Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0003041

Physical Location & Seq

Genomic Coordinates Forward (+)

26640834 .. 26646282

Gene Structure 5449 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1172500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGCCTCAGCTTCGAAAAAAACGACGCCTTCCTGTTGCTTCCGCCCCGATTCGGCGGCTCTCGTTCCGCGCGAGGCGGCGCCGGCGGCGCAGACTTCTTCCAACGCCGTTGTATCGGCCTCCGCCGTGCAAGATTGGACTGGCGTCACCGGCGCCGAGGATCGGCGCGATGATCAGCGCCCCAAGAAGATCGCAATGGCGGCCTTGATTCCTGAACCTTCTGCCAATGCCTCCACTACAGGCATCTCAATCATGCTTAGGCCTCAAACAAGGCATCCATTGGACCCTTTATCTGCTGCTGAAATCTCTGTGGCAGTGGCAACTGTCAGGGCAGCTGGAGCGACACCCGAGGTTAGAGATAGTATGCGTTTTGTTGAAGTGGTTCTACTGGAACCAGATAAGCACGTTGTTGCACTAGCGGATGCATACTTTTTTCCACCTTTCCAACCATCATTACTTCCCAGAACCAAAGGTGGACCTATAATCCCAACCAAGCTTCCCCCTCGGCGAGCTCGACTTGTTGTTTACAACAAGAAGTCAAATGAGACGAGCACATGGATTGTTGAGCTGTCCGAAGTACATGCAGCTACTCGAGGTGGACATCACAGAGGAAAAGTAATATCATCGGAAGTTGTTCCAGATGTTCAGCCTCCCATGGATGCTGTGGAATATGCAGAATGTGAAGCAGTTGTGAAAGACTTTCCTCCATTTAGAGAAGCTATGAAGAAGAGAGGTATTGAAGACATGGACCTCGTGATGGTTGATGCCTGGTGTGTTGGCTATCATAGTGAGGCTGATGCTCCTAGCCAAAGACTTGCTAAACCATTGATATTCTGTAGAACTGAGAGTGACTGCCCAATGGAAAATGGTTACGCACGCCCAGTTGAGGGCATCTATATTCTTGTTGATATGCAAAACATGGTGGTGATAAAGTTTGAAGACCGTAAGCTTGTTCCCCTACCTCCAGCTGATCCATTGAGGAACTATACTCCTGGAGAAACAAGAGGTGGTGTTGATCGAAGTGATGTGAAGCCTTTACAAATTATTCAGCCTGAAGGTCCAAGCTTTCGTGTTAATGGGTACTTTGTGGAGTGGCAGAAGTGGAATTTTCGTATTGGATTCACTCCCAGGGAGGGACTGGTTATATATTCTGTGGCATATGTTGACGGCAATAGAGGTCGAAGGCCTGTAGCCCATAGGTTGAGTTTTGTGGAAATGGTGGTGCCATATGGAGATCCTAATGATCCACATTATAGAAAAAATGCTTTTGATGCCGGGGAAGATGGCCTTGGTAAAAATGCACATTCCCTAAAGAAGGGGTGTGATTGTTTGGGCTTAATCAAATACTTTGATGCACACTTTACAAATTTCACTGGAGGTGTTGAAACTATCGAAAATTGTGTATGTTTGCACGAAGAAGATCATGGAATTCTGTGGAAGCATCAGGACTGGAGAACAGGCTTAGCAGAAGTGCGCAGGTCAAGAAGGCTAACAGTGTCATTTATATGTACTGTGGCTAATTATGAGTACGGGTTCTTCTGGCACTTTTATCAGGATGGAAAAATTGAAGCTGAAGTTAAACTTACAGGAGTTCTCAGCTTGGGGGCACTACAACCTGGAGAAGTTAGAAAATATGGAACTGTGATTGCACCTGGGCTATATGCACCAGTCCATCAACACTTTTTTGTTGCTCGTATGGATATGGCTGTTGATTGCAAGCCTGGGGAAACTTTCAATCAGGTTGTGGAGATGGATGTTAAGGTTGAGAAACCTGGAGAGAATAATGTCCACAGCAATGCATTTTATGCTGAGGAGACACTTCTCAGGACTGAATCAGAGGCAATGCGTGACTGTAATCCTTTGACGGCTCGCCATTGGATTGTACGGAACACACGAACTGTTAATAGGACTGGACAGTTAACAGGCTACAAGCTTGTACCGGGTTCAAACTGTTTGCCATTAGCTGGTCCCGAGGCCAAGTTTTTGCGAAGAGCAGCTTTCCTGAAGCATAATCTATGGGTTACACAATATTCTCGTGATGAAATGTTTCCCGGAGGAGAGTTTCCAAATCAAAATCCACGTGCTGGTGAAGGATTGGCCACTTGGGTTAAGAAAAATCGATCTCTGGAAGAAACTGACATTGTTCTTTGGTATGTATTCGGAATCACACACGTACCACGGTTGGAAGACTGGCCTGTCATGCCGGTGGAGCGCATCGGATTTATGCTCATGCCTCACGGATTCTTCAACGCCTCTCCGGCAGTGGATGTTCCACCAAGTGCATGTGAGTTGGAAGCCAAGGAAAATGATGTCAAAGACAGCGGAGTAGCCAAGCCCATTCAGAACGGGTTGCTAGCAAAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

