Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001314

Physical Location & Seq

Genomic Coordinates Reverse (-)

24156097 .. 24167316

Gene Structure 11220 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G018730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2793 bp

ATGCCTGGGAACAAGTACAACAGTAATTCAGCCCACGTTCCAAATCGAACTGAACGGCTCTTGAGAGTAAGGGAGATTAGGAAGAATATTAGGGCATCATCACAGTTGAATGAAGCAAATGATAATAATAGGGTAAATCTACCATCCGAGCATGAAAGAGAAGAGGAAAACTCAAGAAATTTGTTTATCGAAGAATACTTGGAAGGGGCTGCAGCTGCAAGGGCCCTTAATGAGGGGCATGAAAAGCAAGAAGCAAGGCCTCTCAGACAGCGGCTGTTGGTTGTGGCTAACAGGTTACCCGTCTCTGCTATTAGGAGAGGTGAAGATTCATGGTCTTTGGAGATAAGTGCTGGGGGTCTGGTCACTGCCCTTTTGGGTGTAAAGGAGTTTGAGGCAAGGTGGATTGGATGGGCAGGGGTAAATGTGCCAGATGATATTGGACAGAGGGCACTTACTAAAGCTCTGGCTGAAAAGAAGTGTATCCCCGTCTTCCTTGATGAGGAAATTGTTCATCAATATTACAATGGCTATTGCAACAATATTTTGTGGCCCCTTTTCCATTACCTTGGGCTTCCACAAGAAGATCGACTTGCTACCACTCGGAGTTTCCAGTCGCAGTTTTCTGCATATAAGAAGGCAAATCAAATGTTTGCAGATGTAGTTAATGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCAAAATGCTTGAAGGAATATAACAGCAAAATGAAAGTCGGCTGGTTTCTTCACACTCCCTTTCCTTCCTCTGAAATTCATAGGACACTGCCATCACGATCAGAGCTCCTGCGCTCAGTTCTTGCAGCTGATTTAGTTGGTTTTCACACTTATGACTATGCACGACACTTTGTTAGTGCTTGCACTCGCATTCTTGGGCTTGAGGGTACGCCTGAAGGAGTTGAGGATCAAGGGAGGCTTACTCGAGTGGCTGCGTTTCCTATTGGAATAGATTCAGATCGCTTCATTCGAGCACTTGAGGTTCCTCAAGTCCAAGAACACATTAGGGAACTGAAAGACAGATTTGCAGGGCGAAAGGTAATGTTGGGTGTTGATCGGCTTGATATGATTAAAGGAATCCCTCAAAAGATATTGGCGTTTGAAAAGTTTCTTGAGGAAAACCCAATTTGGCGTGACAAAGTGGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGATGTTCCTGAGTATCAGAAACTTACAAGTCAGGTTCATGAAATTGTTGGACGAATTAATGGCAGATTTGGAAGTTTGACTACTGTCCCTATACATCACCTGGATCGTTCTCTCGAATTTCAAGCATTATGTGCACTGTATGCTGTTACTGACGTAGCACTTGTCACATCCCTCAGGGATGGAATGAATCTTGTTAGTTATGAATATGTGGCATGCCAAGATGCAAAGAAAGGGGTCCTTATCCTTAGTGAGTTTGCTGGTGCCGCACAGTCTCTAGGTGCCGGAGCAATTCTAGTGAACCCATGGAACATCACAGAAGTTGCCAATTCAATTGCCCAAGCATTGAATATGTCCTCTGAAGAGAGAGAGAAGCGACATAGGCATAACTTTGCACATGTGACAACCCACACTGCCCAGGAATGGGCTGAAACTTTTGTAAGTGAGCTGAATGATACTGTTGTAGAGGCGCAAATACGGACGAGACAGGTACCACCACCACTTCCAAACAGGGAGACAATTCAACGTTACTTGCGAGCAAACAATCGATTGCTCATACTGGGATTCAATGCGACTTTAACTGAACCAGTGGACACACCTGAGAGACGAGGCGATCAAATAAAAGAAATGGAACTAAAACTGCATCCAGATTTGATAGAACCCTTGACAGCACTCTGCAATGATCCAAACACAACTATTGTTGTCCTCAGTGGAAGTGACAGGGCTACCTTAGACGAAAACTTTTTACCATACTTTGGGGAGCTTGGCATGTGGTTGGCAGCTGAAAATGGAATGTTTTTACGTCTTACAAAGGGAGGATGGATGACAACAATGCCTGAACTTTCAAATATGGAATGGGTCGAAAGTGTGCAGCATGTCTTTGAGTATTTTACAGAGAGAACACCCCGGTCACACTTCGAAAGTCGTGAAACTTCCCTCGTGTGGAATTACAAATATGCAGATGTTGATTTTGGAAGACTTCAAGCGAGAGATATGTTACAGCATCTCTGGACTGGTCCAATTTCTAATGCATCTGTTGATGTTGTTCAAGGTAGCCGGTCTGTGGAGGTGCGAGCAGTTGGTGTCACAAAGGGTGCAGCAATTGACCGTATATTGGGAGAAATAGTTCACAGTAAATCCATGACATCCCCCATTGATTATGTACTGTGCATTGGGCATTTTCTTGGGAAGGATGAAGATGTGTACTCGTTTTTCGAGCCAGATCCCCCGACTGACAATATTGGTCTTCCAAGAAGCAAGATAACTGACGGACTAAAGTCACCTGGTGAGAGAAGATCTTCCTTGAAGCTTCCAGCAAATAAAAGTGGGTCGAAATCATCGCAGAGCAAGACACAACGACCTTTACCAAATCCTGAAAAGAAATCTGCTGTCTCTGGGAGTGTAAGGTGGCCATCTCCAGAAAAGATTTCTTGGAATGTACTAGACCTCAAGAAGGAGAACTACTACTCTTGTTCTGTTGGGAGGACTCGTACAAATGCTCGATTTCTACTTCAGTCGTCAGATGATGTTGTCTCATTTCTGAAGGAATTGGCTGATGCATCTTCAGATTTTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009311 GO:0009312 GO:0009743 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009987 GO:0010033 GO:0010154 GO:0010182 GO:0016051 GO:0016311 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0033554 GO:0034637 GO:0035251 GO:0042221 GO:0042546 GO:0042578 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044464 GO:0046351 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051716 GO:0061458 GO:0065007 GO:0070413 GO:0070887 GO:0071310 GO:0071322 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

930

Amino Acids

105.22

Weight (kDa)

6.21

Isoelectric Point (pI)

47.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	91 - 556	1.1e-190	Glycosyltransferase family 20
Trehalose_PPase	PF02358	613 - 819	3.6e-58	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78580 AT1G78580 AT1G78580 AT1G78580
fragaria_vesca	FvH4_3g06590 FvH4_3g06590 FvH4_3g17650 FvH4_3g17650
malus_domestica	MD03G1250300.v1.1 MD10G1270400.v1.1 MD11G1270400.v1.1
prunus_persica	Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G071400_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1 Prupe.4G155900_v2.0.a1
pyrus_communis	pycom03g19800 pycom10g22630 pycom11g23920
rosa_chinensis	RchiOBHm_Chr5g0012561 RchiOBHm_Chr5g0029381
rosa_laevigata	RLG00000031925 RLG00000033160
rosa_multiflora	Rmu_sc0003577.1_g000012 Rmu_sc0004373.1_g000021
rosa_roxburghii	Rroxscaffold_1G00050580 Rroxscaffold_1G00064100
rosa_rugosa	Rorug05G0002400 Rorug05G0002400 Rorug05G0002500 Rorug05G0002600 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000 Rorug05G0114000
