Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005234.1

Orthogroup ID

OG0003041

Physical Location & Seq

Genomic Coordinates Reverse (-)

10350 .. 16040

Gene Structure 5691 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005234.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

atggccgcaactcaggaaaaagcgacgcctccttctacacctttatcctccaaacccattctccagcttcggaccgcctcctccgcatcatccgatccggcccaggatccgatctcaacccgaccctccgtcccgccgcccctcatccgacccctcgactccaccgctgccgccaaaggcctcccagtcatgttgagggctcaatccagccatcccttggagcctttatctgccgctgaaatctcggtagccgtggccaccgtcagggcagctggagcaacccctgaggtgagggatagtatgcgctttgttgaagtagctttggtagaaccagataagcgtgttgttgcattggcagatgcgtatttcttccctcctttccagccatcattgcttcccagaacaaaaggaggacctatgattcccagtaaacttcctccgaggcaagcgaggcttgtagtttataacaaaaagtcaaatgagacgagtgtttgggttgttgagctatcagaagttcatgctgcaactcgaggtggtcaccataggggtaaagtcatctcatccaaagttgttccagatgttcagcctcccatggatgctatggaatatgctgaatgtgaagctgttgtaaaggactatcctccatttcgggatgcaatgaagaagaggggtattgaagatttggacctcgtaatggtggatccatggtgcgcaggatatcacagtgaggctgatgctcctagccgcaggcttgctaaaccactgatcttctgtagaactgagagtgattgccctatggaaaatggttatgctcgtccagtggaaggaatccatgtactagttgatatgcaaaatatgtggaatttccgtattggctttacttcgagggaaggtttggttatctactctgttgcttatattgacggtagtcgaggccggaggcccgtggcccacaggttaagttttgttgagatggtggttccttacggagatccaaatgatccccactacaggaaaaatgcatttgatgctggggaagatgggctgggtaaaaatgcacattctcttaaaaagggttgtgattgtttaggttatatcaagtactttgatgcacactttacaaatttcactgggggtgttgaaacaattgagaattgtgtttgcttgcatgaggaggatcatggaatattatggaagcatcaggattggagaacaggtttagcagaagttcgacggtctagaaggctgacagtgtcttttatctgtacggtagctaactatgagtacggattttactggcatttttatcaggatgggaaaattgaagctgaggtgagacttacaggaattctaagcttaggtgcgcttcaaccaggagaaacccgaaagtatggtacaactattgcacctggactatatgctcctgtacatcaacacttttttgttgctcgtatggacatggcagttgatagtaagcctggtgaaacttttaatcaggtggttgaagtaaatgttaaagttgaagaaccaggaaagaacaatgttcataacaatgcattctatgctgaggagaaacttctgaaatcagaattgcaagcaatgcgtgattgcaatcctttatccgctcgccattggattgttaggcacacaagaaatgtcaaccggacaggacagctaacaggttacaagctggtacctggttcaaattgtttaccattagccggttctgaggcaaagtttctgagaagagctgcttttttgaagcataatctttgggtcacgtcctatgcacgtgatgaaatgtatcctggaggagaatttcctaatcaaaatccacgtattggggagggattagccacttgggttcagcaagatcggtctctggaagaagctgacattgttctttggtatgtatttggagtgacccacattcctcgactggaagactggccggtcatgcctgtggaacatattggttttacgctcatgccacatggtttctttaactgctcaacggcagtggacgtccctccgaatacatgtgagatggacctcaaggaaaatgagatggctgcaaaacctattcagaatggtcttatagccaagctctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