789

Amino Acids

87.75

Weight (kDa)

6.52

Isoelectric Point (pI)

38.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN3	PF02728	217 - 320	4.7e-28	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	346 - 754	8.8e-155	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42490
fragaria_vesca	FvH4_2g01360 FvH4_2g01360 FvH4_2g01360 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090
malus_domestica	MD06G1166900.v1.1 MD13G1102300.v1.1 MD14G1172500.v1.1
prunus_persica	Prupe.1G243500_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1
pyrus_communis	pycom13g08940 pycom14g14400
rosa_chinensis	RchiOBHm_Chr4g0432841 RchiOBHm_Chr7g0192721
rosa_laevigata	RLG00000004334 RLG00000006809
rosa_multiflora	Rmu_sc0002040.1_g000015 Rmu_sc0005234.1_g000004
rosa_roxburghii	Rroxscaffold_3G00262720 Rroxscaffold_5G00374260
rosa_rugosa	Rorug04G0263100 Rorug07G0004200
rosa_samantha	Rh4AG317300 Rh4BG325500 Rh4CG340400 Rh4DG320700 Rh7DG131400
rosa_wichuraiana	Rw4G027600 Rw7G011050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2195
Acc16I	TGCGCA	1 cut(s)	1475
Acc36I	ACCTGC	1 cut(s)	1467
AccB1I	GGYRCC	3 cut(s)	79, 152, 1222
AccB7I	CCANNNNNTGG	2 cut(s)	1964, 2084
AccII	CGCG	3 cut(s)	70, 72, 168
AciI	CCGC	9 cut(s)	43, 56, 68, 77, 86, 123, 200, 419, 2322
AclWI	GGATC	4 cut(s)	168, 965, 1229, 1238
AcoI	YGGCCR	1 cut(s)	2097
AcsI	RAATTY	3 cut(s)	1105, 1366, 1428
AcuI	CTGAAG	3 cut(s)	1074, 1593, 2024
AcvI	CACGTG	1 cut(s)	2081
AcyI	GRCGYC	4 cut(s)	26, 80, 144, 153
AdeI	CACNNNGTG	1 cut(s)	2279
AfaI	GTAC	7 cut(s)	579, 1082, 1510, 1529, 1884, 1938, 2175
AfiI	CCNNNNNNNGG	9 cut(s)	52, 162, 757, 886, 887, 1133, 1315, 1964, 2084
AflIII	ACRYGT	1 cut(s)	2170
AgsI	TTSAA	8 cut(s)	377, 740, 938, 1385, 1568, 1735, 1947, 2248
AjnI	CCWGG	7 cut(s)	767, 991, 1127, 1615, 1651, 1720, 1771
AjuI	GAANNNNNNNTTGG	2 cut(s)	1272, 1304
Alw21I	GWGCWC	2 cut(s)	514, 554
Alw26I	GTCTC	2 cut(s)	539, 1808
AlwI	GGATC	4 cut(s)	168, 965, 1229, 1238
Ama87I	CYCGRG	3 cut(s)	347, 591, 1970
