Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003921

Physical Location & Seq

Genomic Coordinates Forward (+)

14575913 .. 14578701

Gene Structure 2789 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G123400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGTCTCCAACAATGGCAGTGCTGACAACTGAGAATGGGGAAAGTCAGTACCAGAATGGAGTGAAGCGGTTGTACGAGAGTGGAATAAGCAAAGTTCCAAGCAAGTACGTATTGCCCATTTTGGATCGACCCAATTCAAGTGACCAGAAACCAAATGTGTCCAACCAAAATCTCAAGCTCCCCGTCATTGATTTCAAGGAATTGCAGGGTCCAAATAGAGCCCAAGTCCTCAAGTCCCTGGCTAATGCTTGTGAGCAATATGGCTTCTTTCAGTTGGTAAACCATGGCATTCCAAGTGATGTTATAAGCAGCATGATCGACGTGAGCACAAGGTTCTTCGAACTCCCTTTTGAGGAGAGGGCCAAGTACATGTCCTCGGATATGCATGCTCCTGTTCGATACGGAACTAGCTTTAACCAGAAAAAAGATAAGGTGTTTTGCTGGAGAGACTTCTTGAAGCTAATGTGCCATCCTTTACCAGATGTCCTTCCTCATTGGCCTTCTTCACCGGTGGATATGAGGAAATTGGCGGCTACCTACGCACAAGAAACCAAATACTTATTCCTAATGCTAATGGAAGCCATCTTCGAGAGCTTACGACTGGTGGGAACCACAGAGAACAACACGACAGAAGAAGATGAGATGTTAAAAGAATTCCAAGATGGAAGCCAGCTAATGGTTGTCAATTGCTACCCGCCATGCCCCCAACCGGATCTAACCCTAGGGATGCCTCCCCACTCTGATTATGGCTTTCTCACACTTCTTCTCCAAGATGAAGTTGAAGGACTTCAAATCCAAAAACAAGATCAATGGGTCACCGTTGAACCAATCCCCAATTCTTTTGTGGTCAACGTTGGTGATCACCTTGAGATATTTAGCAATGGAAAATACAAGAGTGTTCTACATAGAGTCTTGGTGAATTCTACAAAAGGTCGAATTTCAGTGGCCTCTTTGCATACTCTACCTTTCATGCGATCAGTTGGACCGTCGCCGAAACTTGTCAATGAATCAAATCCAAGGCTTTACAAGGACACTGATTTTGCCAGCTTCTTAGAGTATATTTCATCTCGTGAGCCTAAGAGGAAGAATTTCCTTGAGTCTAGGAAATTATTTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

373

Amino Acids

42.43

Weight (kDa)

