Rroxscaffold_1G00064100

Alpha,alpha-trehalose-phosphate synthase UDP-forming 1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
85937619 .. 85947947
10329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00064100.1

Sequence Viewer

Length: 2931 bp
ATGCCAGGAAACAAGTATAACTGCAATCCCTCCACACCCAGAAGTAGATTGGAAAGGCTTCTCAGGGAAAGAGAGCTAAGGAGATCAAATCTTGCTTCACAACCGAATGAAGATGCAAACAGACATGCAGAACCGAGTGAATATTTTCTTACCGACGGCGAAAATTTAGCTCTCTCTGGTGATGAAGATTTTGCAGATGGGGTTGCAGCAGCAAGAGCTTTTGTTGATGGATGTGAACGACAAGAGGGACGATCTTATAAACAACGGTTATTGGTTGTAGCCAACAGGTTACCTGTCTCTGCAGTTAGGAAGGGTGAAGATTCATGGCAGCTTGAGATAAGTGTAGGAGGGCTAGTGAGTGCACTTTTAGGTGTGAAGGAGTTTGATGCCAGATGGATTGGTTGGGCTGGTGTAAATGTACCTGATAATGTTGGACAAAAAGCACTGACCAAAGCTTTAGCTGAAAAGAGGTGCATCCCTGTGTTTCTTGACGAAGAAATTGTTCATCAATATTACAATGGTTATTGCAACAACATCTTGTGGCCTCTTTTCCACTATCTTGGACTTCCACAAGAAGACCGCCTTGCAACCACCCGGAGTTTCCAATCGCAGTTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTTGTAAATGAACATTACGAGGATGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTTCTTCCTAAATGTCTAAAAGAACATAACAGCAAGATGAAAGTTGGTTGGTTTCTCCATACACCTTTTCCTTCATCAGAAATACATAGGACACTGCCATCTCGATCAGAACTATTGAGATCCGTTCTTGCTGCCGATTTGGTTGGATTCCACACATATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGTATTCTGGGTTTAGAGGGTACACCTGAAGGAGTAGAGGATCAAGGAAAGCTGACTCGTGTAGCTGCGTTTCCAATTGGGATAGACTCGGACCGATTTATTCGAGCTCTAGAACTCCCTCAAGTCCAGGAACACATGAAAGAATTGAAGGAAAGATTTGCTGGCAGAAAGGTAATGTTGGGTGTTGATCGCCTTGATATGATTAAGGGAATTCCTCAAAAGATTTTGGCATTTGAAAAATTCCTTGAGGAAAATCTGAATTGGCGTGATAAAGTAGTCTTGCTGCAAATTGCTGTACCAACAAGAACTGATGTGCCTGAGTACCAGAAGCTCACTAGCCAGGTTCATGAGATTGTGGGACGCATTAACGGGAGGTTTGGAACTCTTACTGCTGTTCCAATACATCATCTGGACCGATCTCTTGACTTTCACGCATTATGTGCACTATATGCTGTTACTGATGTAGCGCTTGTTACATCTTTAAGGGATGGGATGAATCTTGTGAGCTATGAGTTTGTTGCTTGTCAAGCTTCCAAGAAAGGGGTTCTCATTCTAAGCGAGTTTGCAGGTGCAGCACAGTCCCTTGGTGCTGGTGCTATATTGGTGAACCCGTGGAATATCACAGAAGTAGCTGCTTCCATAGGTTATGCTTTGAATATGCCAGCTGATGAAAGGGAAAAGCGTCACCATCATAACTTCATGCATGTAACAACTCACACATCTCAAGAGTGGGCTGCAACCTTTGTAAGTGAACTCAATGATACTATTGTTGAAGCTCAACTAAGAACGAGACAAGTTCCTCCTTTACTTCCTATCAAAGGATCAGTTGATCGCTATTTTCAATCAAGCAATCGATTACTTATACTGGGATTTAATGCCACTTTAACTGAACCAAAGGATACCCTCGGGAGAAGGGGTGGTCAAATTAGAGAAATGGAACTTAAATTACACCCAGATCTCAAGGAACCCTTGAAAAAGCTTTGTGATGACTCAAAGACAACAATTGTTGTCCTTAGTGGAAGTGATAGAAGCGTCTTGGACTATAACTTTGGTGACTACAACATGTGGTTGGCAGCAGAAAATGGGATGTTCTTGCGTCTTACAACTGGAGAATGGATGACAACTATGCCAGAAAATTTAAATATGGATTGGGTTGACAGCGTAAAGCATGTCTTTGAGTATTTCACCGAGAGAACCCCACGATCTCATTTTGAGCTTCGTGAAACCTCACTTGTATGGAACTACAAATATGCAGATATCGAGTTTGGAAGACTCCAAGCCAGGGATCTGCTGCAGCATCTTTGGACAGGCCCAATCTCGAATGCATCTGTCGATGTTGTCCAAGGTGGTCGGTCTGTGGAGGTTCGAGCAGTTGGTGTTACAAAGGGTGCAGCTATTGACCGTATATTAGGAGAAATCGTTCATAACAAAGGCATGAAGGCACCAATTGATTATGTTTTATGTATTGGCCACTTTCTACCAAAGGACGAAGATCTCTATACATTCTTTGAACCAGAGCTTCCTTGTGAGGTACCAGTGCAAACTATTCCTCGACCCACATCAGTACCAACTCCTGTCAACCCGTCTTTGCCCAAGATTTCAACAGGTAAAAGTGGTTCGAAGGGATCCCGCCTTAAGAAGCAACGATCGTTGTCAACTTTAGAAAAGAGAGCTAATATTGGAATTGTGAATGCTTGGAGGCCAACATTAATGCGAGATAGAATGTCTCTGCATGAAGGTTCTTCTGTGCTTGACCTCAAGGGTGACAACTACTTCTCTTGTGCTGTTGGGAGAAAGCGATCCAGTGCAAGATATCTACTTAAATCGTCAGACGATGTCGTTACTCTTTTAAAAGAGCTTGCTGAAGGTGGAGGACCAATGCCTGTCGACTCGGAAAGTGAAGCAATGCCTCTCAACTCAGACGGTGTAGCAGTGCCTCTCGACTCAGGTGTAGCACTGCCTCTCGACTCAGAAGGTGTAGTGCCTCTCAACTCAGAAGTTGGAGAACAAAGCACTGAGAATATCTAG

Protein Analysis

976

Amino Acids

109.37

Weight (kDa)

6.05

Isoelectric Point (pI)

47.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_20 PF00982 89 - 554 2e-189 Glycosyltransferase family 20
Trehalose_PPase PF02358 612 - 811 5.7e-58 Trehalose-phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 258
AarI CACCTGC 1 cut(s) 1460
Acc36I ACCTGC 1 cut(s) 1460
Acc65I GGTACC 1 cut(s) 2434
AccB1I GGYRCC 3 cut(s) 690, 2344, 2434
AccI GTMKAC 1 cut(s) 2790
AciI CCGC 2 cut(s) 580, 2533
AclWI GGATC 7 cut(s) 825, 951, 1732, 2196, 2523, 2536, 2697
AcoI YGGCCR 1 cut(s) 2371
AcsI RAATTY 4 cut(s) 163, 1113, 1142, 2038
AcuI CTGAAG 2 cut(s) 951, 2787
AfaI GTAC 7 cut(s) 420, 901, 925, 1200, 1226, 2436, 2469
AfeI AGCGCT 1 cut(s) 1371
AfiI CCNNNNNNNGG 3 cut(s) 1443, 1721, 2185
AflII CTTAAG 1 cut(s) 2537
AflIII ACRYGT 1 cut(s) 1965
AgsI TTSAA 8 cut(s) 1051, 1139, 1558, 1676, 1745, 1876, 2414, 2505
AjnI CCWGG 4 cut(s) 4, 1029, 1242, 2183
AloI GAACNNNNNNTCC 2 cut(s) 2307, 2339
Alw21I GWGCWC 3 cut(s) 364, 1012, 1348
Alw26I GTCTC 3 cut(s) 301, 1687, 2634
Alw44I GTGCAC 2 cut(s) 360, 1344
AlwI GGATC 7 cut(s) 825, 951, 1732, 2196, 2523, 2536, 2697
Ama87I CYCGRG 1 cut(s) 1808
Aor51HI AGCGCT 1 cut(s) 1371
