Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004373.1

Orthogroup ID

OG0001314

Physical Location & Seq

Genomic Coordinates Forward (+)

93910 .. 101765

Gene Structure 7856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004373.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

atgcctgggaacaagtacaacagtaattcagcccacattccaaatcgaactgaacggctcttgagagaaagggagattaggaagaatagtaaggcatcaccacagttgaatgaagcaaatgataataatagggtaaatctaccatccgagtatgaaagagaagaggaaaactcaagaaatttgtttatcgaagaatacttggaaggggctgcagctgcaagggcccttaatgaggggcatgaaaagcaagaaacaaggcctctcagacagaggctgttggttgtggctaacaggttacccgtctctgctattaggagaggtgaagattcatggtctttggagataagtgctgggggtctggtcactgcccttttgggtgtaaaggagtttgaggcaaggtggattggatgggcaggggtaaatgtgccagatgatattggacagagggcacttactaaagctctggctgaaaagaagtgtatccccgtcttccttgatgaggagattgttcatcaatattacaatggctattgcaacaatattttgtggccccttttccattaccttgggcttccacaagaagatcgacttgctaccactcggagtttccagtcgcagttttctgcatataagaaggcaaatcaaatgtttgcagatgtagttaatgagcactatgaagagggtgatgttgtttggtgccatgactaccatcttatgtttcttccaaaatgcttgaaggaatataacagcaaaatgaaagtcggctggtttcttcacactccctttccttcctctgaaattcataggacactgccatcacgatcagagctcctgcgctcagttcttgcagctgatttagttggttttcacacttatgactatgcacgacactttgttagtgcttgcactcgcattcttgggcttgagggtacgcctgaaggagttgaggatcaagggaggcttactcgagtggctgcgtttcctattggaatagattcagatcgcttcattcgagcacttgaggttcctcaagtccaagaacacattagggaactgaaagagagatttgcagggcgaaaggtaatgttgggtgttgatcggcttgatatgattaaaggaatccctcaaaagatactggcgtttgaaaagtttcttgaggaaaacccaatttggcgtgacaaagtggttttgctgcaaattgcagtgccaacaagaacagatgttcctgagtatcagaaacttacaagtcaggttcatgaaattgttggacgaattaatggcagatttggaagtttgactactgtccctatacatcacctggatcgttctctcgaatttcaagcattatgtgcactgtatgctgttactgacgtagcacttgtcacatccctcagggatggaatgaatcttgttagttatgaatatgtggcatgccaagatgcaaaaaaaggggtccttatccttagtgagtctctaggtgccggagcaattctagtgaacccatggaacatcacagaagttgccaattcaattgcccaagcattgaatatgtcctctgaagagagagagaagcgacataggcataactttgcacatgtgacaacccacactgcccaggaatgggctgaaacttttgtaagtgagctgaatgatactgttgtagaggcgcaaatacggacgagacaggtaccaccaccacttccaaacagggagacaattcaacgttacttgcgagcaaacaatcgattgctcatactgggattcaatgcgactttaactgaaccagtggacacacctgagagacgaggcgatcaaataaaagaaatggaactaaaactgcatccagatttgatagaacccttgacagcactctgcaatgatccaaacacaactattgttgtcctcagtggaagtgacagggctaccttagacgaaaactttttaccatactttggggagcttggcatgtggttggcagctgaaaatggaatgtttttacgtcttacaaagggaggatggatgacaacaatgcctgaactttcaaatatggaatgggtcgaaagtgtgcagcatgtctttgagtattttacagagagaacaccccggtcacacttcgaaagtcgtgaaacttccctcgtgtggaattacaaatatgcagatgttgattttggaagacttcaagcgagagatatgttacagcatctctggactggtccaatttctaatgcatctgttgatgttgttcaaggtagccggtctgtggaggtgcgagcagttggtgtcacaaagggtgcagcaattgaccgtatattgggagaaatagttcacagtaaatccatgacatcccccattgattatgtactgtgcattgggcattttcttgggaaggatgaagatgtgtactcgtttttcgagccagatcccccgactgacaatattggtcttccaagaagcaagataactgacggactaaagtcacctggtgagagaagatcttccttgaagcttccagcaaataaaagtgggtcgaaatcatcgcagagcaagacacaacgacctttaccaaatcctgagaagaaatctgctgtctctgggagtgtaaggtggccatctccagaaaagatttcttggaatgtactagacctcaagaaggagaactactactcttgttctgttgggaggactcgtacaaatgctcgatttctacttcagtcgtcagatgatgttgtctcatttctgaaggaattggctgatgcatcttcagattttcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009311 GO:0009312 GO:0009743 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009987 GO:0010033 GO:0010154 GO:0010182 GO:0016051 GO:0016311 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0033554 GO:0034637 GO:0035251 GO:0042221 GO:0042546 GO:0042578 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044464 GO:0046351 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051716 GO:0061458 GO:0065007 GO:0070413 GO:0070887 GO:0071310 GO:0071322 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

924

Amino Acids

104.75

Weight (kDa)

6.14

Isoelectric Point (pI)

48.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78580 AT1G78580 AT1G78580 AT1G78580
fragaria_vesca	FvH4_3g06590 FvH4_3g06590 FvH4_3g17650 FvH4_3g17650
malus_domestica	MD03G1250300.v1.1 MD10G1270400.v1.1 MD11G1270400.v1.1
prunus_persica	Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1
pyrus_communis	pycom03g19800 pycom10g22630 pycom11g23920
rosa_chinensis	RchiOBHm_Chr5g0012561 RchiOBHm_Chr5g0029381
rosa_laevigata	RLG00000031925 RLG00000033160
rosa_multiflora	Rmu_sc0003577.1_g000012 Rmu_sc0004373.1_g000021
rosa_roxburghii	Rroxscaffold_1G00050580 Rroxscaffold_1G00064100
rosa_rugosa	Rorug05G0002400 Rorug05G0002400 Rorug05G0002500 Rorug05G0002600 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000
rosa_samantha	Rh5AG096400 Rh5AG205600 Rh5BG092600 Rh5BG204200 Rh5CG105500 Rh5DG092100 Rh5DG207800
rosa_wichuraiana	Rw5G008440 Rw5G018730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1687
AccB1I	GGYRCC	3 cut(s)	696, 1478, 1687
AccB7I	CCANNNNNTGG	1 cut(s)	1952
