Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003577.1

Orthogroup ID

OG0001314

Physical Location & Seq

Genomic Coordinates Reverse (-)

61724 .. 67329

Gene Structure 5606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003577.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

atgttccaattcaactgtgtgcaggtaatgttgggtgttgatcgccttgatatgattaagggaattcctcaaaagattttggcatttgaaaaattccttgaggaaaatctgaattggcgtgataaagtagtattgctgcaaattgctgtaccaacaagaactgatgtgcctgagtgtagtccattgtttgatagtcctatttcacttaagatgtactatcagcttccagagtctaatatttttctatacaatgctgtttcactcacagaccagaagctcactagccaggttcatgagattgtgggacgcattaatgggaggtttggaactcttactgctgttccaatacatcatctggaccgatctcttgactttcatgcattatgtgcactatatgctgttactgatgtagcgcttgttacatctttaagggatgggatgaatcttgtgagctatgagtttgttgcttgtcaagcttccaagaaaggggttctcattctaagcgagtttgcaggtgcagcacagtcccttggtgctggtgctatattggtgaacccgtggaatatcacagaagtagctgcttccataggctatgctttgaatatgccagctgatgaaagggaaaagcgtcaccatcataacttcatgcatgtaacaactcacacatctcaagagtgggctgcaacctttgtgagtgaactcaatgatactattgttgaagctcaactaaggaccagacaagttcctcctttacttcctatcaaaggatcagttgatcgctattttcaatcaagcaatcgattacttatactgggatttaatgccactttaactgaaccaaaggatacccttgggagaaggggtggtcaaattagagaaatggaacttaaattgcacccagatctcaaggaacccttgaaaaagctttgtaatgactcaaagacaacaattgttgtccttagtggaagtgatagaagcgtcttggactataactttggtgactacaacatgtggttggcagcagaaaatgggatgttcttgcgtcttacaacgggagaatggatgacaactatgccagaaaatttaaatatggattgggttgacagcgtaaagcatgtctttgagtatttcaccgagagaaccccacgatctcattttgagcttcgtgaaacctcacttgtatggaactacaaatatgcagatattgagtttggaagactccaagccagggatctgctgcagcatctttggacaggcccaatctcgaatgcatctgtcgatgttgtccaaggtggtcggtctgtggaggttcgagcagttggtgttacaaagggtgcagctattgaccgtatattaggagaaattgttcataacaaaggcatgaaggcaccaattgattatgttttatgtattggccactttctaccaaaggacgaagatctctatacattctttgaaccagagcttccttgtgaggtaccagtgcaaactattcctcgacccacatcagtaccaactcctgtcaacccgtctttgcccaagatttcaacgggtaaaagtggttcgaagggatcccgccttaagaagcaacgttcgttgtcaactttagaaaagatagctaatattggaattgtgaatgcttggaggccaacattaatgcgcgatagaatgtctctgcatgaaggttcttctgtgcttgacctcaagggtgacaactacttctcttgtgctgttgggagaaagcgatccagtgcaagatatctacttaaatcgtcagacgatgttgttactcttttaaaagagcttgctgaaggtggagaaccaatgctagtcgtctcggaaagtgaagcaatgcctctcaactcagacggtgtagcagtgcctctcgattcagaaggcgtagcactgcctctcgactcagaaggtgtagtgcctctcgactcagaacgtgtagtgcctctcaactcagaagttggagaacagagcactgagaatatctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003825 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009311 GO:0009312 GO:0009743 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009987 GO:0010033 GO:0010154 GO:0010182 GO:0016051 GO:0016311 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0033554 GO:0034637 GO:0035251 GO:0042221 GO:0042546 GO:0042578 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0046351 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051716 GO:0061458 GO:0065007 GO:0070413 GO:0070887 GO:0071310 GO:0071322 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

666

Amino Acids

74.17

Weight (kDa)

5.68

Isoelectric Point (pI)

