Alpha,alpha-trehalose-phosphate synthase UDP-forming 1-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 258 |
| AarI | CACCTGC | 1 cut(s) | 1460 |
| Acc36I | ACCTGC | 1 cut(s) | 1460 |
| Acc65I | GGTACC | 1 cut(s) | 2434 |
| AccB1I | GGYRCC | 3 cut(s) | 690, 2344, 2434 |
| AccII | CGCG | 1 cut(s) | 2619 |
| AciI | CCGC | 2 cut(s) | 580, 2533 |
| AclI | AACGTT | 1 cut(s) | 2548 |
| AclWI | GGATC | 7 cut(s) | 825, 951, 1732, 2196, 2523, 2536, 2697 |
| AcoI | YGGCCR | 1 cut(s) | 2371 |
| AcsI | RAATTY | 4 cut(s) | 163, 1113, 1142, 2038 |
| AcuI | CTGAAG | 2 cut(s) | 951, 2787 |
| AfaI | GTAC | 7 cut(s) | 420, 901, 925, 1200, 1226, 2436, 2469 |
| AfeI | AGCGCT | 1 cut(s) | 1371 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1443, 1721, 2185 |
| AflII | CTTAAG | 1 cut(s) | 2537 |
| AflIII | ACRYGT | 1 cut(s) | 1965 |
| AgsI | TTSAA | 8 cut(s) | 1051, 1139, 1558, 1676, 1745, 1876, 2414, 2505 |
| AjnI | CCWGG | 5 cut(s) | 4, 323, 1029, 1242, 2183 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2307, 2339 |
| Alw21I | GWGCWC | 4 cut(s) | 364, 1012, 1348, 2921 |
| Alw26I | GTCTC | 3 cut(s) | 301, 2634, 2797 |
| Alw44I | GTGCAC | 2 cut(s) | 360, 1344 |
| AlwI | GGATC | 7 cut(s) | 825, 951, 1732, 2196, 2523, 2536, 2697 |
| Aor51HI | AGCGCT | 1 cut(s) | 1371 |
| AoxI | GGCC | 4 cut(s) | 542, 2212, 2371, 2603 |
| ApaLI | GTGCAC | 2 cut(s) | 360, 1344 |
| ApoI | RAATTY | 4 cut(s) | 163, 1113, 1142, 2038 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1934, 1966 |
| AseI | ATTAAT | 2 cut(s) | 1269, 2612 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 57, 144, 501, 2322 |
| Asp718I | GGTACC | 1 cut(s) | 2434 |
| AspLEI | GCGC | 2 cut(s) | 1372, 2619 |
| AspS9I | GGNCC | 4 cut(s) | 994, 1315, 1689, 2213 |
| AsuC2I | CCSGG | 1 cut(s) | 595 |
| AsuHPI | GGTGA | 7 cut(s) | 191, 326, 1519, 1580, 1967, 2080, 2678 |
| AsuII | TTCGAA | 1 cut(s) | 2522 |
| AvaII | GGWCC | 3 cut(s) | 994, 1315, 1689 |
| BaeGI | GKGCMC | 2 cut(s) | 364, 1348 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1656, 1689, 2451, 2484 |
| BalI | TGGCCA | 1 cut(s) | 2373 |
| BamHI | GGATCC | 1 cut(s) | 2528 |
| BanI | GGYRCC | 3 cut(s) | 690, 2344, 2434 |
| BanII | GRGCYC | 1 cut(s) | 1012 |
| BauI | CACGAG | 1 cut(s) | 960 |
| BbsI | GAAGAC | 3 cut(s) | 324, 582, 2179 |
| Bbv12I | GWGCWC | 4 cut(s) | 364, 1012, 1348, 2921 |
| BccI | CCATC | 7 cut(s) | 191, 221, 387, 668, 817, 1385, 1599 |
| BceAI | ACGGC | 2 cut(s) | 172, 254 |
| BciT130I | CCWGG | 5 cut(s) | 6, 325, 1031, 1244, 2185 |
| BciVI | GTATCC | 1 cut(s) | 1795 |
| BcnI | CCSGG | 1 cut(s) | 595 |
| BcoDI | GTCTC | 3 cut(s) | 301, 2634, 2797 |