AoxI GGCC 4 cut(s) 542, 2212, 2371, 2603
ApaLI GTGCAC 2 cut(s) 360, 1344
ApoI RAATTY 4 cut(s) 163, 1113, 1142, 2038
ArsI GACNNNNNNTTYG 2 cut(s) 1934, 1966
AseI ATTAAT 1 cut(s) 2612
Asp700I GAANNNNTTC 4 cut(s) 57, 144, 501, 2322
Asp718I GGTACC 1 cut(s) 2434
AspLEI GCGC 1 cut(s) 1372
AspS9I GGNCC 4 cut(s) 994, 1315, 2213, 2777
AsuC2I CCSGG 1 cut(s) 595
AsuHPI GGTGA 7 cut(s) 191, 326, 1519, 1580, 1967, 2080, 2678
AsuII TTCGAA 1 cut(s) 2522
AvaI CYCGRG 1 cut(s) 1808
AvaII GGWCC 3 cut(s) 994, 1315, 2777
BaeGI GKGCMC 2 cut(s) 364, 1348
BaeI ACNNNNGTAYC 4 cut(s) 1656, 1689, 2451, 2484
BalI TGGCCA 1 cut(s) 2373
BamHI GGATCC 1 cut(s) 2528
BanI GGYRCC 3 cut(s) 690, 2344, 2434
BanII GRGCYC 1 cut(s) 1012
BauI CACGAG 1 cut(s) 960
BbsI GAAGAC 2 cut(s) 582, 2179
Bbv12I GWGCWC 3 cut(s) 364, 1012, 1348
BccI CCATC 7 cut(s) 191, 221, 387, 668, 817, 1385, 1599
BceAI ACGGC 1 cut(s) 172
BciT130I CCWGG 4 cut(s) 6, 1031, 1244, 2185
BciVI GTATCC 1 cut(s) 1795
BcnI CCSGG 1 cut(s) 595
BcoDI GTCTC 3 cut(s) 301, 1687, 2634
BfaI CTAG 4 cut(s) 353, 1013, 1239, 2929
BfmI CTRYAG 2 cut(s) 300, 2195
BfoI RGCGCY 1 cut(s) 1373
BfrI CTTAAG 1 cut(s) 2537
BfuAI ACCTGC 1 cut(s) 1460
BfuI GTATCC 1 cut(s) 1795
BglII AGATCT 2 cut(s) 1858, 2395
Bme1390I CCNGG 5 cut(s) 6, 595, 1031, 1244, 2185
Bme18I GGWCC 3 cut(s) 994, 1315, 2777
BmeT110I CYCGRG 1 cut(s) 1808
BmgT120I GGNCC 4 cut(s) 994, 1315, 2213, 2777
BmiI GGNNCC 5 cut(s) 692, 1869, 2346, 2436, 2530
BmrFI CCNGG 5 cut(s) 6, 595, 1031, 1244, 2185
BmrI ACTGGG 1 cut(s) 1778
BmsI GCATC 6 cut(s) 103, 376, 483, 607, 2209, 2237
BmuI ACTGGG 1 cut(s) 1778
BpiI GAAGAC 2 cut(s) 582, 2179
BpmI CTGGAG 1 cut(s) 2031
Bpu10I CCTNAGC 1 cut(s) 77
Bpu14I TTCGAA 1 cut(s) 2522
BpuEI CTTGAG 6 cut(s) 353, 1008, 1169, 1611, 1847, 2645
BpuMI CCSGG 1 cut(s) 595
Bsa29I ATCGAT 1 cut(s) 1756
BsaJI CCNNGG 5 cut(s) 1486, 1514, 1807, 2184, 2245
BsaXI ACNNNNNCTCC 8 cut(s) 339, 369, 669, 699, 1804, 1834, 2307, 2337
Bsc4I CCNNNNNNNGG 3 cut(s) 1443, 1721, 2185
Bse1I ACTGG 4 cut(s) 1773, 2014, 2438, 2706
Bse3DI GCAATG 1 cut(s) 2814
BseBI CCWGG 4 cut(s) 6, 1031, 1244, 2185
BseCI ATCGAT 1 cut(s) 1756
BseDI CCNNGG 5 cut(s) 1486, 1514, 1807, 2184, 2245
BseGI GGATG 7 cut(s) 236, 474, 679, 1396, 1401, 1995, 2025
BseLI CCNNNNNNNGG 3 cut(s) 1443, 1721, 2185