AclI	AACGTT	1 cut(s)	1723
AclWI	GGATC	4 cut(s)	957, 1329, 1874, 2414
AcoI	YGGCCR	1 cut(s)	2606
AcsI	RAATTY	3 cut(s)	178, 798, 1334
AcuI	CTGAAG	5 cut(s)	957, 1578, 2693, 2745, 2759
AdeI	CACNNNGTG	1 cut(s)	2483
AfaI	GTAC	7 cut(s)	17, 931, 1689, 2361, 2402, 2637, 2689
AfiI	CCNNNNNNNGG	9 cut(s)	232, 499, 1620, 1621, 1952, 2139, 2260, 2311, 2650
AflIII	ACRYGT	1 cut(s)	1594
AjnI	CCWGG	4 cut(s)	4, 1317, 1614, 2479
AloI	GAACNNNNNNTCC	4 cut(s)	1207, 1239, 2307, 2339
AluBI	AGCT	8 cut(s)	215, 461, 829, 851, 1645, 1960, 1979, 2506
AluI	AGCT	8 cut(s)	215, 461, 829, 851, 1645, 1960, 1979, 2506
Alw21I	GWGCWC	4 cut(s)	672, 831, 1018, 1354
Alw26I	GTCTC	7 cut(s)	307, 1476, 1675, 1706, 1795, 2593, 2734
Alw44I	GTGCAC	1 cut(s)	1350
AlwI	GGATC	4 cut(s)	957, 1329, 1874, 2414
AlwNI	CAGNNNCTG	1 cut(s)	274
Ama87I	CYCGRG	1 cut(s)	966
AoxI	GGCC	4 cut(s)	222, 257, 548, 2606
ApaI	GGGCCC	1 cut(s)	226
ApaLI	GTGCAC	1 cut(s)	1350
ApeKI	GCWGC	9 cut(s)	209, 212, 215, 848, 974, 1192, 1976, 2068, 2294
ApoI	RAATTY	3 cut(s)	178, 798, 1334
ArsI	GACNNNNNNTTYG	2 cut(s)	744, 776
AseI	ATTAAT	1 cut(s)	1275
Asp700I	GAANNNNTTC	4 cut(s)	994, 1149, 2322, 2494
Asp718I	GGTACC	1 cut(s)	1687
AspLEI	GCGC	2 cut(s)	837, 1669
AspS9I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2213
AsuC2I	CCSGG	1 cut(s)	2104
AsuHPI	GGTGA	6 cut(s)	90, 332, 695, 1307, 2469, 2495
AsuII	TTCGAA	1 cut(s)	2115
AvaI	CYCGRG	1 cut(s)	966
AvaII	GGWCC	2 cut(s)	1453, 2213
AxyI	CCTNAGG	1 cut(s)	1391
BaeGI	GKGCMC	3 cut(s)	226, 451, 1354
BaeI	ACNNNNGTAYC	4 cut(s)	1124, 1157, 1644, 1677
BalI	TGGCCA	1 cut(s)	2608
BanI	GGYRCC	3 cut(s)	696, 1478, 1687
BanII	GRGCYC	2 cut(s)	226, 831
BarI	GAAGNNNNNNTAC	4 cut(s)	1282, 1314, 2642, 2674
BauI	CACGAG	1 cut(s)	2135
BbsI	GAAGAC	3 cut(s)	481, 2179, 2435
Bbv12I	GWGCWC	4 cut(s)	672, 831, 1018, 1354
BbvI	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 1988, 2080, 2306
BccI	CCATC	7 cut(s)	151, 402, 717, 823, 1391, 2010, 2617
BceAI	ACGGC	1 cut(s)	71
BciT130I	CCWGG	4 cut(s)	6, 1319, 1616, 2481
BciVI	GTATCC	1 cut(s)	491
BcnI	CCSGG	1 cut(s)	2104
BcoDI	GTCTC	7 cut(s)	307, 1476, 1675, 1706, 1795, 2593, 2734
BfaI	CTAG	3 cut(s)	1475, 1493, 2639
BfmI	CTRYAG	1 cut(s)	210
BfuI	GTATCC	1 cut(s)	491
BglII	AGATCT	1 cut(s)	2492
BisI	GCNGC	9 cut(s)	210, 213, 216, 849, 975, 1193, 1977, 2069, 2295
BlsI	GCNGC	9 cut(s)	211, 214, 217, 850, 976, 1194, 1978, 2070, 2296
