DnaJ homolog subfamily B member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62600 |
| fragaria_vesca | FvH4_5g39520 FvH4_5g39520 |
| malus_domestica | MD03G1297000.v1.1 MD11G1316600.v1.1 |
| prunus_persica | Prupe.8G270200_v2.0.a1 |
| pyrus_communis | pycom03g23550 pycom11g27630 |
| rosa_chinensis | RchiOBHm_Chr7g0241831 |
| rosa_laevigata | RLG00000000540 |
| rosa_multiflora | Rmu_co8135076.1_g000001 Rmu_sc0001865.1_g000009 Rmu_sc0017162.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00218630 |
| rosa_rugosa | Rorug07G0347600 Rorug07G0347700 Rorug07G0347800 |
| rosa_samantha | Rh7AG501900 Rh7BG473300 Rh7CG518400 |
| rosa_wichuraiana | Rw7G042430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 564 |
| AccB1I | GGYRCC | 1 cut(s) | 511 |
| AciI | CCGC | 3 cut(s) | 69, 306, 327 |
| AclWI | GGATC | 1 cut(s) | 1040 |
| AcsI | RAATTY | 3 cut(s) | 209, 743, 923 |
| AfaI | GTAC | 2 cut(s) | 167, 977 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 37, 78, 463, 515 |
| AgsI | TTSAA | 3 cut(s) | 478, 827, 928 |
| AjiI | CACGTC | 1 cut(s) | 1005 |
| AjnI | CCWGG | 3 cut(s) | 462, 514, 568 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 11, 43 |
| AluBI | AGCT | 5 cut(s) | 22, 87, 154, 731, 830 |
| AluI | AGCT | 5 cut(s) | 22, 87, 154, 731, 830 |
| Alw26I | GTCTC | 2 cut(s) | 517, 729 |
| AlwI | GGATC | 1 cut(s) | 1040 |
| AoxI | GGCC | 1 cut(s) | 905 |
| ApoI | RAATTY | 3 cut(s) | 209, 743, 923 |
| AspLEI | GCGC | 2 cut(s) | 7, 50 |
| AspS9I | GGNCC | 2 cut(s) | 566, 906 |
| AsuHPI | GGTGA | 2 cut(s) | 428, 719 |
| AvaII | GGWCC | 1 cut(s) | 566 |
| BanI | GGYRCC | 1 cut(s) | 511 |
| BanII | GRGCYC | 1 cut(s) | 714 |
| BbsI | GAAGAC | 4 cut(s) | 399, 459, 854, 1031 |
| BccI | CCATC | 6 cut(s) | 177, 671, 698, 716, 815, 860 |
| BciT130I | CCWGG | 3 cut(s) | 464, 516, 570 |
| BciVI | GTATCC | 1 cut(s) | 761 |
| BclI | TGATCA | 1 cut(s) | 868 |
| BcoDI | GTCTC | 2 cut(s) | 517, 729 |
| BfaI | CTAG | 1 cut(s) | 309 |
| BfuI | GTATCC | 1 cut(s) | 761 |
| BglII | AGATCT | 1 cut(s) | 970 |
| BisI | GCNGC | 2 cut(s) | 69, 306 |
| BlsI | GCNGC | 2 cut(s) | 70, 307 |
| Bme1390I | CCNGG | 3 cut(s) | 464, 516, 570 |
| Bme18I | GGWCC | 1 cut(s) | 566 |
| BmgBI | CACGTC | 1 cut(s) | 1005 |
| BmgT120I | GGNCC | 2 cut(s) | 566, 906 |
| BmiI | GGNNCC | 2 cut(s) | 118, 513 |
| BmrFI | CCNGG | 3 cut(s) | 464, 516, 570 |
| BmsI | GCATC | 4 cut(s) | 16, 430, 660, 930 |
| BpiI | GAAGAC | 4 cut(s) | 399, 459, 854, 1031 |
| BpmI | CTGGAG | 1 cut(s) | 753 |
| BpuEI | CTTGAG | 1 cut(s) | 146 |
| BsaAI | YACGTR | 1 cut(s) | 979 |
| BsaJI | CCNNGG | 6 cut(s) | 111, 184, 387, 463, 569, 909 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 37, 78, 463, 515 |
| Bse118I | RCCGGY | 1 cut(s) | 508 |
| Bse1I | ACTGG | 1 cut(s) | 825 |
| Bse3DI | GCAATG | 3 cut(s) | 72, 196, 796 |