| BfaI | CTAG | 5 cut(s) | 353, 1013, 1239, 2786, 2932 |
| BfmI | CTRYAG | 2 cut(s) | 300, 2195 |
| BfoI | RGCGCY | 1 cut(s) | 1373 |
| BfrI | CTTAAG | 1 cut(s) | 2537 |
| BfuAI | ACCTGC | 1 cut(s) | 1460 |
| BfuI | GTATCC | 1 cut(s) | 1795 |
| BglII | AGATCT | 2 cut(s) | 1858, 2395 |
| Bme1390I | CCNGG | 6 cut(s) | 6, 325, 595, 1031, 1244, 2185 |
| Bme18I | GGWCC | 3 cut(s) | 994, 1315, 1689 |
| BmgT120I | GGNCC | 4 cut(s) | 994, 1315, 1689, 2213 |
| BmiI | GGNNCC | 5 cut(s) | 692, 1869, 2346, 2436, 2530 |
| BmrFI | CCNGG | 6 cut(s) | 6, 325, 595, 1031, 1244, 2185 |
| BmrI | ACTGGG | 2 cut(s) | 473, 1778 |
| BmsI | GCATC | 6 cut(s) | 103, 376, 483, 607, 2209, 2237 |
| BmuI | ACTGGG | 2 cut(s) | 473, 1778 |
| BpiI | GAAGAC | 3 cut(s) | 324, 582, 2179 |
| Bpu10I | CCTNAGC | 1 cut(s) | 77 |
| Bpu14I | TTCGAA | 1 cut(s) | 2522 |
| BpuEI | CTTGAG | 6 cut(s) | 353, 1008, 1169, 1611, 1847, 2645 |
| BpuMI | CCSGG | 1 cut(s) | 595 |
| Bsa29I | ATCGAT | 1 cut(s) | 1756 |
| BsaJI | CCNNGG | 5 cut(s) | 1486, 1514, 1807, 2184, 2245 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 339, 369, 669, 699, 1804, 1834, 2307, 2337 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1443, 1721, 2185 |
| Bse1I | ACTGG | 4 cut(s) | 479, 1773, 2438, 2706 |
| Bse3DI | GCAATG | 1 cut(s) | 2814 |
| BseBI | CCWGG | 5 cut(s) | 6, 325, 1031, 1244, 2185 |
| BseCI | ATCGAT | 1 cut(s) | 1756 |
| BseDI | CCNNGG | 5 cut(s) | 1486, 1514, 1807, 2184, 2245 |
| BseGI | GGATG | 6 cut(s) | 236, 474, 679, 1396, 1401, 2025 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1443, 1721, 2185 |
| BseMI | GCAATG | 1 cut(s) | 2814 |
| BseMII | CTCAG | 7 cut(s) | 76, 125, 1212, 2835, 2889, 2913, 2913 |
| BseNI | ACTGG | 4 cut(s) | 479, 1773, 2438, 2706 |
| BseSI | GKGCMC | 2 cut(s) | 364, 1348 |
| BsgI | GTGCAG | 2 cut(s) | 1494, 2313 |
| Bsh1236I | CGCG | 1 cut(s) | 2619 |
| BshFI | GGCC | 4 cut(s) | 544, 2214, 2373, 2605 |
| BshNI | GGYRCC | 3 cut(s) | 690, 2344, 2434 |
| BshVI | ATCGAT | 1 cut(s) | 1756 |
| BsiHKAI | GWGCWC | 4 cut(s) | 364, 1012, 1348, 2921 |
| BsiSI | CCGG | 1 cut(s) | 595 |
| BslFI | GGGAC | 3 cut(s) | 261, 1275, 1468 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1443, 1721, 2185 |
| BsmAI | GTCTC | 3 cut(s) | 301, 2634, 2797 |
| BsmBI | CGTCTC | 1 cut(s) | 2797 |
| BsmFI | GGGAC | 3 cut(s) | 261, 1275, 1468 |
| BsmI | GAATGC | 2 cut(s) | 2230, 2599 |
| BsnI | GGCC | 4 cut(s) | 544, 2214, 2373, 2605 |
| Bsp119I | TTCGAA | 1 cut(s) | 2522 |
| Bsp1286I | GDGCHC | 4 cut(s) | 364, 1012, 1348, 2921 |
| BspACI | CCGC | 2 cut(s) | 580, 2533 |
| BspANI | GGCC | 4 cut(s) | 544, 2214, 2373, 2605 |
