Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001314

Physical Location & Seq

Genomic Coordinates Forward (+)

159362 .. 160979

Gene Structure 1618 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0002500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGTACGGCAGAGCTGGGCTTGATAGATTTAGGAAAGCTCAGTCCTTGGAACCCTTCTCAGTGAATGCCAATGCGAAATCCTCCACTCCAGCTCAGAAGAGCCCCCCTGCTGTTGCTGTTCAGGAGGCCGGCCCTCAGCATCAGCATCAGCATCTGACTCAGATTGGTGAGGGTCAGTCGAGTTGGCAGCCCCCCGAGTGGGCAATGGATCCCCGCCCTGGTGTTTATTTTCTTCAAGTCTTGAAGGATGGTCAGCTTCTCGACCGCATTCCTCTTGATAGGCGCCGCAACATCTTTGGCCGCCAATCTCATACTTGTGATTTTGTGCTTGATCATCAGTCTGTTTCCCGCCACCATGCTGTTGTTGTTCCTCACAAGAATGGAAGCATATATGTAATTGATTTGGGATCTGCGCACGGTACTTTTGTTGCAAACGAACGCGTGACTAAAGATACCCCTGTTGAGCTTGAAGTTGGGCAGTCTTTGCGGTTTGCTGCATCAACTAGAACTTATGTCTTAACAAAGAACGATGCAGCTCTTTTTCCTCGTCCTCCAATGCCTTCCGAGGTTGACCTGCCACCACCACCTGATCCATCTGATGAAGAAGCTGTCGTCGCTTATAATACGCTTCTAAATCGTTATGGTCTGACCAGGTCTAGCAAACTGCCTAGGCCCAATGAGTCAGCTAACTCCGCAAACAAAAATGGTGACACCCAGCATCCGGAGAGAGCCTCTAAGAGAATTAAGAAGGCAAGAGTATCATTCAGGGATCAAGTTGGAGGAGAGTTGGTTGAAGTTGTTGGTATATCAGATGGTGTGGATGTAGAAACAGAACCTGGTCCGATAGGTGTAAAAGAAGGGCAAAGTCTTGTTGGAAAATATGGATCCCTTGTACAGACTACAGTAATTCCCAAAGGGAAGGAGCAATCATCTGCCAAGGAAGCGAATAATTCCCACAAGGGGATGACTGAAAAATTACAACAAGTCTTAGATAGAGTCAAAACTGCTCCAAAAGGTGGGATATATGATGACCTTTATGGAGAATCTTATTCGGGCAAAGTGGGCACTTCCTGGGCATATCCTTCACTTAGTTCCACTGCCTCTCCAAGTAAAGACTCTGATGAAAAGCCATCGAATGCAAACCATGGAACTAACTCAGGCCAAGTTGATGATGACGAGGATGATTTATTTGGAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003825 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009311 GO:0009312 GO:0009743 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009987 GO:0010033 GO:0010154 GO:0010182 GO:0016051 GO:0016311 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0033554 GO:0034637 GO:0035251 GO:0042221 GO:0042546 GO:0042578 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0046351 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051716 GO:0061458 GO:0065007 GO:0070413 GO:0070887 GO:0071310 GO:0071322 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

399

Amino Acids

43.44

Weight (kDa)

6.2

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	90 - 161	4.1e-06	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	98 - 164	4.8e-19	FHA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78580 AT1G78580 AT1G78580 AT1G78580