AoxI	GGCC	9 cut(s)	3, 117, 201, 260, 1184, 1285, 1974, 2097, 2192
ApeKI	GCWGC	4 cut(s)	296, 332, 584, 1994
ApoI	RAATTY	3 cut(s)	1105, 1366, 1428
Asp700I	GAANNNNTTC	3 cut(s)	381, 633, 2046
AspLEI	GCGC	8 cut(s)	72, 82, 91, 155, 168, 180, 1476, 2214
AspS9I	GGNCC	5 cut(s)	283, 476, 748, 1058, 1967
AsuC2I	CCSGG	3 cut(s)	1276, 1941, 2052
AsuHPI	GGTGA	3 cut(s)	139, 937, 2099
AsuII	TTCGAA	1 cut(s)	14
AsuNHI	GCTAGC	1 cut(s)	2353
AvaI	CYCGRG	3 cut(s)	347, 591, 1970
AvaII	GGWCC	5 cut(s)	283, 476, 748, 1058, 1967
BaeGI	GKGCMC	1 cut(s)	1609
BaeI	ACNNNNGTAYC	2 cut(s)	2157, 2190
BalI	TGGCCA	1 cut(s)	2099
BanI	GGYRCC	3 cut(s)	79, 152, 1222
BanII	GRGCYC	1 cut(s)	514
BarI	GAAGNNNNNNTAC	4 cut(s)	369, 401, 1520, 1552
BauI	CACGAG	2 cut(s)	752, 2034
BbrPI	CACGTG	1 cut(s)	2081
BbsI	GAAGAC	3 cut(s)	747, 945, 2193
Bbv12I	GWGCWC	2 cut(s)	514, 554
BbvCI	CCTCAGC	2 cut(s)	7, 1809
BbvI	GCAGC	4 cut(s)	283, 344, 596, 2006
BccI	CCATC	6 cut(s)	457, 751, 1277, 1550, 1680, 1744
BceAI	ACGGC	4 cut(s)	92, 110, 1183, 1881
BcgI	CGANNNNNNTGC	2 cut(s)	563, 597
BciT130I	CCWGG	7 cut(s)	769, 993, 1129, 1617, 1653, 1722, 1773
BclI	TGATCA	1 cut(s)	172
BcnI	CCSGG	3 cut(s)	1276, 1941, 2052
BcoDI	GTCTC	2 cut(s)	539, 1808
BfaI	CTAG	3 cut(s)	416, 804, 2354
BfmI	CTRYAG	3 cut(s)	237, 835, 1188
BfoI	RGCGCY	3 cut(s)	83, 156, 181
BfuAI	ACCTGC	1 cut(s)	1467
BglI	GCCNNNNNGGC	1 cut(s)	2258
BisI	GCNGC	8 cut(s)	57, 78, 87, 201, 297, 333, 585, 1995
BlpI	GCTNAGC	1 cut(s)	1462
BlsI	GCNGC	8 cut(s)	58, 79, 88, 202, 298, 334, 586, 1996
Bme18I	GGWCC	5 cut(s)	283, 476, 748, 1058, 1967
BmeT110I	CYCGRG	3 cut(s)	347, 591, 1970
BmgT120I	GGNCC	5 cut(s)	283, 476, 748, 1058, 1967
BmiI	GGNNCC	6 cut(s)	81, 154, 285, 393, 1224, 1969
BmrI	ACTGGG	1 cut(s)	875
BmtI	GCTAGC	1 cut(s)	2357
BmuI	ACTGGG	1 cut(s)	875
BoxI	GACNNNNGTC	1 cut(s)	143
BpiI	GAAGAC	3 cut(s)	747, 945, 2193
BpmI	CTGGAG	7 cut(s)	357, 948, 1014, 1395, 1471, 1638, 1794
Bpu10I	CCTNAGC	3 cut(s)	7, 257, 1809
Bpu1102I	GCTNAGC	1 cut(s)	1462
Bpu14I	TTCGAA	1 cut(s)	14
BpuMI	CCSGG	3 cut(s)	1276, 1941, 2052
Bsa29I	ATCGAT	1 cut(s)	2119
BsaAI	YACGTR	2 cut(s)	2081, 2173
BsaHI	GRCGYC	4 cut(s)	26, 80, 144, 153
Bsc4I	CCNNNNNNNGG	9 cut(s)	52, 162, 757, 886, 887, 1133, 1315, 1964, 2084
Bse118I	RCCGGY	3 cut(s)	82, 149, 2203
Bse1I	ACTGG	9 cut(s)	145, 393, 881, 1143, 1378, 1454, 1667, 1915, 2195
Bse3DI	GCAATG	3 cut(s)	201, 1801, 1848
