Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005056

Physical Location & Seq

Genomic Coordinates Reverse (-)

26366651 .. 26373733

Gene Structure 7083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1248200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGGCGGGCACGTCCAACGAAACCCCGAAATCACTCGCAGATTCGACTCTGGAATCGGAAGGAGCTATGAGCAAAAATGCACGGAAGAAGGAGTTGAAGAACAAGCAGCGGGAAGAGGAGAGGCGCCGAAAAGAGGAGGATAAGGCTGCTGCCTTGGCAAGCTCGCAAGTTAAGAAAGATGTAGCAACTGAAGATGACGACATGGATCCAACGCAATACTATGAAAATAGACTGAAGTATCTTGCTACCCAGAAGGCAGATAAAAATCCATATCCTCATAAATTCTTTTGTTCAATCACCGTACATGAATATGTAGAGAAGTATGCAAGCTTAAACGATGGGGAGCATCTTGAGGATATCACTGTTTCATTGGCTGGGCGAATCATGAGTAAAAGATCTTCCAGCTCTAAGCTCTTCTTTTATGACTTGGATGGTGGCGGACCTGATGGTGAGAAGGTCCAAGTCATGGCTGATTTAAGAAAATCAGAGTTGGATGAATCTGAATTTTCTAAGTTTCATTCTAGTGTTAAGCGTGGTGATATTGTCGGTGTGACTGGGTTTCCAGGAAAGACTAAGAGGGGGGAGCTGAGCATTTTCCCAAGATCATTTATAGTCTTATCACATTGTCTTCATATGATGCCAAGACAGAAAGCTGGTCCTGCTTCTGATAATGCTAATGTCAAGAAAACGAATCGATGGATCCCAGGAAGTCCCCGGAATCCTGAAGCATACATTTTAAAAGACCAGGAAACTCGCTATCGTCAACGTTATCTGGATCTAATATTGACTAATGAGGTTCGGCAAATATTCAGGACCAGATATAAAGTCATTCAATATATTAGAAGGTTCCTGGACAATCTGGACTTCTTGGAGGTCGAAACTCCTATGATGAATATGATTCCTGGTGGAGCGGCTGCCCGTCCTTTTATGACTTTTCACAATGAACTTGACATGAAGCTTTTCATGCGCGTTGCACCAGAACTCTATCTCAAGCAGCTTGTTGTTGGTGGCCTGGATCGTGTTTATGAGATTGGAAAGCAATTTAGAAATGAGGGCATTGATTTGACTCATAATCCTGAATTCACTACCTGTGAATTCTACATGGCTTATGCAGACTACAATGATTTGATGACGCTGACTGAGGAAATGTTGAGTGGTATGGTCAAGGAGCTAACTGGTGGGTATAAAATCAAGTATCATTCAAATGGGCTCGACAAGGAACCAATTGAGATTGACTTTACTCCTCCTTTCAGAAGGATCGACATGGTTGAGGAATTAAATAAGATTGCAGGTCTCAACATAAATCCAGAGAATCTCTCCAGTGCAGAAGCTAACCAATATCTTAAGGATGCGTGCAAGAAGTTTGATGTCAAATGTTCCCCTCCTGAAACAACAACTCGTTTGTTGGACAAGCTTGTTGGGCACTTTTTGGAAGAGACGTGTGTAAATCCCACTTTCATCATTAACCATCCTGAGATAATGAGTCCTTTGGCTAAGTGGCATCGATCGAAACCTGGCTTGACTGAACGTTTTGAATTGTTTGTGAACAAACATGAACTTGCCAATGCATACACAGAGTTGAATGATCCTGTGGTACAACGGGAAAGATTTGCTGATCAACTCAAGGACCGACAATCAGGTGATGATGAAGCAATGGCTTTGGACGAATCATTCTGTAGAGCTCTTGAGTACGGGTTACCTCCAACTGGTGGTTGGGGTTTGGGCGTTGATCGGCTCTGTATGTGGTTAACCGATTCACAAAATATCAAGGAAGTTCTACTCTTCCCGGCTATGAAGCCACAGGATGAGACTTGTGCTAAAGCCACTTTGGGTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0009506 GO:0016874 GO:0016875 GO:0030054 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0140098 GO:0140101

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2 tRNA_anti-codon

Protein Analysis

613

Amino Acids

69.94

Weight (kDa)

