Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0003041

Physical Location & Seq

Genomic Coordinates Reverse (-)

62739366 .. 62745169

Gene Structure 5804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG317300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGTTGAGGGCTCAATCCAGCCATCCCTTGGAGCCTTTATCTGCCGCTGAAATCTCGGTGGCCGTGGCCACTGTCAGGGCAGCTGGAGCAACCCCTGAGGTGAGGGATAGTATGCGCTTTGTTGAAGTAGCTTTGGTAGAACCAGATAAGCGTGTTGTTGCATTGGCAGATGCGTATTTCTTCCCTCCTTTCCAGCCATCATTGCTTCCCAGAACAAAAGGAGGACCTATGATTCCCAGTAAACTTCCTCCGAGGCAAGCGAGGCTTGTAGTTTATAACAAAAAGTCAAATGAGACGAGTGTTTGGGTTGTTGAGCTATCAGAAGTTCATGCTGCAACTCGAGGTGGTCACCATAGGGGTAAAGTCATCTCATCCAAAGTTGTTCCAGATGTTCAGCCTCCCATGGATGCTATGGAATATGCTGAATGTGAAGCTGTTGTAAAGGACTATCCTCCATTTCGGGATGCAATGAAGAAGAGGGGTATTGAAGATTTGGACCTCGTAATGGTGGATCCATGGTGCGCAGGATATCACAGTGAGGCTGATGCTCCTAGCCGCAGGCTTGCTAAACCACTTATCTTCTGTAGAACTGAGAGTGATTGCCCTATGGAAAATGGTTATGCTCGTCCAGTGGAAGGAATCCATGTACTAGTTGACATGCAAAATATGGTTGTTCTGGAGTTTGAAGACCGTAAACTTGTTCCCCTGCCTCCTGCTGATCCTTTGAGAAATTATACTTCTGGTGAAACACGAGGAGGTGTTGATCGAAGTGATGTGAAACCCCTAAAGATAGTTCAGCCTGAAGGGCCAAGTTTTCGTGTTAATGGGCACTTTGTTGAATGGCAGAAGTGGAATTTCCGTATTGGCTTTACTTCGAGGGAAGGTTTGGTTATCTACTCTGTTGCTTATATTGACGGTAGTCGAGGCCGGAGGCCCGTGGCCCACAGGTTAAGTTTTGTTGAGATGGTGGTTCCTTATGGAGATCCAAATGATCCCCACTACAGGAAAAATGCATTTGATGCTGGGGAAGATGGGCTGGGTAAAAATGCACATTCTCTTAAAAAGGGTTGTGATTGTTTAGGTTATATCAAGTACTTTGATGCACACTTTACAAATTTCACTGGGGGTGTTGAAACAATTGAGAATTGTGTTTGCTTGCATGAGGAGGATCATGGAATATTATGGAAGCATCAGGATTGGAGAACAGGTTTAGCAGAAGTTCGACGGTCTAGAAGGCTGACAGTGTCTTTTATCTGTACGGTAGCTAACTATGAGTACGGATTTTACTGGCATTTTTATCAGGATGGGAAAATTGAAGCTGAGGTGAGACTTACAGGAATTCTAAGCTTAGGTGCGCTTCAACCAGGAGAAACCCGAAAGTATGGTACAACTATTGCACCTGGACTATATGCTCCTGTACATCAACACTTTTTTGTTGCTCGTATGGACATGGCAGTTGATAGTAAGCCTGGTGAAACTTTTAATCAGGTGGTTGAAGTAAATGTTAAAGTTGAAGAACCAGGAAAGAACAATGTTCATAACAATGCATTCTATGCTGAGGAGAAACTTCTGAAATCAGAATTGCAAGCAATGCGTGATTGTAATCCTTTATCTGCTCGCCATTGGATTGTAAGACAGAATGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

549

Amino Acids

61.74

Weight (kDa)

6.69

Isoelectric Point (pI)

