pycom12g10180

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
12156027 .. 12158453
2427 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g10180.4

Sequence Viewer

Length: 1182 bp
ATGATTTTCCTTAATGGTGCTTCTTTAATTTCCAGGTTAGGTTTTGGAATATATCTCATGTCTCCAACGATGACAGTGTTGACAACTACCGAGAATGGGGAAAGTGATCAGTACCAAAATGGCGTGAAGCGCTTGAATGAGATTGGTATAAACAAACTTCCAAACAAGTACATACTGCCCACTTTAGAACGACCTAACCGGAGTGATGACCAGGAACCAAACGTATCCAACCAAAATCTGAAGCTGCCCATCATCGATTTCAAGGAACTGCAAGGTCCCAATAGACCCCAAGTCATTAAATCTCTGGCTAATGCCTGTGAACAATATGGCTTCTTTCAGTTGGTAAACCATGGCATTCCAAGTGATATTACAAGCAGTATGACCGACGTGAGCACTAGGTTTTTTGAGCTCCCTTTCGAGGAGAGAGCCAAGTACATGTCCTCAGATATGCGTGCGCCAGTCCGATATGGGACTAGCTTTAACCAGAACAAAGATAAGGTGTTTTATTGGAGGGATTTCTTGAAGCTAATGTGCCATCCTTTACCAGATGTCCTTTCTCACTGGCCTTCGTCACCGGTGGACATGAGGAAACTGACGGCTACCTACGCAGAGGAAAACAAATACTTATTCCTAATGCTAATGGATGCCATCTTTGAGAGCTTACGAATTGTGGGAACCACAGAGAACACGACAGAAGAAGATGAAATGTTAAAGGACTTCAAAGATGGGAGCCAGCTAATGGTTGTCAATTGCTACCCGCCATGCCCCCAACCTGATCTAACCCTAGGGATGCCTCCCCACTCGGATTATGGGTTTCTTACAATTCTTCTCCAAGATGAAGTTGAAGGCCTTCAAATTAAAAAACAAGATAAATGGATCACCGTCGAACCAATCCCCAATTCTTTTGTGGTCAACGTTGGTGATCACCTTGAGATATTTAGCAATGGAAAATACAAGAGTGCTCTACATAGAGTGTTGGTGAATTCTTTAAAAGGTCGGATTTCTGTGGCCTCTTTGCATACTCTACCTTTCACGCGCTCGGTTGGACCGTCGCCAAAACTTATCAACGAATCAAATCCAAGGCGGTACAAGGACACTAATTTTGCCAGCTTTCTGGAGTATATTTCATCTCGTGAGCCTAAATGGAAGAATTTCCTCGAGTCTAGGAAGTTATTAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

394

Amino Acids

45.0

Weight (kDa)

6.42

Isoelectric Point (pI)

