Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0001314

Physical Location & Seq

Genomic Coordinates Forward (+)

26901803 .. 26907198

Gene Structure 5396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g23920.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGCCTGGGAACAAGTACAACAGTAATTCGGACCACATCCCACCAAATCGACTTGAACGGCTCTTGAGAGAAAGGGAGCTAAGGAAAAATAACAAGGGCTTGAACTTGAATGAATCATTTGAGCCTGAGTTGCAGTTAAGAGAAGATGAAAACTCAAAAGCTGCCTATGTTGAACAATTCTTGGAAGGGGCTGCAGCTGCAAGGGCGCTTAATGAGGGATGCGAAAAGCAAGAGCGGAGGCCTAGCAGGCAACGACTGTTGGTTGTGGCTAACAGGTTACCGGTGTCTGCAATTAGGAGAGGCGAAGATTCATGGTCTCTAGAGATGAGTGCAGGGGGTCTGGTCACTGCACTTTTGGGTATAAAGGAGTTTGAGGCAAGGTGGATTGGTTGGGCCGGGGTAAATGTGCCGGATGAAATTGGACAGAAGGCACTTACTAGAGCTCTCGCTGAGAAGAGATGTATCCCAGTTTTTCTTGACGAGGAGATTGTTCATCAATATTACAATGGCTATTGCAATAATATTTTGTGGCCCCTTTTCCATTACCTTGCACTTCCACAAGAAGACCGACTTGCCACCACCCGGAGTTTCCAGTCACAGTTTGCTGCATATAAGAAGGCAAATCAAATGTTTGCCAACGTGGTTAATGAGTACTATGAAGAGGGTGACGTAGTTTGGGTCCATGATTACCATCTTATGTTTCTTCCAAAATGCTTGAAGGATTACAATAGTAAAATAAAAGTTGGTTGGTTTCTCCACACCCCTTTTCCTTCTTCTGAAATCCATAGGACATTGCCTTCACGATCAGAACTACTCCGTTCAGTTCTTGCAGCTGATTTAGTTGGTTTTCACACTTATGACTATGCACGGCACTTTGTTAGTGCTTGCACCCGCATTCTTGGACTTGAGGGCACTCCTGAAGGAGTTGAGGATCAAGGGAGGCTTACTCGAGTGGCTGCGTTTCCTATTGGAATAGATTCAGACCGCTTCATACGTGCACTTGATGTTCCTGATGTCCAAAAACACATTAAGGAATTAAAAGAACGGTTCGCTGGGCGAAAGGTAATGCTAGGTGTTGATCGCCTTGATATGATTAAAGGGATTCCTCAAAAGATACTGGCGTTTGAAAAGTTTCTTGAGGAAAACCCAACTTGGCGTGACAAAGTGGTTTTGCTGCAAATTGCGGTGCCAACAAGAACGGATGTTCCAGAGTATCAAAAACTTACAAGCCAGGTTCATGAAATTGTTGGCCGAATAAACGGAAGATTTGGAACTTTGACTGCTGTCCCAATACATCACCTGGATCGTTCTCTTGACTTTTATGCATTGTGTGCACTATATGCTGTAACTGATATAGCACTTGTGACATCCCTGAGGGACGGAATGAATCTTGTCAGTTATGAGTTTGTGGCATGCCAGGATGCAAAGAGAGGGGTCCTTATTCTGAGTGAGTTTGCTGGTGCCGCACAGTCTTTAGGTGCTGGAGCAATCCTAGTGAACCCGTGGAACATCACAGAAGTTGCCAATTCAATTGCTCAAGCATTGAATATGCCCTCTGAAGAAAGAGAGAAGCGACATAAGCATAATTTTTTACACGTGACAACCCACACTGCACAGGAATGGGCTGAAACGTTTGTAAGTGAACTGAACGATACTGTTATAGAGGCACAATTACGGACCAGACAGGTGCCACCACCACTTCCAAACCAGGACGCAATTCAGAGTTATTTGCAAGCAAATAATCGATTGATCATACTGGTATGGATTCAACGCGACATTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009311 GO:0009312 GO:0009743 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009987 GO:0010033 GO:0010154 GO:0010182 GO:0016051 GO:0016311 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0033554 GO:0034637 GO:0035251 GO:0042221 GO:0042546 GO:0042578 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044464 GO:0046351 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051716 GO:0061458 GO:0065007 GO:0070413 GO:0070887 GO:0071310 GO:0071322 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

