MD12G1103300.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
16259237 .. 16262196
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1103300.v1.1.491

Sequence Viewer

Length: 1281 bp
ATGTTTAGTTCTTCATTTTTTTCCACTATATATCCCTCGGAAACCTTCTCATTATTTCCATCTTCATTTCTTGTTGTTTATTCCCACTATATTTCCTTGTTCATTATCATTCTCCTTTTTGGAAAAGGACAGAGGTTAGGTTTTGGAATATTTCTCATGTCTCCAACGATGGCAGTGTTGACAACTACCGAGAATGGGGTAAGTGATCAGTACCAAAATGGCGTGAAGTGCTTGTATGAGAATGGTATAAACAAACTTCCAAACAAGTACATACTGCCCACTTTAGAACGACCTAACCGGAGTGATGACCAGGAACCAAAAGTATCCAACCAAAATCTGAAGCTGCCCATCATCGATTTCAAGGAACTGCAAGGTCCCAATAGACCCCAAGTCATTAAATCTCTGGCTAATGCTTGTGAACAATATGGCTTCTTTCAGTTGGTAAACCATGGCATTCCAAGTGATATTATAAGCAGTATGACCGACGTGAGCACTAGGTTTTTTGAGCTCCCTTTTGAGGAGAGAGCCAAGTACATGTCCTCAGATATGCGTGCGCCTGTCCGATATGGGACTAGCTTTAACCAGAACAAAGATAAGGTGTTTTATTGGAGGGATTTCTTGAAGCTAATGTGCCATCCCTTACCAGATGTCCTTTCTCACTGGCCTTCGTCACCGGTGGACATGAGGAAACTGGCGGCTACCTACGCAGAGGAAAACAAATACTTATTCCTAATGCTAATGGATGCCATTTTTGAGAGCTTACGAATTGTGGGAACCACAGAGAACACGACAGAAGAAGATGAAATGTTAAAGGACTTCAAAGATGGGAGCCAGCTAATGGTTGTCAATTGCTACCCGCCATGCCCCCAACCTGATCTAACCCTAGGGATGCCTCCCCACTCGGATTATGGGTTTCTCACAATTCTTCTCCAAGATGAAGTTGAAGGCCTTCAAATTAAAAAACAAGATAAATGGATCACCGTCGAACCAATCCCCAATTCTTTTGTGGTCAACGTTGGTGATCACCTTGAGATATTTAGCAATGGAAAATACAAGAGTGTTCTACATAGAGTGTTGGTGAATTCTTTAAAAGGTCGGATTTCTGTGGCCTCTTTGCATACTCTACCTTTCACGCGCTTGGTTGGACCGTCACCAAAACTTATCAACGAATCAAATCCAAGGCGGTACAAGGACACTAATTTTGCCAGCTTTCTGGAGTATATTTCATCTCGTGAGCCTAAATGGAAGAATTTCCTCGAGTCTAGGAAGTTATTGACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

427

Amino Acids

48.86

Weight (kDa)

6.72

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 115 - 222 2.2e-29 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 278 - 372 4.8e-36 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 470
AccB7I CCANNNNNTGG 1 cut(s) 838
AccII CGCG 1 cut(s) 1135
AciI CCGC 3 cut(s) 695, 857, 1183
AclI AACGTT 1 cut(s) 1014
AclWI GGATC 1 cut(s) 983
AcsI RAATTY 2 cut(s) 1081, 1249
AcuI CTGAAG 1 cut(s) 359
AfaI GTAC 4 cut(s) 212, 269, 533, 1187
AfiI CCNNNNNNNGG 3 cut(s) 195, 517, 838
AflIII ACRYGT 1 cut(s) 534
AgeI ACCGGT 1 cut(s) 673
AgsI TTSAA 5 cut(s) 361, 622, 820, 944, 953
AhdI GACNNNNNGTC 1 cut(s) 389
AjiI CACGTC 1 cut(s) 487
AjnI CCWGG 1 cut(s) 309
AjuI GAANNNNNNNTTGG 2 cut(s) 982, 1014
AluBI AGCT 7 cut(s) 343, 508, 576, 625, 759, 835, 1209