5.86

Isoelectric Point (pI)

46.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_anti-codon	PF01336	122 - 206	3.8e-11	OB-fold nucleic acid binding domain
tRNA-synt_2	PF00152	248 - 598	7.3e-95	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11710 AT3G30805
fragaria_vesca	FvH4_2g08732 FvH4_4g07860 FvH4_4g07860 FvH4_4g07860 FvH4_6g23270
malus_domestica	MD03G1170800.v1.1 MD13G1247500.v1.1 MD13G1247600.v1.1 MD13G1248200.v1.1 MD16G1255000.v1.1
prunus_persica	Prupe.1G082400_v2.0.a1 Prupe.1G082400_v2.0.a1 Prupe.1G083700_v2.0.a1
pyrus_communis	pycom03g12770 pycom13g21870 pycom13g21930 pycom16g21650
rosa_chinensis	RchiOBHm_Chr4g0401131
rosa_laevigata	RLG00000009161
rosa_multiflora	Rmu_sc0001909.1_g000026 Rmu_sc0037183.1_g000001
rosa_roxburghii	Rroxscaffold_5G00345980
rosa_rugosa	Rorug02G0525300 Rorug04G0028100
rosa_samantha	Rh2DG614600 Rh4BG100600 Rh4DG097900
rosa_wichuraiana	Rw4G008540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1280
AccB1I	GGYRCC	1 cut(s)	123
AccB7I	CCANNNNNTGG	2 cut(s)	466, 1709
AccBSI	CCGCTC	1 cut(s)	911
AccII	CGCG	1 cut(s)	969
AciI	CCGC	4 cut(s)	5, 109, 438, 911
AclI	AACGTT	2 cut(s)	766, 1528
AclWI	GGATC	8 cut(s)	200, 213, 694, 707, 783, 1023, 1265, 1580
AcsI	RAATTY	4 cut(s)	281, 503, 1079, 1094
AcuI	CTGAAG	3 cut(s)	210, 254, 744
AcyI	GRCGYC	1 cut(s)	124
AfaI	GTAC	3 cut(s)	303, 1596, 1691
AfiI	CCNNNNNNNGG	4 cut(s)	133, 466, 1706, 1709
AflII	CTTAAG	1 cut(s)	1343
AflIII	ACRYGT	1 cut(s)	1439
AgsI	TTSAA	6 cut(s)	97, 294, 833, 1203, 1535, 1582
AjiI	CACGTC	2 cut(s)	12, 1440
AjnI	CCWGG	7 cut(s)	562, 703, 744, 849, 901, 1011, 1513
Alw21I	GWGCWC	1 cut(s)	1684
Alw26I	GTCTC	3 cut(s)	1298, 1430, 1802
AlwI	GGATC	8 cut(s)	200, 213, 694, 707, 783, 1023, 1265, 1580
AoxI	GGCC	1 cut(s)	1009
ApeKI	GCWGC	5 cut(s)	106, 146, 149, 914, 994
ApoI	RAATTY	4 cut(s)	281, 503, 1079, 1094
Asp700I	GAANNNNTTC	1 cut(s)	959
AspLEI	GCGC	2 cut(s)	126, 969
AspS9I	GGNCC	5 cut(s)	440, 457, 656, 813, 1627
AsuC2I	CCSGG	2 cut(s)	715, 1787
AsuHPI	GGTGA	4 cut(s)	289, 461, 548, 1652
AvaII	GGWCC	5 cut(s)	440, 457, 656, 813, 1627
BaeGI	GKGCMC	2 cut(s)	11, 1425
BaeI	ACNNNNGTAYC	2 cut(s)	221, 254
BamHI	GGATCC	2 cut(s)	205, 699
BanI	GGYRCC	1 cut(s)	123
BanII	GRGCYC	2 cut(s)	1212, 1684
BarI	GAAGNNNNNNTAC	2 cut(s)	382, 414
BbsI	GAAGAC	1 cut(s)	620
