Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G06839 AT5G06839 AT5G06839 |
| fragaria_vesca | FvH4_6g22750 FvH4_6g22750 FvH4_6g22750 FvH4_6g22750 |
| malus_domestica | MD12G1061900.v1.1 MD14G1062300.v1.1 |
| prunus_persica | Prupe.7G073000_v2.0.a1 Prupe.7G073000_v2.0.a1 |
| pyrus_communis | pycom12g05460 pycom14g04990 |
| rosa_chinensis | RchiOBHm_Chr3g0480361 |
| rosa_laevigata | RLG00000023490 |
| rosa_roxburghii | Rroxscaffold_6G00401490 |
| rosa_rugosa | Rorug03G0183200 |
| rosa_samantha | Rh3AG234700 Rh3BG267200 Rh3CG264500 Rh3DG260400 |
| rosa_wichuraiana | Rw3G021070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 1670 |
| Acc36I | ACCTGC | 1 cut(s) | 883 |
| AciI | CCGC | 4 cut(s) | 221, 904, 1251, 1285 |
| AclI | AACGTT | 1 cut(s) | 1402 |
| AclWI | GGATC | 1 cut(s) | 1488 |
| AcoI | YGGCCR | 2 cut(s) | 816, 1620 |
| AcsI | RAATTY | 1 cut(s) | 1731 |
| AcuI | CTGAAG | 2 cut(s) | 600, 1551 |
| AfaI | GTAC | 1 cut(s) | 1781 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 236, 857 |
| AflIII | ACRYGT | 1 cut(s) | 184 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1743 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1646, 1678 |
| Alw21I | GWGCWC | 3 cut(s) | 1224, 1245, 1801 |
| Alw26I | GTCTC | 7 cut(s) | 784, 1037, 1235, 1520, 1574, 1575, 1796 |
| AlwI | GGATC | 1 cut(s) | 1488 |
| Ama87I | CYCGRG | 1 cut(s) | 1670 |
| AoxI | GGCC | 5 cut(s) | 363, 683, 816, 1430, 1620 |
| ApoI | RAATTY | 1 cut(s) | 1731 |
| AseI | ATTAAT | 1 cut(s) | 233 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 701 |
| AspS9I | GGNCC | 7 cut(s) | 76, 601, 860, 911, 941, 955, 1431 |
| AsuHPI | GGTGA | 2 cut(s) | 437, 1709 |
| AvaI | CYCGRG | 1 cut(s) | 1670 |
| AvaII | GGWCC | 6 cut(s) | 76, 601, 860, 911, 941, 955 |
| BalI | TGGCCA | 2 cut(s) | 818, 1622 |
| BanII | GRGCYC | 2 cut(s) | 1245, 1801 |
| Bbv12I | GWGCWC | 3 cut(s) | 1224, 1245, 1801 |
| BceAI | ACGGC | 1 cut(s) | 787 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1744, 1778 |
| BcoDI | GTCTC | 7 cut(s) | 784, 1037, 1235, 1520, 1574, 1575, 1796 |
| BfaI | CTAG | 1 cut(s) | 1092 |
| BfmI | CTRYAG | 1 cut(s) | 1644 |
| BfuAI | ACCTGC | 1 cut(s) | 883 |
| BglII | AGATCT | 1 cut(s) | 1094 |
| BmcAI | AGTACT | 1 cut(s) | 1781 |
| Bme18I | GGWCC | 6 cut(s) | 76, 601, 860, 911, 941, 955 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1743 |
| BmeT110I | CYCGRG | 1 cut(s) | 1670 |
| BmgT120I | GGNCC | 7 cut(s) | 76, 601, 860, 911, 941, 955, 1431 |
| BmiI | GGNNCC | 3 cut(s) | 912, 943, 957 |
| BmsI | GCATC | 4 cut(s) | 448, 468, 708, 1168 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1594, 1626 |
| BpmI | CTGGAG | 2 cut(s) | 352, 1235 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1013 |
