Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0003084

Physical Location & Seq

Genomic Coordinates Forward (+)

30047631 .. 30051824

Gene Structure 4194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1224200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGCCAAATTCATATACACAAAAACCCAAAAAAAAAATGGCAGTTCTTGAAACCATACGGTCTCAGTTGCCACTTCAAGAATCCTCATTTCTCAACACCAGCACTGTCGTTTCACTCACTGTGTTCTTCACGCTCCTCTGCGTTTGTATAATTATCGGTCATTTGCTCGAAGAGAACCGCTGGGCCAATGAATCGATCACTGCCCTTCTCTTGGGTTTGGTTGCTGGAGTGGTGGTGTTGCTGGTGACAGGGTTCGAAAGCTCGAGGATTTTGATCTTTAGCGAGAACTTGTTCTTTCTGTATCTACTTCCTCCAATCATTTTCAATGCCGGTTTCCAGGTCAAGAAAAAGCAGTTTTTCAAGAATTTCACCACAATTTTGTTGTTTGGAATCGTCGGTACAGTAATTTCTTTCTGCCTCATATCACTAGGTGCCTATTTACTTTTCAATAGATTTGGTTTCTCAACTCTGACCATTAAGGACATCCTAGCGATTGGTGCCATATTCTCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTAAATCAAGATGAGACACCGTTTCTTTACAGTATCGTGTTTGGGGAGGGAGTAGTGAATGATGCCACCTCCATTGTGCTTTTCAATGCAGTACAATCGCTAGATGTCAGCAACCTCAGCGCGCTTACAGCGTTGACCTTGTTGGGGAATTTTCTTTACCTCTTCTTCACCAGTACTCTTCTTGGTATAGCAGCTGGTCTGATTAGCGCTTTTATCATAAAAACGCTTTACTTTGGAAGGCATTCTACAGATCGTGAAGTTGCGCTGATGATTCTTATGGCTTATTTGTCATACATGTTGGCTGAGCTTCTGAATCTAAGTGGAATTTTGACAGTGTTTTTCTGCGGCATAGTTATGTCACATTATACATGGCACAATGTTACAGAAAGCTCGAGGGTAACAACCAAGCATGCATTTGCAACATTGTCATTCATTGCAGAAACCTTTATATTCCTTTATGTTGGCATGGATGCCTTGGACATTGACAAATGGAAAGCCAGCAAGGCAAGTCCAGGGACTTCAGTTGGTGTCAGTTCAATCTTGTTAGGACTAGTATTAGTCGGAAGGGCAGCATTTGTCTTCCCGATTGCGAACATCAAAAACTGTTTTAAGAATAGAGAAGGTACGAAAATCAAGTTCAAAGACCAGTTTACAATGTGGTGGGCAGGCCTAATGAGGGGTGCAGTCACTATTGCGTTGTCATACAACGAATTTGCAGACAATACCAAAACGACATCAACGCAAGATCGTTCTTTGATGATCACCAGTACCATAATTGTTGTTCTCTTCAGCACAGTGGTATTTGGCTCCATCACAAAGCCATTAATCTCAGCTCTGATGCACCCACATGCAAAAGCAAACAATTCAGATGCAACTGATATGCCTAGCCTAGAAGACTTGAGGCTACGTTTCCTGGAAACCGGCGAGGCAAGTGAGGGAGGCAACAGTGAGCCAGCCAGAAAACCAAGCAGCTTTAGGTTGTTAATCACATATCCAACTTCAACTGTTCACTACTTTTGGAGGAAGTTTGATGACAAGTTCATGAGACCGGTTTTCGGGGGACGGGGTTTTGTTCCATTTGTTCCTGGTTCACCTAGTGGTGCAGCAGAAGATCAAGCTGCAGAACATACTGAACATATTGAACATACTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0008150 GO:0008324 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