703

Amino Acids

78.37

Weight (kDa)

6.65

Isoelectric Point (pI)

45.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42490
fragaria_vesca	FvH4_2g01360 FvH4_2g01360 FvH4_2g01360 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090
malus_domestica	MD06G1166900.v1.1 MD13G1102300.v1.1 MD14G1172500.v1.1
prunus_persica	Prupe.1G243500_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1
pyrus_communis	pycom13g08940 pycom14g14400
rosa_chinensis	RchiOBHm_Chr4g0432841 RchiOBHm_Chr7g0192721
rosa_laevigata	RLG00000004334 RLG00000006809
rosa_multiflora	Rmu_sc0002040.1_g000015 Rmu_sc0005234.1_g000004
rosa_roxburghii	Rroxscaffold_3G00262720 Rroxscaffold_5G00374260
rosa_rugosa	Rorug04G0263100 Rorug07G0004200
rosa_samantha	Rh4AG317300 Rh4BG325500 Rh4CG340400 Rh4DG320700 Rh7DG131400
rosa_wichuraiana	Rw4G027600 Rw7G011050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	465
AasI	GACNNNNNNGTC	1 cut(s)	1952
AatII	GACGTC	1 cut(s)	2028
Acc16I	TGCGCA	1 cut(s)	712
Acc65I	GGTACC	1 cut(s)	1693
AccB1I	GGYRCC	1 cut(s)	1693
AccB7I	CCANNNNNTGG	2 cut(s)	217, 1841
AccBSI	CCGCTC	1 cut(s)	1625
AclWI	GGATC	8 cut(s)	89, 101, 114, 695, 708, 986, 995, 1185
AcoI	YGGCCR	3 cut(s)	3, 255, 1949
AcsI	RAATTY	4 cut(s)	862, 1123, 1347, 1817
AcvI	CACGTG	1 cut(s)	1793
AcyI	GRCGYC	2 cut(s)	26, 2025
AfaI	GTAC	7 cut(s)	837, 1103, 1267, 1286, 1396, 1428, 1695
AfiI	CCNNNNNNNGG	7 cut(s)	217, 264, 694, 824, 1011, 1721, 1841
AflIII	ACRYGT	1 cut(s)	2039
AgsI	TTSAA	9 cut(s)	314, 677, 1142, 1325, 1370, 1505, 1523, 1704, 1762
AhdI	GACNNNNNGTC	1 cut(s)	128
AhlI	ACTAGT	1 cut(s)	838
AjiI	CACGTC	1 cut(s)	1782
AjnI	CCWGG	7 cut(s)	102, 1372, 1408, 1477, 1528, 1696, 1807
Alw26I	GTCTC	3 cut(s)	476, 1330, 1884
AlwI	GGATC	8 cut(s)	89, 101, 114, 695, 708, 986, 995, 1185
Ama87I	CYCGRG	1 cut(s)	528
AoxI	GGCC	8 cut(s)	3, 99, 178, 255, 934, 941, 948, 1949
ApeKI	GCWGC	5 cut(s)	167, 269, 521, 1751, 2072
ApoI	RAATTY	4 cut(s)	862, 1123, 1347, 1817
Asp718I	GGTACC	1 cut(s)	1693
