Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010187

Physical Location & Seq

Genomic Coordinates Reverse (-)

42821039 .. 42824922

Gene Structure 3884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1316600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGAAGATAGTAATGCGTGGCCCATACTTCATTTTCGACGTCGCGGCCTCCGGTCCGGTTCCAGAAGGAATGCGCATCAACGGAAGCGTATCCAACGTGGCAGATTATGATTGGGTGGAACAACCATACGTTCAACGTGATTGGCTAATTTTGGAGGAAAACACGTTGCGATATGCAATTGATACTTTGACACAAACTCGGGAATTGACCAAAAAGTGTGTTCAACGTTCATACAGTTTGTTTGGAGAGGAAATCAAATCACAACCAACGGACCAACGAACCAACTCAACACTCCATTCCACGACTTCCCAGGTCTCAGGACTCTCAGGGACTCTCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACCCTCGGACCCGCTGTCCGCCGAAGCCAGTCGAGCTACTGTTTCTATTGTCTCTCATTGAATTCAATCGAACAGAGAGAGTTTGAGTGGTTGGGGGTAGATCCACCATCCAAGCCCAGATCTTTCTTTGCGATGGCGCACCACAGAAACAAGCTGTTACTTGTGTTCCTCTTCTTCCTCTCCTTCGCTGTCGCCGCCCTCATTGCGGCCGCAGGGAAGAGCTATTATGAAATACTGCAGGTGCCCAAGGGAGCCTCCGACGAGCAGATCAAGAGGGCTTACCGGAAGCTCGCCTTGAAGTACCATCCTGATAAGAACCCCGGCAACGAAGAGGCCAACAAACGATTCGCCGACATTAACAATGCATACGAGGTGCTTTCGGATAGCGAGAAGAGGAACATATACGATAGGTACGGAGAAGATGGTTTGAAACAGCATGCAGCTAGTGGAGGCCGAGGTGGCGGCGGCATGGGAATGAACATCAACGACATTTTTTCCGAGTTTTTTGGTGGTGGACGCCCTACTGAAGAAGAAGATAGAATCATCAAGGGAGAAGATGTAGTCGTTGAATTGGATGCAACATTGGAAGACCTCTATATGGGAGGCTCGTTAAAGGTTTGGAGGGAGAAGAACATTCTGAAGCCAGCACCAGGGAAGAGACGATGTAACTGCAGAAATGAGGTATATCACAGGCAAATCGGTCCAGGGATGTTCCAACAGATGACAGAACAGGTCTGTGACCAATGTTCCAATGTCAAATATGAAAGGGAGGGATATTTTGTTACTGTTGATATTGAGAAAGGGATGCAAGATGGGCAAGAGGTGGTCTTCTATGAAGATGGTGAACCTATAATTGATGGAGAACCTGGAGATCTAAAATTCCGCATCCGCACAGCAGCTCACGACCGGTTCAAAAGGGAAGGCAACGACTTACACACAACTATCACTATCACACTGGTTCAAGCTCTTGTTGGCTTTGAGAAGACTGTTAAGCACCTTGATGATCATTTGGTGGACATTAGCTCAAAGGGAATCACAAGGCCCAAGGAAGTGAGGAAATTCAAAGGGGAAGGGATGCCTCTACATTTCAGCAACAAGAAAGGAGATTTGTACGTAACATTTGAGGTTTTATTCCCGAACTCGCTAACAGATGATCAAAAGACAAAGATCAAGGCGGTTCTGGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0005886 GO:0008150 GO:0009605 GO:0009607 GO:0012505 GO:0016020 GO:0031347 GO:0031349 GO:0031974 GO:0032991 GO:0034663 GO:0035821 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044003 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0065007 GO:0070013 GO:0071944 GO:0075136 GO:0080134

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

DnaJ DnaJ_C

Protein Analysis

519

Amino Acids

59.11

Weight (kDa)

8.71

Isoelectric Point (pI)