| BpuEI | CTTGAG | 2 cut(s) | 1083, 1530 |
| Bsa29I | ATCGAT | 1 cut(s) | 561 |
| BsaBI | GATNNNNATC | 2 cut(s) | 438, 557 |
| BsaI | GGTCTC | 2 cut(s) | 784, 1574 |
| BsaJI | CCNNGG | 2 cut(s) | 360, 807 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 829, 859, 1110, 1140, 1646, 1676 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 236, 857 |
| Bse118I | RCCGGY | 1 cut(s) | 1719 |
| Bse1I | ACTGG | 2 cut(s) | 369, 1074 |
| Bse3DI | GCAATG | 2 cut(s) | 797, 835 |
| Bse8I | GATNNNNATC | 2 cut(s) | 438, 557 |
| BseCI | ATCGAT | 1 cut(s) | 561 |
| BseDI | CCNNGG | 2 cut(s) | 360, 807 |
| BseGI | GGATG | 7 cut(s) | 196, 480, 488, 649, 1183, 1422, 1821 |
| BseJI | GATNNNNATC | 2 cut(s) | 438, 557 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 236, 857 |
| BseMI | GCAATG | 2 cut(s) | 797, 835 |
| BseMII | CTCAG | 7 cut(s) | 725, 959, 995, 1590, 1691, 1767, 1816 |
| BseNI | ACTGG | 2 cut(s) | 369, 1074 |
| BseRI | GAGGAG | 8 cut(s) | 279, 282, 837, 840, 855, 1131, 1146, 1232 |
| BseYI | CCCAGC | 1 cut(s) | 506 |
| BshFI | GGCC | 5 cut(s) | 365, 685, 818, 1432, 1622 |
| BshVI | ATCGAT | 1 cut(s) | 561 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1224, 1245, 1801 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1670 |
| BsiSI | CCGG | 4 cut(s) | 953, 1271, 1394, 1720 |
| BslFI | GGGAC | 2 cut(s) | 924, 1647 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 236, 857 |
| BsmAI | GTCTC | 7 cut(s) | 784, 1037, 1235, 1520, 1574, 1575, 1796 |
| BsmBI | CGTCTC | 2 cut(s) | 1235, 1796 |
| BsmFI | GGGAC | 2 cut(s) | 924, 1647 |
| BsnI | GGCC | 5 cut(s) | 365, 685, 818, 1432, 1622 |
| Bso31I | GGTCTC | 2 cut(s) | 784, 1574 |
| BsoBI | CYCGRG | 1 cut(s) | 1670 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1224, 1245, 1801 |
| Bsp143I | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| Bsp19I | CCATGG | 2 cut(s) | 360, 807 |
| BspACI | CCGC | 4 cut(s) | 221, 904, 1251, 1285 |
| BspANI | GGCC | 5 cut(s) | 365, 685, 818, 1432, 1622 |
| BspCNI | CTCAG | 7 cut(s) | 724, 960, 994, 1589, 1692, 1768, 1815 |
| BspDI | ATCGAT | 1 cut(s) | 561 |
| BspLI | GGNNCC | 3 cut(s) | 912, 943, 957 |
| BspMI | ACCTGC | 1 cut(s) | 883 |
| BspPI | GGATC | 1 cut(s) | 1488 |
| BspTNI | GGTCTC | 2 cut(s) | 784, 1574 |
| BsrDI | GCAATG | 2 cut(s) | 797, 835 |
| BsrFI | RCCGGY | 1 cut(s) | 1719 |
| BsrI | ACTGG | 2 cut(s) | 369, 1074 |
| BssAI | RCCGGY | 1 cut(s) | 1719 |
| BssECI | CCNNGG | 2 cut(s) | 360, 807 |
| BssMI | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| BssT1I | CCWWGG | 2 cut(s) | 360, 807 |
| Bst4CI | ACNGT | 2 cut(s) | 533, 594 |
| Bst6I | CTCTTC | 2 cut(s) | 118, 1382 |
| BstC8I | GCNNGC | 4 cut(s) | 107, 978, 1010, 1767 |