AspLEI	GCGC	3 cut(s)	306, 713, 1366
AspS9I	GGNCC	7 cut(s)	72, 100, 413, 685, 942, 949, 2050
AsuHPI	GGTGA	4 cut(s)	301, 530, 1345, 1493
AvaI	CYCGRG	1 cut(s)	528
AvaII	GGWCC	4 cut(s)	72, 413, 685, 2050
AxyI	CCTNAGG	1 cut(s)	285
BalI	TGGCCA	1 cut(s)	257
BamHI	GGATCC	2 cut(s)	106, 700
BanI	GGYRCC	1 cut(s)	1693
BanII	GRGCYC	1 cut(s)	202
BbrPI	CACGTG	1 cut(s)	1793
BbsI	GAAGAC	1 cut(s)	1950
BbvCI	CCTCAGC	2 cut(s)	1329, 1566
BbvI	GCAGC	5 cut(s)	154, 281, 508, 1738, 2059
BccI	CCATC	7 cut(s)	219, 394, 967, 1034, 1307, 2041, 2062
BceAI	ACGGC	2 cut(s)	236, 2031
BciT130I	CCWGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
BciVI	GTATCC	1 cut(s)	1815
BcoDI	GTCTC	3 cut(s)	476, 1330, 1884
BcuI	ACTAGT	1 cut(s)	838
BfaI	CTAG	3 cut(s)	741, 839, 1239
BfmI	CTRYAG	2 cut(s)	772, 1009
BfuI	GTATCC	1 cut(s)	1815
BmcAI	AGTACT	1 cut(s)	1103
Bme1390I	CCNGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
Bme18I	GGWCC	4 cut(s)	72, 413, 685, 2050
BmeRI	GACNNNNNGTC	1 cut(s)	128
BmeT110I	CYCGRG	1 cut(s)	528
BmgBI	CACGTC	1 cut(s)	1782
BmgT120I	GGNCC	7 cut(s)	72, 100, 413, 685, 942, 949, 2050
BmiI	GGNNCC	5 cut(s)	108, 222, 702, 981, 1695
BmrFI	CCNGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
BmrI	ACTGGG	3 cut(s)	179, 420, 1140
BmsI	GCATC	8 cut(s)	95, 349, 586, 643, 724, 1018, 1099, 1207
BmuI	ACTGGG	3 cut(s)	179, 420, 1140
BoxI	GACNNNNGTC	1 cut(s)	927
BpiI	GAAGAC	1 cut(s)	1950
BpmI	CTGGAG	3 cut(s)	47, 294, 1830
Bpu10I	CCTNAGC	3 cut(s)	1329, 1357, 1566
BpuEI	CTTGAG	1 cut(s)	2039
BsaAI	YACGTR	2 cut(s)	1793, 1838
BsaBI	GATNNNNATC	1 cut(s)	1611
BsaHI	GRCGYC	2 cut(s)	26, 2025
BsaI	GGTCTC	1 cut(s)	1884
BsaJI	CCNNGG	7 cut(s)	102, 216, 252, 440, 591, 704, 945
BsaWI	WCCGGW	1 cut(s)	1662
BsaXI	ACNNNNNCTCC	4 cut(s)	45, 75, 1201, 1231
Bsc4I	CCNNNNNNNGG	7 cut(s)	217, 264, 694, 824, 1011, 1721, 1841
Bse118I	RCCGGY	2 cut(s)	1721, 1951
Bse1I	ACTGG	7 cut(s)	185, 426, 818, 1135, 1301, 1944, 1952
Bse21I	CCTNAGG	1 cut(s)	285
Bse3DI	GCAATG	3 cut(s)	389, 663, 1605
Bse8I	GATNNNNATC	1 cut(s)	1611
BseBI	CCWGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
BseDI	CCNNGG	7 cut(s)	102, 216, 252, 440, 591, 704, 945
BseGI	GGATG	7 cut(s)	89, 144, 211, 560, 601, 658, 1318
BseJI	GATNNNNATC	1 cut(s)	1611
