAATGC	1 cut(s)	579
MvaI	CCWGG	3 cut(s)	917, 986, 1103
MwoI	GCNNNNNNNGC	5 cut(s)	1016, 1025, 1148, 1264, 2438
NciI	CCSGG	2 cut(s)	82, 268
NlaIII	CATG	6 cut(s)	371, 926, 1010, 1101, 1748, 2014
NlaIV	GGNNCC	7 cut(s)	218, 365, 873, 1121, 1147, 1374, 2178
NmuCI	GTSAC	7 cut(s)	279, 842, 1048, 1282, 1453, 1598, 1954
NspI	RCATGY	2 cut(s)	1101, 1748
PaeI	GCATGC	1 cut(s)	1101
PaeR7I	CTCGAG	1 cut(s)	633
PagI	TCATGA	1 cut(s)	922
PctI	GAATGC	1 cut(s)	579
PdmI	GAANNNNTTC	3 cut(s)	661, 816, 2164
PfeI	GAWTC	5 cut(s)	662, 787, 1072, 1446, 2272
PinAI	ACCGGT	1 cut(s)	1468
PleI	GAGTC	1 cut(s)	2353
PmaCI	CACGTG	1 cut(s)	1282
PmlI	CACGTG	1 cut(s)	1282
PpsI	GAGTC	1 cut(s)	2353
Ppu21I	YACGTR	2 cut(s)	680, 1282
PpuMI	RGGWCCY	1 cut(s)	1120
PshAI	GACNNNNGTC	1 cut(s)	968
PsiI	TTATAA	1 cut(s)	1821
Psp124BI	GAGCTC	1 cut(s)	130
Psp5II	RGGWCCY	1 cut(s)	1120
Psp6I	CCWGG	3 cut(s)	915, 984, 1101
PspCI	CACGTG	1 cut(s)	1282
PspFI	CCCAGC	1 cut(s)	737
PspGI	CCWGG	3 cut(s)	915, 984, 1101
PspN4I	GGNNCC	7 cut(s)	218, 365, 873, 1121, 1147, 1374, 2178
PspPI	GGNCC	7 cut(s)	78, 216, 364, 1120, 1308, 1362, 1886
PspPPI	RGGWCCY	1 cut(s)	1120
PspXI	VCTCGAGB	1 cut(s)	633
PstI	CTGCAG	2 cut(s)	43, 1872
PsuI	RGATCY	2 cut(s)	2092, 2162
PvuII	CAGCTG	2 cut(s)	518, 1652
RsaI	GTAC	5 cut(s)	16, 702, 2075, 2232, 2313
RsaNI	GTAC	5 cut(s)	15, 701, 2074, 2231, 2312
RseI	CAYNNNNRTG	1 cut(s)	1303
SacI	GAGCTC	1 cut(s)	130
SaqAI	TTAA	4 cut(s)	330, 714, 780, 1518
Sau96I	GGNCC	7 cut(s)	78, 216, 364, 1120, 1308, 1362, 1886
SchI	GAGTC	1 cut(s)	2353
ScrFI	CCNGG	5 cut(s)	82, 268, 917, 986, 1103
SduI	GDGCHC	5 cut(s)	130, 339, 599, 685, 1021
SfaNI	GCATC	3 cut(s)	1096, 1882, 2441
SfcI	CTRYAG	2 cut(s)	39, 1868
Sfr274I	CTCGAG	1 cut(s)	633
SinI	GGWCC	3 cut(s)	364, 1120, 1362
SlaI	CTCGAG	1 cut(s)	633
SmiMI	CAYNNNNRTG	1 cut(s)	1303
SmlI	CTYRAG	5 cut(s)	590, 633, 696, 821, 1221
SmoI	CTYRAG	5 cut(s)	590, 633, 696, 821, 1221
SphI	GCATGC	1 cut(s)	1101
SsiI	CCGC	7 cut(s)	670, 869, 1149, 1376, 2193, 2356, 2439
SspI	AATATT	3 cut(s)	185, 208, 1757
SspMI	CTAG	3 cut(s)	123, 755, 1178
SstI	GAGCTC	1 cut(s)	130
StyD4I	CCNGG	5 cut(s)	80, 266, 915, 984, 1101
StyI	CCWWGG	1 cut(s)	232
TaaI	ACNGT	7 cut(s)	285, 732, 1155, 1342, 1736, 1979, 2003
TaiI	ACGT	8 cut(s)	327, 479, 682, 1284, 1455, 1798, 2018, 2313
TaqI	TCGA	4 cut(s)	634, 1429, 1942, 2085
TaqII	GACCGA	1 cut(s)	267
TatI	WGTACW	3 cut(s)	14, 700, 2073
TauI	GCSGC	2 cut(s)	1151, 1378
TfiI	GAWTC	5 cut(s)	662, 787, 1072, 1446, 2272
Tru1I	TTAA	4 cut(s)	330, 714, 780, 1518
Tru9I	TTAA	4 cut(s)	330, 714, 780, 1518
TscAI	CASTG	3 cut(s)	1300, 1597, 1741
TseFI	GTSAC	7 cut(s)	279, 842, 1048, 1282, 1453, 1598, 1954
TseI	GCWGC	8 cut(s)	290, 515, 641, 859, 1649, 1867, 1870, 1967
Tsp45I	GTSAC	7 cut(s)	279, 842, 1048, 1282, 1453, 1598, 1954
TspGWI	ACGGA	5 cut(s)	491, 899, 1080, 1375, 2088
TspRI	CASTG	3 cut(s)	1300, 1597, 1741
VneI	GTGCAC	2 cut(s)	681, 1017
VpaK11BI	GGWCC	3 cut(s)	364, 1120, 1362
XagI	CCTNNNNNAGG	1 cut(s)	1679
XceI	RCATGY	2 cut(s)	1101, 1748
XhoI	CTCGAG	1 cut(s)	633
XmnI	GAANNNNTTC	3 cut(s)	661, 816, 2164
XspI	CTAG	3 cut(s)	123, 755, 1178
ZraI	GACGTC	1 cut(s)	2016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.