42.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN3	PF02728	133 - 236	5.8e-28	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	262 - 545	2.9e-107	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42490
fragaria_vesca	FvH4_2g01360 FvH4_2g01360 FvH4_2g01360 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090
malus_domestica	MD06G1166900.v1.1 MD13G1102300.v1.1 MD14G1172500.v1.1
prunus_persica	Prupe.1G243500_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1
pyrus_communis	pycom13g08940 pycom14g14400
rosa_chinensis	RchiOBHm_Chr4g0432841 RchiOBHm_Chr7g0192721
rosa_laevigata	RLG00000004334 RLG00000006809
rosa_multiflora	Rmu_sc0002040.1_g000015 Rmu_sc0005234.1_g000004
rosa_roxburghii	Rroxscaffold_3G00262720 Rroxscaffold_5G00374260
rosa_rugosa	Rorug04G0263100 Rorug07G0004200
rosa_samantha	Rh4AG317300 Rh4BG325500 Rh4CG340400 Rh4DG320700 Rh7DG131400
rosa_wichuraiana	Rw4G027600 Rw7G011050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	276
Acc16I	TGCGCA	1 cut(s)	523
AccB7I	CCANNNNNTGG	1 cut(s)	28
AciI	CCGC	2 cut(s)	45, 556
AclWI	GGATC	6 cut(s)	506, 519, 713, 977, 986, 1176
AcoI	YGGCCR	2 cut(s)	60, 66
AcsI	RAATTY	3 cut(s)	853, 1114, 1338
AcuI	CTGAAG	1 cut(s)	822
AfaI	GTAC	6 cut(s)	648, 1094, 1258, 1277, 1387, 1419
AfiI	CCNNNNNNNGG	5 cut(s)	28, 75, 505, 635, 1002
AgsI	TTSAA	9 cut(s)	125, 488, 686, 839, 1133, 1316, 1361, 1496, 1514
AhlI	ACTAGT	1 cut(s)	649
AjnI	CCWGG	4 cut(s)	1363, 1399, 1468, 1519
AluBI	AGCT	7 cut(s)	83, 131, 316, 434, 1265, 1319, 1347
AluI	AGCT	7 cut(s)	83, 131, 316, 434, 1265, 1319, 1347
Alw26I	GTCTC	2 cut(s)	287, 1321
AlwI	GGATC	6 cut(s)	506, 519, 713, 977, 986, 1176
Ama87I	CYCGRG	1 cut(s)	339
AoxI	GGCC	6 cut(s)	60, 66, 806, 925, 932, 939
ApeKI	GCWGC	2 cut(s)	80, 332
ApoI	RAATTY	3 cut(s)	853, 1114, 1338
AspLEI	GCGC	3 cut(s)	117, 524, 1357
AspS9I	GGNCC	5 cut(s)	224, 496, 806, 933, 940
AsuHPI	GGTGA	5 cut(s)	112, 341, 755, 1336, 1484
AvaI	CYCGRG	1 cut(s)	339
AvaII	GGWCC	2 cut(s)	224, 496
AxyI	CCTNAGG	1 cut(s)	96
BaeGI	GKGCMC	1 cut(s)	831
BalI	TGGCCA	1 cut(s)	68
BamHI	GGATCC	1 cut(s)	511
BanII	GRGCYC	1 cut(s)	13
BauI	CACGAG	1 cut(s)	750
BbsI	GAAGAC	1 cut(s)	693
BbvCI	CCTCAGC	2 cut(s)	1320, 1557
BbvI	GCAGC	2 cut(s)	92, 319
BccI	CCATC	5 cut(s)	30, 205, 958, 1025, 1298
BceAI	ACGGC	1 cut(s)	47
BciT130I	CCWGG	4 cut(s)	1365, 1401, 1470, 1521
BcoDI	GTCTC	2 cut(s)	287, 1321
BcuI	ACTAGT	1 cut(s)	649
BfaI	CTAG	3 cut(s)	552, 650, 1230
BfmI	CTRYAG	2 cut(s)	583, 1000
BglI	GCCNNNNNGGC	1 cut(s)	805
BisI	GCNGC	4 cut(s)	45, 81, 333, 556
BlsI	GCNGC	4 cut(s)	46, 82, 334, 557
BmcAI	AGTACT	1 cut(s)	1094
Bme1390I	CCNGG	4 cut(s)	1365, 1401, 1470, 1521
Bme18I	GGWCC	2 cut(s)	224, 496
BmeT110I	CYCGRG	1 cut(s)	339