BseLI	CCNNNNNNNGG	7 cut(s)	217, 264, 694, 824, 1011, 1721, 1841
BseMI	GCAATG	3 cut(s)	389, 663, 1605
BseMII	CTCAG	7 cut(s)	26, 276, 771, 1320, 1557, 1719, 1733
BseNI	ACTGG	7 cut(s)	185, 426, 818, 1135, 1301, 1944, 1952
BseRI	GAGGAG	4 cut(s)	70, 1187, 1583, 1827
BseXI	GCAGC	5 cut(s)	154, 281, 508, 1738, 2059
BseYI	CCCAGC	2 cut(s)	1031, 1045
BshFI	GGCC	8 cut(s)	5, 101, 180, 257, 936, 943, 950, 1951
BshNI	GGYRCC	1 cut(s)	1693
BsiHKCI	CYCGRG	1 cut(s)	528
BsiSI	CCGG	5 cut(s)	98, 937, 1663, 1722, 1952
BslFI	GGGAC	2 cut(s)	116, 2012
BslI	CCNNNNNNNGG	7 cut(s)	217, 264, 694, 824, 1011, 1721, 1841
BsmAI	GTCTC	3 cut(s)	476, 1330, 1884
BsmBI	CGTCTC	1 cut(s)	476
BsmFI	GGGAC	2 cut(s)	116, 2012
BsmI	GAATGC	1 cut(s)	1556
BsnI	GGCC	8 cut(s)	5, 101, 180, 257, 936, 943, 950, 1951
Bso31I	GGTCTC	1 cut(s)	1884
BsoBI	CYCGRG	1 cut(s)	528
Bsp1286I	GDGCHC	1 cut(s)	202
Bsp1407I	TGTACA	1 cut(s)	1426
Bsp143I	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
Bsp19I	CCATGG	2 cut(s)	591, 704
BspANI	GGCC	8 cut(s)	5, 101, 180, 257, 936, 943, 950, 1951
BspCNI	CTCAG	7 cut(s)	25, 277, 772, 1321, 1558, 1720, 1734
BspLI	GGNNCC	5 cut(s)	108, 222, 702, 981, 1695
BspPI	GGATC	8 cut(s)	89, 101, 114, 695, 708, 986, 995, 1185
BspQI	GCTCTTC	1 cut(s)	1741
BspT107I	GGYRCC	1 cut(s)	1693
BspTNI	GGTCTC	1 cut(s)	1884
BsrBI	CCGCTC	1 cut(s)	1625
BsrDI	GCAATG	3 cut(s)	389, 663, 1605
BsrFI	RCCGGY	2 cut(s)	1721, 1951
BsrGI	TGTACA	1 cut(s)	1426
BsrI	ACTGG	7 cut(s)	185, 426, 818, 1135, 1301, 1944, 1952
BssAI	RCCGGY	2 cut(s)	1721, 1951
BssECI	CCNNGG	7 cut(s)	102, 216, 252, 440, 591, 704, 945
BssMI	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
BssNI	GRCGYC	2 cut(s)	26, 2025
BssT1I	CCWWGG	3 cut(s)	216, 591, 704
Bst2UI	CCWGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
Bst4CI	ACNGT	6 cut(s)	262, 725, 926, 1236, 1252, 1270
Bst6I	CTCTTC	2 cut(s)	659, 1741
BstACI	GRCGYC	2 cut(s)	26, 2025
BstAPI	GCANNNNNTGC	3 cut(s)	1028, 1562, 1600
BstAUI	TGTACA	1 cut(s)	1426
BstBAI	YACGTR	2 cut(s)	1793, 1838
BstC8I	GCNNGC	6 cut(s)	447, 749, 753, 1166, 1596, 1627
BstDEI	CTNAG	9 cut(s)	12, 285, 780, 1329, 1352, 1357, 1566, 1728, 1742
BstDSI	CCRYGG	4 cut(s)	252, 591, 704, 945
BstEII	GGTNACC	1 cut(s)	536
BstF5I	GGATG	7 cut(s)	89, 144, 211, 560, 601, 658, 1318