rosa_samantha	Rh5AG096400 Rh5AG205600 Rh5BG092600 Rh5BG204200 Rh5CG105500 Rh5DG092100 Rh5DG207800
rosa_wichuraiana	Rw5G008440 Rw5G018730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1705
AccB1I	GGYRCC	4 cut(s)	696, 1478, 1496, 1705
AccB7I	CCANNNNNTGG	1 cut(s)	1970
AciI	CCGC	2 cut(s)	271, 1482
AclI	AACGTT	1 cut(s)	1741
AclWI	GGATC	4 cut(s)	957, 1329, 1892, 2432
AcoI	YGGCCR	1 cut(s)	2624
AcsI	RAATTY	3 cut(s)	178, 798, 1334
AcuI	CTGAAG	5 cut(s)	957, 1596, 2711, 2763, 2777
AdeI	CACNNNGTG	1 cut(s)	2501
AfaI	GTAC	7 cut(s)	17, 931, 1707, 2379, 2420, 2655, 2707
AfiI	CCNNNNNNNGG	9 cut(s)	232, 499, 1638, 1639, 1970, 2157, 2278, 2329, 2668
AflIII	ACRYGT	1 cut(s)	1612
AjnI	CCWGG	4 cut(s)	4, 1317, 1632, 2497
AloI	GAACNNNNNNTCC	4 cut(s)	1207, 1239, 2325, 2357
AluBI	AGCT	8 cut(s)	215, 461, 829, 851, 1663, 1978, 1997, 2524
AluI	AGCT	8 cut(s)	215, 461, 829, 851, 1663, 1978, 1997, 2524
Alw21I	GWGCWC	4 cut(s)	672, 831, 1018, 1354
Alw26I	GTCTC	7 cut(s)	307, 1494, 1693, 1724, 1813, 2611, 2752
Alw44I	GTGCAC	1 cut(s)	1350
AlwI	GGATC	4 cut(s)	957, 1329, 1892, 2432
AlwNI	CAGNNNCTG	1 cut(s)	274
Ama87I	CYCGRG	1 cut(s)	966
AoxI	GGCC	4 cut(s)	222, 257, 548, 2624
ApaI	GGGCCC	1 cut(s)	226
ApaLI	GTGCAC	1 cut(s)	1350
ApeKI	GCWGC	9 cut(s)	209, 212, 215, 848, 974, 1192, 1994, 2086, 2312
ApoI	RAATTY	3 cut(s)	178, 798, 1334
ArsI	GACNNNNNNTTYG	2 cut(s)	744, 776
AseI	ATTAAT	1 cut(s)	1275
Asp700I	GAANNNNTTC	5 cut(s)	507, 994, 1149, 2340, 2512
Asp718I	GGTACC	1 cut(s)	1705
AspLEI	GCGC	2 cut(s)	837, 1687
AspS9I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2231
AsuC2I	CCSGG	1 cut(s)	2122
AsuHPI	GGTGA	5 cut(s)	332, 695, 1307, 2487, 2513
AsuII	TTCGAA	1 cut(s)	2133
AvaI	CYCGRG	1 cut(s)	966
AvaII	GGWCC	2 cut(s)	1453, 2231
AxyI	CCTNAGG	1 cut(s)	1391
BaeGI	GKGCMC	3 cut(s)	226, 451, 1354
BaeI	ACNNNNGTAYC	2 cut(s)	1662, 1695
BalI	TGGCCA	1 cut(s)	2626
BanI	GGYRCC	4 cut(s)	696, 1478, 1496, 1705
BanII	GRGCYC	2 cut(s)	226, 831
BarI	GAAGNNNNNNTAC	4 cut(s)	1282, 1314, 2660, 2692
BauI	CACGAG	1 cut(s)	2153
BbsI	GAAGAC	3 cut(s)	481, 2197, 2453
Bbv12I	GWGCWC	4 cut(s)	672, 831, 1018, 1354
BbvI	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 2006, 2098, 2324
BccI	CCATC	7 cut(s)	151, 402, 717, 823, 1391, 2028, 2635
BceAI	ACGGC	1 cut(s)	71
BciT130I	CCWGG	4 cut(s)	6, 1319, 1634, 2499
BciVI	GTATCC	1 cut(s)	491