6.27

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003921)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36690 AT2G36690
fragaria_vesca	FvH4_6g17160 FvH4_7g06780 FvH4_7g06780
malus_domestica	MD07G1074700.v1.1 MD12G1103300.v1.1
prunus_persica	Prupe.2G095000_v2.0.a1 Prupe.7G123400_v2.0.a1 Prupe.7G123400_v2.0.a1
pyrus_communis	pycom07g05870 pycom12g10180
rosa_chinensis	RchiOBHm_Chr1g0336381 RchiOBHm_Chr3g0471251
rosa_laevigata	RLG00000024194 RLG00000029370
rosa_multiflora	Rmu_sc0000393.1_g000004 Rmu_sc0000393.1_g000005 Rmu_sc0004870.1_g000002 Rmu_sc0005261.1_g000001
rosa_roxburghii	Rroxscaffold_4G00315710 Rroxscaffold_6G00410170
rosa_rugosa	Rorug01G0125400 Rorug03G0116300
rosa_samantha	Rh1AG144600 Rh1BG114200 Rh1CG136100 Rh1DG151300 Rh3AG165700 Rh3BG191100 Rh3CG181400 Rh3DG184600
rosa_wichuraiana	Rw1G011860 Rw3G015600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	305
AccB7I	CCANNNNNTGG	1 cut(s)	676
AciI	CCGC	3 cut(s)	67, 530, 695
AclI	AACGTT	1 cut(s)	852
AclWI	GGATC	2 cut(s)	132, 720
AcsI	RAATTY	4 cut(s)	653, 919, 936, 1087
AfaI	GTAC	4 cut(s)	50, 74, 107, 368
AfiI	CCNNNNNNNGG	3 cut(s)	352, 676, 709
AflIII	ACRYGT	1 cut(s)	369
AgeI	ACCGGT	1 cut(s)	508
AgsI	TTSAA	6 cut(s)	138, 196, 457, 782, 791, 824
AjiI	CACGTC	1 cut(s)	322
AjnI	CCWGG	1 cut(s)	237
AjuI	GAANNNNNNNTTGG	4 cut(s)	545, 577, 820, 852
AluBI	AGCT	6 cut(s)	178, 411, 460, 594, 673, 1047
AluI	AGCT	6 cut(s)	178, 411, 460, 594, 673, 1047
Alw21I	GWGCWC	1 cut(s)	329
Alw26I	GTCTC	2 cut(s)	9, 441
AlwI	GGATC	2 cut(s)	132, 720
AoxI	GGCC	3 cut(s)	360, 497, 945
ApeKI	GCWGC	1 cut(s)	309
ApoI	RAATTY	4 cut(s)	653, 919, 936, 1087
ArsI	GACNNNNNNTTYG	2 cut(s)	1022, 1054
AsiGI	ACCGGT	1 cut(s)	508
Asp700I	GAANNNNTTC	2 cut(s)	786, 1088
AspA2I	CCTAGG	1 cut(s)	721
AspS9I	GGNCC	3 cut(s)	209, 360, 983
AsuHPI	GGTGA	5 cut(s)	498, 808, 854, 869, 928
AsuII	TTCGAA	1 cut(s)	339
AvaII	GGWCC	2 cut(s)	209, 983
AvrII	CCTAGG	1 cut(s)	721
BanII	GRGCYC	1 cut(s)	223
BarI	GAAGNNNNNNTAC	2 cut(s)	56, 88
BauI	CACGAG	1 cut(s)	1068
Bbv12I	GWGCWC	1 cut(s)	329
BbvI	GCAGC	1 cut(s)	321
BccI	CCATC	3 cut(s)	477, 590, 656
BcgI	CGANNNNNNTGC	2 cut(s)	298, 332
BciT130I	CCWGG	1 cut(s)	239
BclI	TGATCA	1 cut(s)	859
BcoDI	GTCTC	2 cut(s)	9, 441
BfaI	CTAG	3 cut(s)	408, 722, 1101
BisI	GCNGC	2 cut(s)	310, 531
BlnI	CCTAGG	1 cut(s)	721
BlsI	GCNGC	2 cut(s)	311, 532
Bme1390I	CCNGG	1 cut(s)	239
Bme18I	GGWCC	2 cut(s)	209, 983
BmgBI	CACGTC	1 cut(s)	322
BmgT120I	GGNCC	3 cut(s)	209, 360, 983
BmiI	GGNNCC	2 cut(s)	210, 610
BmrFI	CCNGG	1 cut(s)	239
BmsI	GCATC	1 cut(s)	717