fragaria_vesca	FvH4_3g06590 FvH4_3g06590 FvH4_3g17650 FvH4_3g17650
malus_domestica	MD03G1250300.v1.1 MD10G1270400.v1.1 MD11G1270400.v1.1
prunus_persica	Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1
pyrus_communis	pycom03g19800 pycom10g22630 pycom11g23920
rosa_chinensis	RchiOBHm_Chr5g0012561 RchiOBHm_Chr5g0029381
rosa_laevigata	RLG00000031925 RLG00000033160
rosa_multiflora	Rmu_sc0003577.1_g000012 Rmu_sc0004373.1_g000021
rosa_roxburghii	Rroxscaffold_1G00050580 Rroxscaffold_1G00064100
rosa_rugosa	Rorug05G0002400 Rorug05G0002400 Rorug05G0002500 Rorug05G0002600 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000
rosa_samantha	Rh5AG096400 Rh5AG205600 Rh5BG092600 Rh5BG204200 Rh5CG105500 Rh5DG092100 Rh5DG207800
rosa_wichuraiana	Rw5G008440 Rw5G018730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	621
Acc16I	TGCGCA	1 cut(s)	414
Acc36I	ACCTGC	1 cut(s)	582
AccB1I	GGYRCC	1 cut(s)	282
AccB7I	CCANNNNNTGG	1 cut(s)	1016
AccII	CGCG	1 cut(s)	441
AccIII	TCCGGA	1 cut(s)	721
AciI	CCGC	7 cut(s)	214, 265, 286, 301, 349, 487, 693
AclWI	GGATC	7 cut(s)	203, 216, 415, 584, 777, 879, 892
AcoI	YGGCCR	1 cut(s)	298
AcyI	GRCGYC	1 cut(s)	283
AfaI	GTAC	3 cut(s)	5, 421, 894
AfiI	CCNNNNNNNGG	6 cut(s)	198, 199, 218, 721, 960, 1016
AflIII	ACRYGT	1 cut(s)	439
AgsI	TTSAA	4 cut(s)	236, 244, 470, 794
AjnI	CCWGG	4 cut(s)	217, 650, 835, 1070
AluBI	AGCT	8 cut(s)	14, 38, 92, 256, 466, 536, 608, 686
AluI	AGCT	8 cut(s)	14, 38, 92, 256, 466, 536, 608, 686
Alw26I	GTCTC	1 cut(s)	1188
AlwI	GGATC	7 cut(s)	203, 216, 415, 584, 777, 879, 892
AlwNI	CAGNNNCTG	2 cut(s)	154, 836
Ama87I	CYCGRG	1 cut(s)	194
Aor13HI	TCCGGA	1 cut(s)	721
AoxI	GGCC	5 cut(s)	126, 130, 298, 671, 1159
ApeKI	GCWGC	3 cut(s)	187, 494, 533
AspA2I	CCTAGG	1 cut(s)	668
AspLEI	GCGC	2 cut(s)	285, 415
AspS9I	GGNCC	3 cut(s)	131, 672, 839
AsuHPI	GGTGA	2 cut(s)	179, 719
AvaI	CYCGRG	1 cut(s)	194
AvaII	GGWCC	1 cut(s)	839
AvrII	CCTAGG	1 cut(s)	668
BaeGI	GKGCMC	1 cut(s)	1067
BaeI	ACNNNNGTAYC	4 cut(s)	411, 444, 444, 477
BamHI	GGATCC	2 cut(s)	208, 884
BanI	GGYRCC	1 cut(s)	282
BanII	GRGCYC	1 cut(s)	104
BbvCI	CCTCAGC	1 cut(s)	135
BbvI	GCAGC	3 cut(s)	199, 481, 545
BccI	CCATC	4 cut(s)	242, 601, 806, 1138
BceAI	ACGGC	1 cut(s)	22
BciT130I	CCWGG	4 cut(s)	219, 652, 837, 1072
BclI	TGATCA	1 cut(s)	331
BcoDI	GTCTC	1 cut(s)	1188
BfaI	CTAG	3 cut(s)	504, 657, 669
BfmI	CTRYAG	1 cut(s)	900
BfoI	RGCGCY	1 cut(s)	286