BseMI GCAATG 1 cut(s) 2814
BseMII CTCAG 7 cut(s) 76, 1212, 2835, 2862, 2886, 2910, 2910
BseNI ACTGG 4 cut(s) 1773, 2014, 2438, 2706
BseSI GKGCMC 2 cut(s) 364, 1348
BsgI GTGCAG 2 cut(s) 1494, 2313
Bsh1285I CGRYCG 1 cut(s) 2552
BshFI GGCC 4 cut(s) 544, 2214, 2373, 2605
BshNI GGYRCC 3 cut(s) 690, 2344, 2434
BshVI ATCGAT 1 cut(s) 1756
BsiEI CGRYCG 1 cut(s) 2552
BsiHKAI GWGCWC 3 cut(s) 364, 1012, 1348
BsiHKCI CYCGRG 1 cut(s) 1808
BsiSI CCGG 1 cut(s) 595
BslFI GGGAC 3 cut(s) 261, 1275, 1468
BslI CCNNNNNNNGG 3 cut(s) 1443, 1721, 2185
BsmAI GTCTC 3 cut(s) 301, 1687, 2634
BsmFI GGGAC 3 cut(s) 261, 1275, 1468
BsmI GAATGC 2 cut(s) 2230, 2599
BsnI GGCC 4 cut(s) 544, 2214, 2373, 2605
BsoBI CYCGRG 1 cut(s) 1808
Bsp119I TTCGAA 1 cut(s) 2522
Bsp1286I GDGCHC 3 cut(s) 364, 1012, 1348
BspACI CCGC 2 cut(s) 580, 2533
BspANI GGCC 4 cut(s) 544, 2214, 2373, 2605
BspCNI CTCAG 7 cut(s) 75, 1213, 2834, 2861, 2885, 2909, 2911
BspDI ATCGAT 1 cut(s) 1756
BspHI TCATGA 1 cut(s) 1249
BspLI GGNNCC 5 cut(s) 692, 1869, 2346, 2436, 2530
BspMAI CTGCAG 2 cut(s) 304, 2199
BspMI ACCTGC 1 cut(s) 1460
BspPI GGATC 7 cut(s) 825, 951, 1732, 2196, 2523, 2536, 2697
BspT104I TTCGAA 1 cut(s) 2522
BspT107I GGYRCC 3 cut(s) 690, 2344, 2434
BspTI CTTAAG 1 cut(s) 2537
BsrDI GCAATG 1 cut(s) 2814
BsrI ACTGG 4 cut(s) 1773, 2014, 2438, 2706
BssECI CCNNGG 5 cut(s) 1486, 1514, 1807, 2184, 2245
BssSI CACGAG 1 cut(s) 960
BssT1I CCWWGG 2 cut(s) 1486, 2245
Bst2BI CACGAG 1 cut(s) 960
Bst2UI CCWGG 4 cut(s) 6, 1031, 1244, 2185
Bst4CI ACNGT 4 cut(s) 267, 1482, 2306, 2828
BstAFI CTTAAG 1 cut(s) 2537
BstAPI GCANNNNNTGC 2 cut(s) 1343, 1352
BstBI TTCGAA 1 cut(s) 2522
BstC8I GCNNGC 3 cut(s) 1066, 1566, 2763
BstDSI CCRYGG 1 cut(s) 1514
BstEII GGTNACC 1 cut(s) 288
BstENI CCTNNNNNAGG 1 cut(s) 1719
BstF5I GGATG 7 cut(s) 236, 474, 679, 1396, 1401, 1995, 2025
BstH2I RGCGCY 1 cut(s) 1373
BstHHI GCGC 1 cut(s) 1372
BstMAI GTCTC 3 cut(s) 301, 1687, 2634
BstMCI CGRYCG 1 cut(s) 2552
BstMWI GCNNNNNNNGC 5 cut(s) 215, 1343, 1352, 1430, 1475
BstNI CCWGG 4 cut(s) 6, 1031, 1244, 2185
BstNSI RCATGY 4 cut(s) 128, 1610, 1969, 2075
BstPI GGTNACC 1 cut(s) 288
BstSCI CCNGG 5 cut(s) 4, 593, 1029, 1242, 2183
BstSFI CTRYAG 2 cut(s) 300, 2195
BstSLI GKGCMC 2 cut(s) 364, 1348