Bme1390I	CCNGG	5 cut(s)	6, 1319, 1616, 2104, 2481
Bme18I	GGWCC	2 cut(s)	1453, 2213
BmeT110I	CYCGRG	1 cut(s)	966
BmgT120I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2213
BmiI	GGNNCC	7 cut(s)	224, 551, 698, 1026, 1454, 1480, 1689
BmrFI	CCNGG	5 cut(s)	6, 1319, 1616, 2104, 2481
BmrI	ACTGGG	1 cut(s)	1766
BmsI	GCATC	7 cut(s)	104, 1429, 1849, 2209, 2237, 2743, 2765
BmuI	ACTGGG	1 cut(s)	1766
BoxI	GACNNNNGTC	2 cut(s)	1301, 2473
BpiI	GAAGAC	3 cut(s)	481, 2179, 2435
BplI	GAGNNNNNCTC	4 cut(s)	155, 187, 949, 981
BpmI	CTGGAG	1 cut(s)	2598
Bpu14I	TTCGAA	1 cut(s)	2115
BpuEI	CTTGAG	7 cut(s)	82, 157, 944, 1014, 1040, 1175, 2630
BpuMI	CCSGG	1 cut(s)	2104
Bsa29I	ATCGAT	1 cut(s)	1744
BsaBI	GATNNNNATC	1 cut(s)	999
BsaJI	CCNNGG	5 cut(s)	5, 565, 1502, 1614, 2102
BsaXI	ACNNNNNCTCC	4 cut(s)	2307, 2337, 2671, 2701
Bsc4I	CCNNNNNNNGG	9 cut(s)	232, 499, 1620, 1621, 1952, 2139, 2260, 2311, 2650
Bse118I	RCCGGY	1 cut(s)	2253
Bse1I	ACTGG	5 cut(s)	610, 1140, 1761, 1784, 2215
Bse21I	CCTNAGG	1 cut(s)	1391
Bse3DI	GCAATG	1 cut(s)	1882
Bse8I	GATNNNNATC	1 cut(s)	999
BseBI	CCWGG	4 cut(s)	6, 1319, 1616, 2481
BseCI	ATCGAT	1 cut(s)	1744
BseDI	CCNNGG	5 cut(s)	5, 565, 1502, 1614, 2102
BseGI	GGATG	9 cut(s)	143, 413, 1385, 1402, 1840, 2021, 2025, 2342, 2395
BseJI	GATNNNNATC	1 cut(s)	999
BseLI	CCNNNNNNNGG	9 cut(s)	232, 499, 1620, 1621, 1952, 2139, 2260, 2311, 2650
BseMI	GCAATG	1 cut(s)	1882
BseMII	CTCAG	7 cut(s)	277, 852, 1218, 1405, 1788, 1918, 2562
BseNI	ACTGG	5 cut(s)	610, 1140, 1761, 1784, 2215
BseRI	GAGGAG	1 cut(s)	515
BseSI	GKGCMC	3 cut(s)	226, 451, 1354
BseXI	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 1988, 2080, 2306
BseYI	CCCAGC	1 cut(s)	350
BsgI	GTGCAG	2 cut(s)	2087, 2313
BshFI	GGCC	4 cut(s)	224, 259, 550, 2608
BshNI	GGYRCC	3 cut(s)	696, 1478, 1687
BshVI	ATCGAT	1 cut(s)	1744
BsiHKAI	GWGCWC	4 cut(s)	672, 831, 1018, 1354
BsiHKCI	CYCGRG	1 cut(s)	966
BsiSI	CCGG	3 cut(s)	1482, 2104, 2254
BslFI	GGGAC	1 cut(s)	1289
BslI	CCNNNNNNNGG	9 cut(s)	232, 499, 1620, 1621, 1952, 2139, 2260, 2311, 2650
BsmAI	GTCTC	7 cut(s)	307, 1476, 1675, 1706, 1795, 2593, 2734
BsmBI	CGTCTC	2 cut(s)	307, 1795
BsmFI	GGGAC	1 cut(s)	1289
BsmI	GAATGC	1 cut(s)	912
BsnI	GGCC	4 cut(s)	224, 259, 550, 2608
BsoBI	CYCGRG	1 cut(s)	966
Bsp119I	TTCGAA	1 cut(s)	2115
Bsp120I	GGGCCC	1 cut(s)	222
Bsp1286I	GDGCHC	6 cut(s)	226, 451, 672, 831, 1018, 1354
Bsp19I	CCATGG	1 cut(s)	1502