BfuAI	ACCTGC	1 cut(s)	582
BisI	GCNGC	5 cut(s)	188, 286, 301, 495, 534
BlnI	CCTAGG	1 cut(s)	668
BlsI	GCNGC	5 cut(s)	189, 287, 302, 496, 535
Bme1390I	CCNGG	4 cut(s)	219, 652, 837, 1072
Bme18I	GGWCC	1 cut(s)	839
BmeT110I	CYCGRG	1 cut(s)	194
BmgT120I	GGNCC	3 cut(s)	131, 672, 839
BmiI	GGNNCC	4 cut(s)	51, 210, 284, 886
BmrFI	CCNGG	4 cut(s)	219, 652, 837, 1072
BmsI	GCATC	6 cut(s)	148, 154, 160, 506, 520, 727
BplI	GAGNNNNNCTC	2 cut(s)	716, 748
BpmI	CTGGAG	1 cut(s)	72
Bpu10I	CCTNAGC	1 cut(s)	135
BsaHI	GRCGYC	1 cut(s)	283
BsaJI	CCNNGG	7 cut(s)	45, 217, 564, 668, 936, 1071, 1144
BsaWI	WCCGGW	1 cut(s)	721
BsaXI	ACNNNNNCTCC	4 cut(s)	774, 804, 1087, 1117
Bsc4I	CCNNNNNNNGG	6 cut(s)	198, 199, 218, 721, 960, 1016
Bse118I	RCCGGY	1 cut(s)	128
Bse3DI	GCAATG	1 cut(s)	210
BseAI	TCCGGA	1 cut(s)	721
BseBI	CCWGG	4 cut(s)	219, 652, 837, 1072
BseDI	CCNNGG	7 cut(s)	45, 217, 564, 668, 936, 1071, 1144
BseGI	GGATG	5 cut(s)	253, 718, 826, 969, 1186
BseLI	CCNNNNNNNGG	6 cut(s)	198, 199, 218, 721, 960, 1016
BseMI	GCAATG	1 cut(s)	210
BseMII	CTCAG	6 cut(s)	53, 72, 107, 149, 173, 1170
BseRI	GAGGAG	1 cut(s)	795
BseSI	GKGCMC	1 cut(s)	1067
BseXI	GCAGC	3 cut(s)	199, 481, 545
BseYI	CCCAGC	2 cut(s)	14, 714
Bsh1236I	CGCG	1 cut(s)	441
Bsh1285I	CGRYCG	1 cut(s)	265
BshFI	GGCC	5 cut(s)	128, 132, 300, 673, 1161
BshNI	GGYRCC	1 cut(s)	282
BsiEI	CGRYCG	1 cut(s)	265
BsiHKCI	CYCGRG	1 cut(s)	194
BsiSI	CCGG	2 cut(s)	129, 722
BslI	CCNNNNNNNGG	6 cut(s)	198, 199, 218, 721, 960, 1016
BsmAI	GTCTC	1 cut(s)	1188
BsmI	GAATGC	3 cut(s)	70, 267, 1141
BsnI	GGCC	5 cut(s)	128, 132, 300, 673, 1161
BsoBI	CYCGRG	1 cut(s)	194
Bsp1286I	GDGCHC	2 cut(s)	104, 1067
Bsp13I	TCCGGA	1 cut(s)	721
Bsp1407I	TGTACA	1 cut(s)	892
Bsp143I	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
Bsp19I	CCATGG	1 cut(s)	1144
BspACI	CCGC	7 cut(s)	214, 265, 286, 301, 349, 487, 693
BspANI	GGCC	5 cut(s)	128, 132, 300, 673, 1161
BspCNI	CTCAG	6 cut(s)	52, 71, 106, 148, 172, 1169
BspEI	TCCGGA	1 cut(s)	721
BspFNI	CGCG	1 cut(s)	441
BspLI	GGNNCC	4 cut(s)	51, 210, 284, 886
BspMI	ACCTGC	1 cut(s)	582
BspPI	GGATC	7 cut(s)	203, 216, 415, 584, 777, 879, 892
BspQI	GCTCTTC	1 cut(s)	92
BspT107I	GGYRCC	1 cut(s)	282
BsrDI	GCAATG	1 cut(s)	210
BsrFI	RCCGGY	1 cut(s)	128
BsrGI	TGTACA	1 cut(s)	892
BssAI	RCCGGY	1 cut(s)	128
BssECI	CCNNGG	7 cut(s)	45, 217, 564, 668, 936, 1071, 1144
BssMI	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