BcnI	CCSGG	1 cut(s)	2122
BcoDI	GTCTC	7 cut(s)	307, 1494, 1693, 1724, 1813, 2611, 2752
BfaI	CTAG	3 cut(s)	1493, 1511, 2657
BfmI	CTRYAG	1 cut(s)	210
BfuI	GTATCC	1 cut(s)	491
BglII	AGATCT	1 cut(s)	2510
Bme1390I	CCNGG	5 cut(s)	6, 1319, 1634, 2122, 2499
Bme18I	GGWCC	2 cut(s)	1453, 2231
BmeT110I	CYCGRG	1 cut(s)	966
BmgT120I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2231
BmiI	GGNNCC	8 cut(s)	224, 551, 698, 1026, 1454, 1480, 1498, 1707
BmrFI	CCNGG	5 cut(s)	6, 1319, 1634, 2122, 2499
BmrI	ACTGGG	1 cut(s)	1784
BmsI	GCATC	7 cut(s)	104, 1429, 1867, 2227, 2255, 2761, 2783
BmuI	ACTGGG	1 cut(s)	1784
BoxI	GACNNNNGTC	2 cut(s)	1301, 2491
BpiI	GAAGAC	3 cut(s)	481, 2197, 2453
BplI	GAGNNNNNCTC	4 cut(s)	155, 187, 949, 981
BpmI	CTGGAG	1 cut(s)	2616
Bpu14I	TTCGAA	1 cut(s)	2133
BpuEI	CTTGAG	7 cut(s)	82, 157, 944, 1014, 1040, 1175, 2648
BpuMI	CCSGG	1 cut(s)	2122
Bsa29I	ATCGAT	1 cut(s)	1762
BsaBI	GATNNNNATC	1 cut(s)	999
BsaJI	CCNNGG	5 cut(s)	5, 565, 1520, 1632, 2120
BsaXI	ACNNNNNCTCC	4 cut(s)	2325, 2355, 2689, 2719
Bsc4I	CCNNNNNNNGG	9 cut(s)	232, 499, 1638, 1639, 1970, 2157, 2278, 2329, 2668
Bse118I	RCCGGY	1 cut(s)	2271
Bse1I	ACTGG	4 cut(s)	610, 1779, 1802, 2233
Bse21I	CCTNAGG	1 cut(s)	1391
Bse3DI	GCAATG	1 cut(s)	1900
Bse8I	GATNNNNATC	1 cut(s)	999
BseBI	CCWGG	4 cut(s)	6, 1319, 1634, 2499
BseCI	ATCGAT	1 cut(s)	1762
BseDI	CCNNGG	5 cut(s)	5, 565, 1520, 1632, 2120
BseGI	GGATG	9 cut(s)	143, 413, 1385, 1402, 1858, 2039, 2043, 2360, 2413
BseJI	GATNNNNATC	1 cut(s)	999
BseLI	CCNNNNNNNGG	9 cut(s)	232, 499, 1638, 1639, 1970, 2157, 2278, 2329, 2668
BseMI	GCAATG	1 cut(s)	1900
BseMII	CTCAG	6 cut(s)	277, 852, 1218, 1405, 1806, 1936
BseNI	ACTGG	4 cut(s)	610, 1779, 1802, 2233
BseSI	GKGCMC	3 cut(s)	226, 451, 1354
BseXI	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 2006, 2098, 2324
BseYI	CCCAGC	1 cut(s)	350
BsgI	GTGCAG	2 cut(s)	2105, 2331
BshFI	GGCC	4 cut(s)	224, 259, 550, 2626
BshNI	GGYRCC	4 cut(s)	696, 1478, 1496, 1705
BshVI	ATCGAT	1 cut(s)	1762
BsiHKAI	GWGCWC	4 cut(s)	672, 831, 1018, 1354
BsiHKCI	CYCGRG	1 cut(s)	966
BsiSI	CCGG	3 cut(s)	1500, 2122, 2272
BslFI	GGGAC	1 cut(s)	1289
BslI	CCNNNNNNNGG	9 cut(s)	232, 499, 1638, 1639, 1970, 2157, 2278, 2329, 2668
BsmAI	GTCTC	7 cut(s)	307, 1494, 1693, 1724, 1813, 2611, 2752
BsmBI	CGTCTC	2 cut(s)	307, 1813
BsmFI	GGGAC	1 cut(s)	1289
BsmI	GAATGC	1 cut(s)	912
