Prupe.4G228200_v2.0.a1

Sodium hydrogen exchanger

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
14567322 .. 14572853
5532 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G228200.3

Sequence Viewer

Length: 1590 bp
ATGACAGAAATGGCGGGGAATGAGGGTGTGTATGAGTTTGCAAAAAACTTGGCTCACGAGCATGCGCAGGTGATACCAGTCTCGGTCTTTGTGGCGGTTCTCTGTCTTTGTTTGGCCGTCGGCCATTTGCTTGAAGAAAATCGATGGGTCAACGAATCCATTACTGCCATTTGCATCGGATGCATAGCTGGAACAATAATTTTGCTTGTGAGCAAGGGCAAAAGTTCCCATATTCTGAGATTTAATGAAGAGTTGTTCTTTATATATCTCTTGCCACCTATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTTTTTCGGAACTTCTTAACCATCTTAATGTTTGGGGTGATTGGTGTTTTCATTTCAACCTCCATCATAGCAGTTGGCTCCTGGTTGCTGTTTCCTAAGTTGGGCTTTGTTGGCCTGAATGCACGAGACTATCTCGCTGTAGGAACAATTTTTTCATCAACTGATACAGTGTGTACACTGCAGGTTCTTCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTTGGGGAAGGAGTGGTGAATGATGCAACATCAGTTGTCCTGTTCAATGCAATTCAAAAGATTGATGTTACTAGGCTTAGTGGCGCGAATGGACTTCGTGTCGTTGGAGATTTTCTATACCTATTCTTCACAAGCACTGCCCTTGGAATTGCATTTGGACTTTTGGCAGCATATGCCCTTAAAACCTTATGCTTTGGAAGGCATTCGAGCATCCGTGAGATTTCCTTAATGGTTCTACTGGCTTATCTGTCTTACATGGTGGCTGAGTTGTTAGAACTGAGTGGAATTCTGACCGTTTTCTTTTGCGGGATTCTCATGTCGCATTATGCATGGCATAATGTCACTGAAAGTTCAAGAATCACAACCAGGCATGTATTTGCAATGATGTCATTCATAGCAGAAACATTCATATTTCTTTATGTGGGAATGGATGCTCTTGACATTGAGAAGTGGAAGATAACTACATTAAGCCTTGGGGATTCACTGGGCATCTATAGTACAATACTCGTATTAATATTGCTCGGACGTGCTGCATTTGTATTCCCTCTCTCAGCAATCTCCAATTACATGAATAGACGAGCTACGGGATCATCTTCACTTTCATTCAAACACCAGGTAATCATATGTTGGGCTGGGCTAATCAGAGGAGCTGTCTCTATTGCTTTGGCTTTTAAACAGTTCACATATTCTGGTGTCACATGGGATCCAGTCAATGCTACGATGATTACTAACACCATAATCGTTGTCCTCTTCAGTACACTGGTGTTTGGCTTTCTGACAAAGCCACTTACAAATTATCTGCTTCCTCACGCTGCAACTAGCACCCTTAACCGTAAAGAGTCAAAGGACATATCAGAGGACATGAACCTGCCTTTGCTCTCCTTTGATGAATCTGCTGAGACCAATATCAGTCGTGCAAAGGATAATTTGTCCATGTTGATGGAGAGACCTGTATACACCATACATTTTTACTGGAGGAGGTTTGATGATGCCTACATGAGACCAATATTTGGAGGGCCACTTGCCAATCAGTCTGCTGCTGCTTGA

Protein Analysis

530

Amino Acids

58.63

Weight (kDa)