42.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 739
AccII CGCG 1 cut(s) 1036
AciI CCGC 2 cut(s) 758, 1084
AclI AACGTT 1 cut(s) 915
AclWI GGATC 1 cut(s) 884
AcsI RAATTY 2 cut(s) 982, 1150
AcuI CTGAAG 1 cut(s) 260
AfaI GTAC 4 cut(s) 113, 170, 434, 1088
AfeI AGCGCT 1 cut(s) 131
AfiI CCNNNNNNNGG 3 cut(s) 96, 418, 739
AflIII ACRYGT 1 cut(s) 435
AgeI ACCGGT 1 cut(s) 574
AgsI TTSAA 6 cut(s) 136, 262, 523, 721, 845, 854
AhdI GACNNNNNGTC 1 cut(s) 290
AjiI CACGTC 1 cut(s) 388
AjnI CCWGG 2 cut(s) 32, 210
AjuI GAANNNNNNNTTGG 2 cut(s) 883, 915
AluBI AGCT 7 cut(s) 244, 409, 477, 526, 660, 736, 1110
AluI AGCT 7 cut(s) 244, 409, 477, 526, 660, 736, 1110
Alw21I GWGCWC 3 cut(s) 395, 411, 964
Alw26I GTCTC 1 cut(s) 66
AlwI GGATC 1 cut(s) 884
Ama87I CYCGRG 1 cut(s) 1157
Aor51HI AGCGCT 1 cut(s) 131
AoxI GGCC 3 cut(s) 563, 847, 1008
ApeKI GCWGC 1 cut(s) 244
ApoI RAATTY 2 cut(s) 982, 1150
ArsI GACNNNNNNTTYG 2 cut(s) 1085, 1117
AsiGI ACCGGT 1 cut(s) 574
Asp700I GAANNNNTTC 2 cut(s) 849, 1151
AspA2I CCTAGG 1 cut(s) 784
AspLEI GCGC 3 cut(s) 132, 457, 1038
AspS9I GGNCC 2 cut(s) 275, 1046
AsuHPI GGTGA 5 cut(s) 564, 871, 917, 932, 991
AvaI CYCGRG 1 cut(s) 1157
AvaII GGWCC 2 cut(s) 275, 1046
AvrII CCTAGG 1 cut(s) 784
BanII GRGCYC 1 cut(s) 411
BauI CACGAG 1 cut(s) 1131
Bbv12I GWGCWC 3 cut(s) 395, 411, 964
BbvI GCAGC 1 cut(s) 231
BccI CCATC 4 cut(s) 257, 543, 656, 719
BceAI ACGGC 1 cut(s) 612
BciT130I CCWGG 2 cut(s) 34, 212
BciVI GTATCC 1 cut(s) 235
BclI TGATCA 2 cut(s) 106, 922
BcoDI GTCTC 1 cut(s) 66
BfaI CTAG 4 cut(s) 396, 474, 785, 1164
BfoI RGCGCY 1 cut(s) 133
BfuI GTATCC 1 cut(s) 235
BisI GCNGC 1 cut(s) 245
BlnI CCTAGG 1 cut(s) 784
BlsI GCNGC 1 cut(s) 246
Bme1390I CCNGG 2 cut(s) 34, 212
Bme18I GGWCC 2 cut(s) 275, 1046
BmeRI GACNNNNNGTC 1 cut(s) 290
BmeT110I CYCGRG 1 cut(s) 1157
BmgBI CACGTC 1 cut(s) 388
BmgT120I GGNCC 2 cut(s) 275, 1046
BmiI GGNNCC 4 cut(s) 216, 277, 676, 731
BmrFI CCNGG 2 cut(s) 34, 212
BmsI GCATC 2 cut(s) 634, 780
BpmI CTGGAG 1 cut(s) 1136
BpuEI CTTGAG 1 cut(s) 950
Bsa29I ATCGAT 1 cut(s) 255
BsaJI CCNNGG 3 cut(s) 349, 784, 1079
BsaWI WCCGGW 2 cut(s) 198, 574
Bsc4I CCNNNNNNNGG 3 cut(s) 96, 418, 739
Bse118I RCCGGY 1 cut(s) 574
Bse1I ACTGG 2 cut(s) 458, 566
Bse3DI GCAATG 1 cut(s) 949
BseBI CCWGG 2 cut(s) 34, 212
BseCI ATCGAT 1 cut(s) 255
BseDI CCNNGG 3 cut(s) 349, 784, 1079
BseGI GGATG 3 cut(s) 535, 649, 795
BseLI CCNNNNNNNGG 3 cut(s) 96, 418, 739
BseMI GCAATG 1 cut(s) 949
BseMII CTCAG 1 cut(s) 456
BseNI ACTGG 2 cut(s) 458, 566
BseRI GAGGAG 1 cut(s) 434
BseXI GCAGC 1 cut(s) 231
Bsh1236I CGCG 1 cut(s) 1036