| BspCNI | CTCAG | 7 cut(s) | 75, 126, 1213, 2834, 2888, 2912, 2914 |
| BspDI | ATCGAT | 1 cut(s) | 1756 |
| BspFNI | CGCG | 1 cut(s) | 2619 |
| BspHI | TCATGA | 1 cut(s) | 1249 |
| BspLI | GGNNCC | 5 cut(s) | 692, 1869, 2346, 2436, 2530 |
| BspMAI | CTGCAG | 2 cut(s) | 304, 2199 |
| BspMI | ACCTGC | 1 cut(s) | 1460 |
| BspPI | GGATC | 7 cut(s) | 825, 951, 1732, 2196, 2523, 2536, 2697 |
| BspT104I | TTCGAA | 1 cut(s) | 2522 |
| BspT107I | GGYRCC | 3 cut(s) | 690, 2344, 2434 |
| BspTI | CTTAAG | 1 cut(s) | 2537 |
| BsrDI | GCAATG | 1 cut(s) | 2814 |
| BsrI | ACTGG | 4 cut(s) | 479, 1773, 2438, 2706 |
| BssECI | CCNNGG | 5 cut(s) | 1486, 1514, 1807, 2184, 2245 |
| BssSI | CACGAG | 1 cut(s) | 960 |
| BssT1I | CCWWGG | 3 cut(s) | 1486, 1807, 2245 |
| Bst2BI | CACGAG | 1 cut(s) | 960 |
| Bst2UI | CCWGG | 5 cut(s) | 6, 325, 1031, 1244, 2185 |
| Bst4CI | ACNGT | 5 cut(s) | 267, 612, 1482, 2306, 2828 |
| BstAFI | CTTAAG | 1 cut(s) | 2537 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1343, 1352 |
| BstBI | TTCGAA | 1 cut(s) | 2522 |
| BstC8I | GCNNGC | 3 cut(s) | 1066, 1566, 2763 |
| BstDSI | CCRYGG | 1 cut(s) | 1514 |
| BstEII | GGTNACC | 1 cut(s) | 288 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1719 |
| BstF5I | GGATG | 6 cut(s) | 236, 474, 679, 1396, 1401, 2025 |
| BstFNI | CGCG | 1 cut(s) | 2619 |
| BstH2I | RGCGCY | 1 cut(s) | 1373 |
| BstHHI | GCGC | 2 cut(s) | 1372, 2619 |
| BstMAI | GTCTC | 3 cut(s) | 301, 2634, 2797 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 215, 1343, 1352, 1430, 1475 |
| BstNI | CCWGG | 5 cut(s) | 6, 325, 1031, 1244, 2185 |
| BstNSI | RCATGY | 3 cut(s) | 1610, 1969, 2075 |
| BstPI | GGTNACC | 1 cut(s) | 288 |
| BstSCI | CCNGG | 6 cut(s) | 4, 323, 593, 1029, 1242, 2183 |
| BstSFI | CTRYAG | 2 cut(s) | 300, 2195 |
| BstSLI | GKGCMC | 2 cut(s) | 364, 1348 |
| BstUI | CGCG | 1 cut(s) | 2619 |
| BstV2I | GAAGAC | 3 cut(s) | 324, 582, 2179 |
| BstX2I | RGATCY | 5 cut(s) | 830, 1858, 2188, 2395, 2528 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 560 |
| BstYI | RGATCY | 5 cut(s) | 830, 1858, 2188, 2395, 2528 |
| Bsu15I | ATCGAT | 1 cut(s) | 1756 |
| BsuI | GTATCC | 1 cut(s) | 1795 |
| BsuRI | GGCC | 4 cut(s) | 544, 2214, 2373, 2605 |
| BsuTUI | ATCGAT | 1 cut(s) | 1756 |
| BtgI | CCRYGG | 1 cut(s) | 1514 |
| BtsCI | GGATG | 6 cut(s) | 236, 474, 679, 1396, 1401, 2025 |
| BtsI | GCAGTG | 3 cut(s) | 803, 2841, 2861 |
| BtsIMutI | CAGTG | 8 cut(s) | 443, 486, 803, 2445, 2713, 2841, 2861, 2919 |
| BveI | ACCTGC | 1 cut(s) | 1460 |
| Cac8I | GCNNGC | 3 cut(s) | 1066, 1566, 2763 |
| CciI | TCATGA | 1 cut(s) | 1249 |
| CfoI | GCGC | 2 cut(s) | 1372, 2619 |
| Cfr13I | GGNCC | 4 cut(s) | 994, 1315, 1689, 2213 |