6.86

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 58
Acc16I TGCGCA 1 cut(s) 66
Acc36I ACCTGC 3 cut(s) 58, 490, 1419
AccB7I CCANNNNNTGG 1 cut(s) 1553
AccI GTMKAC 1 cut(s) 1497
AccII CGCG 1 cut(s) 629
AciI CCGC 3 cut(s) 14, 95, 849
AclWI GGATC 3 cut(s) 1138, 1241, 1254
AcoI YGGCCR 2 cut(s) 114, 121
AcsI RAATTY 1 cut(s) 828
AcuI CTGAAG 1 cut(s) 1279
AfaI GTAC 3 cut(s) 493, 1042, 1300
AfiI CCNNNNNNNGG 2 cut(s) 419, 1553
AgsI TTSAA 7 cut(s) 134, 289, 375, 589, 599, 897, 1150
AhdI GACNNNNNGTC 1 cut(s) 641
AjiI CACGTC 1 cut(s) 1070
AjnI CCWGG 3 cut(s) 398, 908, 1155
AluBI AGCT 3 cut(s) 188, 1124, 1193
AluI AGCT 3 cut(s) 188, 1124, 1193
Alw26I GTCTC 6 cut(s) 85, 438, 1201, 1436, 1483, 1537
AlwI GGATC 3 cut(s) 1138, 1241, 1254
AoxI GGCC 4 cut(s) 114, 121, 430, 1559
ApeKI GCWGC 5 cut(s) 710, 1073, 1355, 1580, 1583
ApoI RAATTY 1 cut(s) 828
AseI ATTAAT 1 cut(s) 1055
Asp700I GAANNNNTTC 1 cut(s) 745
AspLEI GCGC 2 cut(s) 67, 629
AspS9I GGNCC 1 cut(s) 1559
AsuHPI GGTGA 3 cut(s) 82, 367, 571
BamHI GGATCC 1 cut(s) 1246
BauI CACGAG 2 cut(s) 56, 441
BbvI GCAGC 5 cut(s) 722, 1060, 1342, 1567, 1570
BccI CCATC 4 cut(s) 138, 347, 389, 1477
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 3 cut(s) 400, 910, 1157
BcoDI GTCTC 6 cut(s) 85, 438, 1201, 1436, 1483, 1537
BfaI CTAG 3 cut(s) 539, 615, 1362
BfmI CTRYAG 3 cut(s) 456, 497, 1036
BfuAI ACCTGC 3 cut(s) 58, 490, 1419
BisI GCNGC 5 cut(s) 711, 1074, 1356, 1581, 1584
BlsI GCNGC 5 cut(s) 712, 1075, 1357, 1582, 1585
Bme1390I CCNGG 3 cut(s) 400, 910, 1157
BmeRI GACNNNNNGTC 1 cut(s) 641
BmgBI CACGTC 1 cut(s) 1070
BmgT120I GGNCC 1 cut(s) 1559
BmiI GGNNCC 2 cut(s) 397, 1248
BmrFI CCNGG 3 cut(s) 400, 910, 1157
BmrI ACTGGG 1 cut(s) 1037
BmsI GCATC 7 cut(s) 170, 183, 556, 762, 964, 1041, 1522
BmuI ACTGGG 1 cut(s) 1037
BplI GAGNNNNNCTC 2 cut(s) 435, 467
BpmI CTGGAG 1 cut(s) 1537
Bsa29I ATCGAT 1 cut(s) 142
BsaI GGTCTC 3 cut(s) 1436, 1483, 1537
BsaJI CCNNGG 2 cut(s) 685, 1015
Bsc4I CCNNNNNNNGG 2 cut(s) 419, 1553
Bse1I ACTGG 6 cut(s) 77, 786, 1032, 1250, 1308, 1520
Bse3DI GCAATG 1 cut(s) 930
BseBI CCWGG 3 cut(s) 400, 910, 1157
BseCI ATCGAT 1 cut(s) 142
BseDI CCNNGG 2 cut(s) 685, 1015
BseGI GGATG 3 cut(s) 185, 753, 979
BseLI CCNNNNNNNGG 2 cut(s) 419, 1553
BseMI GCAATG 1 cut(s) 930
BseMII CTCAG 5 cut(s) 227, 798, 812, 1107, 1431
BseNI ACTGG 6 cut(s) 77, 786, 1032, 1250, 1308, 1520
BseRI GAGGAG 2 cut(s) 1203, 1534
BseXI GCAGC 5 cut(s) 722, 1060, 1342, 1567, 1570
BseYI CCCAGC 1 cut(s) 1175
Bsh1236I CGCG 1 cut(s) 629