BshFI GGCC 3 cut(s) 565, 849, 1010
BshTI ACCGGT 1 cut(s) 574
BshVI ATCGAT 1 cut(s) 255
BsiHKAI GWGCWC 3 cut(s) 395, 411, 964
BsiHKCI CYCGRG 1 cut(s) 1157
BsiSI CCGG 2 cut(s) 199, 575
BslFI GGGAC 2 cut(s) 261, 484
BslI CCNNNNNNNGG 3 cut(s) 96, 418, 739
BsmAI GTCTC 1 cut(s) 66
BsmFI GGGAC 2 cut(s) 261, 484
BsmI GAATGC 1 cut(s) 354
BsnI GGCC 3 cut(s) 565, 849, 1010
BsoBI CYCGRG 1 cut(s) 1157
Bsp1286I GDGCHC 3 cut(s) 395, 411, 964
Bsp143I GATC 4 cut(s) 106, 775, 876, 922
Bsp19I CCATGG 1 cut(s) 349
BspACI CCGC 2 cut(s) 758, 1084
BspANI GGCC 3 cut(s) 565, 849, 1010
BspCNI CTCAG 1 cut(s) 455
BspDI ATCGAT 1 cut(s) 255
BspFNI CGCG 1 cut(s) 1036
BspLI GGNNCC 4 cut(s) 216, 277, 676, 731
BspPI GGATC 1 cut(s) 884
BsrDI GCAATG 1 cut(s) 949
BsrFI RCCGGY 1 cut(s) 574
BsrI ACTGG 2 cut(s) 458, 566
BssAI RCCGGY 1 cut(s) 574
BssECI CCNNGG 3 cut(s) 349, 784, 1079
BssMI GATC 4 cut(s) 106, 775, 876, 922
BssSI CACGAG 1 cut(s) 1131
BssT1I CCWWGG 3 cut(s) 349, 784, 1079
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 2 cut(s) 34, 212
Bst4CI ACNGT 3 cut(s) 76, 883, 1050
BstC8I GCNNGC 3 cut(s) 453, 734, 1108
BstDEI CTNAG 1 cut(s) 442
BstDSI CCRYGG 1 cut(s) 349
BstF5I GGATG 3 cut(s) 535, 649, 795
BstFNI CGCG 1 cut(s) 1036
BstH2I RGCGCY 1 cut(s) 133
BstHHI GCGC 3 cut(s) 132, 457, 1038
BstKTI GATC 4 cut(s) 109, 778, 879, 925
BstMAI GTCTC 1 cut(s) 66
BstMBI GATC 4 cut(s) 106, 775, 876, 922
BstMWI GCNNNNNNNGC 2 cut(s) 129, 605
BstNI CCWGG 2 cut(s) 34, 212
BstNSI RCATGY 1 cut(s) 439
BstSCI CCNGG 2 cut(s) 32, 210
BstUI CGCG 1 cut(s) 1036
BstV1I GCAGC 1 cut(s) 231
BstXI CCANNNNNNTGG 1 cut(s) 1114
Bsu15I ATCGAT 1 cut(s) 255
BsuI GTATCC 1 cut(s) 235
BsuRI GGCC 3 cut(s) 565, 849, 1010
BsuTUI ATCGAT 1 cut(s) 255
BtgI CCRYGG 1 cut(s) 349
BtrI CACGTC 1 cut(s) 388
BtsCI GGATG 3 cut(s) 535, 649, 795
BtsIMutI CAGTG 2 cut(s) 81, 559
Cac8I GCNNGC 3 cut(s) 453, 734, 1108
CfoI GCGC 3 cut(s) 132, 457, 1038
Cfr10I RCCGGY 1 cut(s) 574
Cfr13I GGNCC 2 cut(s) 275, 1046
ClaI ATCGAT 1 cut(s) 255
Csp6I GTAC 4 cut(s) 112, 169, 433, 1087
CspAI ACCGGT 1 cut(s) 574
CviAII CATG 5 cut(s) 58, 350, 436, 583, 762
CviQI GTAC 4 cut(s) 112, 169, 433, 1087
DdeI CTNAG 1 cut(s) 442
DpnI GATC 4 cut(s) 108, 777, 878, 924
DpnII GATC 4 cut(s) 106, 775, 876, 922
DraI TTTAAA 1 cut(s) 990
DriI GACNNNNNGTC 1 cut(s) 290
Eam1105I GACNNNNNGTC 1 cut(s) 290
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 3 cut(s) 349, 784, 1079
Eco147I AGGCCT 1 cut(s) 849
Eco24I GRGCYC 1 cut(s) 411
Eco47I GGWCC 2 cut(s) 275, 1046
Eco47III AGCGCT 1 cut(s) 131
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 1 cut(s) 260