595

Amino Acids

67.63

Weight (kDa)

6.31

Isoelectric Point (pI)

52.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78580 AT1G78580 AT1G78580 AT1G78580
fragaria_vesca	FvH4_3g06590 FvH4_3g06590 FvH4_3g17650 FvH4_3g17650
malus_domestica	MD03G1250300.v1.1 MD10G1270400.v1.1 MD11G1270400.v1.1
prunus_persica	Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1
pyrus_communis	pycom03g19800 pycom10g22630 pycom11g23920
rosa_chinensis	RchiOBHm_Chr5g0012561 RchiOBHm_Chr5g0029381
rosa_laevigata	RLG00000031925 RLG00000033160
rosa_multiflora	Rmu_sc0003577.1_g000012 Rmu_sc0004373.1_g000021
rosa_roxburghii	Rroxscaffold_1G00050580 Rroxscaffold_1G00064100
rosa_rugosa	Rorug05G0002400 Rorug05G0002400 Rorug05G0002500 Rorug05G0002600 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000
rosa_samantha	Rh5AG096400 Rh5AG205600 Rh5BG092600 Rh5BG204200 Rh5CG105500 Rh5DG092100 Rh5DG207800
rosa_wichuraiana	Rw5G008440 Rw5G018730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	1186, 1460, 1687
AccBSI	CCGCTC	1 cut(s)	235
AccII	CGCG	1 cut(s)	1773
AciI	CCGC	5 cut(s)	235, 892, 985, 1184, 1464
AclI	AACGTT	1 cut(s)	1631
AclWI	GGATC	2 cut(s)	939, 1311
AcoI	YGGCCR	1 cut(s)	1249
AcuI	CTGAAG	2 cut(s)	939, 1578
AcvI	CACGTG	1 cut(s)	1597
AfaI	GTAC	2 cut(s)	17, 653
AfiI	CCNNNNNNNGG	1 cut(s)	582
AflIII	ACRYGT	1 cut(s)	1594
AgeI	ACCGGT	1 cut(s)	280
AgsI	TTSAA	9 cut(s)	56, 103, 109, 173, 718, 1127, 1530, 1546, 1769
AjnI	CCWGG	5 cut(s)	4, 1230, 1299, 1416, 1707
AloI	GAACNNNNNNTCC	2 cut(s)	1189, 1221
AluBI	AGCT	5 cut(s)	79, 161, 197, 443, 833
AluI	AGCT	5 cut(s)	79, 161, 197, 443, 833
Alw21I	GWGCWC	3 cut(s)	445, 1000, 1336
Alw26I	GTCTC	1 cut(s)	321
Alw44I	GTGCAC	2 cut(s)	996, 1332
AlwI	GGATC	2 cut(s)	939, 1311
Ama87I	CYCGRG	1 cut(s)	948
AoxI	GGCC	4 cut(s)	239, 393, 530, 1249
ApaLI	GTGCAC	2 cut(s)	996, 1332
ApeKI	GCWGC	8 cut(s)	161, 191, 194, 197, 605, 830, 956, 1174
AsiGI	ACCGGT	1 cut(s)	280
Asp700I	GAANNNNTTC	2 cut(s)	976, 1131
AspLEI	GCGC	1 cut(s)	208
AspS9I	GGNCC	6 cut(s)	31, 393, 531, 679, 1435, 1677
AsuC2I	CCSGG	2 cut(s)	397, 583
AsuHPI	GGTGA	2 cut(s)	677, 1289
AvaI	CYCGRG	1 cut(s)	948
AvaII	GGWCC	4 cut(s)	31, 679, 1435, 1677
