pycom12g05460
BZIP Family

Transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
5340862 .. 5349311
8450 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g05460.12

Sequence Viewer

Length: 1845 bp
ATGCATGGCATGGTCAAGGCAGTTTGGTCATTTCACATGAGGCTGAACGGAATAAGCTATATAGGGAGTGGTTTGGTCCACTTGGACAAGGAAGCCATAACTTGCAAGCTCTCTTCAACTCACAACCGACTTCTCTCTCTCCACCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACATGTGGATGATGTTCTTGGTAGGAGGAAACGGAAGGCGGTTTTACCATTAATGGGGCTTCTAAGAGGTTTTAATTTTGGAGGAGGAGAAGAAGAAAATAAAAGAGATCAGCAACTCTTAGACACAAAGCTCTTAGCTTCTTCTGCAACACCTACTTCTACATCTTCTTCTTTTCCCATGGCCTCCAGTATTCAAGAAAACAGCAATCAACTTGAACACCAACAACAACAACAACATCATCAAATACAAGATCAGCATCATCACCATCAGCAGCAGCAGATTCAATATGGGATGATGCAATCATCATCCTCCAATATTCCTGCTGGGAACTTCATATCAAGCAAAGACGGTGGAGCTGCTTATGATTTGATGGAAATCGATCAAGCTCTTTTTCTCTACCTTGATGGACAGTCACAGGACCAGCACAACCCTTCAGTTAATCATGTTCATCATCAAGACCAACGACATCCTCATCAAAATAACTCGTCATCTGGAATGAGGCCTCCAACTTTGAATATTTTCCCATCTCAGCCGATGCATGTAGAGCCATCATCAACCCAAGCAGCTGGAACGGGATTAGTTTCTTCTTCAAGTAGTGGTTCAAAGAGACCATCATTGCCGTCCATGGAGTTGGCCAACCCACGCAATGATTCTACTGCCCCTCCTCCTCCTTCTGGACCTCCTCAACAACCTGCCAAAGCTATCAAGCGTGAGGGTAACCGCAAGGGACCAACTACATCAAGTTCAGAGCAAGAAGGACCCAAAACGCCGGACCCTAAGACTCTGAGAAGGCTTGCTCAGAATAGAGAAGCAGCCAGAAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGTTAGAGACAAGTAGGATTAAGCTAACTCAACTGGAACAAGAGCTGCAAAGAGCTAGATCTCAAGGTATGTTCTTTGGAGGAGGACTTGTAGGAGGAGAGCAACAAAACCTTCCTGTTGGTATCAACAACATTAGCTCGGATGCTGCTGTTTTCGACATGGAGTATGCAAGGTGGCTGGAGGAGCACCATCGTCTCATGTGTGAGCTCCGAGCCGCAGTGCAAGAGCATTTGCCGGAGAATGAGCTGCGGCTTTTTGTGGACAACTGCTTGGCACATTATGAAGAAGTGTTGAACCTCAAAGGCATGGTTGCCAAGACCGATGTGTTTCATATTGTTTCTGGTATGTGGAAGAGTCCGGCTGAACGTTGCTTTATGTGGATGGGTGGATTTCGGCCCTCTGACGTTATCAAGATTATTCTGAATCAAATCGAGCCATTAACGGATCAGCAACTATTGGGTATTTGTGGGTTACAACAATCCACACAGGAGACTGAAGAAGCTCTCTCTCAAGGTCTTGAAGCTCTCAATCAGTCTCTCTCAGAGACCATAACCTCTGATTCATTGAGCTGCCCTCCCAACATGGCCAACTACATGGGACATATGGCTATAGCCATGAACAAGCTCTCCACCCTCGAGGGCTTCGTTAGACAGGCTGATAATCTGAGGCAGCAGACGATTCACCGGCTTCAACAAATTCTGACGACCCGTCAAGCAGCGAGGTGTTTGCTGGCAATTGCTGAGTACTTCCATCGTCTCCGAGCTCTCAGCTCTCTTTGGATGGCTCGTCCTCGACAAGATCAGTCATAA

Protein Analysis

615

Amino Acids

68.48

Weight (kDa)

8.13

Isoelectric Point (pI)