Bbv12I	GWGCWC	1 cut(s)	1684
BbvI	GCAGC	5 cut(s)	118, 133, 136, 901, 1006
BccI	CCATC	5 cut(s)	332, 425, 440, 690, 1476
BciT130I	CCWGG	7 cut(s)	564, 705, 746, 851, 903, 1013, 1515
BclI	TGATCA	1 cut(s)	1615
BcnI	CCSGG	2 cut(s)	715, 1787
BcoDI	GTCTC	3 cut(s)	1298, 1430, 1802
BfaI	CTAG	1 cut(s)	522
BfmI	CTRYAG	1 cut(s)	1675
BfoI	RGCGCY	1 cut(s)	127
BfrI	CTTAAG	1 cut(s)	1343
BfuAI	ACCTGC	1 cut(s)	1280
BglII	AGATCT	1 cut(s)	395
BisI	GCNGC	6 cut(s)	107, 147, 150, 912, 915, 995
BlpI	GCTNAGC	1 cut(s)	587
BlsI	GCNGC	6 cut(s)	108, 148, 151, 913, 916, 996
Bme1390I	CCNGG	9 cut(s)	564, 705, 715, 746, 851, 903, 1013, 1515, 1787
Bme18I	GGWCC	5 cut(s)	440, 457, 656, 813, 1627
BmgBI	CACGTC	2 cut(s)	12, 1440
BmgT120I	GGNCC	5 cut(s)	440, 457, 656, 813, 1627
BmiI	GGNNCC	5 cut(s)	125, 207, 701, 848, 1221
BmrFI	CCNGG	9 cut(s)	564, 705, 715, 746, 851, 903, 1013, 1515, 1787
BmrI	ACTGGG	1 cut(s)	564
BmsI	GCATC	4 cut(s)	355, 627, 1339, 1510
BmuI	ACTGGG	1 cut(s)	564
BpiI	GAAGAC	1 cut(s)	620
BplI	GAGNNNNNCTC	2 cut(s)	1301, 1333
BpmI	CTGGAG	1 cut(s)	1303
Bpu1102I	GCTNAGC	1 cut(s)	587
BpuEI	CTTGAG	4 cut(s)	371, 974, 1607, 1706
BpuMI	CCSGG	2 cut(s)	715, 1787
Bsa29I	ATCGAT	2 cut(s)	694, 1504
BsaBI	GATNNNNATC	1 cut(s)	264
BsaHI	GRCGYC	1 cut(s)	124
BsaI	GGTCTC	1 cut(s)	1298
BsaJI	CCNNGG	3 cut(s)	153, 703, 713
Bsc4I	CCNNNNNNNGG	4 cut(s)	133, 466, 1706, 1709
Bse1I	ACTGG	4 cut(s)	559, 1180, 1320, 1711
Bse3DI	GCAATG	1 cut(s)	1659
Bse8I	GATNNNNATC	1 cut(s)	264
BseBI	CCWGG	7 cut(s)	564, 705, 746, 851, 903, 1013, 1515
BseCI	ATCGAT	2 cut(s)	694, 1504
BseDI	CCNNGG	3 cut(s)	153, 703, 713
BseGI	GGATG	5 cut(s)	436, 499, 1354, 1468, 1810
BseJI	GATNNNNATC	1 cut(s)	264
BseLI	CCNNNNNNNGG	4 cut(s)	133, 466, 1706, 1709
BseMI	GCAATG	1 cut(s)	1659
BseMII	CTCAG	3 cut(s)	578, 1131, 1464
BseNI	ACTGG	4 cut(s)	559, 1180, 1320, 1711
BseRI	GAGGAG	3 cut(s)	131, 149, 1233
BseSI	GKGCMC	2 cut(s)	11, 1425
BseXI	GCAGC	5 cut(s)	118, 133, 136, 901, 1006
BseYI	CCCAGC	1 cut(s)	374
BsgI	GTGCAG	1 cut(s)	1344
Bsh1236I	CGCG	1 cut(s)	969
Bsh1285I	CGRYCG	1 cut(s)	1508
BshFI	GGCC	1 cut(s)	1011
BshNI	GGYRCC	1 cut(s)	123
BshVI	ATCGAT	2 cut(s)	694, 1504
BsiEI	CGRYCG	1 cut(s)	1508
BsiHKAI	GWGCWC	1 cut(s)	1684
BsiSI	CCGG	2 cut(s)	715, 1787
BslFI	GGGAC	1 cut(s)	696
BslI	CCNNNNNNNGG	4 cut(s)	133, 466, 1706, 1709