43.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78580 AT1G78580 AT1G78580 AT1G78580
fragaria_vesca	FvH4_3g06590 FvH4_3g06590 FvH4_3g17650 FvH4_3g17650
malus_domestica	MD03G1250300.v1.1 MD10G1270400.v1.1 MD11G1270400.v1.1
prunus_persica	Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1
pyrus_communis	pycom03g19800 pycom10g22630 pycom11g23920
rosa_chinensis	RchiOBHm_Chr5g0012561 RchiOBHm_Chr5g0029381
rosa_laevigata	RLG00000031925 RLG00000033160
rosa_multiflora	Rmu_sc0003577.1_g000012 Rmu_sc0004373.1_g000021
rosa_roxburghii	Rroxscaffold_1G00050580 Rroxscaffold_1G00064100
rosa_rugosa	Rorug05G0002400 Rorug05G0002400 Rorug05G0002500 Rorug05G0002600 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000
rosa_samantha	Rh5AG096400 Rh5AG205600 Rh5BG092600 Rh5BG204200 Rh5CG105500 Rh5DG092100 Rh5DG207800
rosa_wichuraiana	Rw5G008440 Rw5G018730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	503
Acc36I	ACCTGC	2 cut(s)	13, 503
Acc65I	GGTACC	1 cut(s)	1477
AccB1I	GGYRCC	2 cut(s)	1387, 1477
AccII	CGCG	1 cut(s)	1662
AciI	CCGC	1 cut(s)	1576
AclI	AACGTT	1 cut(s)	1591
AclWI	GGATC	5 cut(s)	775, 1239, 1566, 1579, 1740
AcoI	YGGCCR	1 cut(s)	1414
AcsI	RAATTY	3 cut(s)	63, 92, 1081
AcuI	CTGAAG	1 cut(s)	1830
AfaI	GTAC	4 cut(s)	150, 215, 1479, 1512
AfeI	AGCGCT	1 cut(s)	414
AfiI	CCNNNNNNNGG	3 cut(s)	486, 764, 1228
AflII	CTTAAG	2 cut(s)	206, 1580
AflIII	ACRYGT	2 cut(s)	1008, 1948
AgsI	TTSAA	8 cut(s)	13, 89, 601, 719, 788, 919, 1457, 1548
AjnI	CCWGG	2 cut(s)	285, 1226
AloI	GAACNNNNNNTCC	2 cut(s)	1350, 1382
Alw21I	GWGCWC	2 cut(s)	391, 1988
Alw26I	GTCTC	2 cut(s)	1677, 1840
Alw44I	GTGCAC	1 cut(s)	387
AlwI	GGATC	5 cut(s)	775, 1239, 1566, 1579, 1740
Aor51HI	AGCGCT	1 cut(s)	414
AoxI	GGCC	3 cut(s)	1255, 1414, 1646
ApaLI	GTGCAC	1 cut(s)	387
ApeKI	GCWGC	8 cut(s)	136, 518, 578, 680, 1019, 1237, 1240, 1337
ApoI	RAATTY	3 cut(s)	63, 92, 1081
ArsI	GACNNNNNNTTYG	2 cut(s)	977, 1009
AseI	ATTAAT	2 cut(s)	312, 1655
Asp700I	GAANNNNTTC	1 cut(s)	1365
Asp718I	GGTACC	1 cut(s)	1477
AspLEI	GCGC	2 cut(s)	415, 1662
AspS9I	GGNCC	3 cut(s)	358, 732, 1256