BstV2I GAAGAC 2 cut(s) 582, 2179
BstX2I RGATCY 5 cut(s) 830, 1858, 2188, 2395, 2528
BstXI CCANNNNNNTGG 1 cut(s) 560
BstYI RGATCY 5 cut(s) 830, 1858, 2188, 2395, 2528
Bsu15I ATCGAT 1 cut(s) 1756
BsuI GTATCC 1 cut(s) 1795
BsuRI GGCC 4 cut(s) 544, 2214, 2373, 2605
BsuTUI ATCGAT 1 cut(s) 1756
BtgI CCRYGG 1 cut(s) 1514
BtsCI GGATG 7 cut(s) 236, 474, 679, 1396, 1401, 1995, 2025
BtsI GCAGTG 3 cut(s) 803, 2841, 2858
BtsIMutI CAGTG 7 cut(s) 443, 803, 2445, 2713, 2841, 2858, 2916
BveI ACCTGC 1 cut(s) 1460
Cac8I GCNNGC 3 cut(s) 1066, 1566, 2763
CciI TCATGA 1 cut(s) 1249
CfoI GCGC 1 cut(s) 1372
Cfr13I GGNCC 4 cut(s) 994, 1315, 2213, 2777
ClaI ATCGAT 1 cut(s) 1756
CpoI CGGWCCG 1 cut(s) 994
CseI GACGC 4 cut(s) 1272, 1574, 1924, 1988
Csp6I GTAC 7 cut(s) 419, 900, 924, 1199, 1225, 2435, 2468
CspI CGGWCCG 1 cut(s) 994
CviQI GTAC 7 cut(s) 419, 900, 924, 1199, 1225, 2435, 2468
DraI TTTAAA 2 cut(s) 2043, 2754
EaeI YGGCCR 1 cut(s) 2371
Ecl136II GAGCTC 1 cut(s) 1010
Eco130I CCWWGG 2 cut(s) 1486, 2245
Eco24I GRGCYC 1 cut(s) 1012
Eco32I GATATC 2 cut(s) 2161, 2717
Eco47I GGWCC 3 cut(s) 994, 1315, 2777
Eco47III AGCGCT 1 cut(s) 1371
Eco53kI GAGCTC 1 cut(s) 1010
Eco57I CTGAAG 2 cut(s) 951, 2787
Eco88I CYCGRG 1 cut(s) 1808
Eco91I GGTNACC 1 cut(s) 288
EcoICRI GAGCTC 1 cut(s) 1010
EcoNI CCTNNNNNAGG 1 cut(s) 1719
EcoO65I GGTNACC 1 cut(s) 288
EcoRI GAATTC 1 cut(s) 1113
EcoRII CCWGG 4 cut(s) 4, 1029, 1242, 2183
EcoRV GATATC 2 cut(s) 2161, 2717
EcoT14I CCWWGG 2 cut(s) 1486, 2245
EcoT22I ATGCAT 3 cut(s) 622, 1608, 2230
EcoT38I GRGCYC 1 cut(s) 1012
ErhI CCWWGG 2 cut(s) 1486, 2245
FalI AAGNNNNNCTT 6 cut(s) 567, 599, 1856, 1888, 2060, 2092
FaqI GGGAC 3 cut(s) 261, 1275, 1468
FauI CCCGC 1 cut(s) 2540
FauNDI CATATG 1 cut(s) 868
FblI GTMKAC 1 cut(s) 2790
FokI GGATG 7 cut(s) 243, 461, 686, 1403, 1408, 2002, 2032
FriOI GRGCYC 1 cut(s) 1012
FspBI CTAG 4 cut(s) 353, 1013, 1239, 2929
GlaI GCGC 1 cut(s) 1371
GsuI CTGGAG 1 cut(s) 2031
HaeII RGCGCY 1 cut(s) 1373
HaeIII GGCC 4 cut(s) 544, 2214, 2373, 2605
HapII CCGG 1 cut(s) 595
HgaI GACGC 4 cut(s) 1272, 1574, 1924, 1988
HhaI GCGC 1 cut(s) 1372
Hin6I GCGC 1 cut(s) 1370
HinP1I GCGC 1 cut(s) 1370
HincII GTYRAC 4 cut(s) 2059, 2482, 2559, 2791
HindII GTYRAC 4 cut(s) 2059, 2482, 2559, 2791