BsmAI	GTCTC	3 cut(s)	1298, 1430, 1802
BsmBI	CGTCTC	1 cut(s)	1430
BsmFI	GGGAC	1 cut(s)	696
BsnI	GGCC	1 cut(s)	1011
Bso31I	GGTCTC	1 cut(s)	1298
Bsp1286I	GDGCHC	4 cut(s)	11, 1212, 1425, 1684
Bsp1720I	GCTNAGC	1 cut(s)	587
BspACI	CCGC	4 cut(s)	5, 109, 438, 911
BspANI	GGCC	1 cut(s)	1011
BspCNI	CTCAG	3 cut(s)	579, 1132, 1465
BspDI	ATCGAT	2 cut(s)	694, 1504
BspFNI	CGCG	1 cut(s)	969
BspHI	TCATGA	1 cut(s)	384
BspLI	GGNNCC	5 cut(s)	125, 207, 701, 848, 1221
BspMI	ACCTGC	1 cut(s)	1280
BspPI	GGATC	8 cut(s)	200, 213, 694, 707, 783, 1023, 1265, 1580
BspQI	GCTCTTC	1 cut(s)	419
BspT107I	GGYRCC	1 cut(s)	123
BspTI	CTTAAG	1 cut(s)	1343
BspTNI	GGTCTC	1 cut(s)	1298
BsrBI	CCGCTC	1 cut(s)	911
BsrDI	GCAATG	1 cut(s)	1659
BsrI	ACTGG	4 cut(s)	559, 1180, 1320, 1711
BssECI	CCNNGG	3 cut(s)	153, 703, 713
BssNI	GRCGYC	1 cut(s)	124
BssT1I	CCWWGG	1 cut(s)	153
Bst2UI	CCWGG	7 cut(s)	564, 705, 746, 851, 903, 1013, 1515
Bst4CI	ACNGT	2 cut(s)	301, 364
Bst6I	CTCTTC	4 cut(s)	108, 419, 1428, 1787
BstACI	GRCGYC	1 cut(s)	124
BstAFI	CTTAAG	1 cut(s)	1343
BstC8I	GCNNGC	5 cut(s)	7, 160, 164, 328, 1354
BstDEI	CTNAG	7 cut(s)	408, 510, 573, 587, 1140, 1473, 1494
BstEII	GGTNACC	1 cut(s)	1695
BstF5I	GGATG	5 cut(s)	436, 499, 1354, 1468, 1810
BstFNI	CGCG	1 cut(s)	969
BstH2I	RGCGCY	1 cut(s)	127
BstHHI	GCGC	2 cut(s)	126, 969
BstMAI	GTCTC	3 cut(s)	1298, 1430, 1802
BstMCI	CGRYCG	1 cut(s)	1508
BstMWI	GCNNNNNNNGC	4 cut(s)	155, 659, 964, 1420
BstNI	CCWGG	7 cut(s)	564, 705, 746, 851, 903, 1013, 1515
BstPI	GGTNACC	1 cut(s)	1695
BstSCI	CCNGG	9 cut(s)	562, 703, 713, 744, 849, 901, 1011, 1513, 1785
BstSFI	CTRYAG	1 cut(s)	1675
BstSLI	GKGCMC	2 cut(s)	11, 1425
BstUI	CGCG	1 cut(s)	969
BstV1I	GCAGC	5 cut(s)	118, 133, 136, 901, 1006
BstV2I	GAAGAC	1 cut(s)	620
BstX2I	RGATCY	4 cut(s)	205, 395, 699, 775
BstYI	RGATCY	4 cut(s)	205, 395, 699, 775
Bsu15I	ATCGAT	2 cut(s)	694, 1504
BsuRI	GGCC	1 cut(s)	1011
BsuTUI	ATCGAT	2 cut(s)	694, 1504
BtrI	CACGTC	2 cut(s)	12, 1440
BtsCI	GGATG	5 cut(s)	436, 499, 1354, 1468, 1810
BtsIMutI	CAGTG	2 cut(s)	360, 1327
BveI	ACCTGC	1 cut(s)	1280
Cac8I	GCNNGC	5 cut(s)	7, 160, 164, 328, 1354
CciI	TCATGA	1 cut(s)	384
CfoI	GCGC	2 cut(s)	126, 969
Cfr13I	GGNCC	5 cut(s)	440, 457, 656, 813, 1627
ClaI	ATCGAT	2 cut(s)	694, 1504
CseI	GACGC	1 cut(s)	1141