AxyI	CCTNAGG	1 cut(s)	1373
BaeGI	GKGCMC	3 cut(s)	914, 1000, 1336
BaeI	ACNNNNGTAYC	2 cut(s)	1106, 1139
BanI	GGYRCC	3 cut(s)	1186, 1460, 1687
BanII	GRGCYC	1 cut(s)	445
BbrPI	CACGTG	1 cut(s)	1597
BbsI	GAAGAC	1 cut(s)	570
Bbv12I	GWGCWC	3 cut(s)	445, 1000, 1336
BbvI	GCAGC	8 cut(s)	148, 178, 184, 206, 592, 842, 943, 1161
BccI	CCATC	1 cut(s)	699
BceAI	ACGGC	2 cut(s)	74, 884
BciT130I	CCWGG	5 cut(s)	6, 1232, 1301, 1418, 1709
BciVI	GTATCC	1 cut(s)	473
BclI	TGATCA	1 cut(s)	1749
BcnI	CCSGG	2 cut(s)	397, 583
BcoDI	GTCTC	1 cut(s)	321
BfaI	CTAG	5 cut(s)	243, 320, 438, 1070, 1493
BfmI	CTRYAG	1 cut(s)	192
BfoI	RGCGCY	1 cut(s)	209
BfuI	GTATCC	1 cut(s)	473
BglI	GCCNNNNNGGC	1 cut(s)	247
BisI	GCNGC	9 cut(s)	162, 192, 195, 198, 606, 831, 957, 1175, 1464
BlsI	GCNGC	9 cut(s)	163, 193, 196, 199, 607, 832, 958, 1176, 1465
BmcAI	AGTACT	1 cut(s)	653
Bme1390I	CCNGG	7 cut(s)	6, 397, 583, 1232, 1301, 1418, 1709
Bme18I	GGWCC	4 cut(s)	31, 679, 1435, 1677
BmeT110I	CYCGRG	1 cut(s)	948
BmgT120I	GGNCC	6 cut(s)	31, 393, 531, 679, 1435, 1677
BmiI	GGNNCC	6 cut(s)	533, 680, 1188, 1436, 1462, 1689
BmrFI	CCNGG	7 cut(s)	6, 397, 583, 1232, 1301, 1418, 1709
BmrI	ACTGGG	1 cut(s)	461
BmsI	GCATC	2 cut(s)	209, 1411
BmuI	ACTGGG	1 cut(s)	461
BoxI	GACNNNNGTC	1 cut(s)	1283
BpiI	GAAGAC	1 cut(s)	570
BplI	GAGNNNNNCTC	2 cut(s)	931, 963
BpmI	CTGGAG	1 cut(s)	1503
Bpu10I	CCTNAGC	1 cut(s)	80
BpuEI	CTTGAG	4 cut(s)	85, 926, 1157, 1521
BpuMI	CCSGG	2 cut(s)	397, 583
Bsa29I	ATCGAT	1 cut(s)	1744
BsaAI	YACGTR	2 cut(s)	995, 1597
BsaBI	GATNNNNATC	1 cut(s)	690
BsaI	GGTCTC	1 cut(s)	321
BsaJI	CCNNGG	3 cut(s)	5, 396, 1502
BsaWI	WCCGGW	1 cut(s)	280
Bsc4I	CCNNNNNNNGG	1 cut(s)	582
Bse118I	RCCGGY	1 cut(s)	280
Bse1I	ACTGG	4 cut(s)	467, 592, 1122, 1761
Bse21I	CCTNAGG	1 cut(s)	1373
Bse3DI	GCAATG	1 cut(s)	791
Bse8I	GATNNNNATC	1 cut(s)	690
BseBI	CCWGG	5 cut(s)	6, 1232, 1301, 1418, 1709
BseCI	ATCGAT	1 cut(s)	1744
BseDI	CCNNGG	3 cut(s)	5, 396, 1502
BseGI	GGATG	6 cut(s)	36, 224, 418, 1207, 1367, 1426
BseJI	GATNNNNATC	1 cut(s)	690
BseLI	CCNNNNNNNGG	1 cut(s)	582
BseMI	GCAATG	1 cut(s)	791
BseMII	CTCAG	4 cut(s)	117, 441, 1364, 1436
BseNI	ACTGG	4 cut(s)	467, 592, 1122, 1761
BseRI	GAGGAG	1 cut(s)	497
BseSI	GKGCMC	3 cut(s)	914, 1000, 1336
BseXI	GCAGC	8 cut(s)	148, 178, 184, 206, 592, 842, 943, 1161
BseYI	CCCAGC	1 cut(s)	1052
BsgI	GTGCAG	3 cut(s)	333, 351, 1596
Bsh1236I	CGCG	1 cut(s)	1773
BshFI	GGCC	4 cut(s)	241, 395, 532, 1251