HindIII AAGCTT 3 cut(s) 453, 1431, 1880
HpaII CCGG 1 cut(s) 595
HphI GGTGA 7 cut(s) 191, 326, 1519, 1580, 1967, 2080, 2678
Hpy188I TCNGA 9 cut(s) 790, 820, 994, 1161, 2734, 2797, 2824, 2875, 2899
Hpy99I CGWCG 1 cut(s) 158
HpyCH4III ACNGT 4 cut(s) 267, 1482, 2306, 2828
HpyF10VI GCNNNNNNNGC 5 cut(s) 215, 1343, 1352, 1430, 1475
HspAI GCGC 1 cut(s) 1370
KpnI GGTACC 1 cut(s) 2438
LweI GCATC 6 cut(s) 103, 376, 483, 607, 2209, 2237
MaeI CTAG 4 cut(s) 353, 1013, 1239, 2929
MaeIII GTNAC 9 cut(s) 288, 1357, 1375, 1586, 1609, 1955, 2281, 2666, 2743
MboII GAAGA 9 cut(s) 122, 197, 329, 506, 587, 707, 2184, 2405, 2637
MfeI CAATTG 3 cut(s) 978, 1905, 2349
MflI RGATCY 5 cut(s) 830, 1858, 2188, 2395, 2528
MhlI GDGCHC 3 cut(s) 364, 1012, 1348
MlsI TGGCCA 1 cut(s) 2373
MluNI TGGCCA 1 cut(s) 2373
MlyI GAGTC 7 cut(s) 952, 983, 1886, 2169, 2786, 2840, 2864
MmeI TCCRAC 3 cut(s) 412, 835, 2884
Mox20I TGGCCA 1 cut(s) 2373
Mph1103I ATGCAT 3 cut(s) 622, 1608, 2230
MroXI GAANNNNTTC 4 cut(s) 57, 144, 501, 2322
MscI TGGCCA 1 cut(s) 2373
MslI CAYNNNNRTG 3 cut(s) 479, 867, 2137
Msp20I TGGCCA 1 cut(s) 2373
MspA1I CMGCKG 1 cut(s) 1568
MspCI CTTAAG 1 cut(s) 2537
MspI CCGG 1 cut(s) 595
MspR9I CCNGG 5 cut(s) 6, 595, 1031, 1244, 2185
MunI CAATTG 3 cut(s) 978, 1905, 2349
Mva1269I GAATGC 2 cut(s) 2230, 2599
MvaI CCWGG 4 cut(s) 6, 1031, 1244, 2185
MwoI GCNNNNNNNGC 5 cut(s) 215, 1343, 1352, 1430, 1475
NciI CCSGG 1 cut(s) 595
NdeI CATATG 1 cut(s) 868
NlaIV GGNNCC 5 cut(s) 692, 1869, 2346, 2436, 2530
NmuCI GTSAC 3 cut(s) 1586, 1955, 2666
NsiI ATGCAT 3 cut(s) 622, 1608, 2230
NspI RCATGY 4 cut(s) 128, 1610, 1969, 2075
NspV TTCGAA 1 cut(s) 2522
PagI TCATGA 1 cut(s) 1249
PaqCI CACCTGC 1 cut(s) 1460
PciI ACATGT 1 cut(s) 1965
PctI GAATGC 2 cut(s) 2230, 2599
PdmI GAANNNNTTC 4 cut(s) 57, 144, 501, 2322
PfeI GAWTC 3 cut(s) 320, 858, 1399
PflFI GACNNNGTC 1 cut(s) 2738
PfoI TCCNGGA 1 cut(s) 1029
Ple19I CGATCG 1 cut(s) 2552
PleI GAGTC 7 cut(s) 952, 983, 1886, 2169, 2786, 2840, 2864
PpsI GAGTC 7 cut(s) 952, 983, 1886, 2169, 2786, 2840, 2864
PscI ACATGT 1 cut(s) 1965
PshBI ATTAAT 1 cut(s) 2612
PsiI TTATAA 1 cut(s) 258
Psp124BI GAGCTC 1 cut(s) 1012
Psp6I CCWGG 4 cut(s) 4, 1029, 1242, 2183
PspEI GGTNACC 1 cut(s) 288
PspGI CCWGG 4 cut(s) 4, 1029, 1242, 2183