BspANI	GGCC	4 cut(s)	224, 259, 550, 2608
BspCNI	CTCAG	7 cut(s)	276, 851, 1219, 1404, 1789, 1917, 2563
BspDI	ATCGAT	1 cut(s)	1744
BspHI	TCATGA	1 cut(s)	1255
BspLI	GGNNCC	7 cut(s)	224, 551, 698, 1026, 1454, 1480, 1689
BspMAI	CTGCAG	1 cut(s)	214
BspPI	GGATC	4 cut(s)	957, 1329, 1874, 2414
BspT104I	TTCGAA	1 cut(s)	2115
BspT107I	GGYRCC	3 cut(s)	696, 1478, 1687
BsrDI	GCAATG	1 cut(s)	1882
BsrFI	RCCGGY	1 cut(s)	2253
BsrI	ACTGG	5 cut(s)	610, 1140, 1761, 1784, 2215
BssAI	RCCGGY	1 cut(s)	2253
BssECI	CCNNGG	5 cut(s)	5, 565, 1502, 1614, 2102
BssSI	CACGAG	1 cut(s)	2135
BssT1I	CCWWGG	2 cut(s)	565, 1502
Bst2BI	CACGAG	1 cut(s)	2135
Bst2UI	CCWGG	4 cut(s)	6, 1319, 1616, 2481
Bst4CI	ACNGT	8 cut(s)	23, 105, 1303, 1356, 1657, 2306, 2330, 2364
Bst6I	CTCTTC	3 cut(s)	156, 672, 1554
BstAPI	GCANNNNNTGC	2 cut(s)	1349, 1358
BstBI	TTCGAA	1 cut(s)	2115
BstC8I	GCNNGC	4 cut(s)	904, 1432, 1734, 2271
BstDEI	CTNAG	9 cut(s)	263, 838, 1227, 1391, 1463, 1797, 1904, 1927, 2571
BstDSI	CCRYGG	1 cut(s)	1502
BstEII	GGTNACC	1 cut(s)	294
BstENI	CCTNNNNNAGG	3 cut(s)	230, 497, 2648
BstF5I	GGATG	9 cut(s)	143, 413, 1385, 1402, 1840, 2021, 2025, 2342, 2395
BstHHI	GCGC	2 cut(s)	837, 1669
BstMAI	GTCTC	7 cut(s)	307, 1476, 1675, 1706, 1795, 2593, 2734
BstMWI	GCNNNNNNNGC	6 cut(s)	215, 221, 244, 1349, 1358, 1579
BstNI	CCWGG	4 cut(s)	6, 1319, 1616, 2481
BstNSI	RCATGY	4 cut(s)	1434, 1598, 1969, 2075
BstPAI	GACNNNNGTC	2 cut(s)	1301, 2473
BstPI	GGTNACC	1 cut(s)	294
BstSCI	CCNGG	5 cut(s)	4, 1317, 1614, 2102, 2479
BstSFI	CTRYAG	1 cut(s)	210
BstSLI	GKGCMC	3 cut(s)	226, 451, 1354
BstV1I	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 1988, 2080, 2306
BstV2I	GAAGAC	3 cut(s)	481, 2179, 2435
BstX2I	RGATCY	2 cut(s)	2419, 2492
BstXI	CCANNNNNNTGG	1 cut(s)	566
BstYI	RGATCY	2 cut(s)	2419, 2492
Bsu15I	ATCGAT	1 cut(s)	1744
Bsu36I	CCTNAGG	1 cut(s)	1391
BsuI	GTATCC	1 cut(s)	491
BsuRI	GGCC	4 cut(s)	224, 259, 550, 2608
BsuTUI	ATCGAT	1 cut(s)	1744
BtgI	CCRYGG	1 cut(s)	1502
BtgZI	GCGATG	1 cut(s)	2520
BtsCI	GGATG	9 cut(s)	143, 413, 1385, 1402, 1840, 2021, 2025, 2342, 2395
BtsI	GCAGTG	4 cut(s)	363, 809, 1209, 1608
BtsIMutI	CAGTG	7 cut(s)	363, 809, 1209, 1352, 1608, 1791, 1912
Cac8I	GCNNGC	4 cut(s)	904, 1432, 1734, 2271
CaiI	CAGNNNCTG	1 cut(s)	274
CciI	TCATGA	1 cut(s)	1255
CfoI	GCGC	2 cut(s)	837, 1669
Cfr10I	RCCGGY	1 cut(s)	2253
Cfr13I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2213