AsuHPI	GGTGA	5 cut(s)	562, 623, 1010, 1123, 1721
AsuII	TTCGAA	1 cut(s)	1565
AvaII	GGWCC	2 cut(s)	358, 732
BaeGI	GKGCMC	1 cut(s)	391
BaeI	ACNNNNGTAYC	4 cut(s)	699, 732, 1494, 1527
BalI	TGGCCA	1 cut(s)	1416
BamHI	GGATCC	1 cut(s)	1571
BanI	GGYRCC	2 cut(s)	1387, 1477
BbsI	GAAGAC	1 cut(s)	1222
Bbv12I	GWGCWC	2 cut(s)	391, 1988
BbvI	GCAGC	8 cut(s)	123, 530, 565, 667, 1031, 1224, 1252, 1349
BccI	CCATC	2 cut(s)	428, 642
BciT130I	CCWGG	2 cut(s)	287, 1228
BciVI	GTATCC	1 cut(s)	838
BcoDI	GTCTC	2 cut(s)	1677, 1840
BfaI	CTAG	3 cut(s)	282, 1829, 1999
BfmI	CTRYAG	1 cut(s)	1238
BfoI	RGCGCY	1 cut(s)	416
BfrI	CTTAAG	2 cut(s)	206, 1580
BfuAI	ACCTGC	2 cut(s)	13, 503
BfuI	GTATCC	1 cut(s)	838
BglII	AGATCT	2 cut(s)	901, 1438
BisI	GCNGC	8 cut(s)	137, 519, 579, 681, 1020, 1238, 1241, 1338
BlsI	GCNGC	8 cut(s)	138, 520, 580, 682, 1021, 1239, 1242, 1339
Bme1390I	CCNGG	2 cut(s)	287, 1228
Bme18I	GGWCC	2 cut(s)	358, 732
BmgT120I	GGNCC	3 cut(s)	358, 732, 1256
BmiI	GGNNCC	4 cut(s)	912, 1389, 1479, 1573
BmrFI	CCNGG	2 cut(s)	287, 1228
BmrI	ACTGGG	1 cut(s)	821
BmsI	GCATC	2 cut(s)	1252, 1280
BmuI	ACTGGG	1 cut(s)	821
BpiI	GAAGAC	1 cut(s)	1222
Bpu14I	TTCGAA	1 cut(s)	1565
BpuEI	CTTGAG	4 cut(s)	119, 654, 890, 1688
Bsa29I	ATCGAT	1 cut(s)	799
BsaJI	CCNNGG	5 cut(s)	529, 557, 850, 1227, 1288
BsaXI	ACNNNNNCTCC	4 cut(s)	847, 877, 1350, 1380
Bsc4I	CCNNNNNNNGG	3 cut(s)	486, 764, 1228
Bse1I	ACTGG	3 cut(s)	816, 1481, 1749
Bse3DI	GCAATG	1 cut(s)	1857
BseBI	CCWGG	2 cut(s)	287, 1228
BseCI	ATCGAT	1 cut(s)	799
BseDI	CCNNGG	5 cut(s)	529, 557, 850, 1227, 1288
BseGI	GGATG	4 cut(s)	439, 444, 1038, 1068
BseLI	CCNNNNNNNGG	3 cut(s)	486, 764, 1228
BseMI	GCAATG	1 cut(s)	1857
BseMII	CTCAG	6 cut(s)	162, 1878, 1932, 1956, 1980, 1980
BseNI	ACTGG	3 cut(s)	816, 1481, 1749
BseSI	GKGCMC	1 cut(s)	391
BseXI	GCAGC	8 cut(s)	123, 530, 565, 667, 1031, 1224, 1252, 1349
BsgI	GTGCAG	3 cut(s)	41, 537, 1356
Bsh1236I	CGCG	1 cut(s)	1662
BshFI	GGCC	3 cut(s)	1257, 1416, 1648
BshNI	GGYRCC	2 cut(s)	1387, 1477
BshVI	ATCGAT	1 cut(s)	799
BsiHKAI	GWGCWC	2 cut(s)	391, 1988