PspN4I GGNNCC 5 cut(s) 692, 1869, 2346, 2436, 2530
PspPI GGNCC 4 cut(s) 994, 1315, 2213, 2777
PsrI GAACNNNNNNTAC 4 cut(s) 1833, 1865, 2503, 2535
PstI CTGCAG 2 cut(s) 304, 2199
PsuI RGATCY 5 cut(s) 830, 1858, 2188, 2395, 2528
PsyI GACNNNGTC 1 cut(s) 2738
PvuI CGATCG 1 cut(s) 2552
PvuII CAGCTG 1 cut(s) 1568
RsaI GTAC 7 cut(s) 420, 901, 925, 1200, 1226, 2436, 2469
RsaNI GTAC 7 cut(s) 419, 900, 924, 1199, 1225, 2435, 2468
RseI CAYNNNNRTG 3 cut(s) 479, 867, 2137
Rsr2I CGGWCCG 1 cut(s) 994
RsrII CGGWCCG 1 cut(s) 994
SacI GAGCTC 1 cut(s) 1012
SalI GTCGAC 1 cut(s) 2789
Sau96I GGNCC 4 cut(s) 994, 1315, 2213, 2777
SchI GAGTC 7 cut(s) 952, 983, 1886, 2169, 2786, 2840, 2864
ScrFI CCNGG 5 cut(s) 6, 595, 1031, 1244, 2185
SduI GDGCHC 3 cut(s) 364, 1012, 1348
SfaNI GCATC 6 cut(s) 103, 376, 483, 607, 2209, 2237
SfcI CTRYAG 2 cut(s) 300, 2195
SfuI TTCGAA 1 cut(s) 2522
SinI GGWCC 3 cut(s) 994, 1315, 2777
SmiI ATTTAAAT 1 cut(s) 2043
SmiMI CAYNNNNRTG 3 cut(s) 479, 867, 2137
SmlI CTYRAG 7 cut(s) 332, 1023, 1148, 1626, 1862, 2537, 2660
SmoI CTYRAG 7 cut(s) 332, 1023, 1148, 1626, 1862, 2537, 2660
SsiI CCGC 2 cut(s) 580, 2533
SspI AATATT 3 cut(s) 143, 512, 2581
SspMI CTAG 4 cut(s) 353, 1013, 1239, 2929
SstI GAGCTC 1 cut(s) 1012
StyD4I CCNGG 5 cut(s) 4, 593, 1029, 1242, 2183
StyI CCWWGG 2 cut(s) 1486, 2245
SwaI ATTTAAAT 1 cut(s) 2043
TaaI ACNGT 4 cut(s) 267, 1482, 2306, 2828
TaqII GACCGA 3 cut(s) 1011, 1332, 2244
TatI WGTACW 1 cut(s) 899
TfiI GAWTC 3 cut(s) 320, 858, 1399
TscAI CASTG 7 cut(s) 450, 810, 2445, 2713, 2841, 2865, 2923
TseFI GTSAC 3 cut(s) 1586, 1955, 2666
Tsp45I GTSAC 3 cut(s) 1586, 1955, 2666
TspGWI ACGGA 1 cut(s) 823
TspRI CASTG 7 cut(s) 450, 810, 2445, 2713, 2841, 2865, 2923
Tth111I GACNNNGTC 1 cut(s) 2738
Vha464I CTTAAG 1 cut(s) 2537
VneI GTGCAC 2 cut(s) 360, 1344
VpaK11BI GGWCC 3 cut(s) 994, 1315, 2777
VspI ATTAAT 1 cut(s) 2612
XagI CCTNNNNNAGG 1 cut(s) 1719
XapI RAATTY 4 cut(s) 163, 1113, 1142, 2038
XbaI TCTAGA 1 cut(s) 1012
XceI RCATGY 4 cut(s) 128, 1610, 1969, 2075
XcmI CCANNNNNNNNNTGG 1 cut(s) 46
XmiI GTMKAC 1 cut(s) 2790
XmnI GAANNNNTTC 4 cut(s) 57, 144, 501, 2322
XspI CTAG 4 cut(s) 353, 1013, 1239, 2929
Zsp2I ATGCAT 3 cut(s) 622, 1608, 2230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.