64.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1670
Acc36I ACCTGC 1 cut(s) 883
AciI CCGC 4 cut(s) 221, 904, 1251, 1285
AclI AACGTT 1 cut(s) 1402
AclWI GGATC 1 cut(s) 1488
AcoI YGGCCR 2 cut(s) 816, 1620
AcsI RAATTY 1 cut(s) 1731
AcuI CTGAAG 2 cut(s) 600, 1551
AfaI GTAC 1 cut(s) 1781
AfiI CCNNNNNNNGG 2 cut(s) 236, 857
AflIII ACRYGT 1 cut(s) 184
AhdI GACNNNNNGTC 1 cut(s) 1743
AloI GAACNNNNNNTCC 2 cut(s) 1646, 1678
Alw21I GWGCWC 3 cut(s) 1224, 1245, 1801
Alw26I GTCTC 7 cut(s) 784, 1037, 1235, 1520, 1574, 1575, 1796
AlwI GGATC 1 cut(s) 1488
Ama87I CYCGRG 1 cut(s) 1670
AoxI GGCC 5 cut(s) 363, 683, 816, 1430, 1620
ApoI RAATTY 1 cut(s) 1731
AseI ATTAAT 1 cut(s) 233
Asp700I GAANNNNTTC 1 cut(s) 701
AspS9I GGNCC 7 cut(s) 76, 601, 860, 911, 941, 955, 1431
AsuHPI GGTGA 2 cut(s) 437, 1709
AvaI CYCGRG 1 cut(s) 1670
AvaII GGWCC 6 cut(s) 76, 601, 860, 911, 941, 955
BalI TGGCCA 2 cut(s) 818, 1622
BanII GRGCYC 2 cut(s) 1245, 1801
Bbv12I GWGCWC 3 cut(s) 1224, 1245, 1801
BceAI ACGGC 1 cut(s) 787
BcgI CGANNNNNNTGC 2 cut(s) 1744, 1778
BcoDI GTCTC 7 cut(s) 784, 1037, 1235, 1520, 1574, 1575, 1796
BfaI CTAG 1 cut(s) 1092
BfmI CTRYAG 1 cut(s) 1644
BfuAI ACCTGC 1 cut(s) 883
BglII AGATCT 1 cut(s) 1094
BmcAI AGTACT 1 cut(s) 1781
Bme18I GGWCC 6 cut(s) 76, 601, 860, 911, 941, 955
BmeRI GACNNNNNGTC 1 cut(s) 1743
BmeT110I CYCGRG 1 cut(s) 1670
BmgT120I GGNCC 7 cut(s) 76, 601, 860, 911, 941, 955, 1431
BmiI GGNNCC 3 cut(s) 912, 943, 957
BmsI GCATC 4 cut(s) 448, 468, 708, 1168
BplI GAGNNNNNCTC 2 cut(s) 1594, 1626
BpmI CTGGAG 2 cut(s) 352, 1235
Bpu10I CCTNAGC 1 cut(s) 1013
BpuEI CTTGAG 2 cut(s) 1083, 1530
Bsa29I ATCGAT 1 cut(s) 561
BsaBI GATNNNNATC 2 cut(s) 438, 557
BsaI GGTCTC 2 cut(s) 784, 1574
BsaJI CCNNGG 2 cut(s) 360, 807
BsaXI ACNNNNNCTCC 6 cut(s) 829, 859, 1110, 1140, 1646, 1676
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 857
Bse118I RCCGGY 1 cut(s) 1719
Bse1I ACTGG 2 cut(s) 369, 1074
Bse3DI GCAATG 2 cut(s) 797, 835
Bse8I GATNNNNATC 2 cut(s) 438, 557
BseCI ATCGAT 1 cut(s) 561
BseDI CCNNGG 2 cut(s) 360, 807
BseGI GGATG 7 cut(s) 196, 480, 488, 649, 1183, 1422, 1821
BseJI GATNNNNATC 2 cut(s) 438, 557
BseLI CCNNNNNNNGG 2 cut(s) 236, 857
BseMI GCAATG 2 cut(s) 797, 835
BseMII CTCAG 7 cut(s) 725, 959, 995, 1590, 1691, 1767, 1816
BseNI ACTGG 2 cut(s) 369, 1074
BseRI GAGGAG 8 cut(s) 279, 282, 837, 840, 855, 1131, 1146, 1232
BseYI CCCAGC 1 cut(s) 506
BshFI GGCC 5 cut(s) 365, 685, 818, 1432, 1622
BshVI ATCGAT 1 cut(s) 561
BsiHKAI GWGCWC 3 cut(s) 1224, 1245, 1801
BsiHKCI CYCGRG 1 cut(s) 1670