| BseBI | CCWGG | 3 cut(s) | 464, 516, 570 |
| BseDI | CCNNGG | 6 cut(s) | 111, 184, 387, 463, 569, 909 |
| BseGI | GGATG | 5 cut(s) | 169, 445, 579, 675, 945 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 37, 78, 463, 515 |
| BseMI | GCAATG | 3 cut(s) | 72, 196, 796 |
| BseNI | ACTGG | 1 cut(s) | 825 |
| BseRI | GAGGAG | 2 cut(s) | 274, 1031 |
| BshFI | GGCC | 1 cut(s) | 907 |
| BshNI | GGYRCC | 1 cut(s) | 511 |
| BsiSI | CCGG | 1 cut(s) | 509 |
| BslFI | GGGAC | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 37, 78, 463, 515 |
| BsmAI | GTCTC | 2 cut(s) | 517, 729 |
| BsmBI | CGTCTC | 1 cut(s) | 517 |
| BsmFI | GGGAC | 1 cut(s) | 92 |
| BsnI | GGCC | 1 cut(s) | 907 |
| Bsp1286I | GDGCHC | 1 cut(s) | 714 |
| Bsp143I | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| Bsp19I | CCATGG | 1 cut(s) | 387 |
| BspACI | CCGC | 3 cut(s) | 69, 306, 327 |
| BspANI | GGCC | 1 cut(s) | 907 |
| BspHI | TCATGA | 1 cut(s) | 766 |
| BspLI | GGNNCC | 2 cut(s) | 118, 513 |
| BspPI | GGATC | 1 cut(s) | 1040 |
| BspQI | GCTCTTC | 1 cut(s) | 77 |
| BspT107I | GGYRCC | 1 cut(s) | 511 |
| BsrDI | GCAATG | 3 cut(s) | 72, 196, 796 |
| BsrFI | RCCGGY | 1 cut(s) | 508 |
| BsrI | ACTGG | 1 cut(s) | 825 |
| BssAI | RCCGGY | 1 cut(s) | 508 |
| BssECI | CCNNGG | 6 cut(s) | 111, 184, 387, 463, 569, 909 |
| BssMI | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| BssT1I | CCWWGG | 4 cut(s) | 111, 184, 387, 909 |
| Bst2UI | CCWGG | 3 cut(s) | 464, 516, 570 |
| Bst4CI | ACNGT | 1 cut(s) | 652 |
| Bst6I | CTCTTC | 6 cut(s) | 77, 189, 251, 279, 393, 588 |
| BstBAI | YACGTR | 1 cut(s) | 979 |
| BstC8I | GCNNGC | 3 cut(s) | 156, 303, 510 |
| BstDSI | CCRYGG | 1 cut(s) | 387 |
| BstF5I | GGATG | 5 cut(s) | 169, 445, 579, 675, 945 |
| BstHHI | GCGC | 2 cut(s) | 7, 50 |
| BstKTI | GATC | 4 cut(s) | 135, 871, 973, 1035 |
| BstMAI | GTCTC | 2 cut(s) | 517, 729 |
| BstMBI | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 54, 74, 298, 324, 679 |
| BstNI | CCWGG | 3 cut(s) | 464, 516, 570 |
| BstNSI | RCATGY | 1 cut(s) | 305 |
| BstSCI | CCNGG | 3 cut(s) | 462, 514, 568 |
| BstSNI | TACGTA | 1 cut(s) | 979 |
| BstV2I | GAAGAC | 4 cut(s) | 399, 459, 854, 1031 |
| BstX2I | RGATCY | 1 cut(s) | 970 |
| BstYI | RGATCY | 1 cut(s) | 970 |
| BsuI | GTATCC | 1 cut(s) | 761 |
| BsuRI | GGCC | 1 cut(s) | 907 |
| BtgI | CCRYGG | 1 cut(s) | 387 |
| BtrI | CACGTC | 1 cut(s) | 1005 |
| BtsCI | GGATG | 5 cut(s) | 169, 445, 579, 675, 945 |
| BtsIMutI | CAGTG | 2 cut(s) | 648, 818 |
| Cac8I | GCNNGC | 3 cut(s) | 156, 303, 510 |
| CciI | TCATGA | 1 cut(s) | 766 |
| CfoI | GCGC | 2 cut(s) | 7, 50 |
| Cfr10I | RCCGGY | 1 cut(s) | 508 |
| Cfr13I | GGNCC | 2 cut(s) | 566, 906 |
| Csp6I | GTAC | 2 cut(s) | 166, 976 |
| CviAII | CATG | 3 cut(s) | 302, 388, 767 |
| CviQI | GTAC | 2 cut(s) | 166, 976 |
| DpnI | GATC | 4 cut(s) | 134, 870, 972, 1034 |