BstHHI	GCGC	3 cut(s)	306, 713, 1366
BstKTI	GATC	9 cut(s)	97, 109, 114, 703, 768, 994, 1003, 1180, 1876
BstMAI	GTCTC	3 cut(s)	476, 1330, 1884
BstMBI	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 275, 391, 451, 1028, 1562, 1600, 1957
BstNI	CCWGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
BstNSI	RCATGY	1 cut(s)	2043
BstPAI	GACNNNNGTC	1 cut(s)	927
BstPI	GGTNACC	1 cut(s)	536
BstSCI	CCNGG	7 cut(s)	102, 1372, 1408, 1477, 1528, 1696, 1807
BstSFI	CTRYAG	2 cut(s)	772, 1009
BstV1I	GCAGC	5 cut(s)	154, 281, 508, 1738, 2059
BstV2I	GAAGAC	1 cut(s)	1950
BstX2I	RGATCY	3 cut(s)	106, 700, 991
BstYI	RGATCY	3 cut(s)	106, 700, 991
Bsu36I	CCTNAGG	1 cut(s)	285
BsuI	GTATCC	1 cut(s)	1815
BsuRI	GGCC	8 cut(s)	5, 101, 180, 257, 936, 943, 950, 1951
BtgI	CCRYGG	4 cut(s)	252, 591, 704, 945
BtrI	CACGTC	1 cut(s)	1782
BtsCI	GGATG	7 cut(s)	89, 144, 211, 560, 601, 658, 1318
BtsI	GCAGTG	1 cut(s)	2025
BtsIMutI	CAGTG	6 cut(s)	730, 761, 825, 1128, 1257, 2025
Cac8I	GCNNGC	6 cut(s)	447, 749, 753, 1166, 1596, 1627
CfoI	GCGC	3 cut(s)	306, 713, 1366
Cfr10I	RCCGGY	2 cut(s)	1721, 1951
Cfr13I	GGNCC	7 cut(s)	72, 100, 413, 685, 942, 949, 2050
CpoI	CGGWCCG	1 cut(s)	72
CseI	GACGC	1 cut(s)	34
CsiI	ACCWGGT	1 cut(s)	1696
Csp6I	GTAC	7 cut(s)	836, 1102, 1266, 1285, 1395, 1427, 1694
CspCI	CAANNNNNGTGG	4 cut(s)	839, 874, 2001, 2036
CspI	CGGWCCG	1 cut(s)	72
CviQI	GTAC	7 cut(s)	836, 1102, 1266, 1285, 1395, 1427, 1694
DdeI	CTNAG	9 cut(s)	12, 285, 780, 1329, 1352, 1357, 1566, 1728, 1742
DpnI	GATC	9 cut(s)	96, 108, 113, 702, 767, 993, 1002, 1179, 1875
DpnII	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
DrdI	GACNNNNNNGTC	1 cut(s)	1952
DriI	GACNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	1952
EaeI	YGGCCR	3 cut(s)	3, 255, 1949
Eam1104I	CTCTTC	2 cut(s)	659, 1741
Eam1105I	GACNNNNNGTC	1 cut(s)	128
EarI	CTCTTC	2 cut(s)	659, 1741
Eco130I	CCWWGG	3 cut(s)	216, 591, 704
Eco147I	AGGCCT	1 cut(s)	180
Eco24I	GRGCYC	1 cut(s)	202
Eco31I	GGTCTC	1 cut(s)	1884
Eco32I	GATATC	1 cut(s)	719
Eco47I	GGWCC	4 cut(s)	72, 413, 685, 2050
Eco72I	CACGTG	1 cut(s)	1793
Eco81I	CCTNAGG	1 cut(s)	285
Eco88I	CYCGRG	1 cut(s)	528
Eco91I	GGTNACC	1 cut(s)	536
EcoO109I	RGGNCCY	1 cut(s)	413
EcoO65I	GGTNACC	1 cut(s)	536