BpmI	CTGGAG	1 cut(s)	463
Bpu14I	TTCGAA	1 cut(s)	339
BpuEI	CTTGAG	4 cut(s)	158, 215, 887, 1115
BsaAI	YACGTR	1 cut(s)	109
BsaJI	CCNNGG	5 cut(s)	237, 283, 375, 721, 1016
BsaWI	WCCGGW	2 cut(s)	508, 709
BsaXI	ACNNNNNCTCC	2 cut(s)	750, 780
Bsc4I	CCNNNNNNNGG	3 cut(s)	352, 676, 709
Bse118I	RCCGGY	1 cut(s)	508
Bse1I	ACTGG	1 cut(s)	606
Bse3DI	GCAATG	1 cut(s)	886
BseBI	CCWGG	1 cut(s)	239
BseDI	CCNNGG	5 cut(s)	237, 283, 375, 721, 1016
BseGI	GGATG	2 cut(s)	469, 732
BseLI	CCNNNNNNNGG	3 cut(s)	352, 676, 709
BseMI	GCAATG	1 cut(s)	886
BseMII	CTCAG	1 cut(s)	21
BseNI	ACTGG	1 cut(s)	606
BseRI	GAGGAG	1 cut(s)	368
BseXI	GCAGC	1 cut(s)	321
BshFI	GGCC	3 cut(s)	362, 499, 947
BshTI	ACCGGT	1 cut(s)	508
BsiHKAI	GWGCWC	1 cut(s)	329
BsiSI	CCGG	2 cut(s)	509, 710
BslFI	GGGAC	1 cut(s)	220
BslI	CCNNNNNNNGG	3 cut(s)	352, 676, 709
BsmAI	GTCTC	2 cut(s)	9, 441
BsmFI	GGGAC	1 cut(s)	220
BsmI	GAATGC	1 cut(s)	288
BsnI	GGCC	3 cut(s)	362, 499, 947
Bsp119I	TTCGAA	1 cut(s)	339
Bsp1286I	GDGCHC	2 cut(s)	223, 329
Bsp143I	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
Bsp19I	CCATGG	1 cut(s)	283
BspACI	CCGC	3 cut(s)	67, 530, 695
BspANI	GGCC	3 cut(s)	362, 499, 947
BspCNI	CTCAG	1 cut(s)	22
BspLI	GGNNCC	2 cut(s)	210, 610
BspPI	GGATC	2 cut(s)	132, 720
BspT104I	TTCGAA	1 cut(s)	339
BsrDI	GCAATG	1 cut(s)	886
BsrFI	RCCGGY	1 cut(s)	508
BsrI	ACTGG	1 cut(s)	606
BssAI	RCCGGY	1 cut(s)	508
BssECI	CCNNGG	5 cut(s)	237, 283, 375, 721, 1016
BssMI	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
BssSI	CACGAG	1 cut(s)	1068
BssT1I	CCWWGG	3 cut(s)	283, 721, 1016
Bst2BI	CACGAG	1 cut(s)	1068
Bst2UI	CCWGG	1 cut(s)	239
Bst4CI	ACNGT	2 cut(s)	820, 987
BstBAI	YACGTR	1 cut(s)	109
BstBI	TTCGAA	1 cut(s)	339
BstC8I	GCNNGC	3 cut(s)	387, 671, 1045
BstDEI	CTNAG	3 cut(s)	30, 1051, 1077
BstDSI	CCRYGG	1 cut(s)	283
BstEII	GGTNACC	1 cut(s)	814
BstF5I	GGATG	2 cut(s)	469, 732
BstKTI	GATC	6 cut(s)	127, 318, 715, 808, 862, 977
BstMAI	GTCTC	2 cut(s)	9, 441
BstMBI	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
BstMWI	GCNNNNNNNGC	1 cut(s)	539
BstNI	CCWGG	1 cut(s)	239
BstNSI	RCATGY	2 cut(s)	373, 389
BstPI	GGTNACC	1 cut(s)	814
BstSCI	CCNGG	1 cut(s)	237
BstSNI	TACGTA	1 cut(s)	109
BstV1I	GCAGC	1 cut(s)	321
BstX2I	RGATCY	1 cut(s)	712
BstYI	RGATCY	1 cut(s)	712
BsuRI	GGCC	3 cut(s)	362, 499, 947
BtgI	CCRYGG	1 cut(s)	283
BtrI	CACGTC	1 cut(s)	322
BtsCI	GGATG	2 cut(s)	469, 732
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	3 cut(s)	24, 948, 1032
Cac8I	GCNNGC	3 cut(s)	387, 671, 1045
Cfr10I	RCCGGY	1 cut(s)	508
Cfr13I	GGNCC	3 cut(s)	209, 360, 983