BseBI	CCWGG	7 cut(s)	769, 993, 1129, 1617, 1653, 1722, 1773
BseCI	ATCGAT	1 cut(s)	2119
BseGI	GGATG	6 cut(s)	274, 427, 664, 1561, 1759, 2272
BseLI	CCNNNNNNNGG	9 cut(s)	52, 162, 757, 886, 887, 1133, 1315, 1964, 2084
BseMI	GCAATG	3 cut(s)	201, 1801, 1848
BseMII	CTCAG	5 cut(s)	21, 834, 1609, 1800, 1837
BseNI	ACTGG	9 cut(s)	145, 393, 881, 1143, 1378, 1454, 1667, 1915, 2195
BseRI	GAGGAG	2 cut(s)	1826, 2070
BseSI	GKGCMC	1 cut(s)	1609
BseXI	GCAGC	4 cut(s)	283, 344, 596, 2006
Bsh1236I	CGCG	3 cut(s)	70, 72, 168
BshFI	GGCC	9 cut(s)	5, 119, 203, 262, 1186, 1287, 1976, 2099, 2194
BshNI	GGYRCC	3 cut(s)	79, 152, 1222
BshVI	ATCGAT	1 cut(s)	2119
BsiHKAI	GWGCWC	2 cut(s)	514, 554
BsiHKCI	CYCGRG	3 cut(s)	347, 591, 1970
BsiSI	CCGG	7 cut(s)	83, 150, 1275, 1940, 2052, 2204, 2258
BslFI	GGGAC	2 cut(s)	1149, 1953
BslI	CCNNNNNNNGG	9 cut(s)	52, 162, 757, 886, 887, 1133, 1315, 1964, 2084
BsmAI	GTCTC	2 cut(s)	539, 1808
BsmBI	CGTCTC	1 cut(s)	539
BsmFI	GGGAC	2 cut(s)	1149, 1953
BsnI	GGCC	9 cut(s)	5, 119, 203, 262, 1186, 1287, 1976, 2099, 2194
BsoBI	CYCGRG	3 cut(s)	347, 591, 1970
Bsp119I	TTCGAA	1 cut(s)	14
Bsp1286I	GDGCHC	3 cut(s)	514, 554, 1609
Bsp143I	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
Bsp1720I	GCTNAGC	1 cut(s)	1462
Bsp19I	CCATGG	1 cut(s)	654
BspACI	CCGC	9 cut(s)	43, 56, 68, 77, 86, 123, 200, 419, 2322
BspANI	GGCC	9 cut(s)	5, 119, 203, 262, 1186, 1287, 1976, 2099, 2194
BspCNI	CTCAG	5 cut(s)	20, 835, 1608, 1801, 1836
BspDI	ATCGAT	1 cut(s)	2119
BspFNI	CGCG	3 cut(s)	70, 72, 168
BspLI	GGNNCC	6 cut(s)	81, 154, 285, 393, 1224, 1969
BspMI	ACCTGC	1 cut(s)	1467
BspOI	GCTAGC	1 cut(s)	2357
BspPI	GGATC	4 cut(s)	168, 965, 1229, 1238
BspQI	GCTCTTC	1 cut(s)	1984
BspT104I	TTCGAA	1 cut(s)	14
BspT107I	GGYRCC	3 cut(s)	79, 152, 1222
BsrDI	GCAATG	3 cut(s)	201, 1801, 1848
BsrFI	RCCGGY	3 cut(s)	82, 149, 2203
BsrI	ACTGG	9 cut(s)	145, 393, 881, 1143, 1378, 1454, 1667, 1915, 2195
BssAI	RCCGGY	3 cut(s)	82, 149, 2203
BssMI	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
BssNI	GRCGYC	4 cut(s)	26, 80, 144, 153
BssSI	CACGAG	2 cut(s)	752, 2034
BssT1I	CCWWGG	3 cut(s)	654, 1288, 2298
Bst2BI	CACGAG	2 cut(s)	752, 2034
Bst2UI	CCWGG	7 cut(s)	769, 993, 1129, 1617, 1653, 1722, 1773
Bst6I	CTCTTC	2 cut(s)	722, 1984
BstACI	GRCGYC	4 cut(s)	26, 80, 144, 153
BstAPI	GCANNNNNTGC	1 cut(s)	1805
BstBAI	YACGTR	2 cut(s)	2081, 2173
BstBI	TTCGAA	1 cut(s)	14