50.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	197 - 259	9.4e-29	DnaJ domain
DnaJ_C	PF01556	311 - 502	7.4e-34	DnaJ C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62600
fragaria_vesca	FvH4_5g39520 FvH4_5g39520
malus_domestica	MD03G1297000.v1.1 MD11G1316600.v1.1
prunus_persica	Prupe.8G270200_v2.0.a1
pyrus_communis	pycom03g23550 pycom11g27630
rosa_chinensis	RchiOBHm_Chr7g0241831
rosa_laevigata	RLG00000000540
rosa_multiflora	Rmu_co8135076.1_g000001 Rmu_sc0001865.1_g000009 Rmu_sc0017162.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218630
rosa_rugosa	Rorug07G0347600 Rorug07G0347700 Rorug07G0347800
rosa_samantha	Rh7AG501900 Rh7BG473300 Rh7CG518400
rosa_wichuraiana	Rw7G042430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	598
AatII	GACGTC	1 cut(s)	42
Acc16I	TGCGCA	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	598
AccB1I	GGYRCC	1 cut(s)	610
AccII	CGCG	1 cut(s)	44
AclI	AACGTT	1 cut(s)	226
AclWI	GGATC	1 cut(s)	464
AcoI	YGGCCR	1 cut(s)	576
AcsI	RAATTY	3 cut(s)	430, 1247, 1427
AcuI	CTGAAG	2 cut(s)	915, 1028
AcyI	GRCGYC	2 cut(s)	39, 886
AfaI	GTAC	3 cut(s)	671, 782, 1481
AfiI	CCNNNNNNNGG	3 cut(s)	574, 967, 1019
AflIII	ACRYGT	1 cut(s)	162
AgeI	ACCGGT	1 cut(s)	1275
AhdI	GACNNNNNGTC	1 cut(s)	383
AjnI	CCWGG	4 cut(s)	309, 1018, 1072, 1234
AjuI	GAANNNNNNNTTGG	2 cut(s)	698, 730
AluBI	AGCT	8 cut(s)	405, 523, 591, 658, 812, 1268, 1334, 1392
AluI	AGCT	8 cut(s)	405, 523, 591, 658, 812, 1268, 1334, 1392
Alw26I	GTCTC	3 cut(s)	319, 425, 1021
AlwI	GGATC	1 cut(s)	464
Ama87I	CYCGRG	1 cut(s)	198
AoxI	GGCC	6 cut(s)	19, 45, 576, 702, 820, 1409
ApeKI	GCWGC	2 cut(s)	809, 1265
ApoI	RAATTY	3 cut(s)	430, 1247, 1427
AsiGI	ACCGGT	1 cut(s)	1275
AspLEI	GCGC	2 cut(s)	75, 508
AspS9I	GGNCC	7 cut(s)	20, 53, 271, 369, 377, 1070, 1410
AsuC2I	CCSGG	1 cut(s)	690
AsuHPI	GGTGA	1 cut(s)	1223
AvaI	CYCGRG	1 cut(s)	198
AvaII	GGWCC	5 cut(s)	53, 271, 369, 377, 1070
BaeGI	GKGCMC	1 cut(s)	615
BanI	GGYRCC	1 cut(s)	610
BbsI	GAAGAC	3 cut(s)	963, 1189, 1358
BbvI	GCAGC	2 cut(s)	821, 1277
BccI	CCATC	7 cut(s)	484, 496, 681, 785, 1175, 1202, 1220
BcgI	CGANNNNNNTGC	2 cut(s)	1020, 1054
BciT130I	CCWGG	4 cut(s)	311, 1020, 1074, 1236