| BstDSI | CCRYGG | 2 cut(s) | 360, 807 |
| BstEII | GGTNACC | 1 cut(s) | 899 |
| BstF5I | GGATG | 7 cut(s) | 196, 480, 488, 649, 1183, 1422, 1821 |
| BstKTI | GATC | 6 cut(s) | 292, 436, 565, 1097, 1483, 1837 |
| BstMAI | GTCTC | 7 cut(s) | 784, 1037, 1235, 1520, 1574, 1575, 1796 |
| BstMBI | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 326, 727, 1219 |
| BstNSI | RCATGY | 2 cut(s) | 188, 725 |
| BstPI | GGTNACC | 1 cut(s) | 899 |
| BstSFI | CTRYAG | 1 cut(s) | 1644 |
| BstX2I | RGATCY | 1 cut(s) | 1094 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 749, 814, 1630 |
| BstYI | RGATCY | 1 cut(s) | 1094 |
| Bsu15I | ATCGAT | 1 cut(s) | 561 |
| BsuRI | GGCC | 5 cut(s) | 365, 685, 818, 1432, 1622 |
| BsuTUI | ATCGAT | 1 cut(s) | 561 |
| BtgI | CCRYGG | 2 cut(s) | 360, 807 |
| BtsCI | GGATG | 7 cut(s) | 196, 480, 488, 649, 1183, 1422, 1821 |
| BtsI | GCAGTG | 1 cut(s) | 1260 |
| BtsIMutI | CAGTG | 1 cut(s) | 1260 |
| BveI | ACCTGC | 1 cut(s) | 883 |
| Cac8I | GCNNGC | 4 cut(s) | 107, 978, 1010, 1767 |
| Cfr10I | RCCGGY | 1 cut(s) | 1719 |
| Cfr13I | GGNCC | 7 cut(s) | 76, 601, 860, 911, 941, 955, 1431 |
| ClaI | ATCGAT | 1 cut(s) | 561 |
| Csp6I | GTAC | 1 cut(s) | 1780 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 514, 549 |
| CviQI | GTAC | 1 cut(s) | 1780 |
| DpnI | GATC | 6 cut(s) | 291, 435, 564, 1096, 1482, 1836 |
| DpnII | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1743 |
| EaeI | YGGCCR | 2 cut(s) | 816, 1620 |
| Eam1104I | CTCTTC | 2 cut(s) | 118, 1382 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1743 |
| EarI | CTCTTC | 2 cut(s) | 118, 1382 |
| Ecl136II | GAGCTC | 2 cut(s) | 1243, 1799 |
| Eco130I | CCWWGG | 2 cut(s) | 360, 807 |
| Eco147I | AGGCCT | 1 cut(s) | 685 |
| Eco24I | GRGCYC | 2 cut(s) | 1245, 1801 |
| Eco31I | GGTCTC | 2 cut(s) | 784, 1574 |
| Eco47I | GGWCC | 6 cut(s) | 76, 601, 860, 911, 941, 955 |
| Eco53kI | GAGCTC | 2 cut(s) | 1243, 1799 |
| Eco57I | CTGAAG | 2 cut(s) | 600, 1551 |
| Eco88I | CYCGRG | 1 cut(s) | 1670 |
| Eco91I | GGTNACC | 1 cut(s) | 899 |
| EcoICRI | GAGCTC | 2 cut(s) | 1243, 1799 |
| EcoO109I | RGGNCCY | 1 cut(s) | 941 |
| EcoO65I | GGTNACC | 1 cut(s) | 899 |
| EcoT14I | CCWWGG | 2 cut(s) | 360, 807 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 723 |
| EcoT38I | GRGCYC | 2 cut(s) | 1245, 1801 |
| ErhI | CCWWGG | 2 cut(s) | 360, 807 |
| Esp3I | CGTCTC | 2 cut(s) | 1235, 1796 |
| FaqI | GGGAC | 2 cut(s) | 924, 1647 |
| FauNDI | CATATG | 2 cut(s) | 1027, 1638 |
| FokI | GGATG | 7 cut(s) | 203, 475, 487, 636, 1190, 1429, 1828 |
| FriOI | GRGCYC | 2 cut(s) | 1245, 1801 |
| FspBI | CTAG | 1 cut(s) | 1092 |
| GsaI | CCCAGC | 1 cut(s) | 510 |
| GsuI | CTGGAG | 2 cut(s) | 352, 1235 |
| HaeIII | GGCC | 5 cut(s) | 365, 685, 818, 1432, 1622 |