EcoRI	GAATTC	1 cut(s)	1347
EcoRII	CCWGG	7 cut(s)	102, 1372, 1408, 1477, 1528, 1696, 1807
EcoRV	GATATC	1 cut(s)	719
EcoT14I	CCWWGG	3 cut(s)	216, 591, 704
EcoT22I	ATGCAT	2 cut(s)	1024, 1558
EcoT38I	GRGCYC	1 cut(s)	202
ErhI	CCWWGG	3 cut(s)	216, 591, 704
Esp3I	CGTCTC	1 cut(s)	476
FalI	AAGNNNNNCTT	4 cut(s)	438, 470, 1738, 1770
FaqI	GGGAC	2 cut(s)	116, 2012
FauI	CCCGC	1 cut(s)	141
FokI	GGATG	7 cut(s)	76, 131, 198, 547, 608, 665, 1325
FriOI	GRGCYC	1 cut(s)	202
FspBI	CTAG	3 cut(s)	741, 839, 1239
FspI	TGCGCA	1 cut(s)	712
GlaI	GCGC	3 cut(s)	305, 712, 1365
GsaI	CCCAGC	2 cut(s)	1035, 1049
GsuI	CTGGAG	3 cut(s)	47, 294, 1830
HaeIII	GGCC	8 cut(s)	5, 101, 180, 257, 936, 943, 950, 1951
HapII	CCGG	5 cut(s)	98, 937, 1663, 1722, 1952
HgaI	GACGC	1 cut(s)	34
HhaI	GCGC	3 cut(s)	306, 713, 1366
Hin1I	GRCGYC	2 cut(s)	26, 2025
Hin6I	GCGC	3 cut(s)	304, 711, 1364
HinP1I	GCGC	3 cut(s)	304, 711, 1364
HincII	GTYRAC	1 cut(s)	1660
HindII	GTYRAC	1 cut(s)	1660
HindIII	AAGCTT	1 cut(s)	1354
HinfI	GANTC	3 cut(s)	158, 421, 828
HpaII	CCGG	5 cut(s)	98, 937, 1663, 1722, 1952
HphI	GGTGA	4 cut(s)	301, 530, 1345, 1493
Hpy166II	GTNNAC	4 cut(s)	431, 1660, 1712, 2023
Hpy188III	TCNNGA	7 cut(s)	14, 575, 650, 1202, 1239, 1310, 1883
Hpy8I	GTNNAC	4 cut(s)	431, 1660, 1712, 2023
Hpy99I	CGWCG	2 cut(s)	28, 1236
HpyAV	CCTTC	4 cut(s)	42, 818, 884, 1236
HpyCH4III	ACNGT	6 cut(s)	262, 725, 926, 1236, 1252, 1270
HpyCH4IV	ACGT	4 cut(s)	1781, 1792, 1837, 2025
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 275, 391, 451, 1028, 1562, 1600, 1957
HpyF3I	CTNAG	9 cut(s)	12, 285, 780, 1329, 1352, 1357, 1566, 1728, 1742
HpySE526I	ACGT	4 cut(s)	1781, 1792, 1837, 2025
Hsp92I	GRCGYC	2 cut(s)	26, 2025
HspAI	GCGC	3 cut(s)	304, 711, 1364
KpnI	GGTACC	1 cut(s)	1697
Kzo9I	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
LguI	GCTCTTC	1 cut(s)	1741
LmnI	GCTCC	4 cut(s)	220, 275, 742, 1426
Lsp1109I	GCAGC	5 cut(s)	154, 281, 508, 1738, 2059
LweI	GCATC	8 cut(s)	95, 349, 586, 643, 724, 1018, 1099, 1207
MabI	ACCWGGT	1 cut(s)	1696
MaeI	CTAG	3 cut(s)	741, 839, 1239
MaeII	ACGT	4 cut(s)	1781, 1792, 1837, 2025
MaeIII	GTNAC	4 cut(s)	536, 1682, 1777, 1921
MalI	GATC	9 cut(s)	96, 108, 113, 702, 767, 993, 1002, 1179, 1875
MbiI	CCGCTC	1 cut(s)	1625