BciVI	GTATCC	1 cut(s)	100
BclI	TGATCA	2 cut(s)	1372, 1522
BcnI	CCSGG	1 cut(s)	690
BcoDI	GTCTC	3 cut(s)	319, 425, 1021
BfaI	CTAG	1 cut(s)	813
BfmI	CTRYAG	2 cut(s)	605, 1039
BfuAI	ACCTGC	1 cut(s)	598
BfuI	GTATCC	1 cut(s)	100
BglI	GCCNNNNNGGC	1 cut(s)	828
BglII	AGATCT	2 cut(s)	488, 1240
BisI	GCNGC	8 cut(s)	45, 564, 576, 579, 810, 832, 835, 1266
BlsI	GCNGC	8 cut(s)	46, 565, 577, 580, 811, 833, 836, 1267
Bme1390I	CCNGG	5 cut(s)	311, 690, 1020, 1074, 1236
Bme18I	GGWCC	5 cut(s)	53, 271, 369, 377, 1070
BmeRI	GACNNNNNGTC	1 cut(s)	383
BmeT110I	CYCGRG	1 cut(s)	198
BmgT120I	GGNCC	7 cut(s)	20, 53, 271, 369, 377, 1070, 1410
BmiI	GGNNCC	5 cut(s)	60, 371, 379, 612, 622
BmrFI	CCNGG	5 cut(s)	311, 690, 1020, 1074, 1236
BmsI	GCATC	5 cut(s)	84, 934, 1164, 1263, 1434
BpiI	GAAGAC	3 cut(s)	963, 1189, 1358
BpmI	CTGGAG	2 cut(s)	358, 1257
BpuMI	CCSGG	1 cut(s)	690
BsaAI	YACGTR	1 cut(s)	1483
BsaHI	GRCGYC	2 cut(s)	39, 886
BsaI	GGTCTC	1 cut(s)	319
BsaJI	CCNNGG	8 cut(s)	309, 373, 615, 688, 823, 1019, 1073, 1413
BsaWI	WCCGGW	4 cut(s)	50, 55, 651, 1275
BsaXI	ACNNNNNCTCC	2 cut(s)	912, 942
Bsc4I	CCNNNNNNNGG	3 cut(s)	574, 967, 1019
Bse118I	RCCGGY	1 cut(s)	1275
Bse1I	ACTGG	2 cut(s)	397, 1329
Bse3DI	GCAATG	1 cut(s)	570
BseBI	CCWGG	4 cut(s)	311, 1020, 1074, 1236
BseDI	CCNNGG	8 cut(s)	309, 373, 615, 688, 823, 1019, 1073, 1413
BseGI	GGATG	7 cut(s)	476, 673, 949, 1083, 1179, 1254, 1449
BseLI	CCNNNNNNNGG	3 cut(s)	574, 967, 1019
BseMI	GCAATG	1 cut(s)	570
BseMII	CTCAG	2 cut(s)	330, 339
BseNI	ACTGG	2 cut(s)	397, 1329
BseRI	GAGGAG	9 cut(s)	355, 358, 361, 364, 367, 370, 373, 376, 379
BseSI	GKGCMC	1 cut(s)	615
BseX3I	CGGCCG	1 cut(s)	576
BseXI	GCAGC	2 cut(s)	821, 1277
Bsh1236I	CGCG	1 cut(s)	44
Bsh1285I	CGRYCG	2 cut(s)	579, 1276
BshFI	GGCC	6 cut(s)	21, 47, 578, 704, 822, 1411
BshNI	GGYRCC	1 cut(s)	610
BshTI	ACCGGT	1 cut(s)	1275
BsiEI	CGRYCG	2 cut(s)	579, 1276
BsiHKCI	CYCGRG	1 cut(s)	198
BsiSI	CCGG	5 cut(s)	51, 56, 652, 690, 1276
BslFI	GGGAC	1 cut(s)	343
BslI	CCNNNNNNNGG	3 cut(s)	574, 967, 1019
BsmAI	GTCTC	3 cut(s)	319, 425, 1021
BsmBI	CGTCTC	1 cut(s)	1021
BsmFI	GGGAC	1 cut(s)	343
BsmI	GAATGC	1 cut(s)	75
BsnI	GGCC	6 cut(s)	21, 47, 578, 704, 822, 1411