BslFI	GGGAC	2 cut(s)	318, 511
BslI	CCNNNNNNNGG	3 cut(s)	486, 764, 1228
BsmAI	GTCTC	2 cut(s)	1677, 1840
BsmBI	CGTCTC	1 cut(s)	1840
BsmFI	GGGAC	2 cut(s)	318, 511
BsmI	GAATGC	2 cut(s)	1273, 1642
BsnI	GGCC	3 cut(s)	1257, 1416, 1648
Bsp119I	TTCGAA	1 cut(s)	1565
Bsp1286I	GDGCHC	2 cut(s)	391, 1988
BspACI	CCGC	1 cut(s)	1576
BspANI	GGCC	3 cut(s)	1257, 1416, 1648
BspCNI	CTCAG	6 cut(s)	163, 1877, 1931, 1955, 1979, 1981
BspDI	ATCGAT	1 cut(s)	799
BspFNI	CGCG	1 cut(s)	1662
BspHI	TCATGA	1 cut(s)	292
BspLI	GGNNCC	4 cut(s)	912, 1389, 1479, 1573
BspMAI	CTGCAG	1 cut(s)	1242
BspMI	ACCTGC	2 cut(s)	13, 503
BspPI	GGATC	5 cut(s)	775, 1239, 1566, 1579, 1740
BspT104I	TTCGAA	1 cut(s)	1565
BspT107I	GGYRCC	2 cut(s)	1387, 1477
BspTI	CTTAAG	2 cut(s)	206, 1580
BsrDI	GCAATG	1 cut(s)	1857
BsrI	ACTGG	3 cut(s)	816, 1481, 1749
BssECI	CCNNGG	5 cut(s)	529, 557, 850, 1227, 1288
BssT1I	CCWWGG	3 cut(s)	529, 850, 1288
Bst2UI	CCWGG	2 cut(s)	287, 1228
Bst4CI	ACNGT	4 cut(s)	17, 525, 1349, 1871
BstAFI	CTTAAG	2 cut(s)	206, 1580
BstAPI	GCANNNNNTGC	2 cut(s)	386, 395
BstBI	TTCGAA	1 cut(s)	1565
BstC8I	GCNNGC	2 cut(s)	609, 1806
BstDEI	CTNAG	9 cut(s)	171, 500, 728, 959, 1864, 1918, 1942, 1966, 1989
BstDSI	CCRYGG	1 cut(s)	557
BstENI	CCTNNNNNAGG	1 cut(s)	762
BstF5I	GGATG	4 cut(s)	439, 444, 1038, 1068
BstFNI	CGCG	1 cut(s)	1662
BstH2I	RGCGCY	1 cut(s)	416
BstHHI	GCGC	2 cut(s)	415, 1662
BstMAI	GTCTC	2 cut(s)	1677, 1840
BstMWI	GCNNNNNNNGC	4 cut(s)	386, 395, 473, 518
BstNI	CCWGG	2 cut(s)	287, 1228
BstNSI	RCATGY	3 cut(s)	653, 1012, 1118
BstSCI	CCNGG	2 cut(s)	285, 1226
BstSFI	CTRYAG	1 cut(s)	1238
BstSLI	GKGCMC	1 cut(s)	391
BstUI	CGCG	1 cut(s)	1662
BstV1I	GCAGC	8 cut(s)	123, 530, 565, 667, 1031, 1224, 1252, 1349
BstV2I	GAAGAC	1 cut(s)	1222
BstX2I	RGATCY	4 cut(s)	901, 1231, 1438, 1571
BstYI	RGATCY	4 cut(s)	901, 1231, 1438, 1571
Bsu15I	ATCGAT	1 cut(s)	799
BsuI	GTATCC	1 cut(s)	838
BsuRI	GGCC	3 cut(s)	1257, 1416, 1648
BsuTUI	ATCGAT	1 cut(s)	799
BtgI	CCRYGG	1 cut(s)	557
BtsCI	GGATG	4 cut(s)	439, 444, 1038, 1068
BtsI	GCAGTG	2 cut(s)	1884, 1904