MboI	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	3 cut(s)	106, 700, 991
MhlI	GDGCHC	1 cut(s)	202
MlsI	TGGCCA	1 cut(s)	257
MluCI	AATT	9 cut(s)	862, 1123, 1146, 1153, 1320, 1347, 1589, 1705, 1817
MluNI	TGGCCA	1 cut(s)	257
MlyI	GAGTC	1 cut(s)	152
MmeI	TCCRAC	1 cut(s)	172
Mox20I	TGGCCA	1 cut(s)	257
Mph1103I	ATGCAT	2 cut(s)	1024, 1558
MscI	TGGCCA	1 cut(s)	257
MseI	TTAA	5 cut(s)	959, 1068, 1491, 1515, 2004
MslI	CAYNNNNRTG	2 cut(s)	1551, 1961
Msp20I	TGGCCA	1 cut(s)	257
MspA1I	CMGCKG	3 cut(s)	167, 236, 272
MspI	CCGG	5 cut(s)	98, 937, 1663, 1722, 1952
MspR9I	CCNGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
MunI	CAATTG	1 cut(s)	1146
Mva1269I	GAATGC	1 cut(s)	1556
MvaI	CCWGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
MwoI	GCNNNNNNNGC	8 cut(s)	83, 275, 391, 451, 1028, 1562, 1600, 1957
NcoI	CCATGG	2 cut(s)	591, 704
NdeII	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
NlaIV	GGNNCC	5 cut(s)	108, 222, 702, 981, 1695
NmuCI	GTSAC	3 cut(s)	536, 1777, 1921
NsbI	TGCGCA	1 cut(s)	712
NsiI	ATGCAT	2 cut(s)	1024, 1558
NspI	RCATGY	1 cut(s)	2043
PaeR7I	CTCGAG	1 cut(s)	528
PceI	AGGCCT	1 cut(s)	180
PciI	ACATGT	1 cut(s)	2039
PciSI	GCTCTTC	1 cut(s)	1741
PctI	GAATGC	1 cut(s)	1556
PfeI	GAWTC	2 cut(s)	421, 828
PflFI	GACNNNGTC	1 cut(s)	1252
PflMI	CCANNNNNTGG	2 cut(s)	217, 1841
PfoI	TCCNGGA	1 cut(s)	1807
PleI	GAGTC	1 cut(s)	152
PmaCI	CACGTG	1 cut(s)	1793
PmlI	CACGTG	1 cut(s)	1793
PpsI	GAGTC	1 cut(s)	152
Ppu21I	YACGTR	2 cut(s)	1793, 1838
PpuMI	RGGWCCY	1 cut(s)	413
PscI	ACATGT	1 cut(s)	2039
PshAI	GACNNNNGTC	1 cut(s)	927
PsiI	TTATAA	1 cut(s)	465
Psp5II	RGGWCCY	1 cut(s)	413
Psp6I	CCWGG	7 cut(s)	102, 1372, 1408, 1477, 1528, 1696, 1807
PspCI	CACGTG	1 cut(s)	1793
PspEI	GGTNACC	1 cut(s)	536
PspFI	CCCAGC	2 cut(s)	1031, 1045
PspGI	CCWGG	7 cut(s)	102, 1372, 1408, 1477, 1528, 1696, 1807
PspN4I	GGNNCC	5 cut(s)	108, 222, 702, 981, 1695
PspPI	GGNCC	7 cut(s)	72, 100, 413, 685, 942, 949, 2050
PspPPI	RGGWCCY	1 cut(s)	413
PspXI	VCTCGAGB	1 cut(s)	528
PsuI	RGATCY	3 cut(s)	106, 700, 991
PsyI	GACNNNGTC	1 cut(s)	1252
PvuII	CAGCTG	1 cut(s)	272
RsaI	GTAC	7 cut(s)	837, 1103, 1267, 1286, 1396, 1428, 1695
RsaNI	GTAC	7 cut(s)	836, 1102, 1266, 1285, 1395, 1427, 1694
RseI	CAYNNNNRTG	2 cut(s)	1551, 1961