BstC8I	GCNNGC	6 cut(s)	84, 510, 877, 1718, 1870, 2355
BstDEI	CTNAG	7 cut(s)	7, 257, 843, 1462, 1595, 1809, 1823
BstDSI	CCRYGG	2 cut(s)	654, 2177
BstENI	CCTNNNNNAGG	1 cut(s)	1313
BstF5I	GGATG	6 cut(s)	274, 427, 664, 1561, 1759, 2272
BstFNI	CGCG	3 cut(s)	70, 72, 168
BstH2I	RGCGCY	3 cut(s)	83, 156, 181
BstHHI	GCGC	8 cut(s)	72, 82, 91, 155, 168, 180, 1476, 2214
BstKTI	GATC	9 cut(s)	163, 175, 192, 973, 1018, 1237, 1246, 1423, 2123
BstMAI	GTCTC	2 cut(s)	539, 1808
BstMBI	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
BstNI	CCWGG	7 cut(s)	769, 993, 1129, 1617, 1653, 1722, 1773
BstNSI	RCATGY	2 cut(s)	584, 2286
BstPAI	GACNNNNGTC	1 cut(s)	143
BstSFI	CTRYAG	3 cut(s)	237, 835, 1188
BstSLI	GKGCMC	1 cut(s)	1609
BstUI	CGCG	3 cut(s)	70, 72, 168
BstV1I	GCAGC	4 cut(s)	283, 344, 596, 2006
BstV2I	GAAGAC	3 cut(s)	747, 945, 2193
BstX2I	RGATCY	1 cut(s)	1234
BstYI	RGATCY	1 cut(s)	1234
Bsu15I	ATCGAT	1 cut(s)	2119
BsuRI	GGCC	9 cut(s)	5, 119, 203, 262, 1186, 1287, 1976, 2099, 2194
BsuTUI	ATCGAT	1 cut(s)	2119
BtgI	CCRYGG	2 cut(s)	654, 2177
BtgZI	GCGATG	1 cut(s)	183
BtsCI	GGATG	6 cut(s)	274, 427, 664, 1561, 1759, 2272
BtsI	GCAGTG	2 cut(s)	321, 2268
BtsIMutI	CAGTG	4 cut(s)	321, 1371, 1500, 2268
BveI	ACCTGC	1 cut(s)	1467
Cac8I	GCNNGC	6 cut(s)	84, 510, 877, 1718, 1870, 2355
CfoI	GCGC	8 cut(s)	72, 82, 91, 155, 168, 180, 1476, 2214
Cfr10I	RCCGGY	3 cut(s)	82, 149, 2203
Cfr13I	GGNCC	5 cut(s)	283, 476, 748, 1058, 1967
ClaI	ATCGAT	1 cut(s)	2119
CseI	GACGC	2 cut(s)	34, 133
Csp6I	GTAC	7 cut(s)	578, 1081, 1509, 1528, 1883, 1937, 2174
CviQI	GTAC	7 cut(s)	578, 1081, 1509, 1528, 1883, 1937, 2174
DdeI	CTNAG	7 cut(s)	7, 257, 843, 1462, 1595, 1809, 1823
DinI	GGCGCC	2 cut(s)	81, 154
DpnI	GATC	9 cut(s)	162, 174, 191, 972, 1017, 1236, 1245, 1422, 2122
DpnII	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
DraIII	CACNNNGTG	1 cut(s)	2279
DrdI	GACNNNNNNGTC	1 cut(s)	2195
DseDI	GACNNNNNNGTC	1 cut(s)	2195
EaeI	YGGCCR	1 cut(s)	2097
Eam1104I	CTCTTC	2 cut(s)	722, 1984
EarI	CTCTTC	2 cut(s)	722, 1984
EciI	GGCGGA	2 cut(s)	32, 112
Ecl136II	GAGCTC	1 cut(s)	512
Eco130I	CCWWGG	3 cut(s)	654, 1288, 2298
Eco147I	AGGCCT	2 cut(s)	262, 1186
Eco24I	GRGCYC	1 cut(s)	514
Eco47I	GGWCC	5 cut(s)	283, 476, 748, 1058, 1967
Eco53kI	GAGCTC	1 cut(s)	512
Eco57I	CTGAAG	3 cut(s)	1074, 1593, 2024
Eco72I	CACGTG	1 cut(s)	2081
Eco88I	CYCGRG	3 cut(s)	347, 591, 1970
EcoICRI	GAGCTC	1 cut(s)	512