BshFI GGCC 4 cut(s) 116, 123, 432, 1561
BshVI ATCGAT 1 cut(s) 142
BslI CCNNNNNNNGG 2 cut(s) 419, 1553
BsmAI GTCTC 6 cut(s) 85, 438, 1201, 1436, 1483, 1537
BsmI GAATGC 2 cut(s) 442, 745
BsnI GGCC 4 cut(s) 116, 123, 432, 1561
Bso31I GGTCTC 3 cut(s) 1436, 1483, 1537
Bsp1407I TGTACA 1 cut(s) 491
Bsp143I GATC 2 cut(s) 1130, 1246
BspACI CCGC 3 cut(s) 14, 95, 849
BspANI GGCC 4 cut(s) 116, 123, 432, 1561
BspCNI CTCAG 5 cut(s) 228, 799, 813, 1106, 1432
BspDI ATCGAT 1 cut(s) 142
BspFNI CGCG 1 cut(s) 629
BspLI GGNNCC 2 cut(s) 397, 1248
BspMAI CTGCAG 1 cut(s) 501
BspMI ACCTGC 3 cut(s) 58, 490, 1419
BspPI GGATC 3 cut(s) 1138, 1241, 1254
BspTNI GGTCTC 3 cut(s) 1436, 1483, 1537
BsrDI GCAATG 1 cut(s) 930
BsrGI TGTACA 1 cut(s) 491
BsrI ACTGG 6 cut(s) 77, 786, 1032, 1250, 1308, 1520
BssECI CCNNGG 2 cut(s) 685, 1015
BssMI GATC 2 cut(s) 1130, 1246
BssNAI GTATAC 1 cut(s) 1498
BssSI CACGAG 2 cut(s) 56, 441
BssT1I CCWWGG 2 cut(s) 685, 1015
Bst1107I GTATAC 1 cut(s) 1498
Bst2BI CACGAG 2 cut(s) 56, 441
Bst2UI CCWGG 3 cut(s) 400, 910, 1157
Bst4CI ACNGT 5 cut(s) 318, 487, 838, 1221, 1376
Bst6I CTCTTC 2 cut(s) 243, 1298
BstAPI GCANNNNNTGC 2 cut(s) 180, 716
BstAUI TGTACA 1 cut(s) 491
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 7 cut(s) 236, 414, 620, 807, 821, 1093, 1440
BstF5I GGATG 3 cut(s) 185, 753, 979
BstFNI CGCG 1 cut(s) 629
BstHHI GCGC 2 cut(s) 67, 629
BstKTI GATC 2 cut(s) 1133, 1249
BstMAI GTCTC 6 cut(s) 85, 438, 1201, 1436, 1483, 1537
BstMBI GATC 2 cut(s) 1130, 1246
BstMWI GCNNNNNNNGC 3 cut(s) 180, 429, 716
BstNI CCWGG 3 cut(s) 400, 910, 1157
BstNSI RCATGY 2 cut(s) 65, 917
BstSCI CCNGG 3 cut(s) 398, 908, 1155
BstSFI CTRYAG 3 cut(s) 456, 497, 1036
BstUI CGCG 1 cut(s) 629
BstV1I GCAGC 5 cut(s) 722, 1060, 1342, 1567, 1570
BstX2I RGATCY 1 cut(s) 1246
BstXI CCANNNNNNTGG 1 cut(s) 1483
BstYI RGATCY 1 cut(s) 1246
BstZ17I GTATAC 1 cut(s) 1498
Bsu15I ATCGAT 1 cut(s) 142
BsuRI GGCC 4 cut(s) 116, 123, 432, 1561
BsuTUI ATCGAT 1 cut(s) 142
BtrI CACGTC 1 cut(s) 1070
BtsCI GGATG 3 cut(s) 185, 753, 979
BtsI GCAGTG 2 cut(s) 494, 678
BtsIMutI CAGTG 6 cut(s) 492, 494, 678, 885, 1025, 1301
BveI ACCTGC 3 cut(s) 58, 490, 1419
Cac8I GCNNGC 1 cut(s) 63
CfoI GCGC 2 cut(s) 67, 629
Cfr13I GGNCC 1 cut(s) 1559
ClaI ATCGAT 1 cut(s) 142
CsiI ACCWGGT 1 cut(s) 1155
Csp6I GTAC 3 cut(s) 492, 1041, 1299
CviQI GTAC 3 cut(s) 492, 1041, 1299
DdeI CTNAG 7 cut(s) 236, 414, 620, 807, 821, 1093, 1440
DpnI GATC 2 cut(s) 1132, 1248
DpnII GATC 2 cut(s) 1130, 1246
DraI TTTAAA 1 cut(s) 1216