ClaI	ATCGAT	1 cut(s)	1744
CsiI	ACCWGGT	1 cut(s)	2479
Csp6I	GTAC	7 cut(s)	16, 930, 1688, 2360, 2401, 2636, 2688
CviQI	GTAC	7 cut(s)	16, 930, 1688, 2360, 2401, 2636, 2688
DdeI	CTNAG	9 cut(s)	263, 838, 1227, 1391, 1463, 1797, 1904, 1927, 2571
DraIII	CACNNNGTG	1 cut(s)	2483
EaeI	YGGCCR	1 cut(s)	2606
Eam1104I	CTCTTC	3 cut(s)	156, 672, 1554
EarI	CTCTTC	3 cut(s)	156, 672, 1554
Ecl136II	GAGCTC	1 cut(s)	829
Eco130I	CCWWGG	2 cut(s)	565, 1502
Eco147I	AGGCCT	1 cut(s)	259
Eco24I	GRGCYC	2 cut(s)	226, 831
Eco47I	GGWCC	2 cut(s)	1453, 2213
Eco53kI	GAGCTC	1 cut(s)	829
Eco57I	CTGAAG	5 cut(s)	957, 1578, 2693, 2745, 2759
Eco81I	CCTNAGG	1 cut(s)	1391
Eco88I	CYCGRG	1 cut(s)	966
Eco91I	GGTNACC	1 cut(s)	294
EcoICRI	GAGCTC	1 cut(s)	829
EcoNI	CCTNNNNNAGG	3 cut(s)	230, 497, 2648
EcoO109I	RGGNCCY	3 cut(s)	222, 223, 1453
EcoO65I	GGTNACC	1 cut(s)	294
EcoRII	CCWGG	4 cut(s)	4, 1317, 1614, 2479
EcoT14I	CCWWGG	2 cut(s)	565, 1502
EcoT22I	ATGCAT	2 cut(s)	2230, 2758
EcoT38I	GRGCYC	2 cut(s)	226, 831
ErhI	CCWWGG	2 cut(s)	565, 1502
Esp3I	CGTCTC	2 cut(s)	307, 1795
FalI	AAGNNNNNCTT	6 cut(s)	573, 605, 945, 977, 1440, 1472
FaqI	GGGAC	1 cut(s)	1289
Fnu4HI	GCNGC	9 cut(s)	210, 213, 216, 849, 975, 1193, 1977, 2069, 2295
FokI	GGATG	9 cut(s)	130, 420, 1372, 1409, 1827, 2028, 2032, 2329, 2402
FriOI	GRGCYC	2 cut(s)	226, 831
Fsp4HI	GCNGC	9 cut(s)	210, 213, 216, 849, 975, 1193, 1977, 2069, 2295
FspBI	CTAG	3 cut(s)	1475, 1493, 2639
GlaI	GCGC	2 cut(s)	836, 1668
GluI	GCNGC	9 cut(s)	210, 213, 216, 849, 975, 1193, 1977, 2069, 2295
GsaI	CCCAGC	1 cut(s)	354
GsuI	CTGGAG	1 cut(s)	2598
HaeIII	GGCC	4 cut(s)	224, 259, 550, 2608
HapII	CCGG	3 cut(s)	1482, 2104, 2254
HhaI	GCGC	2 cut(s)	837, 1669
Hin6I	GCGC	2 cut(s)	835, 1667
HinP1I	GCGC	2 cut(s)	835, 1667
HindIII	AAGCTT	1 cut(s)	2504
HinfI	GANTC	7 cut(s)	326, 995, 1119, 1405, 1469, 1761, 2683
HpaII	CCGG	3 cut(s)	1482, 2104, 2254
HphI	GGTGA	6 cut(s)	90, 332, 695, 1307, 2469, 2495
Hpy166II	GTNNAC	5 cut(s)	1352, 1498, 1789, 2326, 2401
Hpy8I	GTNNAC	5 cut(s)	1352, 1498, 1789, 2326, 2401
HpyAV	CCTTC	8 cut(s)	197, 628, 730, 798, 932, 2380, 2644, 2734
HpyCH4III	ACNGT	8 cut(s)	23, 105, 1303, 1356, 1657, 2306, 2330, 2364
HpyCH4IV	ACGT	3 cut(s)	1371, 1723, 1999
HpyF10VI	GCNNNNNNNGC	6 cut(s)	215, 221, 244, 1349, 1358, 1579
HpyF3I	CTNAG	9 cut(s)	263, 838, 1227, 1391, 1463, 1797, 1904, 1927, 2571
HpySE526I	ACGT	3 cut(s)	1371, 1723, 1999