BssNI	GRCGYC	1 cut(s)	283
BssT1I	CCWWGG	4 cut(s)	45, 668, 936, 1144
Bst2UI	CCWGG	4 cut(s)	219, 652, 837, 1072
Bst4CI	ACNGT	2 cut(s)	419, 904
Bst6I	CTCTTC	1 cut(s)	92
BstACI	GRCGYC	1 cut(s)	283
BstAPI	GCANNNNNTGC	1 cut(s)	484
BstAUI	TGTACA	1 cut(s)	892
BstC8I	GCNNGC	1 cut(s)	130
BstDEI	CTNAG	9 cut(s)	39, 58, 93, 135, 159, 735, 988, 1088, 1156
BstDSI	CCRYGG	1 cut(s)	1144
BstF5I	GGATG	5 cut(s)	253, 718, 826, 969, 1186
BstFNI	CGCG	1 cut(s)	441
BstH2I	RGCGCY	1 cut(s)	286
BstHHI	GCGC	2 cut(s)	285, 415
BstKTI	GATC	6 cut(s)	211, 334, 410, 592, 772, 887
BstMAI	GTCTC	1 cut(s)	1188
BstMBI	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
BstMCI	CGRYCG	1 cut(s)	265
BstMWI	GCNNNNNNNGC	5 cut(s)	484, 614, 692, 941, 1062
BstNI	CCWGG	4 cut(s)	219, 652, 837, 1072
BstSCI	CCNGG	4 cut(s)	217, 650, 835, 1070
BstSFI	CTRYAG	1 cut(s)	900
BstSLI	GKGCMC	1 cut(s)	1067
BstUI	CGCG	1 cut(s)	441
BstV1I	GCAGC	3 cut(s)	199, 481, 545
BstX2I	RGATCY	3 cut(s)	208, 407, 884
BstYI	RGATCY	3 cut(s)	208, 407, 884
BsuRI	GGCC	5 cut(s)	128, 132, 300, 673, 1161
BtgI	CCRYGG	1 cut(s)	1144
BtsCI	GGATG	5 cut(s)	253, 718, 826, 969, 1186
BtsI	GCAGTG	1 cut(s)	1095
BtsIMutI	CAGTG	2 cut(s)	66, 1095
BveI	ACCTGC	1 cut(s)	582
Cac8I	GCNNGC	1 cut(s)	130
CaiI	CAGNNNCTG	2 cut(s)	154, 836
CfoI	GCGC	2 cut(s)	285, 415
Cfr10I	RCCGGY	1 cut(s)	128
Cfr13I	GGNCC	3 cut(s)	131, 672, 839
CsiI	ACCWGGT	2 cut(s)	650, 835
Csp6I	GTAC	3 cut(s)	4, 420, 893
CviAII	CATG	2 cut(s)	356, 1145
CviQI	GTAC	3 cut(s)	4, 420, 893
DdeI	CTNAG	9 cut(s)	39, 58, 93, 135, 159, 735, 988, 1088, 1156
DinI	GGCGCC	1 cut(s)	284
DpnI	GATC	6 cut(s)	210, 333, 409, 591, 771, 886
DpnII	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
EaeI	YGGCCR	1 cut(s)	298
Eam1104I	CTCTTC	1 cut(s)	92
EarI	CTCTTC	1 cut(s)	92
Eco130I	CCWWGG	4 cut(s)	45, 668, 936, 1144
Eco24I	GRGCYC	1 cut(s)	104
Eco47I	GGWCC	1 cut(s)	839
Eco88I	CYCGRG	1 cut(s)	194
EcoRII	CCWGG	4 cut(s)	217, 650, 835, 1070
EcoT14I	CCWWGG	4 cut(s)	45, 668, 936, 1144
EcoT38I	GRGCYC	1 cut(s)	104
EgeI	GGCGCC	1 cut(s)	284
EheI	GGCGCC	1 cut(s)	284
ErhI	CCWWGG	4 cut(s)	45, 668, 936, 1144
FaeI	CATG	2 cut(s)	359, 1148
FatI	CATG	2 cut(s)	355, 1144
FauI	CCCGC	2 cut(s)	221, 356
FbaI	TGATCA	1 cut(s)	331
Fnu4HI	GCNGC	5 cut(s)	188, 286, 301, 495, 534
FokI	GGATG	5 cut(s)	260, 705, 833, 976, 1193
FriOI	GRGCYC	1 cut(s)	104
FseI	GGCCGGCC	1 cut(s)	132