Csp6I	GTAC	4 cut(s)	49, 73, 106, 367
CspAI	ACCGGT	1 cut(s)	508
CviAII	CATG	6 cut(s)	284, 313, 370, 386, 699, 970
CviQI	GTAC	4 cut(s)	49, 73, 106, 367
DdeI	CTNAG	3 cut(s)	30, 1051, 1077
DpnI	GATC	6 cut(s)	126, 317, 714, 807, 861, 976
DpnII	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
Eco105I	TACGTA	1 cut(s)	109
Eco130I	CCWWGG	3 cut(s)	283, 721, 1016
Eco24I	GRGCYC	1 cut(s)	223
Eco47I	GGWCC	2 cut(s)	209, 983
Eco91I	GGTNACC	1 cut(s)	814
EcoO65I	GGTNACC	1 cut(s)	814
EcoRI	GAATTC	2 cut(s)	653, 919
EcoRII	CCWGG	1 cut(s)	237
EcoT14I	CCWWGG	3 cut(s)	283, 721, 1016
EcoT22I	ATGCAT	1 cut(s)	387
EcoT38I	GRGCYC	1 cut(s)	223
ErhI	CCWWGG	3 cut(s)	283, 721, 1016
FaeI	CATG	6 cut(s)	287, 316, 373, 389, 702, 973
FaqI	GGGAC	1 cut(s)	220
FatI	CATG	6 cut(s)	283, 312, 369, 385, 698, 969
FauI	CCCGC	1 cut(s)	702
FbaI	TGATCA	1 cut(s)	859
Fnu4HI	GCNGC	2 cut(s)	310, 531
FokI	GGATG	2 cut(s)	456, 739
FriOI	GRGCYC	1 cut(s)	223
Fsp4HI	GCNGC	2 cut(s)	310, 531
FspBI	CTAG	3 cut(s)	408, 722, 1101
GluI	GCNGC	2 cut(s)	310, 531
GsuI	CTGGAG	1 cut(s)	463
HaeIII	GGCC	3 cut(s)	362, 499, 947
HapII	CCGG	2 cut(s)	509, 710
Hin1II	CATG	6 cut(s)	287, 316, 373, 389, 702, 973
HincII	GTYRAC	1 cut(s)	850
HindII	GTYRAC	1 cut(s)	850
HinfI	GANTC	3 cut(s)	909, 1007, 1097
HpaII	CCGG	2 cut(s)	509, 710
HphI	GGTGA	5 cut(s)	498, 808, 854, 869, 928
Hpy166II	GTNNAC	2 cut(s)	280, 850
Hpy188I	TCNGA	2 cut(s)	379, 742
Hpy188III	TCNNGA	3 cut(s)	454, 589, 1070
Hpy8I	GTNNAC	2 cut(s)	280, 850
Hpy99I	CGWCG	2 cut(s)	323, 991
HpyAV	CCTTC	3 cut(s)	497, 510, 776
HpyCH4III	ACNGT	2 cut(s)	820, 987
HpyCH4IV	ACGT	3 cut(s)	108, 321, 852
HpyCH4V	TGCA	3 cut(s)	205, 385, 955
HpyF10VI	GCNNNNNNNGC	1 cut(s)	539
HpyF3I	CTNAG	3 cut(s)	30, 1051, 1077
HpySE526I	ACGT	3 cut(s)	108, 321, 852
Hsp92II	CATG	6 cut(s)	287, 316, 373, 389, 702, 973
Ksp22I	TGATCA	1 cut(s)	859
Kzo9I	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
LmnI	GCTCC	2 cut(s)	183, 394
Lsp1109I	GCAGC	1 cut(s)	321
LweI	GCATC	1 cut(s)	717
MaeI	CTAG	3 cut(s)	408, 722, 1101
MaeII	ACGT	3 cut(s)	108, 321, 852
MaeIII	GTNAC	2 cut(s)	140, 814
MalI	GATC	6 cut(s)	126, 317, 714, 807, 861, 976
MboI	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
MboII	GAAGA	7 cut(s)	328, 495, 577, 644, 647, 755, 1096
MfeI	CAATTG	1 cut(s)	685
MflI	RGATCY	1 cut(s)	712
MhlI	GDGCHC	2 cut(s)	223, 329
MlyI	GAGTC	2 cut(s)	918, 1106
MmeI	TCCRAC	3 cut(s)	32, 186, 961
MnlI	CCTC	9 cut(s)	239, 346, 351, 385, 501, 513, 741, 958, 1074
Mph1103I	ATGCAT	1 cut(s)	387
MroXI	GAANNNNTTC	2 cut(s)	786, 1088
MseI	TTAA	3 cut(s)	414, 647, 1117