HspAI	GCGC	2 cut(s)	835, 1667
KpnI	GGTACC	1 cut(s)	1691
LmnI	GCTCC	3 cut(s)	834, 1484, 1957
Lsp1109I	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 1988, 2080, 2306
LweI	GCATC	7 cut(s)	104, 1429, 1849, 2209, 2237, 2743, 2765
MabI	ACCWGGT	1 cut(s)	2479
MaeI	CTAG	3 cut(s)	1475, 1493, 2639
MaeII	ACGT	3 cut(s)	1371, 1723, 1999
MfeI	CAATTG	2 cut(s)	1530, 2298
MflI	RGATCY	2 cut(s)	2419, 2492
MhlI	GDGCHC	6 cut(s)	226, 451, 672, 831, 1018, 1354
MlsI	TGGCCA	1 cut(s)	2608
MluNI	TGGCCA	1 cut(s)	2608
MlyI	GAGTC	2 cut(s)	1478, 2677
MmeI	TCCRAC	1 cut(s)	1246
Mox20I	TGGCCA	1 cut(s)	2608
Mph1103I	ATGCAT	2 cut(s)	2230, 2758
MroXI	GAANNNNTTC	4 cut(s)	994, 1149, 2322, 2494
MscI	TGGCCA	1 cut(s)	2608
MseI	TTAA	5 cut(s)	228, 663, 1113, 1275, 1775
MslI	CAYNNNNRTG	1 cut(s)	873
Msp20I	TGGCCA	1 cut(s)	2608
MspA1I	CMGCKG	3 cut(s)	215, 851, 1979
MspI	CCGG	3 cut(s)	1482, 2104, 2254
MspR9I	CCNGG	5 cut(s)	6, 1319, 1616, 2104, 2481
MunI	CAATTG	2 cut(s)	1530, 2298
Mva1269I	GAATGC	1 cut(s)	912
MvaI	CCWGG	4 cut(s)	6, 1319, 1616, 2481
MwoI	GCNNNNNNNGC	6 cut(s)	215, 221, 244, 1349, 1358, 1579
NciI	CCSGG	1 cut(s)	2104
NcoI	CCATGG	1 cut(s)	1502
NlaIV	GGNNCC	7 cut(s)	224, 551, 698, 1026, 1454, 1480, 1689
NmuCI	GTSAC	8 cut(s)	361, 1175, 1381, 1597, 1913, 2106, 2281, 2475
NsiI	ATGCAT	2 cut(s)	2230, 2758
NspI	RCATGY	4 cut(s)	1434, 1598, 1969, 2075
NspV	TTCGAA	1 cut(s)	2115
PaeI	GCATGC	1 cut(s)	1434
PaeR7I	CTCGAG	1 cut(s)	966
PagI	TCATGA	1 cut(s)	1255
PceI	AGGCCT	1 cut(s)	259
PciI	ACATGT	1 cut(s)	1594
PcsI	WCGNNNNNNNCGW	2 cut(s)	1009, 1729
PctI	GAATGC	1 cut(s)	912
PdmI	GAANNNNTTC	4 cut(s)	994, 1149, 2322, 2494
PfeI	GAWTC	5 cut(s)	326, 995, 1119, 1405, 1761
PflMI	CCANNNNNTGG	1 cut(s)	1952
PkrI	GCNGC	9 cut(s)	211, 214, 217, 850, 976, 1194, 1978, 2070, 2296
PleI	GAGTC	2 cut(s)	1477, 2677
PpsI	GAGTC	2 cut(s)	1477, 2677
PpuMI	RGGWCCY	1 cut(s)	1453
PscI	ACATGT	1 cut(s)	1594
PshAI	GACNNNNGTC	2 cut(s)	1301, 2473
PshBI	ATTAAT	1 cut(s)	1275
Psp124BI	GAGCTC	1 cut(s)	831
Psp1406I	AACGTT	1 cut(s)	1723
Psp5II	RGGWCCY	1 cut(s)	1453
Psp6I	CCWGG	4 cut(s)	4, 1317, 1614, 2479
PspEI	GGTNACC	1 cut(s)	294
PspFI	CCCAGC	1 cut(s)	350
PspGI	CCWGG	4 cut(s)	4, 1317, 1614, 2479
PspN4I	GGNNCC	7 cut(s)	224, 551, 698, 1026, 1454, 1480, 1689
PspOMI	GGGCCC	1 cut(s)	222
PspPI	GGNCC	5 cut(s)	222, 223, 549, 1453, 2213
PspPPI	RGGWCCY	1 cut(s)	1453