| DpnII | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| DraI | TTTAAA | 1 cut(s) | 504 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 564 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 564 |
| Eam1104I | CTCTTC | 6 cut(s) | 77, 189, 251, 279, 393, 588 |
| EarI | CTCTTC | 6 cut(s) | 77, 189, 251, 279, 393, 588 |
| Eco105I | TACGTA | 1 cut(s) | 979 |
| Eco130I | CCWWGG | 4 cut(s) | 111, 184, 387, 909 |
| Eco24I | GRGCYC | 1 cut(s) | 714 |
| Eco47I | GGWCC | 1 cut(s) | 566 |
| EcoRII | CCWGG | 3 cut(s) | 462, 514, 568 |
| EcoT14I | CCWWGG | 4 cut(s) | 111, 184, 387, 909 |
| EcoT38I | GRGCYC | 1 cut(s) | 714 |
| ErhI | CCWWGG | 4 cut(s) | 111, 184, 387, 909 |
| Esp3I | CGTCTC | 1 cut(s) | 517 |
| FaeI | CATG | 3 cut(s) | 305, 391, 770 |
| FaqI | GGGAC | 1 cut(s) | 92 |
| FatI | CATG | 3 cut(s) | 301, 387, 766 |
| FbaI | TGATCA | 1 cut(s) | 868 |
| Fnu4HI | GCNGC | 2 cut(s) | 69, 306 |
| FokI | GGATG | 5 cut(s) | 156, 452, 586, 682, 952 |
| FriOI | GRGCYC | 1 cut(s) | 714 |
| Fsp4HI | GCNGC | 2 cut(s) | 69, 306 |
| FspBI | CTAG | 1 cut(s) | 309 |
| GlaI | GCGC | 2 cut(s) | 6, 49 |
| GluI | GCNGC | 2 cut(s) | 69, 306 |
| GsuI | CTGGAG | 1 cut(s) | 753 |
| HaeIII | GGCC | 1 cut(s) | 907 |
| HapII | CCGG | 1 cut(s) | 509 |
| HhaI | GCGC | 2 cut(s) | 7, 50 |
| Hin1II | CATG | 3 cut(s) | 305, 391, 770 |
| Hin6I | GCGC | 2 cut(s) | 5, 48 |
| HinP1I | GCGC | 2 cut(s) | 5, 48 |
| HindIII | AAGCTT | 1 cut(s) | 20 |
| HinfI | GANTC | 1 cut(s) | 774 |
| HpaII | CCGG | 1 cut(s) | 509 |
| HphI | GGTGA | 2 cut(s) | 428, 719 |
| Hpy166II | GTNNAC | 2 cut(s) | 605, 880 |
| Hpy188I | TCNGA | 4 cut(s) | 12, 124, 247, 779 |
| Hpy188III | TCNNGA | 3 cut(s) | 136, 173, 767 |
| Hpy8I | GTNNAC | 2 cut(s) | 605, 880 |
| Hpy99I | CGWCG | 1 cut(s) | 128 |
| HpyAV | CCTTC | 3 cut(s) | 774, 779, 929 |
| HpyCH4III | ACNGT | 1 cut(s) | 652 |
| HpyCH4IV | ACGT | 4 cut(s) | 62, 526, 978, 1004 |
| HpyCH4V | TGCA | 4 cut(s) | 77, 443, 673, 949 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 54, 74, 298, 324, 679 |
| HpySE526I | ACGT | 4 cut(s) | 62, 526, 978, 1004 |
| Hsp92II | CATG | 3 cut(s) | 305, 391, 770 |
| HspAI | GCGC | 2 cut(s) | 5, 48 |
| KroI | GCCGGC | 1 cut(s) | 508 |
| KroNI | GCCGGC | 1 cut(s) | 510 |
| Ksp22I | TGATCA | 1 cut(s) | 868 |
| Kzo9I | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| LguI | GCTCTTC | 1 cut(s) | 77 |
| LmnI | GCTCC | 4 cut(s) | 116, 261, 389, 1018 |
| LweI | GCATC | 4 cut(s) | 16, 430, 660, 930 |
| MaeI | CTAG | 1 cut(s) | 309 |
| MaeII | ACGT | 4 cut(s) | 62, 526, 978, 1004 |
| MaeIII | GTNAC | 2 cut(s) | 979, 1005 |
| MalI | GATC | 4 cut(s) | 134, 870, 972, 1034 |
| MboI | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| MflI | RGATCY | 1 cut(s) | 970 |
| MhlI | GDGCHC | 1 cut(s) | 714 |