Fsp4HI	GCNGC	5 cut(s)	188, 286, 301, 495, 534
FspBI	CTAG	3 cut(s)	504, 657, 669
FspI	TGCGCA	1 cut(s)	414
GlaI	GCGC	2 cut(s)	284, 414
GluI	GCNGC	5 cut(s)	188, 286, 301, 495, 534
GsaI	CCCAGC	2 cut(s)	18, 718
GsuI	CTGGAG	1 cut(s)	72
HaeII	RGCGCY	1 cut(s)	286
HaeIII	GGCC	5 cut(s)	128, 132, 300, 673, 1161
HapII	CCGG	2 cut(s)	129, 722
HhaI	GCGC	2 cut(s)	285, 415
Hin1I	GRCGYC	1 cut(s)	283
Hin1II	CATG	2 cut(s)	359, 1148
Hin6I	GCGC	2 cut(s)	283, 413
HinP1I	GCGC	2 cut(s)	283, 413
HincII	GTYRAC	1 cut(s)	571
HindII	GTYRAC	1 cut(s)	571
HinfI	GANTC	5 cut(s)	157, 680, 996, 1043, 1115
HpaII	CCGG	2 cut(s)	129, 722
HphI	GGTGA	2 cut(s)	179, 719
Hpy166II	GTNNAC	1 cut(s)	571
Hpy188I	TCNGA	9 cut(s)	96, 156, 162, 565, 598, 648, 811, 843, 1120
Hpy188III	TCNNGA	5 cut(s)	122, 241, 260, 275, 722
Hpy8I	GTNNAC	1 cut(s)	571
Hpy99I	CGWCG	1 cut(s)	617
HpyAV	CCTTC	7 cut(s)	64, 238, 570, 742, 851, 913, 1092
HpyCH4III	ACNGT	2 cut(s)	419, 904
HpyCH4V	TGCA	4 cut(s)	431, 497, 533, 1139
HpyF10VI	GCNNNNNNNGC	5 cut(s)	484, 614, 692, 941, 1062
HpyF3I	CTNAG	9 cut(s)	39, 58, 93, 135, 159, 735, 988, 1088, 1156
Hsp92I	GRCGYC	1 cut(s)	283
Hsp92II	CATG	2 cut(s)	359, 1148
HspAI	GCGC	2 cut(s)	283, 413
KasI	GGCGCC	1 cut(s)	282
Kpn2I	TCCGGA	1 cut(s)	721
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
Ksp22I	TGATCA	1 cut(s)	331
Kzo9I	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
LguI	GCTCTTC	1 cut(s)	92
LmnI	GCTCC	2 cut(s)	922, 1012
Lsp1109I	GCAGC	3 cut(s)	199, 481, 545
LweI	GCATC	6 cut(s)	148, 154, 160, 506, 520, 727
MabI	ACCWGGT	2 cut(s)	650, 835
MaeI	CTAG	3 cut(s)	504, 657, 669
MaeIII	GTNAC	2 cut(s)	442, 707
MalI	GATC	6 cut(s)	210, 333, 409, 591, 771, 886
MboI	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
MboII	GAAGA	3 cut(s)	109, 224, 614
MflI	RGATCY	3 cut(s)	208, 407, 884
MhlI	GDGCHC	2 cut(s)	104, 1067
MluCI	AATT	5 cut(s)	396, 741, 906, 949, 974
MluI	ACGCGT	1 cut(s)	439
Mly113I	GGCGCC	1 cut(s)	283
MlyI	GAGTC	4 cut(s)	151, 689, 1005, 1109
MmeI	TCCRAC	2 cut(s)	757, 853
MroI	TCCGGA	1 cut(s)	721
MroNI	GCCGGC	1 cut(s)	128
MseI	TTAA	2 cut(s)	518, 744
MslI	CAYNNNNRTG	2 cut(s)	315, 378
MspI	CCGG	2 cut(s)	129, 722
MspR9I	CCNGG	4 cut(s)	219, 652, 837, 1072
Mva1269I	GAATGC	3 cut(s)	70, 267, 1141
MvaI	CCWGG	4 cut(s)	219, 652, 837, 1072
MvnI	CGCG	1 cut(s)	441
MwoI	GCNNNNNNNGC	5 cut(s)	484, 614, 692, 941, 1062
NaeI	GCCGGC	1 cut(s)	130
NarI	GGCGCC	1 cut(s)	283