EcoNI	CCTNNNNNAGG	1 cut(s)	1313
EcoRI	GAATTC	1 cut(s)	1428
EcoRII	CCWGG	7 cut(s)	767, 991, 1127, 1615, 1651, 1720, 1771
EcoT14I	CCWWGG	3 cut(s)	654, 1288, 2298
EcoT22I	ATGCAT	2 cut(s)	427, 1801
EcoT38I	GRGCYC	1 cut(s)	514
EgeI	GGCGCC	2 cut(s)	81, 154
EheI	GGCGCC	2 cut(s)	81, 154
ErhI	CCWWGG	3 cut(s)	654, 1288, 2298
Esp3I	CGTCTC	1 cut(s)	539
FalI	AAGNNNNNCTT	6 cut(s)	1272, 1304, 1566, 1598, 1981, 2013
FaqI	GGGAC	2 cut(s)	1149, 1953
FauNDI	CATATG	2 cut(s)	1159, 1228
FbaI	TGATCA	1 cut(s)	172
Fnu4HI	GCNGC	8 cut(s)	57, 78, 87, 201, 297, 333, 585, 1995
FokI	GGATG	6 cut(s)	261, 434, 671, 1568, 1766, 2279
FriOI	GRGCYC	1 cut(s)	514
Fsp4HI	GCNGC	8 cut(s)	57, 78, 87, 201, 297, 333, 585, 1995
FspBI	CTAG	3 cut(s)	416, 804, 2354
FspI	TGCGCA	1 cut(s)	1475
GlaI	GCGC	8 cut(s)	71, 81, 90, 154, 167, 179, 1475, 2213
GluI	GCNGC	8 cut(s)	57, 78, 87, 201, 297, 333, 585, 1995
GsuI	CTGGAG	7 cut(s)	357, 948, 1014, 1395, 1471, 1638, 1794
HaeII	RGCGCY	3 cut(s)	83, 156, 181
HaeIII	GGCC	9 cut(s)	5, 119, 203, 262, 1186, 1287, 1976, 2099, 2194
HapII	CCGG	7 cut(s)	83, 150, 1275, 1940, 2052, 2204, 2258
HgaI	GACGC	2 cut(s)	34, 133
HhaI	GCGC	8 cut(s)	72, 82, 91, 155, 168, 180, 1476, 2214
Hin1I	GRCGYC	4 cut(s)	26, 80, 144, 153
Hin6I	GCGC	8 cut(s)	70, 80, 89, 153, 166, 178, 1474, 2212
HinP1I	GCGC	8 cut(s)	70, 80, 89, 153, 166, 178, 1474, 2212
HincII	GTYRAC	2 cut(s)	1165, 1920
HindII	GTYRAC	2 cut(s)	1165, 1920
HindIII	AAGCTT	4 cut(s)	494, 947, 1063, 1931
HinfI	GANTC	6 cut(s)	50, 208, 1119, 1832, 2163, 2241
HpaI	GTTAAC	1 cut(s)	1920
HpaII	CCGG	7 cut(s)	83, 150, 1275, 1940, 2052, 2204, 2258
HphI	GGTGA	3 cut(s)	139, 937, 2099
Hpy166II	GTNNAC	6 cut(s)	476, 526, 599, 1165, 1789, 1920
Hpy188I	TCNGA	7 cut(s)	574, 628, 1837, 2162, 2219, 2343, 2366
Hpy8I	GTNNAC	6 cut(s)	476, 526, 599, 1165, 1789, 1920
Hpy99I	CGWCG	1 cut(s)	28
HpyAV	CCTTC	7 cut(s)	39, 228, 1049, 1176, 1309, 1479, 2084
HpyCH4IV	ACGT	3 cut(s)	405, 2080, 2172
HpyF3I	CTNAG	7 cut(s)	7, 257, 843, 1462, 1595, 1809, 1823
HpySE526I	ACGT	3 cut(s)	405, 2080, 2172
Hsp92I	GRCGYC	4 cut(s)	26, 80, 144, 153
HspAI	GCGC	8 cut(s)	70, 80, 89, 153, 166, 178, 1474, 2212
KasI	GGCGCC	2 cut(s)	79, 152
KroI	GCCGGC	1 cut(s)	82
KroNI	GCCGGC	1 cut(s)	84
Ksp22I	TGATCA	1 cut(s)	172
KspAI	GTTAAC	1 cut(s)	1920
Kzo9I	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
LguI	GCTCTTC	1 cut(s)	1984