BshNI	GGYRCC	3 cut(s)	1186, 1460, 1687
BshTI	ACCGGT	1 cut(s)	280
BshVI	ATCGAT	1 cut(s)	1744
BsiHKAI	GWGCWC	3 cut(s)	445, 1000, 1336
BsiHKCI	CYCGRG	1 cut(s)	948
BsiSI	CCGG	4 cut(s)	281, 396, 410, 583
BslFI	GGGAC	2 cut(s)	1271, 1391
BslI	CCNNNNNNNGG	1 cut(s)	582
BsmAI	GTCTC	1 cut(s)	321
BsmFI	GGGAC	2 cut(s)	1271, 1391
BsmI	GAATGC	1 cut(s)	894
BsnI	GGCC	4 cut(s)	241, 395, 532, 1251
Bso31I	GGTCTC	1 cut(s)	321
BsoBI	CYCGRG	1 cut(s)	948
Bsp1286I	GDGCHC	4 cut(s)	445, 914, 1000, 1336
Bsp143I	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
BspACI	CCGC	5 cut(s)	235, 892, 985, 1184, 1464
BspANI	GGCC	4 cut(s)	241, 395, 532, 1251
BspCNI	CTCAG	4 cut(s)	118, 442, 1365, 1437
BspDI	ATCGAT	1 cut(s)	1744
BspFNI	CGCG	1 cut(s)	1773
BspHI	TCATGA	1 cut(s)	1237
BspLI	GGNNCC	6 cut(s)	533, 680, 1188, 1436, 1462, 1689
BspMAI	CTGCAG	1 cut(s)	196
BspPI	GGATC	2 cut(s)	939, 1311
BspT107I	GGYRCC	3 cut(s)	1186, 1460, 1687
BspTNI	GGTCTC	1 cut(s)	321
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	1 cut(s)	791
BsrFI	RCCGGY	1 cut(s)	280
BsrI	ACTGG	4 cut(s)	467, 592, 1122, 1761
BssAI	RCCGGY	1 cut(s)	280
BssECI	CCNNGG	3 cut(s)	5, 396, 1502
BssMI	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
Bst2UI	CCWGG	5 cut(s)	6, 1232, 1301, 1418, 1709
Bst4CI	ACNGT	6 cut(s)	23, 258, 600, 1047, 1470, 1657
Bst6I	CTCTTC	2 cut(s)	449, 654
BstAPI	GCANNNNNTGC	2 cut(s)	1331, 1340
BstBAI	YACGTR	2 cut(s)	995, 1597
BstC8I	GCNNGC	4 cut(s)	248, 886, 1414, 1734
BstDEI	CTNAG	5 cut(s)	80, 126, 450, 1373, 1445
BstDSI	CCRYGG	1 cut(s)	1502
BstEII	GGTNACC	1 cut(s)	276
BstF5I	GGATG	6 cut(s)	36, 224, 418, 1207, 1367, 1426
BstFNI	CGCG	1 cut(s)	1773
BstH2I	RGCGCY	1 cut(s)	209
BstHHI	GCGC	1 cut(s)	208
BstKTI	GATC	5 cut(s)	806, 934, 1081, 1306, 1752
BstMAI	GTCTC	1 cut(s)	321
BstMBI	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
BstMWI	GCNNNNNNNGC	8 cut(s)	130, 197, 203, 247, 1331, 1340, 1463, 1579
BstNI	CCWGG	5 cut(s)	6, 1232, 1301, 1418, 1709
BstNSI	RCATGY	1 cut(s)	1416
BstPAI	GACNNNNGTC	1 cut(s)	1283
BstPI	GGTNACC	1 cut(s)	276
BstSCI	CCNGG	7 cut(s)	4, 395, 581, 1230, 1299, 1416, 1707
BstSFI	CTRYAG	1 cut(s)	192
BstSLI	GKGCMC	3 cut(s)	914, 1000, 1336
BstUI	CGCG	1 cut(s)	1773
BstV1I	GCAGC	8 cut(s)	148, 178, 184, 206, 592, 842, 943, 1161
BstV2I	GAAGAC	1 cut(s)	570
Bsu15I	ATCGAT	1 cut(s)	1744
Bsu36I	CCTNAGG	1 cut(s)	1373
BsuI	GTATCC	1 cut(s)	473