Csp6I	GTAC	3 cut(s)	302, 1595, 1690
CviAII	CATG	9 cut(s)	202, 305, 385, 466, 952, 964, 1102, 1264, 1553
CviQI	GTAC	3 cut(s)	302, 1595, 1690
DdeI	CTNAG	7 cut(s)	408, 510, 573, 587, 1140, 1473, 1494
DinI	GGCGCC	1 cut(s)	125
DraI	TTTAAA	1 cut(s)	738
Eam1104I	CTCTTC	4 cut(s)	108, 419, 1428, 1787
EarI	CTCTTC	4 cut(s)	108, 419, 1428, 1787
EciI	GGCGGA	1 cut(s)	453
Ecl136II	GAGCTC	1 cut(s)	1682
Eco130I	CCWWGG	1 cut(s)	153
Eco24I	GRGCYC	2 cut(s)	1212, 1684
Eco31I	GGTCTC	1 cut(s)	1298
Eco32I	GATATC	1 cut(s)	358
Eco47I	GGWCC	5 cut(s)	440, 457, 656, 813, 1627
Eco53kI	GAGCTC	1 cut(s)	1682
Eco57I	CTGAAG	3 cut(s)	210, 254, 744
Eco91I	GGTNACC	1 cut(s)	1695
EcoICRI	GAGCTC	1 cut(s)	1682
EcoO65I	GGTNACC	1 cut(s)	1695
EcoRI	GAATTC	2 cut(s)	1079, 1094
EcoRII	CCWGG	7 cut(s)	562, 703, 744, 849, 901, 1011, 1513
EcoRV	GATATC	1 cut(s)	358
EcoT14I	CCWWGG	1 cut(s)	153
EcoT22I	ATGCAT	1 cut(s)	1570
EcoT38I	GRGCYC	2 cut(s)	1212, 1684
EgeI	GGCGCC	1 cut(s)	125
EheI	GGCGCC	1 cut(s)	125
ErhI	CCWWGG	1 cut(s)	153
Esp3I	CGTCTC	1 cut(s)	1430
FaeI	CATG	9 cut(s)	205, 308, 388, 469, 955, 967, 1105, 1267, 1556
FalI	AAGNNNNNCTT	2 cut(s)	401, 433
FaqI	GGGAC	1 cut(s)	696
FatI	CATG	9 cut(s)	201, 304, 384, 465, 951, 963, 1101, 1263, 1552
FauI	CCCGC	1 cut(s)	102
FauNDI	CATATG	1 cut(s)	633
FbaI	TGATCA	1 cut(s)	1615
Fnu4HI	GCNGC	6 cut(s)	107, 147, 150, 912, 915, 995
FokI	GGATG	5 cut(s)	443, 506, 1361, 1455, 1817
FriOI	GRGCYC	2 cut(s)	1212, 1684
Fsp4HI	GCNGC	6 cut(s)	107, 147, 150, 912, 915, 995
FspBI	CTAG	1 cut(s)	522
GlaI	GCGC	2 cut(s)	125, 968
GluI	GCNGC	6 cut(s)	107, 147, 150, 912, 915, 995
GsaI	CCCAGC	1 cut(s)	378
GsuI	CTGGAG	1 cut(s)	1303
HaeII	RGCGCY	1 cut(s)	127
HaeIII	GGCC	1 cut(s)	1011
HapII	CCGG	2 cut(s)	715, 1787
HgaI	GACGC	1 cut(s)	1141
HhaI	GCGC	2 cut(s)	126, 969
Hin1I	GRCGYC	1 cut(s)	124
Hin1II	CATG	9 cut(s)	205, 308, 388, 469, 955, 967, 1105, 1267, 1556
Hin6I	GCGC	2 cut(s)	124, 967
HinP1I	GCGC	2 cut(s)	124, 967
HincII	GTYRAC	2 cut(s)	764, 1749
HindII	GTYRAC	2 cut(s)	764, 1749
HindIII	AAGCTT	3 cut(s)	328, 956, 1412
HpaI	GTTAAC	1 cut(s)	1749
HpaII	CCGG	2 cut(s)	715, 1787
HphI	GGTGA	4 cut(s)	289, 461, 548, 1652
Hpy166II	GTNNAC	3 cut(s)	764, 1546, 1749
Hpy188I	TCNGA	5 cut(s)	58, 487, 502, 667, 1253
Hpy8I	GTNNAC	3 cut(s)	764, 1546, 1749
HpyAV	CCTTC	6 cut(s)	53, 82, 247, 448, 837, 1248