BsnI	GGCC	4 cut(s)	224, 259, 550, 2626
BsoBI	CYCGRG	1 cut(s)	966
Bsp119I	TTCGAA	1 cut(s)	2133
Bsp120I	GGGCCC	1 cut(s)	222
Bsp1286I	GDGCHC	6 cut(s)	226, 451, 672, 831, 1018, 1354
Bsp19I	CCATGG	1 cut(s)	1520
BspACI	CCGC	2 cut(s)	271, 1482
BspANI	GGCC	4 cut(s)	224, 259, 550, 2626
BspCNI	CTCAG	6 cut(s)	276, 851, 1219, 1404, 1807, 1935
BspDI	ATCGAT	1 cut(s)	1762
BspHI	TCATGA	1 cut(s)	1255
BspLI	GGNNCC	8 cut(s)	224, 551, 698, 1026, 1454, 1480, 1498, 1707
BspMAI	CTGCAG	1 cut(s)	214
BspPI	GGATC	4 cut(s)	957, 1329, 1892, 2432
BspT104I	TTCGAA	1 cut(s)	2133
BspT107I	GGYRCC	4 cut(s)	696, 1478, 1496, 1705
BsrDI	GCAATG	1 cut(s)	1900
BsrFI	RCCGGY	1 cut(s)	2271
BsrI	ACTGG	4 cut(s)	610, 1779, 1802, 2233
BssAI	RCCGGY	1 cut(s)	2271
BssECI	CCNNGG	5 cut(s)	5, 565, 1520, 1632, 2120
BssSI	CACGAG	1 cut(s)	2153
BssT1I	CCWWGG	2 cut(s)	565, 1520
Bst2BI	CACGAG	1 cut(s)	2153
Bst2UI	CCWGG	4 cut(s)	6, 1319, 1634, 2499
Bst4CI	ACNGT	9 cut(s)	23, 105, 1303, 1356, 1488, 1675, 2324, 2348, 2382
Bst6I	CTCTTC	3 cut(s)	156, 672, 1572
BstAPI	GCANNNNNTGC	2 cut(s)	1349, 1358
BstBI	TTCGAA	1 cut(s)	2133
BstC8I	GCNNGC	4 cut(s)	904, 1432, 1752, 2289
BstDEI	CTNAG	8 cut(s)	263, 838, 1227, 1391, 1463, 1815, 1922, 1945
BstDSI	CCRYGG	1 cut(s)	1520
BstEII	GGTNACC	1 cut(s)	294
BstENI	CCTNNNNNAGG	3 cut(s)	230, 497, 2666
BstF5I	GGATG	9 cut(s)	143, 413, 1385, 1402, 1858, 2039, 2043, 2360, 2413
BstHHI	GCGC	2 cut(s)	837, 1687
BstMAI	GTCTC	7 cut(s)	307, 1494, 1693, 1724, 1813, 2611, 2752
BstMWI	GCNNNNNNNGC	7 cut(s)	215, 221, 244, 1349, 1358, 1481, 1597
BstNI	CCWGG	4 cut(s)	6, 1319, 1634, 2499
BstNSI	RCATGY	4 cut(s)	1434, 1616, 1987, 2093
BstPAI	GACNNNNGTC	2 cut(s)	1301, 2491
BstPI	GGTNACC	1 cut(s)	294
BstSCI	CCNGG	5 cut(s)	4, 1317, 1632, 2120, 2497
BstSFI	CTRYAG	1 cut(s)	210
BstSLI	GKGCMC	3 cut(s)	226, 451, 1354
BstV1I	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 2006, 2098, 2324
BstV2I	GAAGAC	3 cut(s)	481, 2197, 2453
BstX2I	RGATCY	2 cut(s)	2437, 2510
BstXI	CCANNNNNNTGG	1 cut(s)	566
BstYI	RGATCY	2 cut(s)	2437, 2510
Bsu15I	ATCGAT	1 cut(s)	1762
Bsu36I	CCTNAGG	1 cut(s)	1391
BsuI	GTATCC	1 cut(s)	491
BsuRI	GGCC	4 cut(s)	224, 259, 550, 2626
BsuTUI	ATCGAT	1 cut(s)	1762
BtgI	CCRYGG	1 cut(s)	1520
BtgZI	GCGATG	1 cut(s)	2538
BtsCI	GGATG	9 cut(s)	143, 413, 1385, 1402, 1858, 2039, 2043, 2360, 2413
BtsI	GCAGTG	4 cut(s)	363, 809, 1209, 1626