BsuRI	GGCC	4 cut(s)	241, 395, 532, 1251
BsuTUI	ATCGAT	1 cut(s)	1744
BtgI	CCRYGG	1 cut(s)	1502
BtsCI	GGATG	6 cut(s)	36, 224, 418, 1207, 1367, 1426
BtsI	GCAGTG	2 cut(s)	345, 1608
BtsIMutI	CAGTG	2 cut(s)	345, 1608
Cac8I	GCNNGC	4 cut(s)	248, 886, 1414, 1734
CciI	TCATGA	1 cut(s)	1237
CfoI	GCGC	1 cut(s)	208
Cfr10I	RCCGGY	1 cut(s)	280
Cfr13I	GGNCC	6 cut(s)	31, 393, 531, 679, 1435, 1677
ClaI	ATCGAT	1 cut(s)	1744
CseI	GACGC	1 cut(s)	1721
Csp6I	GTAC	2 cut(s)	16, 652
CspAI	ACCGGT	1 cut(s)	280
CviAII	CATG	4 cut(s)	312, 683, 1238, 1413
CviQI	GTAC	2 cut(s)	16, 652
DdeI	CTNAG	5 cut(s)	80, 126, 450, 1373, 1445
DpnI	GATC	5 cut(s)	805, 933, 1080, 1305, 1751
DpnII	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
EaeI	YGGCCR	1 cut(s)	1249
Eam1104I	CTCTTC	2 cut(s)	449, 654
EarI	CTCTTC	2 cut(s)	449, 654
Ecl136II	GAGCTC	1 cut(s)	443
Eco147I	AGGCCT	1 cut(s)	241
Eco24I	GRGCYC	1 cut(s)	445
Eco31I	GGTCTC	1 cut(s)	321
Eco47I	GGWCC	4 cut(s)	31, 679, 1435, 1677
Eco53kI	GAGCTC	1 cut(s)	443
Eco57I	CTGAAG	2 cut(s)	939, 1578
Eco72I	CACGTG	1 cut(s)	1597
Eco81I	CCTNAGG	1 cut(s)	1373
Eco88I	CYCGRG	1 cut(s)	948
Eco91I	GGTNACC	1 cut(s)	276
EcoICRI	GAGCTC	1 cut(s)	443
EcoO109I	RGGNCCY	1 cut(s)	1435
EcoO65I	GGTNACC	1 cut(s)	276
EcoRII	CCWGG	5 cut(s)	4, 1230, 1299, 1416, 1707
EcoT22I	ATGCAT	1 cut(s)	1327
EcoT38I	GRGCYC	1 cut(s)	445
FaeI	CATG	4 cut(s)	315, 686, 1241, 1416
FalI	AAGNNNNNCTT	4 cut(s)	555, 587, 927, 959
FaqI	GGGAC	2 cut(s)	1271, 1391
FatI	CATG	4 cut(s)	311, 682, 1237, 1412
FauI	CCCGC	1 cut(s)	899
FbaI	TGATCA	1 cut(s)	1749
Fnu4HI	GCNGC	9 cut(s)	162, 192, 195, 198, 606, 831, 957, 1175, 1464
FokI	GGATG	6 cut(s)	23, 231, 425, 1214, 1354, 1433
FriOI	GRGCYC	1 cut(s)	445
Fsp4HI	GCNGC	9 cut(s)	162, 192, 195, 198, 606, 831, 957, 1175, 1464
FspBI	CTAG	5 cut(s)	243, 320, 438, 1070, 1493
GlaI	GCGC	1 cut(s)	207
GluI	GCNGC	9 cut(s)	162, 192, 195, 198, 606, 831, 957, 1175, 1464
GsaI	CCCAGC	1 cut(s)	1056
GsuI	CTGGAG	1 cut(s)	1503
HaeII	RGCGCY	1 cut(s)	209
HaeIII	GGCC	4 cut(s)	241, 395, 532, 1251
HapII	CCGG	4 cut(s)	281, 396, 410, 583
HgaI	GACGC	1 cut(s)	1721
HhaI	GCGC	1 cut(s)	208
Hin1II	CATG	4 cut(s)	315, 686, 1241, 1416
Hin6I	GCGC	1 cut(s)	206
HinP1I	GCGC	1 cut(s)	206
HinfI	GANTC	6 cut(s)	113, 308, 977, 1102, 1387, 1765
HpaII	CCGG	4 cut(s)	281, 396, 410, 583
HphI	GGTGA	2 cut(s)	677, 1289
Hpy166II	GTNNAC	4 cut(s)	998, 1334, 1498, 1643
Hpy188I	TCNGA	7 cut(s)	31, 778, 808, 982, 1446, 1558, 1722