NcoI	CCATGG	1 cut(s)	1144
NdeII	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
NgoMIV	GCCGGC	1 cut(s)	128
NlaIII	CATG	2 cut(s)	359, 1148
NlaIV	GGNNCC	4 cut(s)	51, 210, 284, 886
NmuCI	GTSAC	2 cut(s)	442, 707
NsbI	TGCGCA	1 cut(s)	414
PciSI	GCTCTTC	1 cut(s)	92
PctI	GAATGC	3 cut(s)	70, 267, 1141
PdiI	GCCGGC	1 cut(s)	130
PfeI	GAWTC	1 cut(s)	1043
PflFI	GACNNNGTC	1 cut(s)	652
PflMI	CCANNNNNTGG	1 cut(s)	1016
PkrI	GCNGC	5 cut(s)	189, 287, 302, 496, 535
PleI	GAGTC	4 cut(s)	151, 688, 1004, 1109
PluTI	GGCGCC	1 cut(s)	286
PpsI	GAGTC	4 cut(s)	151, 688, 1004, 1109
PsiI	TTATAA	1 cut(s)	621
Psp6I	CCWGG	4 cut(s)	217, 650, 835, 1070
PspFI	CCCAGC	2 cut(s)	14, 714
PspGI	CCWGG	4 cut(s)	217, 650, 835, 1070
PspN4I	GGNNCC	4 cut(s)	51, 210, 284, 886
PspPI	GGNCC	3 cut(s)	131, 672, 839
PstNI	CAGNNNCTG	2 cut(s)	154, 836
PsuI	RGATCY	3 cut(s)	208, 407, 884
PsyI	GACNNNGTC	1 cut(s)	652
RigI	GGCCGGCC	1 cut(s)	132
RsaI	GTAC	3 cut(s)	5, 421, 894
RsaNI	GTAC	3 cut(s)	4, 420, 893
RseI	CAYNNNNRTG	2 cut(s)	315, 378
SapI	GCTCTTC	1 cut(s)	92
SaqAI	TTAA	2 cut(s)	518, 744
SatI	GCNGC	5 cut(s)	188, 286, 301, 495, 534
Sau3AI	GATC	6 cut(s)	208, 331, 407, 589, 769, 884
Sau96I	GGNCC	3 cut(s)	131, 672, 839
SchI	GAGTC	4 cut(s)	151, 689, 1005, 1109
ScrFI	CCNGG	4 cut(s)	219, 652, 837, 1072
SduI	GDGCHC	2 cut(s)	104, 1067
SexAI	ACCWGGT	2 cut(s)	650, 835
SfaNI	GCATC	6 cut(s)	148, 154, 160, 506, 520, 727
SfcI	CTRYAG	1 cut(s)	900
SfoI	GGCGCC	1 cut(s)	284
SinI	GGWCC	1 cut(s)	839
SmiMI	CAYNNNNRTG	2 cut(s)	315, 378
Sse9I	AATT	5 cut(s)	396, 741, 906, 949, 974
SsiI	CCGC	7 cut(s)	214, 265, 286, 301, 349, 487, 693
SspDI	GGCGCC	1 cut(s)	282
SspMI	CTAG	3 cut(s)	504, 657, 669
StyD4I	CCNGG	4 cut(s)	217, 650, 835, 1070
StyI	CCWWGG	4 cut(s)	45, 668, 936, 1144
TaaI	ACNGT	2 cut(s)	419, 904
TaqI	TCGA	3 cut(s)	179, 261, 1133
TasI	AATT	5 cut(s)	396, 741, 906, 949, 974
TatI	WGTACW	1 cut(s)	892
TauI	GCSGC	2 cut(s)	288, 303
TfiI	GAWTC	1 cut(s)	1043
Tru1I	TTAA	2 cut(s)	518, 744
Tru9I	TTAA	2 cut(s)	518, 744
TscAI	CASTG	2 cut(s)	66, 1102
TseFI	GTSAC	2 cut(s)	442, 707
TseI	GCWGC	3 cut(s)	187, 494, 533
Tsp45I	GTSAC	2 cut(s)	442, 707
TspDTI	ATGAA	2 cut(s)	615, 1137
TspRI	CASTG	2 cut(s)	66, 1102
Tth111I	GACNNNGTC	1 cut(s)	652
Van91I	CCANNNNNTGG	1 cut(s)	1016
VpaK11BI	GGWCC	1 cut(s)	839
XmaJI	CCTAGG	1 cut(s)	668
XspI	CTAG	3 cut(s)	504, 657, 669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.