AluI AGCT 7 cut(s) 343, 508, 576, 625, 759, 835, 1209
Alw21I GWGCWC 2 cut(s) 494, 510
Alw26I GTCTC 1 cut(s) 165
AlwI GGATC 1 cut(s) 983
Ama87I CYCGRG 1 cut(s) 1256
AoxI GGCC 3 cut(s) 662, 946, 1107
ApeKI GCWGC 1 cut(s) 343
ApoI RAATTY 2 cut(s) 1081, 1249
ArsI GACNNNNNNTTYG 2 cut(s) 1184, 1216
AsiGI ACCGGT 1 cut(s) 673
Asp700I GAANNNNTTC 2 cut(s) 948, 1250
AspA2I CCTAGG 1 cut(s) 883
AspLEI GCGC 2 cut(s) 556, 1137
AspS9I GGNCC 2 cut(s) 374, 1145
AsuHPI GGTGA 6 cut(s) 663, 970, 1016, 1031, 1090, 1143
AvaI CYCGRG 1 cut(s) 1256
AvaII GGWCC 2 cut(s) 374, 1145
AvrII CCTAGG 1 cut(s) 883
BanII GRGCYC 1 cut(s) 510
BauI CACGAG 1 cut(s) 1230
Bbv12I GWGCWC 2 cut(s) 494, 510
BbvI GCAGC 1 cut(s) 330
BccI CCATC 5 cut(s) 67, 163, 356, 642, 818
BciT130I CCWGG 1 cut(s) 311
BciVI GTATCC 1 cut(s) 334
BclI TGATCA 2 cut(s) 205, 1021
BcoDI GTCTC 1 cut(s) 165
BfaI CTAG 5 cut(s) 495, 573, 884, 1263, 1279
BfuI GTATCC 1 cut(s) 334
BisI GCNGC 2 cut(s) 344, 696
BlnI CCTAGG 1 cut(s) 883
BlsI GCNGC 2 cut(s) 345, 697
Bme1390I CCNGG 1 cut(s) 311
Bme18I GGWCC 2 cut(s) 374, 1145
BmeRI GACNNNNNGTC 1 cut(s) 389
BmeT110I CYCGRG 1 cut(s) 1256
BmgBI CACGTC 1 cut(s) 487
BmgT120I GGNCC 2 cut(s) 374, 1145
BmiI GGNNCC 4 cut(s) 315, 376, 775, 830
BmrFI CCNGG 1 cut(s) 311
BmsI GCATC 2 cut(s) 733, 879
BpmI CTGGAG 1 cut(s) 1235
BpuEI CTTGAG 1 cut(s) 1049
Bsa29I ATCGAT 1 cut(s) 354
BsaJI CCNNGG 4 cut(s) 36, 448, 883, 1178
BsaWI WCCGGW 2 cut(s) 297, 673
Bsc4I CCNNNNNNNGG 3 cut(s) 195, 517, 838
Bse118I RCCGGY 1 cut(s) 673
Bse1I ACTGG 2 cut(s) 665, 696
Bse3DI GCAATG 1 cut(s) 1048
BseBI CCWGG 1 cut(s) 311
BseCI ATCGAT 1 cut(s) 354
BseDI CCNNGG 4 cut(s) 36, 448, 883, 1178
BseGI GGATG 3 cut(s) 634, 748, 894
BseLI CCNNNNNNNGG 3 cut(s) 195, 517, 838
BseMI GCAATG 1 cut(s) 1048
BseMII CTCAG 1 cut(s) 555
BseNI ACTGG 2 cut(s) 665, 696
BseRI GAGGAG 1 cut(s) 533
BseXI GCAGC 1 cut(s) 330
Bsh1236I CGCG 1 cut(s) 1135
BshFI GGCC 3 cut(s) 664, 948, 1109
BshTI ACCGGT 1 cut(s) 673
BshVI ATCGAT 1 cut(s) 354
BsiHKAI GWGCWC 2 cut(s) 494, 510
BsiHKCI CYCGRG 1 cut(s) 1256
BsiSI CCGG 2 cut(s) 298, 674
BslFI GGGAC 2 cut(s) 360, 583
BslI CCNNNNNNNGG 3 cut(s) 195, 517, 838
BsmAI GTCTC 1 cut(s) 165
BsmFI GGGAC 2 cut(s) 360, 583
BsmI GAATGC 1 cut(s) 453
BsnI GGCC 3 cut(s) 664, 948, 1109
BsoBI CYCGRG 1 cut(s) 1256
Bsp1286I GDGCHC 2 cut(s) 494, 510
Bsp143I GATC 4 cut(s) 205, 874, 975, 1021
Bsp19I CCATGG 1 cut(s) 448