Bso31I	GGTCTC	1 cut(s)	319
BsoBI	CYCGRG	1 cut(s)	198
Bsp1286I	GDGCHC	1 cut(s)	615
Bsp143I	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
BspANI	GGCC	6 cut(s)	21, 47, 578, 704, 822, 1411
BspCNI	CTCAG	2 cut(s)	329, 338
BspFNI	CGCG	1 cut(s)	44
BspLI	GGNNCC	5 cut(s)	60, 371, 379, 612, 622
BspMAI	CTGCAG	2 cut(s)	609, 1043
BspMI	ACCTGC	1 cut(s)	598
BspPI	GGATC	1 cut(s)	464
BspQI	GCTCTTC	1 cut(s)	581
BspT107I	GGYRCC	1 cut(s)	610
BspTNI	GGTCTC	1 cut(s)	319
BsrDI	GCAATG	1 cut(s)	570
BsrFI	RCCGGY	1 cut(s)	1275
BsrI	ACTGG	2 cut(s)	397, 1329
BssAI	RCCGGY	1 cut(s)	1275
BssECI	CCNNGG	8 cut(s)	309, 373, 615, 688, 823, 1019, 1073, 1413
BssMI	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
BssNI	GRCGYC	2 cut(s)	39, 886
BssT1I	CCWWGG	2 cut(s)	615, 1413
Bst2UI	CCWGG	4 cut(s)	311, 1020, 1074, 1236
Bst4CI	ACNGT	4 cut(s)	236, 410, 1156, 1357
Bst6I	CTCTTC	5 cut(s)	545, 581, 693, 755, 1019
BstACI	GRCGYC	2 cut(s)	39, 886
BstBAI	YACGTR	1 cut(s)	1483
BstC8I	GCNNGC	3 cut(s)	660, 807, 1014
BstDEI	CTNAG	2 cut(s)	316, 325
BstF5I	GGATG	7 cut(s)	476, 673, 949, 1083, 1179, 1254, 1449
BstFNI	CGCG	1 cut(s)	44
BstHHI	GCGC	2 cut(s)	75, 508
BstKTI	GATC	7 cut(s)	472, 491, 639, 1243, 1375, 1525, 1539
BstMAI	GTCTC	3 cut(s)	319, 425, 1021
BstMBI	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
BstMCI	CGRYCG	2 cut(s)	579, 1276
BstMWI	GCNNNNNNNGC	5 cut(s)	402, 563, 572, 828, 1183
BstNI	CCWGG	4 cut(s)	311, 1020, 1074, 1236
BstNSI	RCATGY	1 cut(s)	809
BstSCI	CCNGG	5 cut(s)	309, 688, 1018, 1072, 1234
BstSFI	CTRYAG	2 cut(s)	605, 1039
BstSLI	GKGCMC	1 cut(s)	615
BstSNI	TACGTA	1 cut(s)	1483
BstUI	CGCG	1 cut(s)	44
BstV1I	GCAGC	2 cut(s)	821, 1277
BstV2I	GAAGAC	3 cut(s)	963, 1189, 1358
BstX2I	RGATCY	3 cut(s)	469, 488, 1240
BstYI	RGATCY	3 cut(s)	469, 488, 1240
BstZI	CGGCCG	1 cut(s)	576
BsuI	GTATCC	1 cut(s)	100
BsuRI	GGCC	6 cut(s)	21, 47, 578, 704, 822, 1411
BtgZI	GCGATG	1 cut(s)	515
BtsCI	GGATG	7 cut(s)	476, 673, 949, 1083, 1179, 1254, 1449
BtsIMutI	CAGTG	1 cut(s)	1322
BveI	ACCTGC	1 cut(s)	598
Cac8I	GCNNGC	3 cut(s)	660, 807, 1014
CciNI	GCGGCCGC	1 cut(s)	576
CfoI	GCGC	2 cut(s)	75, 508
Cfr10I	RCCGGY	1 cut(s)	1275