BtsIMutI	CAGTG	7 cut(s)	363, 809, 1209, 1352, 1626, 1809, 1930
Cac8I	GCNNGC	4 cut(s)	904, 1432, 1752, 2289
CaiI	CAGNNNCTG	1 cut(s)	274
CciI	TCATGA	1 cut(s)	1255
CfoI	GCGC	2 cut(s)	837, 1687
Cfr10I	RCCGGY	1 cut(s)	2271
Cfr13I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2231
ClaI	ATCGAT	1 cut(s)	1762
CsiI	ACCWGGT	1 cut(s)	2497
Csp6I	GTAC	7 cut(s)	16, 930, 1706, 2378, 2419, 2654, 2706
CviQI	GTAC	7 cut(s)	16, 930, 1706, 2378, 2419, 2654, 2706
DdeI	CTNAG	8 cut(s)	263, 838, 1227, 1391, 1463, 1815, 1922, 1945
DraIII	CACNNNGTG	1 cut(s)	2501
EaeI	YGGCCR	1 cut(s)	2624
Eam1104I	CTCTTC	3 cut(s)	156, 672, 1572
EarI	CTCTTC	3 cut(s)	156, 672, 1572
Ecl136II	GAGCTC	1 cut(s)	829
Eco130I	CCWWGG	2 cut(s)	565, 1520
Eco147I	AGGCCT	1 cut(s)	259
Eco24I	GRGCYC	2 cut(s)	226, 831
Eco47I	GGWCC	2 cut(s)	1453, 2231
Eco53kI	GAGCTC	1 cut(s)	829
Eco57I	CTGAAG	5 cut(s)	957, 1596, 2711, 2763, 2777
Eco81I	CCTNAGG	1 cut(s)	1391
Eco88I	CYCGRG	1 cut(s)	966
Eco91I	GGTNACC	1 cut(s)	294
EcoICRI	GAGCTC	1 cut(s)	829
EcoNI	CCTNNNNNAGG	3 cut(s)	230, 497, 2666
EcoO109I	RGGNCCY	3 cut(s)	222, 223, 1453
EcoO65I	GGTNACC	1 cut(s)	294
EcoRII	CCWGG	4 cut(s)	4, 1317, 1632, 2497
EcoT14I	CCWWGG	2 cut(s)	565, 1520
EcoT22I	ATGCAT	2 cut(s)	2248, 2776
EcoT38I	GRGCYC	2 cut(s)	226, 831
ErhI	CCWWGG	2 cut(s)	565, 1520
Esp3I	CGTCTC	2 cut(s)	307, 1813
FalI	AAGNNNNNCTT	6 cut(s)	573, 605, 945, 977, 1440, 1472
FaqI	GGGAC	1 cut(s)	1289
FokI	GGATG	9 cut(s)	130, 420, 1372, 1409, 1845, 2046, 2050, 2347, 2420
FriOI	GRGCYC	2 cut(s)	226, 831
FspBI	CTAG	3 cut(s)	1493, 1511, 2657
GlaI	GCGC	2 cut(s)	836, 1686
GsaI	CCCAGC	1 cut(s)	354
GsuI	CTGGAG	1 cut(s)	2616
HaeIII	GGCC	4 cut(s)	224, 259, 550, 2626
HapII	CCGG	3 cut(s)	1500, 2122, 2272
HhaI	GCGC	2 cut(s)	837, 1687
Hin6I	GCGC	2 cut(s)	835, 1685
HinP1I	GCGC	2 cut(s)	835, 1685
HindIII	AAGCTT	1 cut(s)	2522
HinfI	GANTC	6 cut(s)	326, 995, 1119, 1405, 1779, 2701
HpaII	CCGG	3 cut(s)	1500, 2122, 2272
HphI	GGTGA	5 cut(s)	332, 695, 1307, 2487, 2513
Hpy166II	GTNNAC	5 cut(s)	1352, 1516, 1807, 2344, 2419
Hpy8I	GTNNAC	5 cut(s)	1352, 1516, 1807, 2344, 2419
HpyAV	CCTTC	8 cut(s)	197, 628, 730, 798, 932, 2398, 2662, 2752
HpyCH4III	ACNGT	9 cut(s)	23, 105, 1303, 1356, 1488, 1675, 2324, 2348, 2382
HpyCH4IV	ACGT	4 cut(s)	36, 1371, 1741, 2017
HpyF10VI	GCNNNNNNNGC	7 cut(s)	215, 221, 244, 1349, 1358, 1481, 1597
HpyF3I	CTNAG	8 cut(s)	263, 838, 1227, 1391, 1463, 1815, 1922, 1945