565

Amino Acids

62.25

Weight (kDa)

7.65

Isoelectric Point (pI)

33.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	57 - 456	6.9e-59	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55470
fragaria_vesca	FvH4_3g30310 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300
malus_domestica	MD04G1209700.v1.1 MD11G1207200.v1.1 MD12G1224200.v1.1
prunus_persica	Prupe.4G228200_v2.0.a1 Prupe.4G228200_v2.0.a1 Prupe.4G228200_v2.0.a1 Prupe.6G330600_v2.0.a1
pyrus_communis	pycom04g18580 pycom12g20970
rosa_chinensis	RchiOBHm_Chr3g0454041 RchiOBHm_Chr5g0056181
rosa_laevigata	RLG00000025487 RLG00000035061
rosa_multiflora	Rmu_sc0000680.1_g000026
rosa_roxburghii	Rroxscaffold_1G00024110 Rroxscaffold_6G00430830
rosa_rugosa	Rorug02G0652500 Rorug05G0297800
rosa_samantha	Rh3AG055200 Rh3BG056800 Rh3CG056000 Rh3DG057300 Rh5AG369000 Rh5BG380000 Rh5CG402800 Rh5DG393000
rosa_wichuraiana	Rw0G004440 Rw0G012680 Rw3G004240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	526
AccB1I	GGYRCC	2 cut(s)	431, 497
AccII	CGCG	1 cut(s)	662
AciI	CCGC	2 cut(s)	178, 885
AcsI	RAATTY	5 cut(s)	7, 364, 688, 864, 1250
AcuI	CTGAAG	2 cut(s)	1044, 1312
AdeI	CACNNNGTG	2 cut(s)	431, 1637
AfaI	GTAC	6 cut(s)	400, 529, 633, 715, 1165, 1309
AfeI	AGCGCT	1 cut(s)	748
AfiI	CCNNNNNNNGG	4 cut(s)	211, 684, 1216, 1595
AflIII	ACRYGT	1 cut(s)	834
AgeI	ACCGGT	1 cut(s)	1588
AhlI	ACTAGT	1 cut(s)	1090
AjnI	CCWGG	4 cut(s)	336, 1051, 1452, 1624
AluBI	AGCT	7 cut(s)	261, 734, 847, 930, 1373, 1512, 1658
AluI	AGCT	7 cut(s)	261, 734, 847, 930, 1373, 1512, 1658
Alw26I	GTCTC	3 cut(s)	66, 548, 1579
AlwNI	CAGNNNCTG	1 cut(s)	515
Ama87I	CYCGRG	2 cut(s)	262, 931
Aor51HI	AGCGCT	1 cut(s)	748
AoxI	GGCC	2 cut(s)	183, 1207
ApeKI	GCWGC	5 cut(s)	731, 1109, 1509, 1643, 1658
ApoI	RAATTY	5 cut(s)	7, 364, 688, 864, 1250
AseI	ATTAAT	1 cut(s)	1364
AsiGI	ACCGGT	1 cut(s)	1588
Asp700I	GAANNNNTTC	2 cut(s)	290, 781
AspLEI	GCGC	4 cut(s)	662, 664, 749, 805
AspS9I	GGNCC	1 cut(s)	183
AsuHPI	GGTGA	5 cut(s)	256, 361, 700, 1294, 1623
AsuII	TTCGAA	1 cut(s)	255
AvaI	CYCGRG	2 cut(s)	262, 931
BanI	GGYRCC	2 cut(s)	431, 497
BarI	GAAGNNNNNNTAC	2 cut(s)	769, 801