Hpy8I	GTNNAC	4 cut(s)	998, 1334, 1498, 1643
HpyAV	CCTTC	7 cut(s)	179, 421, 610, 712, 780, 807, 914
HpyCH4III	ACNGT	6 cut(s)	23, 258, 600, 1047, 1470, 1657
HpyCH4IV	ACGT	5 cut(s)	639, 669, 994, 1596, 1631
HpyF10VI	GCNNNNNNNGC	8 cut(s)	130, 197, 203, 247, 1331, 1340, 1463, 1579
HpyF3I	CTNAG	5 cut(s)	80, 126, 450, 1373, 1445
HpySE526I	ACGT	5 cut(s)	639, 669, 994, 1596, 1631
Hsp92II	CATG	4 cut(s)	315, 686, 1241, 1416
HspAI	GCGC	1 cut(s)	206
Ksp22I	TGATCA	1 cut(s)	1749
Kzo9I	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
LmnI	GCTCC	2 cut(s)	76, 1484
Lsp1109I	GCAGC	8 cut(s)	148, 178, 184, 206, 592, 842, 943, 1161
LweI	GCATC	2 cut(s)	209, 1411
MaeI	CTAG	5 cut(s)	243, 320, 438, 1070, 1493
MaeII	ACGT	5 cut(s)	639, 669, 994, 1596, 1631
MaeIII	GTNAC	8 cut(s)	276, 343, 594, 665, 1157, 1345, 1363, 1597
MalI	GATC	5 cut(s)	805, 933, 1080, 1305, 1751
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
MboII	GAAGA	9 cut(s)	155, 317, 466, 575, 671, 695, 765, 1275, 1571
MfeI	CAATTG	1 cut(s)	1530
MhlI	GDGCHC	4 cut(s)	445, 914, 1000, 1336
Mph1103I	ATGCAT	1 cut(s)	1327
MroXI	GAANNNNTTC	2 cut(s)	976, 1131
MseI	TTAA	6 cut(s)	137, 210, 645, 1029, 1037, 1095
MslI	CAYNNNNRTG	2 cut(s)	855, 1618
MspA1I	CMGCKG	2 cut(s)	197, 833
MspI	CCGG	4 cut(s)	281, 396, 410, 583
MspR9I	CCNGG	7 cut(s)	6, 397, 583, 1232, 1301, 1418, 1709
MunI	CAATTG	1 cut(s)	1530
Mva1269I	GAATGC	1 cut(s)	894
MvaI	CCWGG	5 cut(s)	6, 1232, 1301, 1418, 1709
MvnI	CGCG	1 cut(s)	1773
MwoI	GCNNNNNNNGC	8 cut(s)	130, 197, 203, 247, 1331, 1340, 1463, 1579
NciI	CCSGG	2 cut(s)	397, 583
NdeII	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
NlaIII	CATG	4 cut(s)	315, 686, 1241, 1416
NlaIV	GGNNCC	6 cut(s)	533, 680, 1188, 1436, 1462, 1689
NmuCI	GTSAC	6 cut(s)	343, 594, 665, 1157, 1363, 1597
NsiI	ATGCAT	1 cut(s)	1327
NspI	RCATGY	1 cut(s)	1416
PaeI	GCATGC	1 cut(s)	1416
PaeR7I	CTCGAG	1 cut(s)	948
PagI	TCATGA	1 cut(s)	1237
PceI	AGGCCT	1 cut(s)	241
PctI	GAATGC	1 cut(s)	894
PdmI	GAANNNNTTC	2 cut(s)	976, 1131
PfeI	GAWTC	6 cut(s)	113, 308, 977, 1102, 1387, 1765
PinAI	ACCGGT	1 cut(s)	280
PkrI	GCNGC	9 cut(s)	163, 193, 196, 199, 607, 832, 958, 1176, 1465
PmaCI	CACGTG	1 cut(s)	1597
PmlI	CACGTG	1 cut(s)	1597
Ppu21I	YACGTR	2 cut(s)	995, 1597
PpuMI	RGGWCCY	1 cut(s)	1435
PshAI	GACNNNNGTC	1 cut(s)	1283
Psp124BI	GAGCTC	1 cut(s)	445
Psp1406I	AACGTT	1 cut(s)	1631
Psp5II	RGGWCCY	1 cut(s)	1435