| ClaI | ATCGAT | 1 cut(s) | 1756 |
| CpoI | CGGWCCG | 1 cut(s) | 994 |
| CseI | GACGC | 4 cut(s) | 1272, 1574, 1924, 1988 |
| Csp6I | GTAC | 7 cut(s) | 419, 900, 924, 1199, 1225, 2435, 2468 |
| CspI | CGGWCCG | 1 cut(s) | 994 |
| CviQI | GTAC | 7 cut(s) | 419, 900, 924, 1199, 1225, 2435, 2468 |
| DraI | TTTAAA | 2 cut(s) | 2043, 2754 |
| EaeI | YGGCCR | 1 cut(s) | 2371 |
| Ecl136II | GAGCTC | 1 cut(s) | 1010 |
| Eco130I | CCWWGG | 3 cut(s) | 1486, 1807, 2245 |
| Eco24I | GRGCYC | 1 cut(s) | 1012 |
| Eco32I | GATATC | 1 cut(s) | 2717 |
| Eco47I | GGWCC | 3 cut(s) | 994, 1315, 1689 |
| Eco47III | AGCGCT | 1 cut(s) | 1371 |
| Eco53kI | GAGCTC | 1 cut(s) | 1010 |
| Eco57I | CTGAAG | 2 cut(s) | 951, 2787 |
| Eco91I | GGTNACC | 1 cut(s) | 288 |
| EcoICRI | GAGCTC | 1 cut(s) | 1010 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1719 |
| EcoO65I | GGTNACC | 1 cut(s) | 288 |
| EcoRI | GAATTC | 1 cut(s) | 1113 |
| EcoRII | CCWGG | 5 cut(s) | 4, 323, 1029, 1242, 2183 |
| EcoRV | GATATC | 1 cut(s) | 2717 |
| EcoT14I | CCWWGG | 3 cut(s) | 1486, 1807, 2245 |
| EcoT22I | ATGCAT | 4 cut(s) | 622, 1339, 1608, 2230 |
| EcoT38I | GRGCYC | 1 cut(s) | 1012 |
| ErhI | CCWWGG | 3 cut(s) | 1486, 1807, 2245 |
| Esp3I | CGTCTC | 1 cut(s) | 2797 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 567, 599, 1856, 1888, 2060, 2092 |
| FaqI | GGGAC | 3 cut(s) | 261, 1275, 1468 |
| FauI | CCCGC | 1 cut(s) | 2540 |
| FauNDI | CATATG | 1 cut(s) | 868 |
| FokI | GGATG | 6 cut(s) | 243, 461, 686, 1403, 1408, 2032 |
| FriOI | GRGCYC | 1 cut(s) | 1012 |
| FspBI | CTAG | 5 cut(s) | 353, 1013, 1239, 2786, 2932 |
| GlaI | GCGC | 2 cut(s) | 1371, 2618 |
| HaeII | RGCGCY | 1 cut(s) | 1373 |
| HaeIII | GGCC | 4 cut(s) | 544, 2214, 2373, 2605 |
| HapII | CCGG | 1 cut(s) | 595 |
| HgaI | GACGC | 4 cut(s) | 1272, 1574, 1924, 1988 |
| HhaI | GCGC | 2 cut(s) | 1372, 2619 |
| Hin6I | GCGC | 2 cut(s) | 1370, 2617 |
| HinP1I | GCGC | 2 cut(s) | 1370, 2617 |
| HincII | GTYRAC | 3 cut(s) | 2059, 2482, 2559 |
| HindII | GTYRAC | 3 cut(s) | 2059, 2482, 2559 |
| HindIII | AAGCTT | 3 cut(s) | 453, 1431, 1880 |
| HinfI | GANTC | 9 cut(s) | 320, 858, 958, 989, 1399, 1892, 2175, 2846, 2873 |
| HpaII | CCGG | 1 cut(s) | 595 |
| HphI | GGTGA | 7 cut(s) | 191, 326, 1519, 1580, 1967, 2080, 2678 |
| Hpy166II | GTNNAC | 9 cut(s) | 236, 362, 926, 1346, 1510, 1655, 2059, 2482, 2559 |
| Hpy8I | GTNNAC | 9 cut(s) | 236, 362, 926, 1346, 1510, 1655, 2059, 2482, 2559 |
| Hpy99I | CGWCG | 1 cut(s) | 158 |
| HpyCH4III | ACNGT | 5 cut(s) | 267, 612, 1482, 2306, 2828 |
| HpyCH4IV | ACGT | 1 cut(s) | 2548 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 215, 1343, 1352, 1430, 1475 |