BbsI	GAAGAC	2 cut(s)	1111, 1440
BbvCI	CCTCAGC	1 cut(s)	656
BbvI	GCAGC	5 cut(s)	743, 1121, 1521, 1645, 1655
BccI	CCATC	1 cut(s)	1358
BcgI	CGANNNNNNTGC	2 cut(s)	618, 652
BciT130I	CCWGG	4 cut(s)	338, 1053, 1454, 1626
BclI	TGATCA	1 cut(s)	1299
BcoDI	GTCTC	3 cut(s)	66, 548, 1579
BcuI	ACTAGT	1 cut(s)	1090
BfaI	CTAG	7 cut(s)	428, 488, 641, 1091, 1425, 1430, 1635
BfmI	CTRYAG	2 cut(s)	786, 1659
BfoI	RGCGCY	1 cut(s)	750
BfuAI	ACCTGC	1 cut(s)	526
BglI	GCCNNNNNGGC	1 cut(s)	1043
BisI	GCNGC	6 cut(s)	732, 886, 1110, 1510, 1644, 1659
BlpI	GCTNAGC	1 cut(s)	843
BlsI	GCNGC	6 cut(s)	733, 887, 1111, 1511, 1645, 1660
BmcAI	AGTACT	1 cut(s)	715
Bme1390I	CCNGG	4 cut(s)	338, 1053, 1454, 1626
BmeT110I	CYCGRG	2 cut(s)	262, 931
BmgT120I	GGNCC	1 cut(s)	183
BmiI	GGNNCC	3 cut(s)	433, 499, 1348
BmrFI	CCNGG	4 cut(s)	338, 1053, 1454, 1626
BmsI	GCATC	4 cut(s)	592, 1000, 1368, 1399
BpiI	GAAGAC	2 cut(s)	1111, 1440
BpmI	CTGGAG	1 cut(s)	246
Bpu10I	CCTNAGC	1 cut(s)	656
Bpu1102I	GCTNAGC	1 cut(s)	843
Bpu14I	TTCGAA	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	1459
Bsa29I	ATCGAT	1 cut(s)	194
BsaBI	GATNNNNATC	1 cut(s)	272
BsaI	GGTCTC	2 cut(s)	66, 1579
BsaJI	CCNNGG	2 cut(s)	1014, 1052
BsaWI	WCCGGW	1 cut(s)	1588
BsaXI	ACNNNNNCTCC	2 cut(s)	219, 249
Bsc4I	CCNNNNNNNGG	4 cut(s)	211, 684, 1216, 1595
Bse118I	RCCGGY	3 cut(s)	329, 1460, 1588
Bse1I	ACTGG	3 cut(s)	711, 1186, 1305
Bse3DI	GCAATG	2 cut(s)	530, 972
Bse8I	GATNNNNATC	1 cut(s)	272
BseBI	CCWGG	4 cut(s)	338, 1053, 1454, 1626
BseCI	ATCGAT	1 cut(s)	194
BseDI	CCNNGG	2 cut(s)	1014, 1052
BseGI	GGATG	2 cut(s)	483, 1015
BseJI	GATNNNNATC	1 cut(s)	272
BseLI	CCNNNNNNNGG	4 cut(s)	211, 684, 1216, 1595
BseMI	GCAATG	2 cut(s)	530, 972
BseMII	CTCAG	5 cut(s)	77, 522, 670, 834, 1383
BseNI	ACTGG	3 cut(s)	711, 1186, 1305
BsePI	GCGCGC	1 cut(s)	660
BseRI	GAGGAG	1 cut(s)	125
BseXI	GCAGC	5 cut(s)	743, 1121, 1521, 1645, 1655
BseYI	CCCAGC	1 cut(s)	180
BsgI	GTGCAG	2 cut(s)	1242, 1662
Bsh1236I	CGCG	1 cut(s)	662
BshFI	GGCC	2 cut(s)	185, 1209
BshNI	GGYRCC	2 cut(s)	431, 497
BshTI	ACCGGT	1 cut(s)	1588
BshVI	ATCGAT	1 cut(s)	194
BsiHKCI	CYCGRG	2 cut(s)	262, 931
BsiSI	CCGG	3 cut(s)	330, 1461, 1589
