MD14G1062300.v1.1
BZIP Family

Transcription factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
6630729 .. 6637798
7070 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1062300.v1.1.491

Sequence Viewer

Length: 1626 bp
ATGGGGTTTTCAAGAGGTTTTGATTTTGGAGGACGCGGAGGACAAGAAGAGGAAAATAAAAGAGATCACCAACTCTTAGAAACAAAGCTCTTACCTTCTTCTGCAAGACCTACTTCATCTTCTTCTTTTCTCATGGCTTCAAGTATTCAAGGAAACAGCAATCAACTTGAACACCAACAACAACATCATCATCAAATACAAGATCAGCATCATCACCATCATCAGCAGCAACAGCAGCAGATTCAATATGGGATGATGCAATCATCATCAGCCAATATTCCTGCTGGGAACTTCATATCAAACAAAGACGGTGGAGCTGCTTATGATTTGGGGGAATTAGATCAAGCTCTTTTTCTCTACCTTGATGGACAGTCGCAGGACCATCACAACCCTTCAGCTAATCATGTTCACCATCAAGACCAACGACATCTTCATCAAAATAATTCGTCATCTGGAATGAGGCCTCCAACTTTGAATATTTTCCCATCTCAGCCGATGCATGTAGAGCCATCATCATCAACCAAAGCAGCTGGAACGGGATTGGTTTCTCCTTCAAGTAGTGGTTCAAAGAGACCATCAGAACCGTCCATGGAGTTGGCCAACGCACGCAATGATTCTACTGCCCCTCCTCCTCCTTCTGGACCTTCTCACGAACCTGCCAAAGCTATCAAGCGTGAGGGTAACCGCAAGGGACCAACTACATCAAGTTCAGAGCAAGAAGGACCCAAAACACCAGACCCTAAGACTTTGAGAAGGCTTGCTCAGAATAGAGAAGCAGCCAGGAAAAGCAGGCTTAGAAAAAAGGCATATGTGCAGCAGTTAGAGACAAGTAGGATTAAGCTAACTCAACTGGAACAAGAGCTGCAAAGAGCCAGATCTCAAGGCATGTTCTTTGGAGGAGGACTTGTAGGAGGAGAGCAACAAAGCCTTCCTGTTGGTATCAACAACACTAGCTCAGACGCTGCCGTTTTTGACATGGAGTATGCAAGGTGGCTGGAGGAGCACCACCGTCTCATGTGTGAGCTTCGAGCTGCAGTACAAGAGCATTTGCCGGAGAATGAACTGCGACTTTATGTGGACAACTGCTTGGCACATTATGATGAAGTGTTGAACCTCAAAGGCATGGTTGCCAAGACTGATGTGTTTCACATTGTTTCTGGTATGTGGAAGACTCCGGCTGAACGTTGCTTCATGTGGATGGGTGGATTTCGGCCCTCTGAGGTCATCAAGATTATTCTGAATCAAATCGAGCCTTTAACGGAGCAGCAACTATTGGGTATTTGTGGGTTACAACAATCCACACAGGAGACTGAAGAAGCTCTCTCTCAAGGTCTTGAAGCTCTCAATCAGTCTCTCTCAGAGACCATAACCTCTGATTCATTGAGCTGCCCTCCCAACATGGCCAACTACATGGGACAGATGGCTATAGCCATGAACAAGCTCTCCACCCTCGAGGGCTTTGTTAGACAGGCTGATAATCTGAGGCAGCAGACAATTTACCGGCTTCAACAAATTCTGACGACCCGTCAAGCAGCGAGGTGTTTGCTGGCAATCGCTGAGTACTTCCATCGTCTCCGAGCTCTCAGCTCTCTCTGGATGGGTCGTCCTCGACAAGATCAGTCATAA

Protein Analysis

542

Amino Acids

60.43

Weight (kDa)

6.81

Isoelectric Point (pI)