BspACI CCGC 3 cut(s) 695, 857, 1183
BspANI GGCC 3 cut(s) 664, 948, 1109
BspCNI CTCAG 1 cut(s) 554
BspDI ATCGAT 1 cut(s) 354
BspFNI CGCG 1 cut(s) 1135
BspLI GGNNCC 4 cut(s) 315, 376, 775, 830
BspPI GGATC 1 cut(s) 983
BsrDI GCAATG 1 cut(s) 1048
BsrFI RCCGGY 1 cut(s) 673
BsrI ACTGG 2 cut(s) 665, 696
BssAI RCCGGY 1 cut(s) 673
BssECI CCNNGG 4 cut(s) 36, 448, 883, 1178
BssMI GATC 4 cut(s) 205, 874, 975, 1021
BssSI CACGAG 1 cut(s) 1230
BssT1I CCWWGG 3 cut(s) 448, 883, 1178
Bst2BI CACGAG 1 cut(s) 1230
Bst2UI CCWGG 1 cut(s) 311
Bst4CI ACNGT 2 cut(s) 982, 1149
BstC8I GCNNGC 3 cut(s) 552, 833, 1207
BstDEI CTNAG 1 cut(s) 541
BstDSI CCRYGG 1 cut(s) 448
BstF5I GGATG 3 cut(s) 634, 748, 894
BstFNI CGCG 1 cut(s) 1135
BstHHI GCGC 2 cut(s) 556, 1137
BstKTI GATC 4 cut(s) 208, 877, 978, 1024
BstMAI GTCTC 1 cut(s) 165
BstMBI GATC 4 cut(s) 205, 874, 975, 1021
BstMWI GCNNNNNNNGC 2 cut(s) 228, 704
BstNI CCWGG 1 cut(s) 311
BstNSI RCATGY 1 cut(s) 538
BstSCI CCNGG 1 cut(s) 309
BstUI CGCG 1 cut(s) 1135
BstV1I GCAGC 1 cut(s) 330
BstXI CCANNNNNNTGG 1 cut(s) 1213
Bsu15I ATCGAT 1 cut(s) 354
BsuI GTATCC 1 cut(s) 334
BsuRI GGCC 3 cut(s) 664, 948, 1109
BsuTUI ATCGAT 1 cut(s) 354
BtgI CCRYGG 1 cut(s) 448
BtrI CACGTC 1 cut(s) 487
BtsCI GGATG 3 cut(s) 634, 748, 894
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 2 cut(s) 180, 658
Cac8I GCNNGC 3 cut(s) 552, 833, 1207
CfoI GCGC 2 cut(s) 556, 1137
Cfr10I RCCGGY 1 cut(s) 673
Cfr13I GGNCC 2 cut(s) 374, 1145
ClaI ATCGAT 1 cut(s) 354
Csp6I GTAC 4 cut(s) 211, 268, 532, 1186
CspAI ACCGGT 1 cut(s) 673
CviAII CATG 5 cut(s) 157, 449, 535, 682, 861
CviQI GTAC 4 cut(s) 211, 268, 532, 1186
DdeI CTNAG 1 cut(s) 541
DpnI GATC 4 cut(s) 207, 876, 977, 1023
DpnII GATC 4 cut(s) 205, 874, 975, 1021
DraI TTTAAA 1 cut(s) 1089
DriI GACNNNNNGTC 1 cut(s) 389
Eam1105I GACNNNNNGTC 1 cut(s) 389
Ecl136II GAGCTC 1 cut(s) 508
Eco130I CCWWGG 3 cut(s) 448, 883, 1178
Eco147I AGGCCT 1 cut(s) 948
Eco24I GRGCYC 1 cut(s) 510
Eco47I GGWCC 2 cut(s) 374, 1145
Eco53kI GAGCTC 1 cut(s) 508
Eco57I CTGAAG 1 cut(s) 359
Eco88I CYCGRG 1 cut(s) 1256
EcoICRI GAGCTC 1 cut(s) 508
EcoO109I RGGNCCY 1 cut(s) 374
EcoRI GAATTC 1 cut(s) 1081
EcoRII CCWGG 1 cut(s) 309
EcoT14I CCWWGG 3 cut(s) 448, 883, 1178
EcoT38I GRGCYC 1 cut(s) 510
ErhI CCWWGG 3 cut(s) 448, 883, 1178
FaeI CATG 5 cut(s) 160, 452, 538, 685, 864
FaqI GGGAC 2 cut(s) 360, 583