Cfr13I	GGNCC	7 cut(s)	20, 53, 271, 369, 377, 1070, 1410
CpoI	CGGWCCG	1 cut(s)	53
CseI	GACGC	1 cut(s)	894
Csp6I	GTAC	3 cut(s)	670, 781, 1480
CspAI	ACCGGT	1 cut(s)	1275
CspI	CGGWCCG	1 cut(s)	53
CviAII	CATG	2 cut(s)	806, 838
CviQI	GTAC	3 cut(s)	670, 781, 1480
DdeI	CTNAG	2 cut(s)	316, 325
DpnI	GATC	7 cut(s)	471, 490, 638, 1242, 1374, 1524, 1538
DpnII	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
DriI	GACNNNNNGTC	1 cut(s)	383
EaeI	YGGCCR	1 cut(s)	576
EagI	CGGCCG	1 cut(s)	576
Eam1104I	CTCTTC	5 cut(s)	545, 581, 693, 755, 1019
Eam1105I	GACNNNNNGTC	1 cut(s)	383
EarI	CTCTTC	5 cut(s)	545, 581, 693, 755, 1019
EciI	GGCGGA	1 cut(s)	377
EclXI	CGGCCG	1 cut(s)	576
Eco105I	TACGTA	1 cut(s)	1483
Eco130I	CCWWGG	2 cut(s)	615, 1413
Eco31I	GGTCTC	1 cut(s)	319
Eco47I	GGWCC	5 cut(s)	53, 271, 369, 377, 1070
Eco52I	CGGCCG	1 cut(s)	576
Eco57I	CTGAAG	2 cut(s)	915, 1028
Eco88I	CYCGRG	1 cut(s)	198
EcoO109I	RGGNCCY	1 cut(s)	369
EcoRI	GAATTC	1 cut(s)	430
EcoRII	CCWGG	4 cut(s)	309, 1018, 1072, 1234
EcoT14I	CCWWGG	2 cut(s)	615, 1413
EcoT22I	ATGCAT	1 cut(s)	736
ErhI	CCWWGG	2 cut(s)	615, 1413
Esp3I	CGTCTC	1 cut(s)	1021
FaeI	CATG	2 cut(s)	809, 841
FalI	AAGNNNNNCTT	2 cut(s)	647, 679
FaqI	GGGAC	1 cut(s)	343
FatI	CATG	2 cut(s)	805, 837
FauI	CCCGC	1 cut(s)	388
FbaI	TGATCA	2 cut(s)	1372, 1522
Fnu4HI	GCNGC	8 cut(s)	45, 564, 576, 579, 810, 832, 835, 1266
FokI	GGATG	7 cut(s)	463, 660, 956, 1090, 1186, 1241, 1456
Fsp4HI	GCNGC	8 cut(s)	45, 564, 576, 579, 810, 832, 835, 1266
FspAI	RTGCGCAY	1 cut(s)	74
FspBI	CTAG	1 cut(s)	813
FspI	TGCGCA	1 cut(s)	74
GlaI	GCGC	2 cut(s)	74, 507
GluI	GCNGC	8 cut(s)	45, 564, 576, 579, 810, 832, 835, 1266
GsuI	CTGGAG	2 cut(s)	358, 1257
HaeIII	GGCC	6 cut(s)	21, 47, 578, 704, 822, 1411
HapII	CCGG	5 cut(s)	51, 56, 652, 690, 1276
HgaI	GACGC	1 cut(s)	894
HhaI	GCGC	2 cut(s)	75, 508
Hin1I	GRCGYC	2 cut(s)	39, 886
Hin1II	CATG	2 cut(s)	809, 841
Hin6I	GCGC	2 cut(s)	73, 506
HinP1I	GCGC	2 cut(s)	73, 506
HinfI	GANTC	5 cut(s)	321, 331, 714, 909, 1401
HpaII	CCGG	5 cut(s)	51, 56, 652, 690, 1276
HphI	GGTGA	1 cut(s)	1223
Hpy166II	GTNNAC	3 cut(s)	884, 1214, 1384
Hpy188I	TCNGA	5 cut(s)	377, 628, 751, 868, 1008
Hpy188III	TCNNGA	8 cut(s)	62, 200, 318, 337, 640, 677, 1271, 1504