BslFI	GGGAC	2 cut(s)	1069, 1614
BslI	CCNNNNNNNGG	4 cut(s)	211, 684, 1216, 1595
BsmAI	GTCTC	3 cut(s)	66, 548, 1579
BsmFI	GGGAC	2 cut(s)	1069, 1614
BsmI	GAATGC	1 cut(s)	781
BsnI	GGCC	2 cut(s)	185, 1209
Bso31I	GGTCTC	2 cut(s)	66, 1579
BsoBI	CYCGRG	2 cut(s)	262, 931
Bsp119I	TTCGAA	1 cut(s)	255
Bsp1407I	TGTACA	1 cut(s)	527
Bsp143I	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
Bsp1720I	GCTNAGC	1 cut(s)	843
BspACI	CCGC	2 cut(s)	178, 885
BspANI	GGCC	2 cut(s)	185, 1209
BspCNI	CTCAG	5 cut(s)	76, 521, 669, 835, 1382
BspDI	ATCGAT	1 cut(s)	194
BspFNI	CGCG	1 cut(s)	662
BspHI	TCATGA	1 cut(s)	1581
BspLI	GGNNCC	3 cut(s)	433, 499, 1348
BspMAI	CTGCAG	1 cut(s)	1663
BspMI	ACCTGC	1 cut(s)	526
BspT104I	TTCGAA	1 cut(s)	255
BspT107I	GGYRCC	2 cut(s)	431, 497
BspTNI	GGTCTC	2 cut(s)	66, 1579
BsrDI	GCAATG	2 cut(s)	530, 972
BsrFI	RCCGGY	3 cut(s)	329, 1460, 1588
BsrGI	TGTACA	1 cut(s)	527
BsrI	ACTGG	3 cut(s)	711, 1186, 1305
BssAI	RCCGGY	3 cut(s)	329, 1460, 1588
BssECI	CCNNGG	2 cut(s)	1014, 1052
BssHII	GCGCGC	1 cut(s)	660
BssMI	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
BssT1I	CCWWGG	1 cut(s)	1014
Bst2UI	CCWGG	4 cut(s)	338, 1053, 1454, 1626
Bst6I	CTCTTC	4 cut(s)	165, 707, 723, 1331
BstAUI	TGTACA	1 cut(s)	527
BstBI	TTCGAA	1 cut(s)	255
BstC8I	GCNNGC	5 cut(s)	662, 951, 1039, 1207, 1494
BstDEI	CTNAG	6 cut(s)	63, 508, 656, 843, 857, 1369
BstF5I	GGATG	2 cut(s)	483, 1015
BstFNI	CGCG	1 cut(s)	662
BstH2I	RGCGCY	1 cut(s)	750
BstHHI	GCGC	4 cut(s)	662, 664, 749, 805
BstKTI	GATC	6 cut(s)	198, 276, 793, 1288, 1302, 1654
BstMAI	GTCTC	3 cut(s)	66, 548, 1579
BstMBI	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
BstMWI	GCNNNNNNNGC	4 cut(s)	497, 657, 668, 1043
BstNI	CCWGG	4 cut(s)	338, 1053, 1454, 1626
BstNSI	RCATGY	3 cut(s)	838, 953, 1391
BstSCI	CCNGG	4 cut(s)	336, 1051, 1452, 1624
BstSFI	CTRYAG	2 cut(s)	786, 1659
BstUI	CGCG	1 cut(s)	662
BstV1I	GCAGC	5 cut(s)	743, 1121, 1521, 1645, 1655
BstV2I	GAAGAC	2 cut(s)	1111, 1440
Bsu15I	ATCGAT	1 cut(s)	194
BsuRI	GGCC	2 cut(s)	185, 1209
BsuTUI	ATCGAT	1 cut(s)	194
BtsCI	GGATG	2 cut(s)	483, 1015
BtsI	GCAGTG	1 cut(s)	198
BtsIMutI	CAGTG	6 cut(s)	102, 117, 198, 879, 1341, 1492