BtsIMutI	CAGTG	5 cut(s)	1488, 1756, 1884, 1904, 1986
BveI	ACCTGC	2 cut(s)	13, 503
Cac8I	GCNNGC	2 cut(s)	609, 1806
CciI	TCATGA	1 cut(s)	292
CfoI	GCGC	2 cut(s)	415, 1662
Cfr13I	GGNCC	3 cut(s)	358, 732, 1256
ClaI	ATCGAT	1 cut(s)	799
CseI	GACGC	4 cut(s)	315, 617, 967, 1031
Csp6I	GTAC	4 cut(s)	149, 214, 1478, 1511
CviAII	CATG	8 cut(s)	293, 377, 646, 650, 1009, 1115, 1381, 1679
CviQI	GTAC	4 cut(s)	149, 214, 1478, 1511
DdeI	CTNAG	9 cut(s)	171, 500, 728, 959, 1864, 1918, 1942, 1966, 1989
DraI	TTTAAA	2 cut(s)	1086, 1797
EaeI	YGGCCR	1 cut(s)	1414
Eco130I	CCWWGG	3 cut(s)	529, 850, 1288
Eco32I	GATATC	1 cut(s)	1760
Eco47I	GGWCC	2 cut(s)	358, 732
Eco47III	AGCGCT	1 cut(s)	414
Eco57I	CTGAAG	1 cut(s)	1830
EcoNI	CCTNNNNNAGG	1 cut(s)	762
EcoRI	GAATTC	1 cut(s)	63
EcoRII	CCWGG	2 cut(s)	285, 1226
EcoRV	GATATC	1 cut(s)	1760
EcoT14I	CCWWGG	3 cut(s)	529, 850, 1288
EcoT22I	ATGCAT	3 cut(s)	382, 651, 1273
ErhI	CCWWGG	3 cut(s)	529, 850, 1288
Esp3I	CGTCTC	1 cut(s)	1840
FaeI	CATG	8 cut(s)	296, 380, 649, 653, 1012, 1118, 1384, 1682
FalI	AAGNNNNNCTT	4 cut(s)	899, 931, 1103, 1135
FaqI	GGGAC	2 cut(s)	318, 511
FatI	CATG	8 cut(s)	292, 376, 645, 649, 1008, 1114, 1380, 1678
FauI	CCCGC	1 cut(s)	1583
Fnu4HI	GCNGC	8 cut(s)	137, 519, 579, 681, 1020, 1238, 1241, 1338
FokI	GGATG	4 cut(s)	446, 451, 1045, 1075
Fsp4HI	GCNGC	8 cut(s)	137, 519, 579, 681, 1020, 1238, 1241, 1338
FspBI	CTAG	3 cut(s)	282, 1829, 1999
GlaI	GCGC	2 cut(s)	414, 1661
GluI	GCNGC	8 cut(s)	137, 519, 579, 681, 1020, 1238, 1241, 1338
HaeII	RGCGCY	1 cut(s)	416
HaeIII	GGCC	3 cut(s)	1257, 1416, 1648
HgaI	GACGC	4 cut(s)	315, 617, 967, 1031
HhaI	GCGC	2 cut(s)	415, 1662
Hin1II	CATG	8 cut(s)	296, 380, 649, 653, 1012, 1118, 1384, 1682
Hin6I	GCGC	2 cut(s)	413, 1660
HinP1I	GCGC	2 cut(s)	413, 1660
HincII	GTYRAC	3 cut(s)	1102, 1525, 1602
HindII	GTYRAC	3 cut(s)	1102, 1525, 1602
HindIII	AAGCTT	2 cut(s)	474, 923
HinfI	GANTC	7 cut(s)	230, 442, 935, 1218, 1889, 1916, 1940
HphI	GGTGA	5 cut(s)	562, 623, 1010, 1123, 1721
Hpy166II	GTNNAC	6 cut(s)	389, 553, 698, 1102, 1525, 1602
Hpy188I	TCNGA	8 cut(s)	111, 1777, 1840, 1867, 1894, 1921, 1945, 1969