FatI CATG 5 cut(s) 156, 448, 534, 681, 860
FauI CCCGC 1 cut(s) 864
FbaI TGATCA 2 cut(s) 205, 1021
Fnu4HI GCNGC 2 cut(s) 344, 696
FokI GGATG 3 cut(s) 621, 755, 901
FriOI GRGCYC 1 cut(s) 510
Fsp4HI GCNGC 2 cut(s) 344, 696
FspBI CTAG 5 cut(s) 495, 573, 884, 1263, 1279
GlaI GCGC 2 cut(s) 555, 1136
GluI GCNGC 2 cut(s) 344, 696
GsuI CTGGAG 1 cut(s) 1235
HaeIII GGCC 3 cut(s) 664, 948, 1109
HapII CCGG 2 cut(s) 298, 674
HhaI GCGC 2 cut(s) 556, 1137
Hin1II CATG 5 cut(s) 160, 452, 538, 685, 864
Hin6I GCGC 2 cut(s) 554, 1135
HinP1I GCGC 2 cut(s) 554, 1135
HincII GTYRAC 2 cut(s) 180, 1012
HindII GTYRAC 2 cut(s) 180, 1012
HinfI GANTC 2 cut(s) 1169, 1259
HpaII CCGG 2 cut(s) 298, 674
HphI GGTGA 6 cut(s) 663, 970, 1016, 1031, 1090, 1143
Hpy166II GTNNAC 5 cut(s) 180, 419, 445, 679, 1012
Hpy188I TCNGA 6 cut(s) 40, 339, 544, 563, 904, 1098
Hpy188III TCNNGA 3 cut(s) 619, 1214, 1232
Hpy8I GTNNAC 5 cut(s) 180, 419, 445, 679, 1012
Hpy99I CGWCG 2 cut(s) 488, 986
HpyAV CCTTC 4 cut(s) 55, 675, 938, 959
HpyCH4III ACNGT 2 cut(s) 982, 1149
HpyCH4IV ACGT 2 cut(s) 486, 1014
HpyCH4V TGCA 2 cut(s) 370, 1117
HpyF10VI GCNNNNNNNGC 2 cut(s) 228, 704
HpyF3I CTNAG 1 cut(s) 541
HpySE526I ACGT 2 cut(s) 486, 1014
Hsp92II CATG 5 cut(s) 160, 452, 538, 685, 864
HspAI GCGC 2 cut(s) 554, 1135
Ksp22I TGATCA 2 cut(s) 205, 1021
Kzo9I GATC 4 cut(s) 205, 874, 975, 1021
LmnI GCTCC 2 cut(s) 513, 828
Lsp1109I GCAGC 1 cut(s) 330
LweI GCATC 2 cut(s) 733, 879
MaeI CTAG 5 cut(s) 495, 573, 884, 1263, 1279
MaeII ACGT 2 cut(s) 486, 1014
MaeIII GTNAC 2 cut(s) 669, 1149
MalI GATC 4 cut(s) 207, 876, 977, 1023
MboI GATC 4 cut(s) 205, 874, 975, 1021
MboII GAAGA 6 cut(s) 3, 54, 806, 809, 917, 1258
MfeI CAATTG 1 cut(s) 847
MhlI GDGCHC 2 cut(s) 494, 510
MluCI AATT 8 cut(s) 765, 847, 921, 954, 997, 1081, 1198, 1249
MlyI GAGTC 1 cut(s) 1268
MmeI TCCRAC 4 cut(s) 188, 351, 1076, 1123
MroXI GAANNNNTTC 2 cut(s) 948, 1250
MseI TTAA 5 cut(s) 396, 579, 809, 957, 1088
MspI CCGG 2 cut(s) 298, 674
MspR9I CCNGG 1 cut(s) 311
MunI CAATTG 1 cut(s) 847
Mva1269I GAATGC 1 cut(s) 453
MvaI CCWGG 1 cut(s) 311
MvnI CGCG 1 cut(s) 1135
MwoI GCNNNNNNNGC 2 cut(s) 228, 704
NcoI CCATGG 1 cut(s) 448
NdeII GATC 4 cut(s) 205, 874, 975, 1021
NlaIII CATG 5 cut(s) 160, 452, 538, 685, 864
NlaIV GGNNCC 4 cut(s) 315, 376, 775, 830
NmuCI GTSAC 2 cut(s) 669, 1149
NspI RCATGY 1 cut(s) 538
PaeR7I CTCGAG 1 cut(s) 1256