BveI	ACCTGC	1 cut(s)	526
Cac8I	GCNNGC	5 cut(s)	662, 951, 1039, 1207, 1494
CaiI	CAGNNNCTG	1 cut(s)	515
CciI	TCATGA	1 cut(s)	1581
CfoI	GCGC	4 cut(s)	662, 664, 749, 805
Cfr10I	RCCGGY	3 cut(s)	329, 1460, 1588
Cfr13I	GGNCC	1 cut(s)	183
ClaI	ATCGAT	1 cut(s)	194
Csp6I	GTAC	6 cut(s)	399, 528, 632, 714, 1164, 1308
CspAI	ACCGGT	1 cut(s)	1588
CspCI	CAANNNNNGTGG	2 cut(s)	595, 630
CviAII	CATG	6 cut(s)	835, 909, 950, 1006, 1388, 1582
CviQI	GTAC	6 cut(s)	399, 528, 632, 714, 1164, 1308
DdeI	CTNAG	6 cut(s)	63, 508, 656, 843, 857, 1369
DpnI	GATC	6 cut(s)	197, 275, 792, 1287, 1301, 1653
DpnII	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
DraIII	CACNNNGTG	2 cut(s)	431, 1637
Eam1104I	CTCTTC	4 cut(s)	165, 707, 723, 1331
EarI	CTCTTC	4 cut(s)	165, 707, 723, 1331
Eco130I	CCWWGG	1 cut(s)	1014
Eco147I	AGGCCT	1 cut(s)	1209
Eco31I	GGTCTC	2 cut(s)	66, 1579
Eco47III	AGCGCT	1 cut(s)	748
Eco57I	CTGAAG	2 cut(s)	1044, 1312
Eco88I	CYCGRG	2 cut(s)	262, 931
EcoRII	CCWGG	4 cut(s)	336, 1051, 1452, 1624
EcoT14I	CCWWGG	1 cut(s)	1014
EcoT22I	ATGCAT	1 cut(s)	955
ErhI	CCWWGG	1 cut(s)	1014
FaeI	CATG	6 cut(s)	838, 912, 953, 1009, 1391, 1585
FaqI	GGGAC	2 cut(s)	1069, 1614
FatI	CATG	6 cut(s)	834, 908, 949, 1005, 1387, 1581
FbaI	TGATCA	1 cut(s)	1299
Fnu4HI	GCNGC	6 cut(s)	732, 886, 1110, 1510, 1644, 1659
FokI	GGATG	2 cut(s)	470, 1022
Fsp4HI	GCNGC	6 cut(s)	732, 886, 1110, 1510, 1644, 1659
FspBI	CTAG	7 cut(s)	428, 488, 641, 1091, 1425, 1430, 1635
GlaI	GCGC	4 cut(s)	661, 663, 748, 804
GluI	GCNGC	6 cut(s)	732, 886, 1110, 1510, 1644, 1659
GsaI	CCCAGC	1 cut(s)	184
GsuI	CTGGAG	1 cut(s)	246
HaeII	RGCGCY	1 cut(s)	750
HaeIII	GGCC	2 cut(s)	185, 1209
HapII	CCGG	3 cut(s)	330, 1461, 1589
HhaI	GCGC	4 cut(s)	662, 664, 749, 805
Hin1II	CATG	6 cut(s)	838, 912, 953, 1009, 1391, 1585
Hin6I	GCGC	4 cut(s)	660, 662, 747, 803
HinP1I	GCGC	4 cut(s)	660, 662, 747, 803
HincII	GTYRAC	1 cut(s)	675
HindII	GTYRAC	1 cut(s)	675
HinfI	GANTC	6 cut(s)	80, 191, 390, 518, 811, 853
HpaII	CCGG	3 cut(s)	330, 1461, 1589
HphI	GGTGA	5 cut(s)	256, 361, 700, 1294, 1623
Hpy166II	GTNNAC	4 cut(s)	675, 1191, 1549, 1631
Hpy188I	TCNGA	6 cut(s)	471, 741, 852, 1103, 1377, 1408