| HpySE526I | ACGT | 1 cut(s) | 2548 |
| HspAI | GCGC | 2 cut(s) | 1370, 2617 |
| KpnI | GGTACC | 1 cut(s) | 2438 |
| LweI | GCATC | 6 cut(s) | 103, 376, 483, 607, 2209, 2237 |
| MaeI | CTAG | 5 cut(s) | 353, 1013, 1239, 2786, 2932 |
| MaeII | ACGT | 1 cut(s) | 2548 |
| MaeIII | GTNAC | 9 cut(s) | 288, 1357, 1375, 1586, 1609, 1955, 2281, 2666, 2743 |
| MboII | GAAGA | 9 cut(s) | 122, 197, 329, 506, 587, 707, 2184, 2405, 2637 |
| MfeI | CAATTG | 3 cut(s) | 978, 1905, 2349 |
| MflI | RGATCY | 5 cut(s) | 830, 1858, 2188, 2395, 2528 |
| MhlI | GDGCHC | 4 cut(s) | 364, 1012, 1348, 2921 |
| MlsI | TGGCCA | 1 cut(s) | 2373 |
| MluNI | TGGCCA | 1 cut(s) | 2373 |
| MlyI | GAGTC | 6 cut(s) | 314, 952, 983, 1886, 2169, 2867 |
| MmeI | TCCRAC | 3 cut(s) | 412, 835, 2887 |
| Mox20I | TGGCCA | 1 cut(s) | 2373 |
| Mph1103I | ATGCAT | 4 cut(s) | 622, 1339, 1608, 2230 |
| MroXI | GAANNNNTTC | 4 cut(s) | 57, 144, 501, 2322 |
| MscI | TGGCCA | 1 cut(s) | 2373 |
| MslI | CAYNNNNRTG | 3 cut(s) | 479, 867, 2137 |
| Msp20I | TGGCCA | 1 cut(s) | 2373 |
| MspA1I | CMGCKG | 1 cut(s) | 1568 |
| MspCI | CTTAAG | 1 cut(s) | 2537 |
| MspI | CCGG | 1 cut(s) | 595 |
| MspR9I | CCNGG | 6 cut(s) | 6, 325, 595, 1031, 1244, 2185 |
| MunI | CAATTG | 3 cut(s) | 978, 1905, 2349 |
| Mva1269I | GAATGC | 2 cut(s) | 2230, 2599 |
| MvaI | CCWGG | 5 cut(s) | 6, 325, 1031, 1244, 2185 |
| MvnI | CGCG | 1 cut(s) | 2619 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 215, 1343, 1352, 1430, 1475 |
| NciI | CCSGG | 1 cut(s) | 595 |
| NdeI | CATATG | 1 cut(s) | 868 |
| NlaIV | GGNNCC | 5 cut(s) | 692, 1869, 2346, 2436, 2530 |
| NmuCI | GTSAC | 3 cut(s) | 1586, 1955, 2666 |
| NsiI | ATGCAT | 4 cut(s) | 622, 1339, 1608, 2230 |
| NspI | RCATGY | 3 cut(s) | 1610, 1969, 2075 |
| NspV | TTCGAA | 1 cut(s) | 2522 |
| PagI | TCATGA | 1 cut(s) | 1249 |
| PaqCI | CACCTGC | 1 cut(s) | 1460 |
| PciI | ACATGT | 1 cut(s) | 1965 |
| PctI | GAATGC | 2 cut(s) | 2230, 2599 |
| PdmI | GAANNNNTTC | 4 cut(s) | 57, 144, 501, 2322 |
| PfeI | GAWTC | 3 cut(s) | 858, 1399, 2846 |
| PfoI | TCCNGGA | 1 cut(s) | 1029 |
| PleI | GAGTC | 6 cut(s) | 314, 952, 983, 1886, 2169, 2867 |
| PpsI | GAGTC | 6 cut(s) | 314, 952, 983, 1886, 2169, 2867 |
| PscI | ACATGT | 1 cut(s) | 1965 |
| PshBI | ATTAAT | 2 cut(s) | 1269, 2612 |
| PsiI | TTATAA | 1 cut(s) | 258 |
| Psp124BI | GAGCTC | 1 cut(s) | 1012 |
| Psp1406I | AACGTT | 1 cut(s) | 2548 |
| Psp6I | CCWGG | 5 cut(s) | 4, 323, 1029, 1242, 2183 |
| PspEI | GGTNACC | 1 cut(s) | 288 |
| PspGI | CCWGG | 5 cut(s) | 4, 323, 1029, 1242, 2183 |
| PspN4I | GGNNCC | 5 cut(s) | 692, 1869, 2346, 2436, 2530 |