Rsr2I	CGGWCCG	1 cut(s)	72
RsrII	CGGWCCG	1 cut(s)	72
SapI	GCTCTTC	1 cut(s)	1741
SaqAI	TTAA	5 cut(s)	959, 1068, 1491, 1515, 2004
Sau3AI	GATC	9 cut(s)	94, 106, 111, 700, 765, 991, 1000, 1177, 1873
Sau96I	GGNCC	7 cut(s)	72, 100, 413, 685, 942, 949, 2050
ScaI	AGTACT	1 cut(s)	1103
SchI	GAGTC	1 cut(s)	152
ScrFI	CCNGG	7 cut(s)	104, 1374, 1410, 1479, 1530, 1698, 1809
SduI	GDGCHC	1 cut(s)	202
SexAI	ACCWGGT	1 cut(s)	1696
SfaNI	GCATC	8 cut(s)	95, 349, 586, 643, 724, 1018, 1099, 1207
SfcI	CTRYAG	2 cut(s)	772, 1009
Sfr274I	CTCGAG	1 cut(s)	528
SinI	GGWCC	4 cut(s)	72, 413, 685, 2050
SlaI	CTCGAG	1 cut(s)	528
SmiMI	CAYNNNNRTG	2 cut(s)	1551, 1961
SmlI	CTYRAG	2 cut(s)	528, 2054
SmoI	CTYRAG	2 cut(s)	528, 2054
SpeI	ACTAGT	1 cut(s)	838
Sse9I	AATT	9 cut(s)	862, 1123, 1146, 1153, 1320, 1347, 1589, 1705, 1817
SseBI	AGGCCT	1 cut(s)	180
SspI	AATATT	1 cut(s)	1188
SspMI	CTAG	3 cut(s)	741, 839, 1239
StuI	AGGCCT	1 cut(s)	180
StyD4I	CCNGG	7 cut(s)	102, 1372, 1408, 1477, 1528, 1696, 1807
StyI	CCWWGG	3 cut(s)	216, 591, 704
TaaI	ACNGT	6 cut(s)	262, 725, 926, 1236, 1252, 1270
TaiI	ACGT	4 cut(s)	1784, 1795, 1840, 2028
TaqI	TCGA	6 cut(s)	156, 529, 884, 931, 1231, 1936
TaqII	GACCGA	1 cut(s)	1866
TasI	AATT	9 cut(s)	862, 1123, 1146, 1153, 1320, 1347, 1589, 1705, 1817
TatI	WGTACW	3 cut(s)	835, 1101, 1426
TauI	GCSGC	5 cut(s)	8, 139, 173, 236, 747
TfiI	GAWTC	2 cut(s)	421, 828
Tru1I	TTAA	5 cut(s)	959, 1068, 1491, 1515, 2004
Tru9I	TTAA	5 cut(s)	959, 1068, 1491, 1515, 2004
TscAI	CASTG	6 cut(s)	730, 768, 825, 1135, 1257, 2025
TseFI	GTSAC	3 cut(s)	536, 1777, 1921
TseI	GCWGC	5 cut(s)	167, 269, 521, 1751, 2072
Tsp45I	GTSAC	3 cut(s)	536, 1777, 1921
TspDTI	ATGAA	4 cut(s)	506, 674, 1535, 1812
TspGWI	ACGGA	4 cut(s)	118, 857, 1002, 1302
TspRI	CASTG	6 cut(s)	730, 768, 825, 1135, 1257, 2025
Tth111I	GACNNNGTC	1 cut(s)	1252
Van91I	CCANNNNNTGG	2 cut(s)	217, 1841
VpaK11BI	GGWCC	4 cut(s)	72, 413, 685, 2050
XapI	RAATTY	4 cut(s)	862, 1123, 1347, 1817
XbaI	TCTAGA	1 cut(s)	1238
XceI	RCATGY	1 cut(s)	2043
XcmI	CCANNNNNNNNNTGG	2 cut(s)	214, 598
XhoI	CTCGAG	1 cut(s)	528
XspI	CTAG	3 cut(s)	741, 839, 1239
ZraI	GACGTC	1 cut(s)	2026
ZrmI	AGTACT	1 cut(s)	1103
Zsp2I	ATGCAT	2 cut(s)	1024, 1558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.