Hpy8I	GTNNAC	3 cut(s)	884, 1214, 1384
Hpy99I	CGWCG	3 cut(s)	41, 44, 632
HpyAV	CCTTC	4 cut(s)	59, 562, 1283, 1433
HpyCH4III	ACNGT	4 cut(s)	236, 410, 1156, 1357
HpyCH4IV	ACGT	7 cut(s)	39, 96, 129, 136, 164, 226, 1482
HpyCH4V	TGCA	7 cut(s)	176, 607, 734, 809, 947, 1041, 1177
HpyF10VI	GCNNNNNNNGC	5 cut(s)	402, 563, 572, 828, 1183
HpyF3I	CTNAG	2 cut(s)	316, 325
HpySE526I	ACGT	7 cut(s)	39, 96, 129, 136, 164, 226, 1482
Hsp92I	GRCGYC	2 cut(s)	39, 886
Hsp92II	CATG	2 cut(s)	809, 841
HspAI	GCGC	2 cut(s)	73, 506
Ksp22I	TGATCA	2 cut(s)	1372, 1522
Kzo9I	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
LguI	GCTCTTC	1 cut(s)	581
LmnI	GCTCC	1 cut(s)	620
Lsp1109I	GCAGC	2 cut(s)	821, 1277
LweI	GCATC	5 cut(s)	84, 934, 1164, 1263, 1434
MaeI	CTAG	1 cut(s)	813
MaeII	ACGT	7 cut(s)	39, 96, 129, 136, 164, 226, 1482
MaeIII	GTNAC	5 cut(s)	525, 1034, 1106, 1150, 1483
MalI	GATC	7 cut(s)	471, 490, 638, 1242, 1374, 1524, 1538
MboI	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
MfeI	CAATTG	1 cut(s)	177
MflI	RGATCY	3 cut(s)	469, 488, 1240
MhlI	GDGCHC	1 cut(s)	615
MluCI	AATT	8 cut(s)	147, 177, 203, 430, 938, 1221, 1247, 1427
MlyI	GAGTC	2 cut(s)	315, 325
MmeI	TCCRAC	3 cut(s)	117, 651, 1108
Mph1103I	ATGCAT	1 cut(s)	736
MseI	TTAA	3 cut(s)	726, 980, 1359
MslI	CAYNNNNRTG	2 cut(s)	842, 1368
MspA1I	CMGCKG	1 cut(s)	383
MspI	CCGG	5 cut(s)	51, 56, 652, 690, 1276
MspR9I	CCNGG	5 cut(s)	311, 690, 1020, 1074, 1236
MunI	CAATTG	1 cut(s)	177
Mva1269I	GAATGC	1 cut(s)	75
MvaI	CCWGG	4 cut(s)	311, 1020, 1074, 1236
MvnI	CGCG	1 cut(s)	44
MwoI	GCNNNNNNNGC	5 cut(s)	402, 563, 572, 828, 1183
NciI	CCSGG	1 cut(s)	690
NdeII	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
NlaIII	CATG	2 cut(s)	809, 841
NlaIV	GGNNCC	5 cut(s)	60, 371, 379, 612, 622
NmeAIII	GCCGAG	1 cut(s)	848
NmuCI	GTSAC	1 cut(s)	1106
NotI	GCGGCCGC	1 cut(s)	576
NsbI	TGCGCA	1 cut(s)	74
NsiI	ATGCAT	1 cut(s)	736
NspI	RCATGY	1 cut(s)	809
PaeI	GCATGC	1 cut(s)	809
PaqCI	CACCTGC	1 cut(s)	598
PciSI	GCTCTTC	1 cut(s)	581
PctI	GAATGC	1 cut(s)	75
PfeI	GAWTC	3 cut(s)	714, 909, 1401
PinAI	ACCGGT	1 cut(s)	1275
PkrI	GCNGC	8 cut(s)	46, 565, 577, 580, 811, 833, 836, 1267