69.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 245 - 289 3.8e-07 Basic region leucine zipper
bZIP_1 PF00170 248 - 288 4.2e-08 bZIP transcription factor
DOG1 PF14144 339 - 413 2.5e-31 Seed dormancy control
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1451
Acc36I ACCTGC 1 cut(s) 664
AccII CGCG 1 cut(s) 36
AciI CCGC 2 cut(s) 36, 685
AclI AACGTT 1 cut(s) 1183
AcoI YGGCCR 2 cut(s) 597, 1401
AcsI RAATTY 1 cut(s) 1512
AcuI CTGAAG 2 cut(s) 378, 1332
AfaI GTAC 2 cut(s) 1038, 1562
AfiI CCNNNNNNNGG 1 cut(s) 638
AhdI GACNNNNNGTC 1 cut(s) 1524
AjnI CCWGG 1 cut(s) 779
AjuI GAANNNNNNNTTGG 2 cut(s) 414, 446
AloI GAACNNNNNNTCC 2 cut(s) 1427, 1459
Alw21I GWGCWC 2 cut(s) 1005, 1582
Alw26I GTCTC 7 cut(s) 565, 818, 1016, 1301, 1355, 1356, 1577
AlwNI CAGNNNCTG 1 cut(s) 962
Ama87I CYCGRG 1 cut(s) 1451
AoxI GGCC 4 cut(s) 461, 597, 1211, 1401
ApoI RAATTY 1 cut(s) 1512
Asp700I GAANNNNTTC 1 cut(s) 479
AspS9I GGNCC 5 cut(s) 379, 641, 692, 722, 1212
AsuHPI GGTGA 3 cut(s) 59, 206, 401
AvaI CYCGRG 1 cut(s) 1451
AvaII GGWCC 4 cut(s) 379, 641, 692, 722
BalI TGGCCA 2 cut(s) 599, 1403
BanII GRGCYC 1 cut(s) 1582
BbsI GAAGAC 1 cut(s) 1175
Bbv12I GWGCWC 2 cut(s) 1005, 1582
BceAI ACGGC 1 cut(s) 950
BcgI CGANNNNNNTGC 2 cut(s) 1525, 1559
BciT130I CCWGG 1 cut(s) 781
BcoDI GTCTC 7 cut(s) 565, 818, 1016, 1301, 1355, 1356, 1577
BfaI CTAG 1 cut(s) 951
BfmI CTRYAG 2 cut(s) 1032, 1425
BfuAI ACCTGC 1 cut(s) 664
BglII AGATCT 1 cut(s) 875
BmcAI AGTACT 1 cut(s) 1562
Bme1390I CCNGG 1 cut(s) 781
Bme18I GGWCC 4 cut(s) 379, 641, 692, 722
BmeRI GACNNNNNGTC 1 cut(s) 1524
BmeT110I CYCGRG 1 cut(s) 1451
BmgT120I GGNCC 5 cut(s) 379, 641, 692, 722, 1212
BmiI GGNNCC 2 cut(s) 693, 724
BmrFI CCNGG 1 cut(s) 781
BmsI GCATC 3 cut(s) 217, 246, 486
BpiI GAAGAC 1 cut(s) 1175
BplI GAGNNNNNCTC 2 cut(s) 1375, 1407
BpmI CTGGAG 1 cut(s) 1016
BpuEI CTTGAG 2 cut(s) 864, 1311
BsaBI GATNNNNATC 1 cut(s) 207
BsaI GGTCTC 2 cut(s) 565, 1355
BsaJI CCNNGG 1 cut(s) 588
BsaXI ACNNNNNCTCC 6 cut(s) 610, 640, 891, 921, 1427, 1457
Bsc4I CCNNNNNNNGG 1 cut(s) 638
Bse118I RCCGGY 1 cut(s) 1500
Bse1I ACTGG 1 cut(s) 855
Bse3DI GCAATG 1 cut(s) 616
Bse8I GATNNNNATC 1 cut(s) 207
BseBI CCWGG 1 cut(s) 781
BseDI CCNNGG 1 cut(s) 588
BseGI GGATG 3 cut(s) 258, 1203, 1602
BseJI GATNNNNATC 1 cut(s) 207
BseLI CCNNNNNNNGG 1 cut(s) 638
BseMI GCAATG 1 cut(s) 616
BseMII CTCAG 8 cut(s) 503, 776, 969, 1209, 1371, 1472, 1548, 1597
BseNI ACTGG 1 cut(s) 855