MspI	CCGG	2 cut(s)	509, 710
MspR9I	CCNGG	1 cut(s)	239
MunI	CAATTG	1 cut(s)	685
Mva1269I	GAATGC	1 cut(s)	288
MvaI	CCWGG	1 cut(s)	239
MwoI	GCNNNNNNNGC	1 cut(s)	539
NcoI	CCATGG	1 cut(s)	283
NdeII	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
NlaIII	CATG	6 cut(s)	287, 316, 373, 389, 702, 973
NlaIV	GGNNCC	2 cut(s)	210, 610
NmuCI	GTSAC	2 cut(s)	140, 814
NsiI	ATGCAT	1 cut(s)	387
NspI	RCATGY	2 cut(s)	373, 389
NspV	TTCGAA	1 cut(s)	339
PaeI	GCATGC	1 cut(s)	389
PciI	ACATGT	1 cut(s)	369
PctI	GAATGC	1 cut(s)	288
PdmI	GAANNNNTTC	2 cut(s)	786, 1088
PfeI	GAWTC	1 cut(s)	1007
PflMI	CCANNNNNTGG	1 cut(s)	676
PinAI	ACCGGT	1 cut(s)	508
PkrI	GCNGC	2 cut(s)	311, 532
PleI	GAGTC	2 cut(s)	917, 1105
PpsI	GAGTC	2 cut(s)	917, 1105
Ppu21I	YACGTR	1 cut(s)	109
PscI	ACATGT	1 cut(s)	369
PsiI	TTATAA	1 cut(s)	305
Psp1406I	AACGTT	1 cut(s)	852
Psp6I	CCWGG	1 cut(s)	237
PspEI	GGTNACC	1 cut(s)	814
PspGI	CCWGG	1 cut(s)	237
PspN4I	GGNNCC	2 cut(s)	210, 610
PspPI	GGNCC	3 cut(s)	209, 360, 983
PsuI	RGATCY	1 cut(s)	712
RsaI	GTAC	4 cut(s)	50, 74, 107, 368
RsaNI	GTAC	4 cut(s)	49, 73, 106, 367
SaqAI	TTAA	3 cut(s)	414, 647, 1117
SatI	GCNGC	2 cut(s)	310, 531
Sau3AI	GATC	6 cut(s)	124, 315, 712, 805, 859, 974
Sau96I	GGNCC	3 cut(s)	209, 360, 983
SchI	GAGTC	2 cut(s)	918, 1106
ScrFI	CCNGG	1 cut(s)	239
SduI	GDGCHC	2 cut(s)	223, 329
SfaNI	GCATC	1 cut(s)	717
SfuI	TTCGAA	1 cut(s)	339
SgrAI	CRCCGGYG	1 cut(s)	508
SinI	GGWCC	2 cut(s)	209, 983
SmlI	CTYRAG	4 cut(s)	173, 230, 866, 1094
SmoI	CTYRAG	4 cut(s)	173, 230, 866, 1094
SnaBI	TACGTA	1 cut(s)	109
SphI	GCATGC	1 cut(s)	389
SsiI	CCGC	3 cut(s)	67, 530, 695
SspMI	CTAG	3 cut(s)	408, 722, 1101
StyD4I	CCNGG	1 cut(s)	237
StyI	CCWWGG	3 cut(s)	283, 721, 1016
TaaI	ACNGT	2 cut(s)	820, 987
TaiI	ACGT	3 cut(s)	111, 324, 855
TaqI	TCGA	6 cut(s)	127, 318, 339, 397, 588, 934
TatI	WGTACW	1 cut(s)	366
TauI	GCSGC	1 cut(s)	533
TfiI	GAWTC	1 cut(s)	1007
Tru1I	TTAA	3 cut(s)	414, 647, 1117
Tru9I	TTAA	3 cut(s)	414, 647, 1117
TscAI	CASTG	3 cut(s)	24, 948, 1039
TseFI	GTSAC	2 cut(s)	140, 814
TseI	GCWGC	1 cut(s)	309
Tsp45I	GTSAC	2 cut(s)	140, 814
TspDTI	ATGAA	4 cut(s)	789, 958, 1020, 1053
TspGWI	ACGGA	1 cut(s)	417
TspRI	CASTG	3 cut(s)	24, 948, 1039
Van91I	CCANNNNNTGG	1 cut(s)	676
VpaK11BI	GGWCC	2 cut(s)	209, 983
XapI	RAATTY	4 cut(s)	653, 919, 936, 1087
XceI	RCATGY	2 cut(s)	373, 389
XcmI	CCANNNNNNNNNTGG	2 cut(s)	743, 841
XmaJI	CCTAGG	1 cut(s)	721
XmnI	GAANNNNTTC	2 cut(s)	786, 1088
XspI	CTAG	3 cut(s)	408, 722, 1101
Zsp2I	ATGCAT	1 cut(s)	387

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.