| HapII | CCGG | 4 cut(s) | 953, 1271, 1394, 1720 |
| HinfI | GANTC | 7 cut(s) | 463, 833, 964, 1390, 1459, 1595, 1714 |
| HpaII | CCGG | 4 cut(s) | 953, 1271, 1394, 1720 |
| HphI | GGTGA | 2 cut(s) | 437, 1709 |
| Hpy166II | GTNNAC | 2 cut(s) | 79, 1297 |
| Hpy188III | TCNNGA | 6 cut(s) | 377, 638, 675, 858, 1447, 1553 |
| Hpy8I | GTNNAC | 2 cut(s) | 79, 1297 |
| HpyAV | CCTTC | 7 cut(s) | 155, 211, 624, 864, 932, 966, 1157 |
| HpyCH4III | ACNGT | 2 cut(s) | 533, 594 |
| HpyCH4IV | ACGT | 2 cut(s) | 1402, 1440 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 105, 329, 481, 721, 1084, 1205, 1258 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 326, 727, 1219 |
| HpySE526I | ACGT | 2 cut(s) | 1402, 1440 |
| Kzo9I | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| LmnI | GCTCC | 3 cut(s) | 536, 1219, 1248 |
| LweI | GCATC | 4 cut(s) | 448, 468, 708, 1168 |
| MaeI | CTAG | 1 cut(s) | 1092 |
| MaeII | ACGT | 2 cut(s) | 1402, 1440 |
| MaeIII | GTNAC | 3 cut(s) | 594, 899, 1506 |
| MalI | GATC | 6 cut(s) | 291, 435, 564, 1096, 1482, 1836 |
| MboI | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| MfeI | CAATTG | 1 cut(s) | 1770 |
| MflI | RGATCY | 1 cut(s) | 1094 |
| MhlI | GDGCHC | 3 cut(s) | 1224, 1245, 1801 |
| MlsI | TGGCCA | 2 cut(s) | 818, 1622 |
| MluCI | AATT | 3 cut(s) | 256, 1731, 1770 |
| MluNI | TGGCCA | 2 cut(s) | 818, 1622 |
| MlyI | GAGTC | 2 cut(s) | 958, 1399 |
| MmeI | TCCRAC | 1 cut(s) | 713 |
| Mox20I | TGGCCA | 2 cut(s) | 818, 1622 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 723 |
| MroXI | GAANNNNTTC | 1 cut(s) | 701 |
| MscI | TGGCCA | 2 cut(s) | 818, 1622 |
| MseI | TTAA | 5 cut(s) | 233, 255, 621, 1056, 1475 |
| MslI | CAYNNNNRTG | 1 cut(s) | 189 |
| Msp20I | TGGCCA | 2 cut(s) | 818, 1622 |
| MspA1I | CMGCKG | 1 cut(s) | 749 |
| MspI | CCGG | 4 cut(s) | 953, 1271, 1394, 1720 |
| MunI | CAATTG | 1 cut(s) | 1770 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 326, 727, 1219 |
| NcoI | CCATGG | 2 cut(s) | 360, 807 |
| NdeI | CATATG | 2 cut(s) | 1027, 1638 |
| NdeII | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| NlaIV | GGNNCC | 3 cut(s) | 912, 943, 957 |
| NmuCI | GTSAC | 1 cut(s) | 594 |
| NsiI | ATGCAT | 2 cut(s) | 6, 723 |
| NspI | RCATGY | 2 cut(s) | 188, 725 |
| PaeR7I | CTCGAG | 1 cut(s) | 1670 |
| PceI | AGGCCT | 1 cut(s) | 685 |
| PciI | ACATGT | 1 cut(s) | 184 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1677 |
| PdmI | GAANNNNTTC | 1 cut(s) | 701 |
| PfeI | GAWTC | 5 cut(s) | 463, 833, 1459, 1595, 1714 |
| PleI | GAGTC | 2 cut(s) | 958, 1398 |
| PpsI | GAGTC | 2 cut(s) | 958, 1398 |
| PpuMI | RGGWCCY | 1 cut(s) | 941 |
| PscI | ACATGT | 1 cut(s) | 184 |
| PshBI | ATTAAT | 1 cut(s) | 233 |