BseRI GAGGAG 5 cut(s) 618, 621, 912, 927, 1013
BseYI CCCAGC 1 cut(s) 284
BsgI GTGCAG 1 cut(s) 833
Bsh1236I CGCG 1 cut(s) 36
BshFI GGCC 4 cut(s) 463, 599, 1213, 1403
BsiHKAI GWGCWC 2 cut(s) 1005, 1582
BsiHKCI CYCGRG 1 cut(s) 1451
BsiSI CCGG 3 cut(s) 1052, 1175, 1501
BslFI GGGAC 2 cut(s) 705, 1428
BslI CCNNNNNNNGG 1 cut(s) 638
BsmAI GTCTC 7 cut(s) 565, 818, 1016, 1301, 1355, 1356, 1577
BsmBI CGTCTC 2 cut(s) 1016, 1577
BsmFI GGGAC 2 cut(s) 705, 1428
BsnI GGCC 4 cut(s) 463, 599, 1213, 1403
Bso31I GGTCTC 2 cut(s) 565, 1355
BsoBI CYCGRG 1 cut(s) 1451
Bsp1286I GDGCHC 2 cut(s) 1005, 1582
Bsp143I GATC 5 cut(s) 64, 202, 340, 875, 1615
Bsp19I CCATGG 1 cut(s) 588
BspACI CCGC 2 cut(s) 36, 685
BspANI GGCC 4 cut(s) 463, 599, 1213, 1403
BspCNI CTCAG 8 cut(s) 502, 775, 968, 1210, 1370, 1473, 1549, 1596
BspFNI CGCG 1 cut(s) 36
BspLI GGNNCC 2 cut(s) 693, 724
BspMAI CTGCAG 1 cut(s) 1036
BspMI ACCTGC 1 cut(s) 664
BspTNI GGTCTC 2 cut(s) 565, 1355
BsrDI GCAATG 1 cut(s) 616
BsrFI RCCGGY 1 cut(s) 1500
BsrI ACTGG 1 cut(s) 855
BssAI RCCGGY 1 cut(s) 1500
BssECI CCNNGG 1 cut(s) 588
BssMI GATC 5 cut(s) 64, 202, 340, 875, 1615
BssT1I CCWWGG 1 cut(s) 588
Bst2UI CCWGG 1 cut(s) 781
Bst4CI ACNGT 4 cut(s) 311, 372, 585, 1010
Bst6I CTCTTC 1 cut(s) 42
BstC8I GCNNGC 4 cut(s) 607, 759, 791, 1548
BstDSI CCRYGG 1 cut(s) 588
BstEII GGTNACC 1 cut(s) 680
BstF5I GGATG 3 cut(s) 258, 1203, 1602
BstFNI CGCG 1 cut(s) 36
BstKTI GATC 5 cut(s) 67, 205, 343, 878, 1618
BstMAI GTCTC 7 cut(s) 565, 818, 1016, 1301, 1355, 1356, 1577
BstMBI GATC 5 cut(s) 64, 202, 340, 875, 1615
BstMWI GCNNNNNNNGC 4 cut(s) 232, 235, 505, 1000
BstNI CCWGG 1 cut(s) 781
BstNSI RCATGY 2 cut(s) 503, 889
BstPI GGTNACC 1 cut(s) 680
BstSCI CCNGG 1 cut(s) 779
BstSFI CTRYAG 2 cut(s) 1032, 1425
BstUI CGCG 1 cut(s) 36
BstV2I GAAGAC 1 cut(s) 1175
BstX2I RGATCY 1 cut(s) 875
BstXI CCANNNNNNTGG 2 cut(s) 595, 1411
BstYI RGATCY 1 cut(s) 875
BsuRI GGCC 4 cut(s) 463, 599, 1213, 1403
BtgI CCRYGG 1 cut(s) 588
BtsCI GGATG 3 cut(s) 258, 1203, 1602
BveI ACCTGC 1 cut(s) 664
Cac8I GCNNGC 4 cut(s) 607, 759, 791, 1548
CaiI CAGNNNCTG 1 cut(s) 962
Cfr10I RCCGGY 1 cut(s) 1500
Cfr13I GGNCC 5 cut(s) 379, 641, 692, 722, 1212
CseI GACGC 2 cut(s) 42, 968
Csp6I GTAC 2 cut(s) 1037, 1561
CspCI CAANNNNNGTGG 2 cut(s) 292, 327
CviQI GTAC 2 cut(s) 1037, 1561
DpnI GATC 5 cut(s) 66, 204, 342, 877, 1617
DpnII GATC 5 cut(s) 64, 202, 340, 875, 1615
DriI GACNNNNNGTC 1 cut(s) 1524
EaeI YGGCCR 2 cut(s) 597, 1401