Hpy188III	TCNNGA	8 cut(s)	47, 77, 343, 361, 548, 794, 1123, 1582
Hpy8I	GTNNAC	4 cut(s)	675, 1191, 1549, 1631
Hpy99I	CGWCG	1 cut(s)	398
HpyAV	CCTTC	4 cut(s)	215, 771, 1098, 1154
HpyCH4IV	ACGT	1 cut(s)	1447
HpyF10VI	GCNNNNNNNGC	4 cut(s)	497, 657, 668, 1043
HpyF3I	CTNAG	6 cut(s)	63, 508, 656, 843, 857, 1369
HpySE526I	ACGT	1 cut(s)	1447
Hsp92II	CATG	6 cut(s)	838, 912, 953, 1009, 1391, 1585
HspAI	GCGC	4 cut(s)	660, 662, 747, 803
Ksp22I	TGATCA	1 cut(s)	1299
Kzo9I	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
LmnI	GCTCC	2 cut(s)	138, 1352
Lsp1109I	GCAGC	5 cut(s)	743, 1121, 1521, 1645, 1655
LweI	GCATC	4 cut(s)	592, 1000, 1368, 1399
MaeI	CTAG	7 cut(s)	428, 488, 641, 1091, 1425, 1430, 1635
MaeII	ACGT	1 cut(s)	1447
MaeIII	GTNAC	5 cut(s)	244, 897, 919, 937, 1225
MalI	GATC	6 cut(s)	197, 275, 792, 1287, 1301, 1653
MboI	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
MboII	GAAGA	9 cut(s)	118, 182, 694, 697, 710, 1111, 1318, 1445, 1661
MmeI	TCCRAC	2 cut(s)	1081, 1559
Mph1103I	ATGCAT	1 cut(s)	955
MroXI	GAANNNNTTC	2 cut(s)	290, 781
MseI	TTAA	4 cut(s)	477, 1149, 1364, 1523
MslI	CAYNNNNRTG	2 cut(s)	893, 1386
MspA1I	CMGCKG	2 cut(s)	180, 734
MspI	CCGG	3 cut(s)	330, 1461, 1589
MspR9I	CCNGG	4 cut(s)	338, 1053, 1454, 1626
Mva1269I	GAATGC	1 cut(s)	781
MvaI	CCWGG	4 cut(s)	338, 1053, 1454, 1626
MvnI	CGCG	1 cut(s)	662
MwoI	GCNNNNNNNGC	4 cut(s)	497, 657, 668, 1043
NdeII	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
NlaIII	CATG	6 cut(s)	838, 912, 953, 1009, 1391, 1585
NlaIV	GGNNCC	3 cut(s)	433, 499, 1348
NmuCI	GTSAC	3 cut(s)	244, 897, 1225
NsiI	ATGCAT	1 cut(s)	955
NspI	RCATGY	3 cut(s)	838, 953, 1391
NspV	TTCGAA	1 cut(s)	255
PaeI	GCATGC	1 cut(s)	953
PaeR7I	CTCGAG	2 cut(s)	262, 931
PagI	TCATGA	1 cut(s)	1581
PauI	GCGCGC	1 cut(s)	660
PceI	AGGCCT	1 cut(s)	1209
PciI	ACATGT	1 cut(s)	834
PctI	GAATGC	1 cut(s)	781
PdmI	GAANNNNTTC	2 cut(s)	290, 781
PfeI	GAWTC	6 cut(s)	80, 191, 390, 518, 811, 853
PfoI	TCCNGGA	1 cut(s)	1452
PinAI	ACCGGT	1 cut(s)	1588
PkrI	GCNGC	6 cut(s)	733, 887, 1111, 1511, 1645, 1660
PscI	ACATGT	1 cut(s)	834
PshBI	ATTAAT	1 cut(s)	1364
Psp6I	CCWGG	4 cut(s)	336, 1051, 1452, 1624