BsiSI CCGG 4 cut(s) 953, 1271, 1394, 1720
BslFI GGGAC 2 cut(s) 924, 1647
BslI CCNNNNNNNGG 2 cut(s) 236, 857
BsmAI GTCTC 7 cut(s) 784, 1037, 1235, 1520, 1574, 1575, 1796
BsmBI CGTCTC 2 cut(s) 1235, 1796
BsmFI GGGAC 2 cut(s) 924, 1647
BsnI GGCC 5 cut(s) 365, 685, 818, 1432, 1622
Bso31I GGTCTC 2 cut(s) 784, 1574
BsoBI CYCGRG 1 cut(s) 1670
Bsp1286I GDGCHC 3 cut(s) 1224, 1245, 1801
Bsp143I GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
Bsp19I CCATGG 2 cut(s) 360, 807
BspACI CCGC 4 cut(s) 221, 904, 1251, 1285
BspANI GGCC 5 cut(s) 365, 685, 818, 1432, 1622
BspCNI CTCAG 7 cut(s) 724, 960, 994, 1589, 1692, 1768, 1815
BspDI ATCGAT 1 cut(s) 561
BspLI GGNNCC 3 cut(s) 912, 943, 957
BspMI ACCTGC 1 cut(s) 883
BspPI GGATC 1 cut(s) 1488
BspTNI GGTCTC 2 cut(s) 784, 1574
BsrDI GCAATG 2 cut(s) 797, 835
BsrFI RCCGGY 1 cut(s) 1719
BsrI ACTGG 2 cut(s) 369, 1074
BssAI RCCGGY 1 cut(s) 1719
BssECI CCNNGG 2 cut(s) 360, 807
BssMI GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
BssT1I CCWWGG 2 cut(s) 360, 807
Bst4CI ACNGT 2 cut(s) 533, 594
Bst6I CTCTTC 2 cut(s) 118, 1382
BstC8I GCNNGC 4 cut(s) 107, 978, 1010, 1767
BstDSI CCRYGG 2 cut(s) 360, 807
BstEII GGTNACC 1 cut(s) 899
BstF5I GGATG 7 cut(s) 196, 480, 488, 649, 1183, 1422, 1821
BstKTI GATC 6 cut(s) 292, 436, 565, 1097, 1483, 1837
BstMAI GTCTC 7 cut(s) 784, 1037, 1235, 1520, 1574, 1575, 1796
BstMBI GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
BstMWI GCNNNNNNNGC 3 cut(s) 326, 727, 1219
BstNSI RCATGY 2 cut(s) 188, 725
BstPI GGTNACC 1 cut(s) 899
BstSFI CTRYAG 1 cut(s) 1644
BstX2I RGATCY 1 cut(s) 1094
BstXI CCANNNNNNTGG 3 cut(s) 749, 814, 1630
BstYI RGATCY 1 cut(s) 1094
Bsu15I ATCGAT 1 cut(s) 561
BsuRI GGCC 5 cut(s) 365, 685, 818, 1432, 1622
BsuTUI ATCGAT 1 cut(s) 561
BtgI CCRYGG 2 cut(s) 360, 807
BtsCI GGATG 7 cut(s) 196, 480, 488, 649, 1183, 1422, 1821
BtsI GCAGTG 1 cut(s) 1260
BtsIMutI CAGTG 1 cut(s) 1260
BveI ACCTGC 1 cut(s) 883
Cac8I GCNNGC 4 cut(s) 107, 978, 1010, 1767
Cfr10I RCCGGY 1 cut(s) 1719
Cfr13I GGNCC 7 cut(s) 76, 601, 860, 911, 941, 955, 1431
ClaI ATCGAT 1 cut(s) 561
Csp6I GTAC 1 cut(s) 1780
CspCI CAANNNNNGTGG 2 cut(s) 514, 549
CviQI GTAC 1 cut(s) 1780
DpnI GATC 6 cut(s) 291, 435, 564, 1096, 1482, 1836
DpnII GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
DriI GACNNNNNGTC 1 cut(s) 1743
EaeI YGGCCR 2 cut(s) 816, 1620
Eam1104I CTCTTC 2 cut(s) 118, 1382
Eam1105I GACNNNNNGTC 1 cut(s) 1743
EarI CTCTTC 2 cut(s) 118, 1382
Ecl136II GAGCTC 2 cut(s) 1243, 1799
Eco130I CCWWGG 2 cut(s) 360, 807