Eam1104I CTCTTC 1 cut(s) 42
Eam1105I GACNNNNNGTC 1 cut(s) 1524
EarI CTCTTC 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 1580
Eco130I CCWWGG 1 cut(s) 588
Eco147I AGGCCT 1 cut(s) 463
Eco24I GRGCYC 1 cut(s) 1582
Eco31I GGTCTC 2 cut(s) 565, 1355
Eco47I GGWCC 4 cut(s) 379, 641, 692, 722
Eco53kI GAGCTC 1 cut(s) 1580
Eco57I CTGAAG 2 cut(s) 378, 1332
Eco88I CYCGRG 1 cut(s) 1451
Eco91I GGTNACC 1 cut(s) 680
EcoICRI GAGCTC 1 cut(s) 1580
EcoO109I RGGNCCY 1 cut(s) 722
EcoO65I GGTNACC 1 cut(s) 680
EcoRII CCWGG 1 cut(s) 779
EcoT14I CCWWGG 1 cut(s) 588
EcoT22I ATGCAT 1 cut(s) 501
EcoT38I GRGCYC 1 cut(s) 1582
ErhI CCWWGG 1 cut(s) 588
Esp3I CGTCTC 2 cut(s) 1016, 1577
FalI AAGNNNNNCTT 2 cut(s) 97, 129
FaqI GGGAC 2 cut(s) 705, 1428
FauNDI CATATG 1 cut(s) 808
FokI GGATG 3 cut(s) 265, 1210, 1609
FriOI GRGCYC 1 cut(s) 1582
FspBI CTAG 1 cut(s) 951
GsaI CCCAGC 1 cut(s) 288
GsuI CTGGAG 1 cut(s) 1016
HaeIII GGCC 4 cut(s) 463, 599, 1213, 1403
HapII CCGG 3 cut(s) 1052, 1175, 1501
HgaI GACGC 2 cut(s) 42, 968
HinfI GANTC 5 cut(s) 241, 614, 1171, 1240, 1376
HpaII CCGG 3 cut(s) 1052, 1175, 1501
HphI GGTGA 3 cut(s) 59, 206, 401
Hpy166II GTNNAC 2 cut(s) 409, 1078
Hpy188III TCNNGA 8 cut(s) 12, 416, 453, 639, 650, 1228, 1334, 1594
Hpy8I GTNNAC 2 cut(s) 409, 1078
HpyAV CCTTC 8 cut(s) 105, 402, 561, 645, 654, 713, 747, 938
HpyCH4III ACNGT 4 cut(s) 311, 372, 585, 1010
HpyCH4IV ACGT 1 cut(s) 1183
HpyCH4V TGCA 7 cut(s) 104, 259, 499, 814, 865, 986, 1034
HpyF10VI GCNNNNNNNGC 4 cut(s) 232, 235, 505, 1000
HpySE526I ACGT 1 cut(s) 1183
Kzo9I GATC 5 cut(s) 64, 202, 340, 875, 1615
LmnI GCTCC 3 cut(s) 314, 1000, 1261
LweI GCATC 3 cut(s) 217, 246, 486
MaeI CTAG 1 cut(s) 951
MaeII ACGT 1 cut(s) 1183
MaeIII GTNAC 2 cut(s) 680, 1287
MalI GATC 5 cut(s) 66, 204, 342, 877, 1617
MboI GATC 5 cut(s) 64, 202, 340, 875, 1615
MboII GAAGA 7 cut(s) 59, 90, 111, 114, 422, 1180, 1325
MflI RGATCY 1 cut(s) 875
MhlI GDGCHC 2 cut(s) 1005, 1582
MlsI TGGCCA 2 cut(s) 599, 1403
MluCI AATT 4 cut(s) 335, 442, 1494, 1512
MluNI TGGCCA 2 cut(s) 599, 1403
MlyI GAGTC 1 cut(s) 1165
MmeI TCCRAC 1 cut(s) 491
Mox20I TGGCCA 2 cut(s) 599, 1403
Mph1103I ATGCAT 1 cut(s) 501
MroXI GAANNNNTTC 1 cut(s) 479
MscI TGGCCA 2 cut(s) 599, 1403
MseI TTAA 2 cut(s) 837, 1256
MslI CAYNNNNRTG 2 cut(s) 1098, 1196
Msp20I TGGCCA 2 cut(s) 599, 1403
MspA1I CMGCKG 1 cut(s) 530
MspI CCGG 3 cut(s) 1052, 1175, 1501
MspR9I CCNGG 1 cut(s) 781
MvaI CCWGG 1 cut(s) 781