PspFI	CCCAGC	1 cut(s)	180
PspGI	CCWGG	4 cut(s)	336, 1051, 1452, 1624
PspN4I	GGNNCC	3 cut(s)	433, 499, 1348
PspPI	GGNCC	1 cut(s)	183
PspXI	VCTCGAGB	2 cut(s)	262, 931
PstI	CTGCAG	1 cut(s)	1663
PstNI	CAGNNNCTG	1 cut(s)	515
PteI	GCGCGC	1 cut(s)	660
PvuII	CAGCTG	1 cut(s)	734
RsaI	GTAC	6 cut(s)	400, 529, 633, 715, 1165, 1309
RsaNI	GTAC	6 cut(s)	399, 528, 632, 714, 1164, 1308
RseI	CAYNNNNRTG	2 cut(s)	893, 1386
SaqAI	TTAA	4 cut(s)	477, 1149, 1364, 1523
SatI	GCNGC	6 cut(s)	732, 886, 1110, 1510, 1644, 1659
Sau3AI	GATC	6 cut(s)	195, 273, 790, 1285, 1299, 1651
Sau96I	GGNCC	1 cut(s)	183
ScaI	AGTACT	1 cut(s)	715
ScrFI	CCNGG	4 cut(s)	338, 1053, 1454, 1626
SfaNI	GCATC	4 cut(s)	592, 1000, 1368, 1399
SfcI	CTRYAG	2 cut(s)	786, 1659
Sfr274I	CTCGAG	2 cut(s)	262, 931
SfuI	TTCGAA	1 cut(s)	255
SlaI	CTCGAG	2 cut(s)	262, 931
SmiMI	CAYNNNNRTG	2 cut(s)	893, 1386
SmlI	CTYRAG	3 cut(s)	262, 931, 1438
SmoI	CTYRAG	3 cut(s)	262, 931, 1438
SpeI	ACTAGT	1 cut(s)	1090
SphI	GCATGC	1 cut(s)	953
SseBI	AGGCCT	1 cut(s)	1209
SsiI	CCGC	2 cut(s)	178, 885
SspMI	CTAG	7 cut(s)	428, 488, 641, 1091, 1425, 1430, 1635
StuI	AGGCCT	1 cut(s)	1209
StyD4I	CCNGG	4 cut(s)	336, 1051, 1452, 1624
StyI	CCWWGG	1 cut(s)	1014
TaiI	ACGT	1 cut(s)	1450
TaqI	TCGA	5 cut(s)	168, 194, 255, 263, 932
TaqII	GACCGA	1 cut(s)	146
TatI	WGTACW	3 cut(s)	527, 631, 713
TauI	GCSGC	1 cut(s)	888
TfiI	GAWTC	6 cut(s)	80, 191, 390, 518, 811, 853
Tru1I	TTAA	4 cut(s)	477, 1149, 1364, 1523
Tru9I	TTAA	4 cut(s)	477, 1149, 1364, 1523
TscAI	CASTG	6 cut(s)	109, 124, 205, 879, 1341, 1492
TseFI	GTSAC	3 cut(s)	244, 897, 1225
TseI	GCWGC	5 cut(s)	731, 1109, 1509, 1643, 1658
Tsp45I	GTSAC	3 cut(s)	244, 897, 1225
TspDTI	ATGAA	3 cut(s)	204, 961, 1570
TspRI	CASTG	6 cut(s)	109, 124, 205, 879, 1341, 1492
VspI	ATTAAT	1 cut(s)	1364
XapI	RAATTY	5 cut(s)	7, 364, 688, 864, 1250
XceI	RCATGY	3 cut(s)	838, 953, 1391
XcmI	CCANNNNNNNNNTGG	1 cut(s)	34
XhoI	CTCGAG	2 cut(s)	262, 931
XmnI	GAANNNNTTC	2 cut(s)	290, 781
XspI	CTAG	7 cut(s)	428, 488, 641, 1091, 1425, 1430, 1635
ZrmI	AGTACT	1 cut(s)	715
Zsp2I	ATGCAT	1 cut(s)	955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.