DriI GACNNNNNGTC 1 cut(s) 641
EaeI YGGCCR 2 cut(s) 114, 121
Eam1104I CTCTTC 2 cut(s) 243, 1298
Eam1105I GACNNNNNGTC 1 cut(s) 641
EarI CTCTTC 2 cut(s) 243, 1298
Eco130I CCWWGG 2 cut(s) 685, 1015
Eco31I GGTCTC 3 cut(s) 1436, 1483, 1537
Eco57I CTGAAG 1 cut(s) 1279
EcoRI GAATTC 1 cut(s) 828
EcoRII CCWGG 3 cut(s) 398, 908, 1155
EcoT14I CCWWGG 2 cut(s) 685, 1015
EcoT22I ATGCAT 2 cut(s) 185, 874
ErhI CCWWGG 2 cut(s) 685, 1015
FalI AAGNNNNNCTT 2 cut(s) 407, 439
FauI CCCGC 2 cut(s) 7, 842
FauNDI CATATG 2 cut(s) 715, 1166
FblI GTMKAC 1 cut(s) 1497
Fnu4HI GCNGC 5 cut(s) 711, 1074, 1356, 1581, 1584
FokI GGATG 3 cut(s) 192, 740, 986
Fsp4HI GCNGC 5 cut(s) 711, 1074, 1356, 1581, 1584
FspBI CTAG 3 cut(s) 539, 615, 1362
FspI TGCGCA 1 cut(s) 66
GlaI GCGC 2 cut(s) 66, 628
GluI GCNGC 5 cut(s) 711, 1074, 1356, 1581, 1584
GsaI CCCAGC 1 cut(s) 1179
GsuI CTGGAG 1 cut(s) 1537
HaeIII GGCC 4 cut(s) 116, 123, 432, 1561
HhaI GCGC 2 cut(s) 67, 629
Hin6I GCGC 2 cut(s) 65, 627
HinP1I GCGC 2 cut(s) 65, 627
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 6 cut(s) 155, 853, 900, 1022, 1382, 1433
HphI GGTGA 3 cut(s) 82, 367, 571
Hpy166II GTNNAC 6 cut(s) 151, 492, 494, 1224, 1301, 1498
Hpy188I TCNGA 8 cut(s) 179, 237, 327, 834, 1067, 1187, 1320, 1399
Hpy188III TCNNGA 5 cut(s) 56, 307, 512, 897, 980
Hpy8I GTNNAC 6 cut(s) 151, 492, 494, 1224, 1301, 1498
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 2 cut(s) 545, 735
HpyCH4III ACNGT 5 cut(s) 318, 487, 838, 1221, 1376
HpyCH4IV ACGT 1 cut(s) 1069
HpyF10VI GCNNNNNNNGC 3 cut(s) 180, 429, 716
HpyF3I CTNAG 7 cut(s) 236, 414, 620, 807, 821, 1093, 1440
HpySE526I ACGT 1 cut(s) 1069
HspAI GCGC 2 cut(s) 65, 627
Kzo9I GATC 2 cut(s) 1130, 1246
LmnI GCTCC 2 cut(s) 401, 1190
Lsp1109I GCAGC 5 cut(s) 722, 1060, 1342, 1567, 1570
LweI GCATC 7 cut(s) 170, 183, 556, 762, 964, 1041, 1522
MabI ACCWGGT 1 cut(s) 1155
MaeI CTAG 3 cut(s) 539, 615, 1362
MaeII ACGT 1 cut(s) 1069
MaeIII GTNAC 3 cut(s) 610, 883, 1237
MalI GATC 2 cut(s) 1132, 1248
MboI GATC 2 cut(s) 1130, 1246
MboII GAAGA 8 cut(s) 146, 260, 322, 497, 661, 1009, 1128, 1285
MflI RGATCY 1 cut(s) 1246
MluCI AATT 8 cut(s) 198, 465, 594, 690, 828, 1105, 1336, 1468
MlyI GAGTC 1 cut(s) 1391
MmeI TCCRAC 1 cut(s) 628
Mph1103I ATGCAT 2 cut(s) 185, 874
MroXI GAANNNNTTC 1 cut(s) 745
MseI TTAA 9 cut(s) 243, 335, 344, 723, 770, 1010, 1055, 1215, 1371
MslI CAYNNNNRTG 4 cut(s) 60, 344, 513, 1481
MspR9I CCNGG 3 cut(s) 400, 910, 1157
Mva1269I GAATGC 2 cut(s) 442, 745
MvaI CCWGG 3 cut(s) 400, 910, 1157