HpySE526I	ACGT	4 cut(s)	36, 1371, 1741, 2017
HspAI	GCGC	2 cut(s)	835, 1685
KpnI	GGTACC	1 cut(s)	1709
LmnI	GCTCC	3 cut(s)	834, 1502, 1975
Lsp1109I	GCAGC	9 cut(s)	196, 202, 224, 860, 961, 1179, 2006, 2098, 2324
LweI	GCATC	7 cut(s)	104, 1429, 1867, 2227, 2255, 2761, 2783
MabI	ACCWGGT	1 cut(s)	2497
MaeI	CTAG	3 cut(s)	1493, 1511, 2657
MaeII	ACGT	4 cut(s)	36, 1371, 1741, 2017
MfeI	CAATTG	2 cut(s)	1548, 2316
MflI	RGATCY	2 cut(s)	2437, 2510
MhlI	GDGCHC	6 cut(s)	226, 451, 672, 831, 1018, 1354
MlsI	TGGCCA	1 cut(s)	2626
MluNI	TGGCCA	1 cut(s)	2626
MlyI	GAGTC	1 cut(s)	2695
MmeI	TCCRAC	1 cut(s)	1246
Mox20I	TGGCCA	1 cut(s)	2626
Mph1103I	ATGCAT	2 cut(s)	2248, 2776
MroXI	GAANNNNTTC	5 cut(s)	507, 994, 1149, 2340, 2512
MscI	TGGCCA	1 cut(s)	2626
MseI	TTAA	5 cut(s)	228, 663, 1113, 1275, 1793
MslI	CAYNNNNRTG	1 cut(s)	873
Msp20I	TGGCCA	1 cut(s)	2626
MspA1I	CMGCKG	4 cut(s)	215, 271, 851, 1997
MspI	CCGG	3 cut(s)	1500, 2122, 2272
MspR9I	CCNGG	5 cut(s)	6, 1319, 1634, 2122, 2499
MunI	CAATTG	2 cut(s)	1548, 2316
Mva1269I	GAATGC	1 cut(s)	912
MvaI	CCWGG	4 cut(s)	6, 1319, 1634, 2499
MwoI	GCNNNNNNNGC	7 cut(s)	215, 221, 244, 1349, 1358, 1481, 1597
NciI	CCSGG	1 cut(s)	2122
NcoI	CCATGG	1 cut(s)	1520
NlaIV	GGNNCC	8 cut(s)	224, 551, 698, 1026, 1454, 1480, 1498, 1707
NmuCI	GTSAC	8 cut(s)	361, 1175, 1381, 1615, 1931, 2124, 2299, 2493
NsiI	ATGCAT	2 cut(s)	2248, 2776
NspI	RCATGY	4 cut(s)	1434, 1616, 1987, 2093
NspV	TTCGAA	1 cut(s)	2133
PaeI	GCATGC	1 cut(s)	1434
PaeR7I	CTCGAG	1 cut(s)	966
PagI	TCATGA	1 cut(s)	1255
PceI	AGGCCT	1 cut(s)	259
PciI	ACATGT	1 cut(s)	1612
PcsI	WCGNNNNNNNCGW	2 cut(s)	1009, 1747
PctI	GAATGC	1 cut(s)	912
PdmI	GAANNNNTTC	5 cut(s)	507, 994, 1149, 2340, 2512
PfeI	GAWTC	5 cut(s)	326, 995, 1119, 1405, 1779
PflMI	CCANNNNNTGG	1 cut(s)	1970
PleI	GAGTC	1 cut(s)	2695
PpsI	GAGTC	1 cut(s)	2695
PpuMI	RGGWCCY	1 cut(s)	1453
PscI	ACATGT	1 cut(s)	1612
PshAI	GACNNNNGTC	2 cut(s)	1301, 2491
PshBI	ATTAAT	1 cut(s)	1275
Psp124BI	GAGCTC	1 cut(s)	831
Psp1406I	AACGTT	1 cut(s)	1741
Psp5II	RGGWCCY	1 cut(s)	1453
Psp6I	CCWGG	4 cut(s)	4, 1317, 1632, 2497
PspEI	GGTNACC	1 cut(s)	294
PspFI	CCCAGC	1 cut(s)	350
PspGI	CCWGG	4 cut(s)	4, 1317, 1632, 2497
PspN4I	GGNNCC	8 cut(s)	224, 551, 698, 1026, 1454, 1480, 1498, 1707
PspOMI	GGGCCC	1 cut(s)	222
PspPI	GGNCC	5 cut(s)	222, 223, 549, 1453, 2231
PspPPI	RGGWCCY	1 cut(s)	1453