Eco88I CYCGRG 1 cut(s) 1157
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 1 cut(s) 275
EcoRI GAATTC 1 cut(s) 982
EcoRII CCWGG 2 cut(s) 32, 210
EcoT14I CCWWGG 3 cut(s) 349, 784, 1079
EcoT38I GRGCYC 1 cut(s) 411
ErhI CCWWGG 3 cut(s) 349, 784, 1079
FaeI CATG 5 cut(s) 61, 353, 439, 586, 765
FaqI GGGAC 2 cut(s) 261, 484
FatI CATG 5 cut(s) 57, 349, 435, 582, 761
FauI CCCGC 1 cut(s) 765
FbaI TGATCA 2 cut(s) 106, 922
Fnu4HI GCNGC 1 cut(s) 245
FokI GGATG 3 cut(s) 522, 656, 802
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 1 cut(s) 245
FspBI CTAG 4 cut(s) 396, 474, 785, 1164
GlaI GCGC 3 cut(s) 131, 456, 1037
GluI GCNGC 1 cut(s) 245
GsuI CTGGAG 1 cut(s) 1136
HaeII RGCGCY 1 cut(s) 133
HaeIII GGCC 3 cut(s) 565, 849, 1010
HapII CCGG 2 cut(s) 199, 575
HhaI GCGC 3 cut(s) 132, 457, 1038
Hin1II CATG 5 cut(s) 61, 353, 439, 586, 765
Hin6I GCGC 3 cut(s) 130, 455, 1036
HinP1I GCGC 3 cut(s) 130, 455, 1036
HincII GTYRAC 2 cut(s) 81, 913
HindII GTYRAC 2 cut(s) 81, 913
HinfI GANTC 2 cut(s) 1070, 1160
HpaII CCGG 2 cut(s) 199, 575
HphI GGTGA 5 cut(s) 564, 871, 917, 932, 991
Hpy166II GTNNAC 5 cut(s) 81, 320, 346, 580, 913
Hpy188I TCNGA 5 cut(s) 240, 445, 464, 805, 999
Hpy188III TCNNGA 3 cut(s) 520, 1115, 1133
Hpy8I GTNNAC 5 cut(s) 81, 320, 346, 580, 913
Hpy99I CGWCG 3 cut(s) 389, 887, 1054
HpyAV CCTTC 3 cut(s) 576, 839, 860
HpyCH4III ACNGT 3 cut(s) 76, 883, 1050
HpyCH4IV ACGT 3 cut(s) 222, 387, 915
HpyCH4V TGCA 2 cut(s) 271, 1018
HpyF10VI GCNNNNNNNGC 2 cut(s) 129, 605
HpyF3I CTNAG 1 cut(s) 442
HpySE526I ACGT 3 cut(s) 222, 387, 915
Hsp92II CATG 5 cut(s) 61, 353, 439, 586, 765
HspAI GCGC 3 cut(s) 130, 455, 1036
Ksp22I TGATCA 2 cut(s) 106, 922
Kzo9I GATC 4 cut(s) 106, 775, 876, 922
LmnI GCTCC 2 cut(s) 414, 729
Lsp1109I GCAGC 1 cut(s) 231
LweI GCATC 2 cut(s) 634, 780
MaeI CTAG 4 cut(s) 396, 474, 785, 1164
MaeII ACGT 3 cut(s) 222, 387, 915
MaeIII GTNAC 1 cut(s) 570
MalI GATC 4 cut(s) 108, 777, 878, 924
MboI GATC 4 cut(s) 106, 775, 876, 922
MboII GAAGA 4 cut(s) 707, 710, 818, 1159
MfeI CAATTG 1 cut(s) 748
MhlI GDGCHC 3 cut(s) 395, 411, 964
MluCI AATT 9 cut(s) 27, 666, 748, 822, 855, 898, 982, 1099, 1150
MlyI GAGTC 1 cut(s) 1169
MmeI TCCRAC 4 cut(s) 89, 252, 977, 1024
MnlI CCTC 8 cut(s) 412, 451, 504, 579, 604, 804, 1021, 1166
MroXI GAANNNNTTC 2 cut(s) 849, 1151
MseI TTAA 8 cut(s) 12, 26, 297, 480, 710, 858, 989, 1175
MspI CCGG 2 cut(s) 199, 575
MspR9I CCNGG 2 cut(s) 34, 212
MunI CAATTG 1 cut(s) 748
Mva1269I GAATGC 1 cut(s) 354
MvaI CCWGG 2 cut(s) 34, 212
MvnI CGCG 1 cut(s) 1036
MwoI GCNNNNNNNGC 2 cut(s) 129, 605