MvnI CGCG 1 cut(s) 629
MwoI GCNNNNNNNGC 3 cut(s) 180, 429, 716
NdeI CATATG 2 cut(s) 715, 1166
NdeII GATC 2 cut(s) 1130, 1246
NlaIV GGNNCC 2 cut(s) 397, 1248
NmuCI GTSAC 2 cut(s) 883, 1237
NsbI TGCGCA 1 cut(s) 66
NsiI ATGCAT 2 cut(s) 185, 874
NspI RCATGY 2 cut(s) 65, 917
PaeI GCATGC 1 cut(s) 65
PaqCI CACCTGC 1 cut(s) 58
PctI GAATGC 2 cut(s) 442, 745
PdmI GAANNNNTTC 1 cut(s) 745
PfeI GAWTC 5 cut(s) 155, 853, 900, 1022, 1433
PflMI CCANNNNNTGG 1 cut(s) 1553
PkrI GCNGC 5 cut(s) 712, 1075, 1357, 1582, 1585
PleI GAGTC 1 cut(s) 1390
PpsI GAGTC 1 cut(s) 1390
PshBI ATTAAT 1 cut(s) 1055
Psp6I CCWGG 3 cut(s) 398, 908, 1155
PspFI CCCAGC 1 cut(s) 1175
PspGI CCWGG 3 cut(s) 398, 908, 1155
PspN4I GGNNCC 2 cut(s) 397, 1248
PspPI GGNCC 1 cut(s) 1559
PstI CTGCAG 1 cut(s) 501
PsuI RGATCY 1 cut(s) 1246
RsaI GTAC 3 cut(s) 493, 1042, 1300
RsaNI GTAC 3 cut(s) 492, 1041, 1299
RseI CAYNNNNRTG 4 cut(s) 60, 344, 513, 1481
SaqAI TTAA 9 cut(s) 243, 335, 344, 723, 770, 1010, 1055, 1215, 1371
SatI GCNGC 5 cut(s) 711, 1074, 1356, 1581, 1584
Sau3AI GATC 2 cut(s) 1130, 1246
Sau96I GGNCC 1 cut(s) 1559
SchI GAGTC 1 cut(s) 1391
ScrFI CCNGG 3 cut(s) 400, 910, 1157
SexAI ACCWGGT 1 cut(s) 1155
SfaNI GCATC 7 cut(s) 170, 183, 556, 762, 964, 1041, 1522
SfcI CTRYAG 3 cut(s) 456, 497, 1036
SmiMI CAYNNNNRTG 4 cut(s) 60, 344, 513, 1481
SphI GCATGC 1 cut(s) 65
Sse9I AATT 8 cut(s) 198, 465, 594, 690, 828, 1105, 1336, 1468
SsiI CCGC 3 cut(s) 14, 95, 849
SspI AATATT 3 cut(s) 285, 1059, 1551
SspMI CTAG 3 cut(s) 539, 615, 1362
StyD4I CCNGG 3 cut(s) 398, 908, 1155
StyI CCWWGG 2 cut(s) 685, 1015
TaaI ACNGT 5 cut(s) 318, 487, 838, 1221, 1376
TaiI ACGT 1 cut(s) 1072
TaqI TCGA 2 cut(s) 142, 749
TaqII GACCGA 1 cut(s) 73
TasI AATT 8 cut(s) 198, 465, 594, 690, 828, 1105, 1336, 1468
TatI WGTACW 3 cut(s) 491, 1040, 1298
TfiI GAWTC 5 cut(s) 155, 853, 900, 1022, 1433
Tru1I TTAA 9 cut(s) 243, 335, 344, 723, 770, 1010, 1055, 1215, 1371
Tru9I TTAA 9 cut(s) 243, 335, 344, 723, 770, 1010, 1055, 1215, 1371
TscAI CASTG 6 cut(s) 492, 501, 685, 892, 1032, 1308
TseFI GTSAC 2 cut(s) 883, 1237
TseI GCWGC 5 cut(s) 710, 1073, 1355, 1580, 1583
Tsp45I GTSAC 2 cut(s) 883, 1237
TspGWI ACGGA 1 cut(s) 746
TspRI CASTG 6 cut(s) 492, 501, 685, 892, 1032, 1308
Van91I CCANNNNNTGG 1 cut(s) 1553
VspI ATTAAT 1 cut(s) 1055
XapI RAATTY 1 cut(s) 828
XceI RCATGY 2 cut(s) 65, 917
XmiI GTMKAC 1 cut(s) 1497
XmnI GAANNNNTTC 1 cut(s) 745
XspI CTAG 3 cut(s) 539, 615, 1362
Zsp2I ATGCAT 2 cut(s) 185, 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.