PspXI	VCTCGAGB	1 cut(s)	966
PstI	CTGCAG	1 cut(s)	214
PstNI	CAGNNNCTG	1 cut(s)	274
PsuI	RGATCY	2 cut(s)	2437, 2510
PvuII	CAGCTG	3 cut(s)	215, 851, 1997
RsaI	GTAC	7 cut(s)	17, 931, 1707, 2379, 2420, 2655, 2707
RsaNI	GTAC	7 cut(s)	16, 930, 1706, 2378, 2419, 2654, 2706
RseI	CAYNNNNRTG	1 cut(s)	873
SacI	GAGCTC	1 cut(s)	831
SaqAI	TTAA	5 cut(s)	228, 663, 1113, 1275, 1793
Sau96I	GGNCC	5 cut(s)	222, 223, 549, 1453, 2231
SchI	GAGTC	1 cut(s)	2695
ScrFI	CCNGG	5 cut(s)	6, 1319, 1634, 2122, 2499
SduI	GDGCHC	6 cut(s)	226, 451, 672, 831, 1018, 1354
SexAI	ACCWGGT	1 cut(s)	2497
SfaNI	GCATC	7 cut(s)	104, 1429, 1867, 2227, 2255, 2761, 2783
SfcI	CTRYAG	1 cut(s)	210
Sfr274I	CTCGAG	1 cut(s)	966
SfuI	TTCGAA	1 cut(s)	2133
SinI	GGWCC	2 cut(s)	1453, 2231
SlaI	CTCGAG	1 cut(s)	966
SmiMI	CAYNNNNRTG	1 cut(s)	873
SmlI	CTYRAG	8 cut(s)	61, 172, 923, 966, 1019, 1029, 1154, 2663
SmoI	CTYRAG	8 cut(s)	61, 172, 923, 966, 1019, 1029, 1154, 2663
SphI	GCATGC	1 cut(s)	1434
SseBI	AGGCCT	1 cut(s)	259
SsiI	CCGC	2 cut(s)	271, 1482
SspI	AATATT	4 cut(s)	88, 518, 541, 2455
SspMI	CTAG	3 cut(s)	1493, 1511, 2657
SstI	GAGCTC	1 cut(s)	831
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	5 cut(s)	4, 1317, 1632, 2120, 2497
StyI	CCWWGG	2 cut(s)	565, 1520
TaaI	ACNGT	9 cut(s)	23, 105, 1303, 1356, 1488, 1675, 2324, 2348, 2382
TaiI	ACGT	4 cut(s)	39, 1374, 1744, 2020
TatI	WGTACW	4 cut(s)	15, 2377, 2418, 2653
TauI	GCSGC	2 cut(s)	274, 1484
TfiI	GAWTC	5 cut(s)	326, 995, 1119, 1405, 1779
Tru1I	TTAA	5 cut(s)	228, 663, 1113, 1275, 1793
Tru9I	TTAA	5 cut(s)	228, 663, 1113, 1275, 1793
TscAI	CASTG	7 cut(s)	370, 816, 1209, 1359, 1633, 1809, 1930
TseFI	GTSAC	8 cut(s)	361, 1175, 1381, 1615, 1931, 2124, 2299, 2493
TseI	GCWGC	9 cut(s)	209, 212, 215, 848, 974, 1192, 1994, 2086, 2312
Tsp45I	GTSAC	8 cut(s)	361, 1175, 1381, 1615, 1931, 2124, 2299, 2493
TspGWI	ACGGA	2 cut(s)	1708, 2499
TspRI	CASTG	7 cut(s)	370, 816, 1209, 1359, 1633, 1809, 1930
Van91I	CCANNNNNTGG	1 cut(s)	1970
VneI	GTGCAC	1 cut(s)	1350
VpaK11BI	GGWCC	2 cut(s)	1453, 2231
VspI	ATTAAT	1 cut(s)	1275
XagI	CCTNNNNNAGG	3 cut(s)	230, 497, 2666
XapI	RAATTY	3 cut(s)	178, 798, 1334
XceI	RCATGY	4 cut(s)	1434, 1616, 1987, 2093
XhoI	CTCGAG	1 cut(s)	966
XmnI	GAANNNNTTC	5 cut(s)	507, 994, 1149, 2340, 2512
XspI	CTAG	3 cut(s)	1493, 1511, 2657
Zsp2I	ATGCAT	2 cut(s)	2248, 2776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.