Psp6I	CCWGG	5 cut(s)	4, 1230, 1299, 1416, 1707
PspCI	CACGTG	1 cut(s)	1597
PspEI	GGTNACC	1 cut(s)	276
PspFI	CCCAGC	1 cut(s)	1052
PspGI	CCWGG	5 cut(s)	4, 1230, 1299, 1416, 1707
PspN4I	GGNNCC	6 cut(s)	533, 680, 1188, 1436, 1462, 1689
PspPI	GGNCC	6 cut(s)	31, 393, 531, 679, 1435, 1677
PspPPI	RGGWCCY	1 cut(s)	1435
PspXI	VCTCGAGB	1 cut(s)	948
PstI	CTGCAG	1 cut(s)	196
PvuII	CAGCTG	2 cut(s)	197, 833
RsaI	GTAC	2 cut(s)	17, 653
RsaNI	GTAC	2 cut(s)	16, 652
RseI	CAYNNNNRTG	2 cut(s)	855, 1618
SacI	GAGCTC	1 cut(s)	445
SaqAI	TTAA	6 cut(s)	137, 210, 645, 1029, 1037, 1095
SatI	GCNGC	9 cut(s)	162, 192, 195, 198, 606, 831, 957, 1175, 1464
Sau3AI	GATC	5 cut(s)	803, 931, 1078, 1303, 1749
Sau96I	GGNCC	6 cut(s)	31, 393, 531, 679, 1435, 1677
ScaI	AGTACT	1 cut(s)	653
ScrFI	CCNGG	7 cut(s)	6, 397, 583, 1232, 1301, 1418, 1709
SduI	GDGCHC	4 cut(s)	445, 914, 1000, 1336
SfaNI	GCATC	2 cut(s)	209, 1411
SfcI	CTRYAG	1 cut(s)	192
Sfr274I	CTCGAG	1 cut(s)	948
SinI	GGWCC	4 cut(s)	31, 679, 1435, 1677
SlaI	CTCGAG	1 cut(s)	948
SmiMI	CAYNNNNRTG	2 cut(s)	855, 1618
SmlI	CTYRAG	5 cut(s)	64, 905, 948, 1136, 1536
SmoI	CTYRAG	5 cut(s)	64, 905, 948, 1136, 1536
SphI	GCATGC	1 cut(s)	1416
SseBI	AGGCCT	1 cut(s)	241
SsiI	CCGC	5 cut(s)	235, 892, 985, 1184, 1464
SspI	AATATT	2 cut(s)	500, 523
SspMI	CTAG	5 cut(s)	243, 320, 438, 1070, 1493
SstI	GAGCTC	1 cut(s)	445
StuI	AGGCCT	1 cut(s)	241
StyD4I	CCNGG	7 cut(s)	4, 395, 581, 1230, 1299, 1416, 1707
TaaI	ACNGT	6 cut(s)	23, 258, 600, 1047, 1470, 1657
TaiI	ACGT	5 cut(s)	642, 672, 997, 1599, 1634
TaqI	TCGA	3 cut(s)	49, 949, 1744
TaqII	GACCGA	1 cut(s)	582
TatI	WGTACW	2 cut(s)	15, 651
TauI	GCSGC	1 cut(s)	1466
TfiI	GAWTC	6 cut(s)	113, 308, 977, 1102, 1387, 1765
Tru1I	TTAA	6 cut(s)	137, 210, 645, 1029, 1037, 1095
Tru9I	TTAA	6 cut(s)	137, 210, 645, 1029, 1037, 1095
TscAI	CASTG	2 cut(s)	352, 1615
TseFI	GTSAC	6 cut(s)	343, 594, 665, 1157, 1363, 1597
TseI	GCWGC	8 cut(s)	161, 191, 194, 197, 605, 830, 956, 1174
Tsp45I	GTSAC	6 cut(s)	343, 594, 665, 1157, 1363, 1597
TspGWI	ACGGA	5 cut(s)	806, 1214, 1275, 1395, 1690
TspRI	CASTG	2 cut(s)	352, 1615
VneI	GTGCAC	2 cut(s)	996, 1332
VpaK11BI	GGWCC	4 cut(s)	31, 679, 1435, 1677
XbaI	TCTAGA	1 cut(s)	319
XceI	RCATGY	1 cut(s)	1416
XhoI	CTCGAG	1 cut(s)	948
XmnI	GAANNNNTTC	2 cut(s)	976, 1131
XspI	CTAG	5 cut(s)	243, 320, 438, 1070, 1493
ZrmI	AGTACT	1 cut(s)	653
Zsp2I	ATGCAT	1 cut(s)	1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.