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 4 cut(s) 232, 235, 505, 1000
NcoI CCATGG 1 cut(s) 588
NdeI CATATG 1 cut(s) 808
NdeII GATC 5 cut(s) 64, 202, 340, 875, 1615
NlaIV GGNNCC 2 cut(s) 693, 724
NsiI ATGCAT 1 cut(s) 501
NspI RCATGY 2 cut(s) 503, 889
PaeR7I CTCGAG 1 cut(s) 1451
PceI AGGCCT 1 cut(s) 463
PdmI GAANNNNTTC 1 cut(s) 479
PfeI GAWTC 4 cut(s) 241, 614, 1240, 1376
PleI GAGTC 1 cut(s) 1165
PpsI GAGTC 1 cut(s) 1165
PpuMI RGGWCCY 1 cut(s) 722
Psp124BI GAGCTC 1 cut(s) 1582
Psp1406I AACGTT 1 cut(s) 1183
Psp5II RGGWCCY 1 cut(s) 722
Psp6I CCWGG 1 cut(s) 779
PspEI GGTNACC 1 cut(s) 680
PspFI CCCAGC 1 cut(s) 284
PspGI CCWGG 1 cut(s) 779
PspN4I GGNNCC 2 cut(s) 693, 724
PspPI GGNCC 5 cut(s) 379, 641, 692, 722, 1212
PspPPI RGGWCCY 1 cut(s) 722
PspXI VCTCGAGB 1 cut(s) 1451
PstI CTGCAG 1 cut(s) 1036
PstNI CAGNNNCTG 1 cut(s) 962
PsuI RGATCY 1 cut(s) 875
PvuII CAGCTG 1 cut(s) 530
RsaI GTAC 2 cut(s) 1038, 1562
RsaNI GTAC 2 cut(s) 1037, 1561
RseI CAYNNNNRTG 2 cut(s) 1098, 1196
SacI GAGCTC 1 cut(s) 1582
SaqAI TTAA 2 cut(s) 837, 1256
Sau3AI GATC 5 cut(s) 64, 202, 340, 875, 1615
Sau96I GGNCC 5 cut(s) 379, 641, 692, 722, 1212
ScaI AGTACT 1 cut(s) 1562
SchI GAGTC 1 cut(s) 1165
ScrFI CCNGG 1 cut(s) 781
SduI GDGCHC 2 cut(s) 1005, 1582
SfaNI GCATC 3 cut(s) 217, 246, 486
SfcI CTRYAG 2 cut(s) 1032, 1425
Sfr274I CTCGAG 1 cut(s) 1451
SinI GGWCC 4 cut(s) 379, 641, 692, 722
SlaI CTCGAG 1 cut(s) 1451
SmiMI CAYNNNNRTG 2 cut(s) 1098, 1196
SmlI CTYRAG 3 cut(s) 879, 1326, 1451
SmoI CTYRAG 3 cut(s) 879, 1326, 1451
Sse9I AATT 4 cut(s) 335, 442, 1494, 1512
SseBI AGGCCT 1 cut(s) 463
SsiI CCGC 2 cut(s) 36, 685
SspI AATATT 2 cut(s) 277, 478
SspMI CTAG 1 cut(s) 951
SstI GAGCTC 1 cut(s) 1582
StuI AGGCCT 1 cut(s) 463
StyD4I CCNGG 1 cut(s) 779
StyI CCWWGG 1 cut(s) 588
TaaI ACNGT 4 cut(s) 311, 372, 585, 1010
TaiI ACGT 1 cut(s) 1186
TaqI TCGA 4 cut(s) 1027, 1248, 1452, 1609
TasI AATT 4 cut(s) 335, 442, 1494, 1512
TatI WGTACW 2 cut(s) 1036, 1560
TfiI GAWTC 4 cut(s) 241, 614, 1240, 1376
Tru1I TTAA 2 cut(s) 837, 1256
Tru9I TTAA 2 cut(s) 837, 1256
TspDTI ATGAA 8 cut(s) 105, 283, 422, 1074, 1116, 1180, 1368, 1448
TspGWI ACGGA 1 cut(s) 1274
VpaK11BI GGWCC 4 cut(s) 379, 641, 692, 722
XapI RAATTY 1 cut(s) 1512
XceI RCATGY 2 cut(s) 503, 889
XhoI CTCGAG 1 cut(s) 1451
XmnI GAANNNNTTC 1 cut(s) 479
XspI CTAG 1 cut(s) 951
ZrmI AGTACT 1 cut(s) 1562
Zsp2I ATGCAT 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.