| MluCI | AATT | 7 cut(s) | 209, 434, 532, 717, 743, 897, 923 |
| MmeI | TCCRAC | 2 cut(s) | 147, 604 |
| MroNI | GCCGGC | 1 cut(s) | 508 |
| MseI | TTAA | 2 cut(s) | 503, 740 |
| MslI | CAYNNNNRTG | 1 cut(s) | 864 |
| MspI | CCGG | 1 cut(s) | 509 |
| MspR9I | CCNGG | 3 cut(s) | 464, 516, 570 |
| MvaI | CCWGG | 3 cut(s) | 464, 516, 570 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 54, 74, 298, 324, 679 |
| NaeI | GCCGGC | 1 cut(s) | 510 |
| NcoI | CCATGG | 1 cut(s) | 387 |
| NdeII | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| NgoMIV | GCCGGC | 1 cut(s) | 508 |
| NlaIII | CATG | 3 cut(s) | 305, 391, 770 |
| NlaIV | GGNNCC | 2 cut(s) | 118, 513 |
| NmuCI | GTSAC | 1 cut(s) | 1005 |
| NspI | RCATGY | 1 cut(s) | 305 |
| PaeI | GCATGC | 1 cut(s) | 305 |
| PagI | TCATGA | 1 cut(s) | 766 |
| PciSI | GCTCTTC | 1 cut(s) | 77 |
| PdiI | GCCGGC | 1 cut(s) | 510 |
| PfeI | GAWTC | 1 cut(s) | 774 |
| PkrI | GCNGC | 2 cut(s) | 70, 307 |
| Ppu21I | YACGTR | 1 cut(s) | 979 |
| Psp6I | CCWGG | 3 cut(s) | 462, 514, 568 |
| PspGI | CCWGG | 3 cut(s) | 462, 514, 568 |
| PspN4I | GGNNCC | 2 cut(s) | 118, 513 |
| PspPI | GGNCC | 2 cut(s) | 566, 906 |
| PsuI | RGATCY | 1 cut(s) | 970 |
| RsaI | GTAC | 2 cut(s) | 167, 977 |
| RsaNI | GTAC | 2 cut(s) | 166, 976 |
| RseI | CAYNNNNRTG | 1 cut(s) | 864 |
| SapI | GCTCTTC | 1 cut(s) | 77 |
| SaqAI | TTAA | 2 cut(s) | 503, 740 |
| SatI | GCNGC | 2 cut(s) | 69, 306 |
| Sau3AI | GATC | 4 cut(s) | 132, 868, 970, 1032 |
| Sau96I | GGNCC | 2 cut(s) | 566, 906 |
| ScrFI | CCNGG | 3 cut(s) | 464, 516, 570 |
| SduI | GDGCHC | 1 cut(s) | 714 |
| SfaNI | GCATC | 4 cut(s) | 16, 430, 660, 930 |
| SinI | GGWCC | 1 cut(s) | 566 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 864 |
| SmlI | CTYRAG | 1 cut(s) | 161 |
| SmoI | CTYRAG | 1 cut(s) | 161 |
| SnaBI | TACGTA | 1 cut(s) | 979 |
| SphI | GCATGC | 1 cut(s) | 305 |
| Sse9I | AATT | 7 cut(s) | 209, 434, 532, 717, 743, 897, 923 |
| SsiI | CCGC | 3 cut(s) | 69, 306, 327 |
| SspMI | CTAG | 1 cut(s) | 309 |
| StyD4I | CCNGG | 3 cut(s) | 462, 514, 568 |
| StyI | CCWWGG | 4 cut(s) | 111, 184, 387, 909 |
| TaaI | ACNGT | 1 cut(s) | 652 |
| TaiI | ACGT | 4 cut(s) | 65, 529, 981, 1007 |
| TaqII | GACCGA | 2 cut(s) | 554, 786 |
| TasI | AATT | 7 cut(s) | 209, 434, 532, 717, 743, 897, 923 |
| TauI | GCSGC | 2 cut(s) | 71, 308 |
| TfiI | GAWTC | 1 cut(s) | 774 |
| Tru1I | TTAA | 2 cut(s) | 503, 740 |
| Tru9I | TTAA | 2 cut(s) | 503, 740 |
| TscAI | CASTG | 2 cut(s) | 655, 825 |
| TseFI | GTSAC | 1 cut(s) | 1005 |
| Tsp45I | GTSAC | 1 cut(s) | 1005 |
| TspDTI | ATGAA | 5 cut(s) | 207, 359, 634, 642, 714 |
| TspGWI | ACGGA | 1 cut(s) | 737 |
| TspRI | CASTG | 2 cut(s) | 655, 825 |
| VpaK11BI | GGWCC | 1 cut(s) | 566 |
| XapI | RAATTY | 3 cut(s) | 209, 743, 923 |
| XceI | RCATGY | 1 cut(s) | 305 |
| XspI | CTAG | 1 cut(s) | 309 |