PleI	GAGTC	2 cut(s)	315, 325
PpsI	GAGTC	2 cut(s)	315, 325
Ppu21I	YACGTR	1 cut(s)	1483
PpuMI	RGGWCCY	1 cut(s)	369
Psp1406I	AACGTT	1 cut(s)	226
Psp5II	RGGWCCY	1 cut(s)	369
Psp6I	CCWGG	4 cut(s)	309, 1018, 1072, 1234
PspGI	CCWGG	4 cut(s)	309, 1018, 1072, 1234
PspN4I	GGNNCC	5 cut(s)	60, 371, 379, 612, 622
PspPI	GGNCC	7 cut(s)	20, 53, 271, 369, 377, 1070, 1410
PspPPI	RGGWCCY	1 cut(s)	369
PstI	CTGCAG	2 cut(s)	609, 1043
PsuI	RGATCY	3 cut(s)	469, 488, 1240
RsaI	GTAC	3 cut(s)	671, 782, 1481
RsaNI	GTAC	3 cut(s)	670, 781, 1480
RseI	CAYNNNNRTG	2 cut(s)	842, 1368
Rsr2I	CGGWCCG	1 cut(s)	53
RsrII	CGGWCCG	1 cut(s)	53
SapI	GCTCTTC	1 cut(s)	581
SaqAI	TTAA	3 cut(s)	726, 980, 1359
SatI	GCNGC	8 cut(s)	45, 564, 576, 579, 810, 832, 835, 1266
Sau3AI	GATC	7 cut(s)	469, 488, 636, 1240, 1372, 1522, 1536
Sau96I	GGNCC	7 cut(s)	20, 53, 271, 369, 377, 1070, 1410
SchI	GAGTC	2 cut(s)	315, 325
ScrFI	CCNGG	5 cut(s)	311, 690, 1020, 1074, 1236
SduI	GDGCHC	1 cut(s)	615
SfaNI	GCATC	5 cut(s)	84, 934, 1164, 1263, 1434
SfcI	CTRYAG	2 cut(s)	605, 1039
SinI	GGWCC	5 cut(s)	53, 271, 369, 377, 1070
SmiMI	CAYNNNNRTG	2 cut(s)	842, 1368
SnaBI	TACGTA	1 cut(s)	1483
SphI	GCATGC	1 cut(s)	809
Sse9I	AATT	8 cut(s)	147, 177, 203, 430, 938, 1221, 1247, 1427
SspMI	CTAG	1 cut(s)	813
StyD4I	CCNGG	5 cut(s)	309, 688, 1018, 1072, 1234
StyI	CCWWGG	2 cut(s)	615, 1413
TaaI	ACNGT	4 cut(s)	236, 410, 1156, 1357
TaiI	ACGT	7 cut(s)	42, 99, 132, 139, 167, 229, 1485
TaqI	TCGA	3 cut(s)	36, 401, 438
TaqII	GACCGA	1 cut(s)	1058
TasI	AATT	8 cut(s)	147, 177, 203, 430, 938, 1221, 1247, 1427
TauI	GCSGC	6 cut(s)	47, 566, 578, 581, 834, 837
TfiI	GAWTC	3 cut(s)	714, 909, 1401
Tru1I	TTAA	3 cut(s)	726, 980, 1359
Tru9I	TTAA	3 cut(s)	726, 980, 1359
TscAI	CASTG	1 cut(s)	1329
TseFI	GTSAC	1 cut(s)	1106
TseI	GCWGC	2 cut(s)	809, 1265
Tsp45I	GTSAC	1 cut(s)	1106
TspDTI	ATGAA	7 cut(s)	17, 19, 219, 612, 860, 1146, 1218
TspGWI	ACGGA	3 cut(s)	96, 284, 798
TspRI	CASTG	1 cut(s)	1329
VpaK11BI	GGWCC	5 cut(s)	53, 271, 369, 377, 1070
XapI	RAATTY	3 cut(s)	430, 1247, 1427
XceI	RCATGY	1 cut(s)	809
XspI	CTAG	1 cut(s)	813
ZraI	GACGTC	1 cut(s)	40
Zsp2I	ATGCAT	1 cut(s)	736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.