| Psp124BI | GAGCTC | 2 cut(s) | 1245, 1801 |
| Psp1406I | AACGTT | 1 cut(s) | 1402 |
| Psp5II | RGGWCCY | 1 cut(s) | 941 |
| PspEI | GGTNACC | 1 cut(s) | 899 |
| PspFI | CCCAGC | 1 cut(s) | 506 |
| PspN4I | GGNNCC | 3 cut(s) | 912, 943, 957 |
| PspPI | GGNCC | 7 cut(s) | 76, 601, 860, 911, 941, 955, 1431 |
| PspPPI | RGGWCCY | 1 cut(s) | 941 |
| PspXI | VCTCGAGB | 1 cut(s) | 1670 |
| PsuI | RGATCY | 1 cut(s) | 1094 |
| PvuII | CAGCTG | 1 cut(s) | 749 |
| RsaI | GTAC | 1 cut(s) | 1781 |
| RsaNI | GTAC | 1 cut(s) | 1780 |
| RseI | CAYNNNNRTG | 1 cut(s) | 189 |
| SacI | GAGCTC | 2 cut(s) | 1245, 1801 |
| SaqAI | TTAA | 5 cut(s) | 233, 255, 621, 1056, 1475 |
| Sau3AI | GATC | 6 cut(s) | 289, 433, 562, 1094, 1480, 1834 |
| Sau96I | GGNCC | 7 cut(s) | 76, 601, 860, 911, 941, 955, 1431 |
| ScaI | AGTACT | 1 cut(s) | 1781 |
| SchI | GAGTC | 2 cut(s) | 958, 1399 |
| SduI | GDGCHC | 3 cut(s) | 1224, 1245, 1801 |
| SfaNI | GCATC | 4 cut(s) | 448, 468, 708, 1168 |
| SfcI | CTRYAG | 1 cut(s) | 1644 |
| Sfr274I | CTCGAG | 1 cut(s) | 1670 |
| SinI | GGWCC | 6 cut(s) | 76, 601, 860, 911, 941, 955 |
| SlaI | CTCGAG | 1 cut(s) | 1670 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 189 |
| SmlI | CTYRAG | 3 cut(s) | 1098, 1545, 1670 |
| SmoI | CTYRAG | 3 cut(s) | 1098, 1545, 1670 |
| Sse9I | AATT | 3 cut(s) | 256, 1731, 1770 |
| SseBI | AGGCCT | 1 cut(s) | 685 |
| SsiI | CCGC | 4 cut(s) | 221, 904, 1251, 1285 |
| SspI | AATATT | 2 cut(s) | 499, 700 |
| SspMI | CTAG | 1 cut(s) | 1092 |
| SstI | GAGCTC | 2 cut(s) | 1245, 1801 |
| StuI | AGGCCT | 1 cut(s) | 685 |
| StyI | CCWWGG | 2 cut(s) | 360, 807 |
| TaaI | ACNGT | 2 cut(s) | 533, 594 |
| TaiI | ACGT | 2 cut(s) | 1405, 1443 |
| TaqI | TCGA | 5 cut(s) | 561, 1191, 1467, 1671, 1828 |
| TaqII | GACCGA | 1 cut(s) | 1370 |
| TasI | AATT | 3 cut(s) | 256, 1731, 1770 |
| TatI | WGTACW | 1 cut(s) | 1779 |
| TauI | GCSGC | 2 cut(s) | 1253, 1288 |
| TfiI | GAWTC | 5 cut(s) | 463, 833, 1459, 1595, 1714 |
| Tru1I | TTAA | 5 cut(s) | 233, 255, 621, 1056, 1475 |
| Tru9I | TTAA | 5 cut(s) | 233, 255, 621, 1056, 1475 |
| TscAI | CASTG | 1 cut(s) | 1260 |
| TseFI | GTSAC | 1 cut(s) | 594 |
| Tsp45I | GTSAC | 1 cut(s) | 594 |
| TspDTI | ATGAA | 6 cut(s) | 505, 620, 1332, 1355, 1587, 1667 |
| TspGWI | ACGGA | 3 cut(s) | 63, 229, 1493 |
| TspRI | CASTG | 1 cut(s) | 1260 |
| VpaK11BI | GGWCC | 6 cut(s) | 76, 601, 860, 911, 941, 955 |
| VspI | ATTAAT | 1 cut(s) | 233 |
| XapI | RAATTY | 1 cut(s) | 1731 |
| XceI | RCATGY | 2 cut(s) | 188, 725 |
| XhoI | CTCGAG | 1 cut(s) | 1670 |
| XmnI | GAANNNNTTC | 1 cut(s) | 701 |
| XspI | CTAG | 1 cut(s) | 1092 |
| ZrmI | AGTACT | 1 cut(s) | 1781 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 723 |