PspXI	VCTCGAGB	1 cut(s)	966
PstI	CTGCAG	1 cut(s)	214
PstNI	CAGNNNCTG	1 cut(s)	274
PsuI	RGATCY	2 cut(s)	2419, 2492
PvuII	CAGCTG	3 cut(s)	215, 851, 1979
RsaI	GTAC	7 cut(s)	17, 931, 1689, 2361, 2402, 2637, 2689
RsaNI	GTAC	7 cut(s)	16, 930, 1688, 2360, 2401, 2636, 2688
RseI	CAYNNNNRTG	1 cut(s)	873
SacI	GAGCTC	1 cut(s)	831
SaqAI	TTAA	5 cut(s)	228, 663, 1113, 1275, 1775
SatI	GCNGC	9 cut(s)	210, 213, 216, 849, 975, 1193, 1977, 2069, 2295
Sau96I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2213
SchI	GAGTC	2 cut(s)	1478, 2677
ScrFI	CCNGG	5 cut(s)	6, 1319, 1616, 2104, 2481
SduI	GDGCHC	6 cut(s)	226, 451, 672, 831, 1018, 1354
SexAI	ACCWGGT	1 cut(s)	2479
SfaNI	GCATC	7 cut(s)	104, 1429, 1849, 2209, 2237, 2743, 2765
SfcI	CTRYAG	1 cut(s)	210
Sfr274I	CTCGAG	1 cut(s)	966
SfuI	TTCGAA	1 cut(s)	2115
SinI	GGWCC	2 cut(s)	1453, 2213
SlaI	CTCGAG	1 cut(s)	966
SmiMI	CAYNNNNRTG	1 cut(s)	873
SmlI	CTYRAG	8 cut(s)	61, 172, 923, 966, 1019, 1029, 1154, 2645
SmoI	CTYRAG	8 cut(s)	61, 172, 923, 966, 1019, 1029, 1154, 2645
SphI	GCATGC	1 cut(s)	1434
SseBI	AGGCCT	1 cut(s)	259
SspI	AATATT	3 cut(s)	518, 541, 2437
SspMI	CTAG	3 cut(s)	1475, 1493, 2639
SstI	GAGCTC	1 cut(s)	831
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	5 cut(s)	4, 1317, 1614, 2102, 2479
StyI	CCWWGG	2 cut(s)	565, 1502
TaaI	ACNGT	8 cut(s)	23, 105, 1303, 1356, 1657, 2306, 2330, 2364
TaiI	ACGT	3 cut(s)	1374, 1726, 2002
TatI	WGTACW	4 cut(s)	15, 2359, 2400, 2635
TfiI	GAWTC	5 cut(s)	326, 995, 1119, 1405, 1761
Tru1I	TTAA	5 cut(s)	228, 663, 1113, 1275, 1775
Tru9I	TTAA	5 cut(s)	228, 663, 1113, 1275, 1775
TscAI	CASTG	7 cut(s)	370, 816, 1209, 1359, 1615, 1791, 1912
TseFI	GTSAC	8 cut(s)	361, 1175, 1381, 1597, 1913, 2106, 2281, 2475
TseI	GCWGC	9 cut(s)	209, 212, 215, 848, 974, 1192, 1976, 2068, 2294
Tsp45I	GTSAC	8 cut(s)	361, 1175, 1381, 1597, 1913, 2106, 2281, 2475
TspGWI	ACGGA	2 cut(s)	1690, 2481
TspRI	CASTG	7 cut(s)	370, 816, 1209, 1359, 1615, 1791, 1912
Van91I	CCANNNNNTGG	1 cut(s)	1952
VneI	GTGCAC	1 cut(s)	1350
VpaK11BI	GGWCC	2 cut(s)	1453, 2213
VspI	ATTAAT	1 cut(s)	1275
XagI	CCTNNNNNAGG	3 cut(s)	230, 497, 2648
XapI	RAATTY	3 cut(s)	178, 798, 1334
XceI	RCATGY	4 cut(s)	1434, 1598, 1969, 2075
XhoI	CTCGAG	1 cut(s)	966
XmnI	GAANNNNTTC	4 cut(s)	994, 1149, 2322, 2494
XspI	CTAG	3 cut(s)	1475, 1493, 2639
Zsp2I	ATGCAT	2 cut(s)	2230, 2758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.