LmnI	GCTCC	3 cut(s)	338, 805, 2209
Lsp1109I	GCAGC	4 cut(s)	283, 344, 596, 2006
MaeI	CTAG	3 cut(s)	416, 804, 2354
MaeII	ACGT	3 cut(s)	405, 2080, 2172
MaeIII	GTNAC	5 cut(s)	145, 848, 869, 1847, 2020
MalI	GATC	9 cut(s)	162, 174, 191, 972, 1017, 1236, 1245, 1422, 2122
MboI	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
MflI	RGATCY	1 cut(s)	1234
MhlI	GDGCHC	3 cut(s)	514, 554, 1609
MlsI	TGGCCA	1 cut(s)	2099
MluCI	AATT	7 cut(s)	1041, 1105, 1366, 1396, 1428, 1519, 1563
MluNI	TGGCCA	1 cut(s)	2099
Mly113I	GGCGCC	2 cut(s)	80, 153
MmeI	TCCRAC	4 cut(s)	126, 469, 2163, 2271
Mox20I	TGGCCA	1 cut(s)	2099
Mph1103I	ATGCAT	2 cut(s)	427, 1801
MreI	CGCCGGCG	1 cut(s)	82
MroNI	GCCGGC	1 cut(s)	82
MroXI	GAANNNNTTC	3 cut(s)	381, 633, 2046
MscI	TGGCCA	1 cut(s)	2099
MseI	TTAA	7 cut(s)	1074, 1337, 1578, 1758, 1902, 1919, 2109
MslI	CAYNNNNRTG	4 cut(s)	923, 1504, 1794, 2204
Msp20I	TGGCCA	1 cut(s)	2099
MspA1I	CMGCKG	3 cut(s)	335, 968, 2322
MspI	CCGG	7 cut(s)	83, 150, 1275, 1940, 2052, 2204, 2258
MvaI	CCWGG	7 cut(s)	769, 993, 1129, 1617, 1653, 1722, 1773
MvnI	CGCG	3 cut(s)	70, 72, 168
NaeI	GCCGGC	1 cut(s)	84
NarI	GGCGCC	2 cut(s)	80, 153
NciI	CCSGG	3 cut(s)	1276, 1941, 2052
NcoI	CCATGG	1 cut(s)	654
NdeI	CATATG	2 cut(s)	1159, 1228
NdeII	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
NgoMIV	GCCGGC	1 cut(s)	82
NheI	GCTAGC	1 cut(s)	2353
NlaIV	GGNNCC	6 cut(s)	81, 154, 285, 393, 1224, 1969
NmeAIII	GCCGAG	2 cut(s)	181, 484
NmuCI	GTSAC	3 cut(s)	145, 848, 1847
NsbI	TGCGCA	1 cut(s)	1475
NsiI	ATGCAT	2 cut(s)	427, 1801
NspI	RCATGY	2 cut(s)	584, 2286
NspV	TTCGAA	1 cut(s)	14
PaeR7I	CTCGAG	1 cut(s)	591
PasI	CCCWGGG	1 cut(s)	1128
PceI	AGGCCT	2 cut(s)	262, 1186
PciSI	GCTCTTC	1 cut(s)	1984
PcsI	WCGNNNNNNNCGW	4 cut(s)	20, 69, 511, 1891
PdiI	GCCGGC	1 cut(s)	84
PdmI	GAANNNNTTC	3 cut(s)	381, 633, 2046
PfeI	GAWTC	6 cut(s)	50, 208, 1119, 1832, 2163, 2241
PflMI	CCANNNNNTGG	2 cut(s)	1964, 2084
PfoI	TCCNGGA	2 cut(s)	991, 2050
PkrI	GCNGC	8 cut(s)	58, 79, 88, 202, 298, 334, 586, 1996
PluTI	GGCGCC	2 cut(s)	83, 156
PmaCI	CACGTG	1 cut(s)	2081
PmlI	CACGTG	1 cut(s)	2081
Ppu21I	YACGTR	2 cut(s)	2081, 2173
PshAI	GACNNNNGTC	1 cut(s)	143
Psp124BI	GAGCTC	1 cut(s)	514
Psp6I	CCWGG	7 cut(s)	767, 991, 1127, 1615, 1651, 1720, 1771
PspCI	CACGTG	1 cut(s)	2081
PspGI	CCWGG	7 cut(s)	767, 991, 1127, 1615, 1651, 1720, 1771
PspN4I	GGNNCC	6 cut(s)	81, 154, 285, 393, 1224, 1969