Eco147I AGGCCT 1 cut(s) 685
Eco24I GRGCYC 2 cut(s) 1245, 1801
Eco31I GGTCTC 2 cut(s) 784, 1574
Eco47I GGWCC 6 cut(s) 76, 601, 860, 911, 941, 955
Eco53kI GAGCTC 2 cut(s) 1243, 1799
Eco57I CTGAAG 2 cut(s) 600, 1551
Eco88I CYCGRG 1 cut(s) 1670
Eco91I GGTNACC 1 cut(s) 899
EcoICRI GAGCTC 2 cut(s) 1243, 1799
EcoO109I RGGNCCY 1 cut(s) 941
EcoO65I GGTNACC 1 cut(s) 899
EcoT14I CCWWGG 2 cut(s) 360, 807
EcoT22I ATGCAT 2 cut(s) 6, 723
EcoT38I GRGCYC 2 cut(s) 1245, 1801
ErhI CCWWGG 2 cut(s) 360, 807
Esp3I CGTCTC 2 cut(s) 1235, 1796
FaqI GGGAC 2 cut(s) 924, 1647
FauNDI CATATG 2 cut(s) 1027, 1638
FokI GGATG 7 cut(s) 203, 475, 487, 636, 1190, 1429, 1828
FriOI GRGCYC 2 cut(s) 1245, 1801
FspBI CTAG 1 cut(s) 1092
GsaI CCCAGC 1 cut(s) 510
GsuI CTGGAG 2 cut(s) 352, 1235
HaeIII GGCC 5 cut(s) 365, 685, 818, 1432, 1622
HapII CCGG 4 cut(s) 953, 1271, 1394, 1720
HinfI GANTC 7 cut(s) 463, 833, 964, 1390, 1459, 1595, 1714
HpaII CCGG 4 cut(s) 953, 1271, 1394, 1720
HphI GGTGA 2 cut(s) 437, 1709
Hpy166II GTNNAC 2 cut(s) 79, 1297
Hpy188III TCNNGA 6 cut(s) 377, 638, 675, 858, 1447, 1553
Hpy8I GTNNAC 2 cut(s) 79, 1297
HpyAV CCTTC 7 cut(s) 155, 211, 624, 864, 932, 966, 1157
HpyCH4III ACNGT 2 cut(s) 533, 594
HpyCH4IV ACGT 2 cut(s) 1402, 1440
HpyCH4V TGCA 8 cut(s) 4, 105, 329, 481, 721, 1084, 1205, 1258
HpyF10VI GCNNNNNNNGC 3 cut(s) 326, 727, 1219
HpySE526I ACGT 2 cut(s) 1402, 1440
Kzo9I GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
LmnI GCTCC 3 cut(s) 536, 1219, 1248
LweI GCATC 4 cut(s) 448, 468, 708, 1168
MaeI CTAG 1 cut(s) 1092
MaeII ACGT 2 cut(s) 1402, 1440
MaeIII GTNAC 3 cut(s) 594, 899, 1506
MalI GATC 6 cut(s) 291, 435, 564, 1096, 1482, 1836
MboI GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
MfeI CAATTG 1 cut(s) 1770
MflI RGATCY 1 cut(s) 1094
MhlI GDGCHC 3 cut(s) 1224, 1245, 1801
MlsI TGGCCA 2 cut(s) 818, 1622
MluCI AATT 3 cut(s) 256, 1731, 1770
MluNI TGGCCA 2 cut(s) 818, 1622
MlyI GAGTC 2 cut(s) 958, 1399
MmeI TCCRAC 1 cut(s) 713
Mox20I TGGCCA 2 cut(s) 818, 1622
Mph1103I ATGCAT 2 cut(s) 6, 723
MroXI GAANNNNTTC 1 cut(s) 701
MscI TGGCCA 2 cut(s) 818, 1622
MseI TTAA 5 cut(s) 233, 255, 621, 1056, 1475
MslI CAYNNNNRTG 1 cut(s) 189
Msp20I TGGCCA 2 cut(s) 818, 1622
MspA1I CMGCKG 1 cut(s) 749
MspI CCGG 4 cut(s) 953, 1271, 1394, 1720
MunI CAATTG 1 cut(s) 1770
MwoI GCNNNNNNNGC 3 cut(s) 326, 727, 1219
NcoI CCATGG 2 cut(s) 360, 807
NdeI CATATG 2 cut(s) 1027, 1638
NdeII GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
NlaIV GGNNCC 3 cut(s) 912, 943, 957
NmuCI GTSAC 1 cut(s) 594