NcoI CCATGG 1 cut(s) 349
NdeII GATC 4 cut(s) 106, 775, 876, 922
NlaIII CATG 5 cut(s) 61, 353, 439, 586, 765
NlaIV GGNNCC 4 cut(s) 216, 277, 676, 731
NmuCI GTSAC 1 cut(s) 570
NspI RCATGY 1 cut(s) 439
PaeR7I CTCGAG 1 cut(s) 1157
PceI AGGCCT 1 cut(s) 849
PciI ACATGT 1 cut(s) 435
PcsI WCGNNNNNNNCGW 1 cut(s) 1046
PctI GAATGC 1 cut(s) 354
PdmI GAANNNNTTC 2 cut(s) 849, 1151
PfeI GAWTC 1 cut(s) 1070
PflMI CCANNNNNTGG 1 cut(s) 739
PinAI ACCGGT 1 cut(s) 574
PkrI GCNGC 1 cut(s) 246
PleI GAGTC 1 cut(s) 1168
PpsI GAGTC 1 cut(s) 1168
PpuMI RGGWCCY 1 cut(s) 275
PscI ACATGT 1 cut(s) 435
Psp124BI GAGCTC 1 cut(s) 411
Psp1406I AACGTT 1 cut(s) 915
Psp5II RGGWCCY 1 cut(s) 275
Psp6I CCWGG 2 cut(s) 32, 210
PspGI CCWGG 2 cut(s) 32, 210
PspN4I GGNNCC 4 cut(s) 216, 277, 676, 731
PspPI GGNCC 2 cut(s) 275, 1046
PspPPI RGGWCCY 1 cut(s) 275
PspXI VCTCGAGB 1 cut(s) 1157
RsaI GTAC 4 cut(s) 113, 170, 434, 1088
RsaNI GTAC 4 cut(s) 112, 169, 433, 1087
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 8 cut(s) 12, 26, 297, 480, 710, 858, 989, 1175
SatI GCNGC 1 cut(s) 245
Sau3AI GATC 4 cut(s) 106, 775, 876, 922
Sau96I GGNCC 2 cut(s) 275, 1046
SchI GAGTC 1 cut(s) 1169
ScrFI CCNGG 2 cut(s) 34, 212
SduI GDGCHC 3 cut(s) 395, 411, 964
SfaNI GCATC 2 cut(s) 634, 780
Sfr274I CTCGAG 1 cut(s) 1157
SgrAI CRCCGGYG 1 cut(s) 574
SinI GGWCC 2 cut(s) 275, 1046
SlaI CTCGAG 1 cut(s) 1157
SmlI CTYRAG 2 cut(s) 929, 1157
SmoI CTYRAG 2 cut(s) 929, 1157
Sse9I AATT 9 cut(s) 27, 666, 748, 822, 855, 898, 982, 1099, 1150
SseBI AGGCCT 1 cut(s) 849
SsiI CCGC 2 cut(s) 758, 1084
SspMI CTAG 4 cut(s) 396, 474, 785, 1164
SstI GAGCTC 1 cut(s) 411
StuI AGGCCT 1 cut(s) 849
StyD4I CCNGG 2 cut(s) 32, 210
StyI CCWWGG 3 cut(s) 349, 784, 1079
TaaI ACNGT 3 cut(s) 76, 883, 1050
TaiI ACGT 3 cut(s) 225, 390, 918
TaqI TCGA 4 cut(s) 255, 417, 885, 1158
TaqII GACCGA 1 cut(s) 398
TasI AATT 9 cut(s) 27, 666, 748, 822, 855, 898, 982, 1099, 1150
TatI WGTACW 2 cut(s) 168, 432
TfiI GAWTC 1 cut(s) 1070
Tru1I TTAA 8 cut(s) 12, 26, 297, 480, 710, 858, 989, 1175
Tru9I TTAA 8 cut(s) 12, 26, 297, 480, 710, 858, 989, 1175
TscAI CASTG 2 cut(s) 81, 566
TseFI GTSAC 1 cut(s) 570
TseI GCWGC 1 cut(s) 244
Tsp45I GTSAC 1 cut(s) 570
TspDTI ATGAA 3 cut(s) 717, 852, 1116
TspRI CASTG 2 cut(s) 81, 566
Van91I CCANNNNNTGG 1 cut(s) 739
VpaK11BI GGWCC 2 cut(s) 275, 1046
XapI RAATTY 2 cut(s) 982, 1150
XceI RCATGY 1 cut(s) 439
XcmI CCANNNNNNNNNTGG 2 cut(s) 806, 904
XhoI CTCGAG 1 cut(s) 1157
XmaJI CCTAGG 1 cut(s) 784
XmnI GAANNNNTTC 2 cut(s) 849, 1151
XspI CTAG 4 cut(s) 396, 474, 785, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.