Hpy8I	GTNNAC	6 cut(s)	389, 553, 698, 1102, 1525, 1602
HpyAV	CCTTC	7 cut(s)	852, 1378, 1561, 1676, 1805, 1889, 1916
HpyCH4III	ACNGT	4 cut(s)	17, 525, 1349, 1871
HpyCH4IV	ACGT	2 cut(s)	1591, 1948
HpyF10VI	GCNNNNNNNGC	4 cut(s)	386, 395, 473, 518
HpyF3I	CTNAG	9 cut(s)	171, 500, 728, 959, 1864, 1918, 1942, 1966, 1989
HpySE526I	ACGT	2 cut(s)	1591, 1948
Hsp92II	CATG	8 cut(s)	296, 380, 649, 653, 1012, 1118, 1384, 1682
HspAI	GCGC	2 cut(s)	413, 1660
KpnI	GGTACC	1 cut(s)	1481
Lsp1109I	GCAGC	8 cut(s)	123, 530, 565, 667, 1031, 1224, 1252, 1349
LweI	GCATC	2 cut(s)	1252, 1280
MaeI	CTAG	3 cut(s)	282, 1829, 1999
MaeII	ACGT	2 cut(s)	1591, 1948
MaeIII	GTNAC	8 cut(s)	400, 418, 629, 652, 998, 1324, 1709, 1786
MboII	GAAGA	3 cut(s)	1227, 1448, 1680
MfeI	CAATTG	2 cut(s)	948, 1392
MflI	RGATCY	4 cut(s)	901, 1231, 1438, 1571
MhlI	GDGCHC	2 cut(s)	391, 1988
MlsI	TGGCCA	1 cut(s)	1416
MluNI	TGGCCA	1 cut(s)	1416
MlyI	GAGTC	5 cut(s)	239, 929, 1212, 1910, 1934
MmeI	TCCRAC	1 cut(s)	1954
Mox20I	TGGCCA	1 cut(s)	1416
Mph1103I	ATGCAT	3 cut(s)	382, 651, 1273
MroXI	GAANNNNTTC	1 cut(s)	1365
MscI	TGGCCA	1 cut(s)	1416
MslI	CAYNNNNRTG	1 cut(s)	1180
Msp20I	TGGCCA	1 cut(s)	1416
MspA1I	CMGCKG	1 cut(s)	611
MspCI	CTTAAG	2 cut(s)	206, 1580
MspR9I	CCNGG	2 cut(s)	287, 1228
MunI	CAATTG	2 cut(s)	948, 1392
Mva1269I	GAATGC	2 cut(s)	1273, 1642
MvaI	CCWGG	2 cut(s)	287, 1228
MvnI	CGCG	1 cut(s)	1662
MwoI	GCNNNNNNNGC	4 cut(s)	386, 395, 473, 518
NlaIII	CATG	8 cut(s)	296, 380, 649, 653, 1012, 1118, 1384, 1682
NlaIV	GGNNCC	4 cut(s)	912, 1389, 1479, 1573
NmuCI	GTSAC	3 cut(s)	629, 998, 1709
NsiI	ATGCAT	3 cut(s)	382, 651, 1273
NspI	RCATGY	3 cut(s)	653, 1012, 1118
NspV	TTCGAA	1 cut(s)	1565
PagI	TCATGA	1 cut(s)	292
PaqCI	CACCTGC	1 cut(s)	503
PciI	ACATGT	1 cut(s)	1008
PctI	GAATGC	2 cut(s)	1273, 1642
PdmI	GAANNNNTTC	1 cut(s)	1365
PfeI	GAWTC	2 cut(s)	442, 1889
PkrI	GCNGC	8 cut(s)	138, 520, 580, 682, 1021, 1239, 1242, 1339
PleI	GAGTC	5 cut(s)	238, 929, 1212, 1910, 1934
PpsI	GAGTC	5 cut(s)	238, 929, 1212, 1910, 1934
PscI	ACATGT	1 cut(s)	1008