| PspPI | GGNCC | 4 cut(s) | 994, 1315, 1689, 2213 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2503, 2535 |
| PstI | CTGCAG | 2 cut(s) | 304, 2199 |
| PsuI | RGATCY | 5 cut(s) | 830, 1858, 2188, 2395, 2528 |
| PvuII | CAGCTG | 1 cut(s) | 1568 |
| RsaI | GTAC | 7 cut(s) | 420, 901, 925, 1200, 1226, 2436, 2469 |
| RsaNI | GTAC | 7 cut(s) | 419, 900, 924, 1199, 1225, 2435, 2468 |
| RseI | CAYNNNNRTG | 3 cut(s) | 479, 867, 2137 |
| Rsr2I | CGGWCCG | 1 cut(s) | 994 |
| RsrII | CGGWCCG | 1 cut(s) | 994 |
| SacI | GAGCTC | 1 cut(s) | 1012 |
| Sau96I | GGNCC | 4 cut(s) | 994, 1315, 1689, 2213 |
| SchI | GAGTC | 6 cut(s) | 314, 952, 983, 1886, 2169, 2867 |
| ScrFI | CCNGG | 6 cut(s) | 6, 325, 595, 1031, 1244, 2185 |
| SduI | GDGCHC | 4 cut(s) | 364, 1012, 1348, 2921 |
| SfaNI | GCATC | 6 cut(s) | 103, 376, 483, 607, 2209, 2237 |
| SfcI | CTRYAG | 2 cut(s) | 300, 2195 |
| SfuI | TTCGAA | 1 cut(s) | 2522 |
| SinI | GGWCC | 3 cut(s) | 994, 1315, 1689 |
| SmiI | ATTTAAAT | 1 cut(s) | 2043 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 479, 867, 2137 |
| SmlI | CTYRAG | 7 cut(s) | 332, 1023, 1148, 1626, 1862, 2537, 2660 |
| SmoI | CTYRAG | 7 cut(s) | 332, 1023, 1148, 1626, 1862, 2537, 2660 |
| SsiI | CCGC | 2 cut(s) | 580, 2533 |
| SspI | AATATT | 3 cut(s) | 143, 512, 2581 |
| SspMI | CTAG | 5 cut(s) | 353, 1013, 1239, 2786, 2932 |
| SstI | GAGCTC | 1 cut(s) | 1012 |
| StyD4I | CCNGG | 6 cut(s) | 4, 323, 593, 1029, 1242, 2183 |
| StyI | CCWWGG | 3 cut(s) | 1486, 1807, 2245 |
| SwaI | ATTTAAAT | 1 cut(s) | 2043 |
| TaaI | ACNGT | 5 cut(s) | 267, 612, 1482, 2306, 2828 |
| TaiI | ACGT | 1 cut(s) | 2551 |
| TaqII | GACCGA | 3 cut(s) | 1011, 1332, 2244 |
| TatI | WGTACW | 1 cut(s) | 899 |
| TfiI | GAWTC | 3 cut(s) | 858, 1399, 2846 |
| TscAI | CASTG | 8 cut(s) | 450, 486, 810, 2445, 2713, 2841, 2868, 2926 |
| TseFI | GTSAC | 3 cut(s) | 1586, 1955, 2666 |
| Tsp45I | GTSAC | 3 cut(s) | 1586, 1955, 2666 |
| TspGWI | ACGGA | 1 cut(s) | 823 |
| TspRI | CASTG | 8 cut(s) | 450, 486, 810, 2445, 2713, 2841, 2868, 2926 |
| Vha464I | CTTAAG | 1 cut(s) | 2537 |
| VneI | GTGCAC | 2 cut(s) | 360, 1344 |
| VpaK11BI | GGWCC | 3 cut(s) | 994, 1315, 1689 |
| VspI | ATTAAT | 2 cut(s) | 1269, 2612 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1719 |
| XapI | RAATTY | 4 cut(s) | 163, 1113, 1142, 2038 |
| XbaI | TCTAGA | 1 cut(s) | 1012 |
| XceI | RCATGY | 3 cut(s) | 1610, 1969, 2075 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 46 |
| XmnI | GAANNNNTTC | 4 cut(s) | 57, 144, 501, 2322 |
| XspI | CTAG | 5 cut(s) | 353, 1013, 1239, 2786, 2932 |
| Zsp2I | ATGCAT | 4 cut(s) | 622, 1339, 1608, 2230 |