NsiI ATGCAT 2 cut(s) 6, 723
NspI RCATGY 2 cut(s) 188, 725
PaeR7I CTCGAG 1 cut(s) 1670
PceI AGGCCT 1 cut(s) 685
PciI ACATGT 1 cut(s) 184
PcsI WCGNNNNNNNCGW 1 cut(s) 1677
PdmI GAANNNNTTC 1 cut(s) 701
PfeI GAWTC 5 cut(s) 463, 833, 1459, 1595, 1714
PleI GAGTC 2 cut(s) 958, 1398
PpsI GAGTC 2 cut(s) 958, 1398
PpuMI RGGWCCY 1 cut(s) 941
PscI ACATGT 1 cut(s) 184
PshBI ATTAAT 1 cut(s) 233
Psp124BI GAGCTC 2 cut(s) 1245, 1801
Psp1406I AACGTT 1 cut(s) 1402
Psp5II RGGWCCY 1 cut(s) 941
PspEI GGTNACC 1 cut(s) 899
PspFI CCCAGC 1 cut(s) 506
PspN4I GGNNCC 3 cut(s) 912, 943, 957
PspPI GGNCC 7 cut(s) 76, 601, 860, 911, 941, 955, 1431
PspPPI RGGWCCY 1 cut(s) 941
PspXI VCTCGAGB 1 cut(s) 1670
PsuI RGATCY 1 cut(s) 1094
PvuII CAGCTG 1 cut(s) 749
RsaI GTAC 1 cut(s) 1781
RsaNI GTAC 1 cut(s) 1780
RseI CAYNNNNRTG 1 cut(s) 189
SacI GAGCTC 2 cut(s) 1245, 1801
SaqAI TTAA 5 cut(s) 233, 255, 621, 1056, 1475
Sau3AI GATC 6 cut(s) 289, 433, 562, 1094, 1480, 1834
Sau96I GGNCC 7 cut(s) 76, 601, 860, 911, 941, 955, 1431
ScaI AGTACT 1 cut(s) 1781
SchI GAGTC 2 cut(s) 958, 1399
SduI GDGCHC 3 cut(s) 1224, 1245, 1801
SfaNI GCATC 4 cut(s) 448, 468, 708, 1168
SfcI CTRYAG 1 cut(s) 1644
Sfr274I CTCGAG 1 cut(s) 1670
SinI GGWCC 6 cut(s) 76, 601, 860, 911, 941, 955
SlaI CTCGAG 1 cut(s) 1670
SmiMI CAYNNNNRTG 1 cut(s) 189
SmlI CTYRAG 3 cut(s) 1098, 1545, 1670
SmoI CTYRAG 3 cut(s) 1098, 1545, 1670
Sse9I AATT 3 cut(s) 256, 1731, 1770
SseBI AGGCCT 1 cut(s) 685
SsiI CCGC 4 cut(s) 221, 904, 1251, 1285
SspI AATATT 2 cut(s) 499, 700
SspMI CTAG 1 cut(s) 1092
SstI GAGCTC 2 cut(s) 1245, 1801
StuI AGGCCT 1 cut(s) 685
StyI CCWWGG 2 cut(s) 360, 807
TaaI ACNGT 2 cut(s) 533, 594
TaiI ACGT 2 cut(s) 1405, 1443
TaqI TCGA 5 cut(s) 561, 1191, 1467, 1671, 1828
TaqII GACCGA 1 cut(s) 1370
TasI AATT 3 cut(s) 256, 1731, 1770
TatI WGTACW 1 cut(s) 1779
TauI GCSGC 2 cut(s) 1253, 1288
TfiI GAWTC 5 cut(s) 463, 833, 1459, 1595, 1714
Tru1I TTAA 5 cut(s) 233, 255, 621, 1056, 1475
Tru9I TTAA 5 cut(s) 233, 255, 621, 1056, 1475
TscAI CASTG 1 cut(s) 1260
TseFI GTSAC 1 cut(s) 594
Tsp45I GTSAC 1 cut(s) 594
TspDTI ATGAA 6 cut(s) 505, 620, 1332, 1355, 1587, 1667
TspGWI ACGGA 3 cut(s) 63, 229, 1493
TspRI CASTG 1 cut(s) 1260
VpaK11BI GGWCC 6 cut(s) 76, 601, 860, 911, 941, 955
VspI ATTAAT 1 cut(s) 233
XapI RAATTY 1 cut(s) 1731
XceI RCATGY 2 cut(s) 188, 725
XhoI CTCGAG 1 cut(s) 1670
XmnI GAANNNNTTC 1 cut(s) 701
XspI CTAG 1 cut(s) 1092
ZrmI AGTACT 1 cut(s) 1781
Zsp2I ATGCAT 2 cut(s) 6, 723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.