PceI AGGCCT 1 cut(s) 948
PciI ACATGT 1 cut(s) 534
PctI GAATGC 1 cut(s) 453
PdmI GAANNNNTTC 2 cut(s) 948, 1250
PfeI GAWTC 1 cut(s) 1169
PflMI CCANNNNNTGG 1 cut(s) 838
PinAI ACCGGT 1 cut(s) 673
PkrI GCNGC 2 cut(s) 345, 697
PleI GAGTC 1 cut(s) 1267
PpsI GAGTC 1 cut(s) 1267
PpuMI RGGWCCY 1 cut(s) 374
PscI ACATGT 1 cut(s) 534
PsiI TTATAA 1 cut(s) 470
Psp124BI GAGCTC 1 cut(s) 510
Psp1406I AACGTT 1 cut(s) 1014
Psp5II RGGWCCY 1 cut(s) 374
Psp6I CCWGG 1 cut(s) 309
PspGI CCWGG 1 cut(s) 309
PspN4I GGNNCC 4 cut(s) 315, 376, 775, 830
PspPI GGNCC 2 cut(s) 374, 1145
PspPPI RGGWCCY 1 cut(s) 374
PspXI VCTCGAGB 1 cut(s) 1256
RsaI GTAC 4 cut(s) 212, 269, 533, 1187
RsaNI GTAC 4 cut(s) 211, 268, 532, 1186
SacI GAGCTC 1 cut(s) 510
SaqAI TTAA 5 cut(s) 396, 579, 809, 957, 1088
SatI GCNGC 2 cut(s) 344, 696
Sau3AI GATC 4 cut(s) 205, 874, 975, 1021
Sau96I GGNCC 2 cut(s) 374, 1145
SchI GAGTC 1 cut(s) 1268
ScrFI CCNGG 1 cut(s) 311
SduI GDGCHC 2 cut(s) 494, 510
SfaNI GCATC 2 cut(s) 733, 879
Sfr274I CTCGAG 1 cut(s) 1256
SgrAI CRCCGGYG 1 cut(s) 673
SinI GGWCC 2 cut(s) 374, 1145
SlaI CTCGAG 1 cut(s) 1256
SmlI CTYRAG 2 cut(s) 1028, 1256
SmoI CTYRAG 2 cut(s) 1028, 1256
Sse9I AATT 8 cut(s) 765, 847, 921, 954, 997, 1081, 1198, 1249
SseBI AGGCCT 1 cut(s) 948
SsiI CCGC 3 cut(s) 695, 857, 1183
SspI AATATT 1 cut(s) 150
SspMI CTAG 5 cut(s) 495, 573, 884, 1263, 1279
SstI GAGCTC 1 cut(s) 510
StuI AGGCCT 1 cut(s) 948
StyD4I CCNGG 1 cut(s) 309
StyI CCWWGG 3 cut(s) 448, 883, 1178
TaaI ACNGT 2 cut(s) 982, 1149
TaiI ACGT 2 cut(s) 489, 1017
TaqI TCGA 3 cut(s) 354, 984, 1257
TaqII GACCGA 1 cut(s) 497
TasI AATT 8 cut(s) 765, 847, 921, 954, 997, 1081, 1198, 1249
TatI WGTACW 2 cut(s) 267, 531
TauI GCSGC 1 cut(s) 698
TfiI GAWTC 1 cut(s) 1169
Tru1I TTAA 5 cut(s) 396, 579, 809, 957, 1088
Tru9I TTAA 5 cut(s) 396, 579, 809, 957, 1088
TscAI CASTG 2 cut(s) 180, 665
TseFI GTSAC 2 cut(s) 669, 1149
TseI GCWGC 1 cut(s) 343
Tsp45I GTSAC 2 cut(s) 669, 1149
TspDTI ATGAA 5 cut(s) 54, 91, 816, 951, 1215
TspRI CASTG 2 cut(s) 180, 665
Van91I CCANNNNNTGG 1 cut(s) 838
VpaK11BI GGWCC 2 cut(s) 374, 1145
XapI RAATTY 2 cut(s) 1081, 1249
XceI RCATGY 1 cut(s) 538
XcmI CCANNNNNNNNNTGG 2 cut(s) 905, 1003
XhoI CTCGAG 1 cut(s) 1256
XmaJI CCTAGG 1 cut(s) 883
XmnI GAANNNNTTC 2 cut(s) 948, 1250
XspI CTAG 5 cut(s) 495, 573, 884, 1263, 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.