PspPI	GGNCC	5 cut(s)	283, 476, 748, 1058, 1967
PspXI	VCTCGAGB	1 cut(s)	591
PsuI	RGATCY	1 cut(s)	1234
PvuII	CAGCTG	2 cut(s)	335, 968
RsaI	GTAC	7 cut(s)	579, 1082, 1510, 1529, 1884, 1938, 2175
RsaNI	GTAC	7 cut(s)	578, 1081, 1509, 1528, 1883, 1937, 2174
RseI	CAYNNNNRTG	4 cut(s)	923, 1504, 1794, 2204
SacI	GAGCTC	1 cut(s)	514
SapI	GCTCTTC	1 cut(s)	1984
SaqAI	TTAA	7 cut(s)	1074, 1337, 1578, 1758, 1902, 1919, 2109
SatI	GCNGC	8 cut(s)	57, 78, 87, 201, 297, 333, 585, 1995
Sau3AI	GATC	9 cut(s)	160, 172, 189, 970, 1015, 1234, 1243, 1420, 2120
Sau96I	GGNCC	5 cut(s)	283, 476, 748, 1058, 1967
SduI	GDGCHC	3 cut(s)	514, 554, 1609
SfcI	CTRYAG	3 cut(s)	237, 835, 1188
SfoI	GGCGCC	2 cut(s)	81, 154
Sfr274I	CTCGAG	1 cut(s)	591
SfuI	TTCGAA	1 cut(s)	14
SgrAI	CRCCGGYG	2 cut(s)	82, 149
SinI	GGWCC	5 cut(s)	283, 476, 748, 1058, 1967
SlaI	CTCGAG	1 cut(s)	591
SmiMI	CAYNNNNRTG	4 cut(s)	923, 1504, 1794, 2204
SmlI	CTYRAG	1 cut(s)	591
SmoI	CTYRAG	1 cut(s)	591
Sse9I	AATT	7 cut(s)	1041, 1105, 1366, 1396, 1428, 1519, 1563
SseBI	AGGCCT	2 cut(s)	262, 1186
SsiI	CCGC	9 cut(s)	43, 56, 68, 77, 86, 123, 200, 419, 2322
SspDI	GGCGCC	2 cut(s)	79, 152
SspI	AATATT	1 cut(s)	2030
SspMI	CTAG	3 cut(s)	416, 804, 2354
SstI	GAGCTC	1 cut(s)	514
StuI	AGGCCT	2 cut(s)	262, 1186
StyI	CCWWGG	3 cut(s)	654, 1288, 2298
TaiI	ACGT	3 cut(s)	408, 2083, 2175
TaqI	TCGA	7 cut(s)	14, 514, 592, 1018, 1180, 1392, 2119
TasI	AATT	7 cut(s)	1041, 1105, 1366, 1396, 1428, 1519, 1563
TatI	WGTACW	2 cut(s)	577, 1508
TauI	GCSGC	4 cut(s)	59, 80, 89, 203
TfiI	GAWTC	6 cut(s)	50, 208, 1119, 1832, 2163, 2241
Tru1I	TTAA	7 cut(s)	1074, 1337, 1578, 1758, 1902, 1919, 2109
Tru9I	TTAA	7 cut(s)	1074, 1337, 1578, 1758, 1902, 1919, 2109
TscAI	CASTG	4 cut(s)	321, 1378, 1500, 2268
TseFI	GTSAC	3 cut(s)	145, 848, 1847
TseI	GCWGC	4 cut(s)	296, 332, 584, 1994
Tsp45I	GTSAC	3 cut(s)	145, 848, 1847
TspDTI	ATGAA	2 cut(s)	737, 2055
TspGWI	ACGGA	2 cut(s)	1900, 2253
TspRI	CASTG	4 cut(s)	321, 1378, 1500, 2268
Van91I	CCANNNNNTGG	2 cut(s)	1964, 2084
VpaK11BI	GGWCC	5 cut(s)	283, 476, 748, 1058, 1967
XagI	CCTNNNNNAGG	1 cut(s)	1313
XapI	RAATTY	3 cut(s)	1105, 1366, 1428
XceI	RCATGY	2 cut(s)	584, 2286
XcmI	CCANNNNNNNNNTGG	2 cut(s)	661, 1135
XhoI	CTCGAG	1 cut(s)	591
XmnI	GAANNNNTTC	3 cut(s)	381, 633, 2046
XspI	CTAG	3 cut(s)	416, 804, 2354
Zsp2I	ATGCAT	2 cut(s)	427, 1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.