PshBI	ATTAAT	2 cut(s)	312, 1655
Psp1406I	AACGTT	1 cut(s)	1591
Psp6I	CCWGG	2 cut(s)	285, 1226
PspGI	CCWGG	2 cut(s)	285, 1226
PspN4I	GGNNCC	4 cut(s)	912, 1389, 1479, 1573
PspPI	GGNCC	3 cut(s)	358, 732, 1256
PsrI	GAACNNNNNNTAC	2 cut(s)	1546, 1578
PstI	CTGCAG	1 cut(s)	1242
PsuI	RGATCY	4 cut(s)	901, 1231, 1438, 1571
PvuII	CAGCTG	1 cut(s)	611
RsaI	GTAC	4 cut(s)	150, 215, 1479, 1512
RsaNI	GTAC	4 cut(s)	149, 214, 1478, 1511
RseI	CAYNNNNRTG	1 cut(s)	1180
SatI	GCNGC	8 cut(s)	137, 519, 579, 681, 1020, 1238, 1241, 1338
Sau96I	GGNCC	3 cut(s)	358, 732, 1256
SchI	GAGTC	5 cut(s)	239, 929, 1212, 1910, 1934
ScrFI	CCNGG	2 cut(s)	287, 1228
SduI	GDGCHC	2 cut(s)	391, 1988
SfaNI	GCATC	2 cut(s)	1252, 1280
SfcI	CTRYAG	1 cut(s)	1238
SfuI	TTCGAA	1 cut(s)	1565
SinI	GGWCC	2 cut(s)	358, 732
SmiI	ATTTAAAT	1 cut(s)	1086
SmiMI	CAYNNNNRTG	1 cut(s)	1180
SmlI	CTYRAG	6 cut(s)	98, 206, 669, 905, 1580, 1703
SmoI	CTYRAG	6 cut(s)	98, 206, 669, 905, 1580, 1703
SsiI	CCGC	1 cut(s)	1576
SspI	AATATT	2 cut(s)	238, 1624
SspMI	CTAG	3 cut(s)	282, 1829, 1999
StyD4I	CCNGG	2 cut(s)	285, 1226
StyI	CCWWGG	3 cut(s)	529, 850, 1288
SwaI	ATTTAAAT	1 cut(s)	1086
TaaI	ACNGT	4 cut(s)	17, 525, 1349, 1871
TaiI	ACGT	2 cut(s)	1594, 1951
TaqI	TCGA	9 cut(s)	799, 1265, 1278, 1312, 1498, 1565, 1887, 1914, 1938
TaqII	GACCGA	2 cut(s)	375, 1287
TatI	WGTACW	1 cut(s)	213
TfiI	GAWTC	2 cut(s)	442, 1889
TscAI	CASTG	5 cut(s)	1488, 1756, 1884, 1911, 1993
TseFI	GTSAC	3 cut(s)	629, 998, 1709
TseI	GCWGC	8 cut(s)	136, 518, 578, 680, 1019, 1237, 1240, 1337
Tsp45I	GTSAC	3 cut(s)	629, 998, 1709
TspDTI	ATGAA	8 cut(s)	281, 365, 455, 630, 634, 1358, 1397, 1695
TspRI	CASTG	5 cut(s)	1488, 1756, 1884, 1911, 1993
Vha464I	CTTAAG	2 cut(s)	206, 1580
VneI	GTGCAC	1 cut(s)	387
VpaK11BI	GGWCC	2 cut(s)	358, 732
VspI	ATTAAT	2 cut(s)	312, 1655
XagI	CCTNNNNNAGG	1 cut(s)	762
XapI	RAATTY	3 cut(s)	63, 92, 1081
XceI	RCATGY	3 cut(s)	653, 1012, 1118
XmnI	GAANNNNTTC	1 cut(s)	1365
XspI	CTAG	3 cut(s)	282, 1829, 1999
Zsp2I	ATGCAT	3 cut(s)	382, 651, 1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.