HpyCH4III	ACNGT	2 cut(s)	301, 364
HpyCH4IV	ACGT	4 cut(s)	11, 766, 1439, 1528
HpyCH4V	TGCA	8 cut(s)	80, 326, 974, 1112, 1289, 1325, 1356, 1568
HpyF10VI	GCNNNNNNNGC	4 cut(s)	155, 659, 964, 1420
HpyF3I	CTNAG	7 cut(s)	408, 510, 573, 587, 1140, 1473, 1494
HpySE526I	ACGT	4 cut(s)	11, 766, 1439, 1528
Hsp92I	GRCGYC	1 cut(s)	124
Hsp92II	CATG	9 cut(s)	205, 308, 388, 469, 955, 967, 1105, 1267, 1556
HspAI	GCGC	2 cut(s)	124, 967
KasI	GGCGCC	1 cut(s)	123
Ksp22I	TGATCA	1 cut(s)	1615
KspAI	GTTAAC	1 cut(s)	1749
LguI	GCTCTTC	1 cut(s)	419
LmnI	GCTCC	5 cut(s)	62, 343, 583, 908, 1168
Lsp1109I	GCAGC	5 cut(s)	118, 133, 136, 901, 1006
LweI	GCATC	4 cut(s)	355, 627, 1339, 1510
MaeI	CTAG	1 cut(s)	522
MaeII	ACGT	4 cut(s)	11, 766, 1439, 1528
MaeIII	GTNAC	2 cut(s)	550, 1695
MbiI	CCGCTC	1 cut(s)	911
MboII	GAAGA	9 cut(s)	97, 109, 125, 203, 390, 406, 620, 1445, 1774
MfeI	CAATTG	1 cut(s)	1224
MflI	RGATCY	4 cut(s)	205, 395, 699, 775
MhlI	GDGCHC	4 cut(s)	11, 1212, 1425, 1684
MluCI	AATT	8 cut(s)	281, 503, 1040, 1079, 1094, 1224, 1274, 1535
Mly113I	GGCGCC	1 cut(s)	124
MlyI	GAGTC	3 cut(s)	40, 1060, 1492
MmeI	TCCRAC	5 cut(s)	39, 233, 471, 1386, 1727
Mph1103I	ATGCAT	1 cut(s)	1570
MroXI	GAANNNNTTC	1 cut(s)	959
MseI	TTAA	9 cut(s)	171, 332, 476, 528, 737, 1277, 1344, 1464, 1748
MslI	CAYNNNNRTG	3 cut(s)	309, 522, 1203
MspA1I	CMGCKG	1 cut(s)	109
MspCI	CTTAAG	1 cut(s)	1343
MspI	CCGG	2 cut(s)	715, 1787
MspR9I	CCNGG	9 cut(s)	564, 705, 715, 746, 851, 903, 1013, 1515, 1787
MunI	CAATTG	1 cut(s)	1224
MvaI	CCWGG	7 cut(s)	564, 705, 746, 851, 903, 1013, 1515
MvnI	CGCG	1 cut(s)	969
MwoI	GCNNNNNNNGC	4 cut(s)	155, 659, 964, 1420
NarI	GGCGCC	1 cut(s)	124
NciI	CCSGG	2 cut(s)	715, 1787
NdeI	CATATG	1 cut(s)	633
NlaIII	CATG	9 cut(s)	205, 308, 388, 469, 955, 967, 1105, 1267, 1556
NlaIV	GGNNCC	5 cut(s)	125, 207, 701, 848, 1221
NmuCI	GTSAC	1 cut(s)	550
NsiI	ATGCAT	1 cut(s)	1570
PagI	TCATGA	1 cut(s)	384
PciSI	GCTCTTC	1 cut(s)	419
PdmI	GAANNNNTTC	1 cut(s)	959
PflMI	CCANNNNNTGG	2 cut(s)	466, 1709
PfoI	TCCNGGA	2 cut(s)	562, 849
PkrI	GCNGC	6 cut(s)	108, 148, 151, 913, 916, 996
Ple19I	CGATCG	1 cut(s)	1508
PleI	GAGTC	3 cut(s)	40, 1060, 1491
PluTI	GGCGCC	1 cut(s)	127
PpsI	GAGTC	3 cut(s)	40, 1060, 1491
Psp124BI	GAGCTC	1 cut(s)	1684
Psp1406I	AACGTT	2 cut(s)	766, 1528
Psp6I	CCWGG	7 cut(s)	562, 703, 744, 849, 901, 1011, 1513
PspEI	GGTNACC	1 cut(s)	1695
PspFI	CCCAGC	1 cut(s)	374
PspGI	CCWGG	7 cut(s)	562, 703, 744, 849, 901, 1011, 1513
PspN4I	GGNNCC	5 cut(s)	125, 207, 701, 848, 1221
PspPI	GGNCC	5 cut(s)	440, 457, 656, 813, 1627
PsuI	RGATCY	4 cut(s)	205, 395, 699, 775
PvuI	CGATCG	1 cut(s)	1508
RsaI	GTAC	3 cut(s)	303, 1596, 1691
RsaNI	GTAC	3 cut(s)	302, 1595, 1690
RseI	CAYNNNNRTG	3 cut(s)	309, 522, 1203
SacI	GAGCTC	1 cut(s)	1684
SapI	GCTCTTC	1 cut(s)	419
SaqAI	TTAA	9 cut(s)	171, 332, 476, 528, 737, 1277, 1344, 1464, 1748
SatI	GCNGC	6 cut(s)	107, 147, 150, 912, 915, 995
Sau96I	GGNCC	5 cut(s)	440, 457, 656, 813, 1627
SchI	GAGTC	3 cut(s)	40, 1060, 1492
ScrFI	CCNGG	9 cut(s)	564, 705, 715, 746, 851, 903, 1013, 1515, 1787
SduI	GDGCHC	4 cut(s)	11, 1212, 1425, 1684
SfaNI	GCATC	4 cut(s)	355, 627, 1339, 1510
SfcI	CTRYAG	1 cut(s)	1675
SfoI	GGCGCC	1 cut(s)	125
SinI	GGWCC	5 cut(s)	440, 457, 656, 813, 1627
SmiMI	CAYNNNNRTG	3 cut(s)	309, 522, 1203
SmlI	CTYRAG	5 cut(s)	350, 989, 1343, 1622, 1685
SmoI	CTYRAG	5 cut(s)	350, 989, 1343, 1622, 1685
Sse9I	AATT	8 cut(s)	281, 503, 1040, 1079, 1094, 1224, 1274, 1535
SsiI	CCGC	4 cut(s)	5, 109, 438, 911
SspDI	GGCGCC	1 cut(s)	123
SspI	AATATT	2 cut(s)	783, 807
SspMI	CTAG	1 cut(s)	522
SstI	GAGCTC	1 cut(s)	1684
StyD4I	CCNGG	9 cut(s)	562, 703, 713, 744, 849, 901, 1011, 1513, 1785
StyI	CCWWGG	1 cut(s)	153
TaaI	ACNGT	2 cut(s)	301, 364
TaiI	ACGT	4 cut(s)	14, 769, 1442, 1531
TaqI	TCGA	7 cut(s)	44, 694, 876, 1212, 1260, 1504, 1508
TaqII	GACCGA	1 cut(s)	1644
TasI	AATT	8 cut(s)	281, 503, 1040, 1079, 1094, 1224, 1274, 1535
TauI	GCSGC	1 cut(s)	914
Tru1I	TTAA	9 cut(s)	171, 332, 476, 528, 737, 1277, 1344, 1464, 1748
Tru9I	TTAA	9 cut(s)	171, 332, 476, 528, 737, 1277, 1344, 1464, 1748
TscAI	CASTG	2 cut(s)	367, 1327
TseFI	GTSAC	1 cut(s)	550
TseI	GCWGC	5 cut(s)	106, 146, 149, 914, 994
Tsp45I	GTSAC	1 cut(s)	550
TspGWI	ACGGA	1 cut(s)	97
TspRI	CASTG	2 cut(s)	367, 1327
Van91I	CCANNNNNTGG	2 cut(s)	466, 1709
Vha464I	CTTAAG	1 cut(s)	1343
VpaK11BI	GGWCC	5 cut(s)	440, 457, 656, 813, 1627
XapI	RAATTY	4 cut(s)	281, 503, 1079, 1094
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1710
XmnI	GAANNNNTTC	1 cut(s)	959
XspI	CTAG	1 cut(s)	522
Zsp2I	ATGCAT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.