BmgT120I	GGNCC	5 cut(s)	224, 496, 806, 933, 940
BmiI	GGNNCC	3 cut(s)	33, 513, 972
BmrFI	CCNGG	4 cut(s)	1365, 1401, 1470, 1521
BmrI	ACTGGG	2 cut(s)	231, 1131
BmsI	GCATC	7 cut(s)	160, 397, 454, 535, 1009, 1090, 1198
BmuI	ACTGGG	2 cut(s)	231, 1131
BoxI	GACNNNNGTC	1 cut(s)	918
BpiI	GAAGAC	1 cut(s)	693
BpmI	CTGGAG	2 cut(s)	105, 698
Bpu10I	CCTNAGC	3 cut(s)	1320, 1348, 1557
BsaBI	GATNNNNATC	1 cut(s)	1602
BsaJI	CCNNGG	6 cut(s)	27, 63, 251, 402, 515, 936
BsaXI	ACNNNNNCTCC	2 cut(s)	1192, 1222
Bsc4I	CCNNNNNNNGG	5 cut(s)	28, 75, 505, 635, 1002
Bse1I	ACTGG	4 cut(s)	237, 629, 1126, 1292
Bse21I	CCTNAGG	1 cut(s)	96
Bse3DI	GCAATG	3 cut(s)	200, 474, 1596
Bse8I	GATNNNNATC	1 cut(s)	1602
BseBI	CCWGG	4 cut(s)	1365, 1401, 1470, 1521
BseDI	CCNNGG	6 cut(s)	27, 63, 251, 402, 515, 936
BseGI	GGATG	5 cut(s)	22, 371, 412, 469, 1309
BseJI	GATNNNNATC	1 cut(s)	1602
BseLI	CCNNNNNNNGG	5 cut(s)	28, 75, 505, 635, 1002
BseMI	GCAATG	3 cut(s)	200, 474, 1596
BseMII	CTCAG	4 cut(s)	87, 582, 1311, 1548
BseNI	ACTGG	4 cut(s)	237, 629, 1126, 1292
BseRI	GAGGAG	3 cut(s)	768, 1178, 1574
BseSI	GKGCMC	1 cut(s)	831
BseXI	GCAGC	2 cut(s)	92, 319
BseYI	CCCAGC	2 cut(s)	1022, 1036
BshFI	GGCC	6 cut(s)	62, 68, 808, 927, 934, 941
BsiHKCI	CYCGRG	1 cut(s)	339
BsiSI	CCGG	1 cut(s)	928
BslI	CCNNNNNNNGG	5 cut(s)	28, 75, 505, 635, 1002
BsmAI	GTCTC	2 cut(s)	287, 1321
BsmBI	CGTCTC	1 cut(s)	287
BsmI	GAATGC	2 cut(s)	1547, 1645
BsnI	GGCC	6 cut(s)	62, 68, 808, 927, 934, 941
BsoBI	CYCGRG	1 cut(s)	339
Bsp1286I	GDGCHC	2 cut(s)	13, 831
Bsp1407I	TGTACA	1 cut(s)	1417
Bsp143I	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
Bsp19I	CCATGG	2 cut(s)	402, 515
BspACI	CCGC	2 cut(s)	45, 556
BspANI	GGCC	6 cut(s)	62, 68, 808, 927, 934, 941
BspCNI	CTCAG	4 cut(s)	88, 583, 1312, 1549
BspLI	GGNNCC	3 cut(s)	33, 513, 972
BspPI	GGATC	6 cut(s)	506, 519, 713, 977, 986, 1176
BsrDI	GCAATG	3 cut(s)	200, 474, 1596
BsrGI	TGTACA	1 cut(s)	1417
BsrI	ACTGG	4 cut(s)	237, 629, 1126, 1292
BssECI	CCNNGG	6 cut(s)	27, 63, 251, 402, 515, 936
BssMI	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
BssSI	CACGAG	1 cut(s)	750
BssT1I	CCWWGG	3 cut(s)	27, 402, 515
Bst2BI	CACGAG	1 cut(s)	750
Bst2UI	CCWGG	4 cut(s)	1365, 1401, 1470, 1521
Bst4CI	ACNGT	7 cut(s)	73, 536, 692, 917, 1227, 1243, 1261
Bst6I	CTCTTC	1 cut(s)	470
BstAPI	GCANNNNNTGC	3 cut(s)	1019, 1553, 1591
BstAUI	TGTACA	1 cut(s)	1417
BstC8I	GCNNGC	6 cut(s)	258, 560, 564, 1157, 1587, 1618
BstDEI	CTNAG	6 cut(s)	96, 591, 1320, 1343, 1348, 1557
BstDSI	CCRYGG	4 cut(s)	63, 402, 515, 936
BstEII	GGTNACC	1 cut(s)	347
BstF5I	GGATG	5 cut(s)	22, 371, 412, 469, 1309
BstHHI	GCGC	3 cut(s)	117, 524, 1357
BstKTI	GATC	6 cut(s)	514, 721, 766, 985, 994, 1171
BstMAI	GTCTC	2 cut(s)	287, 1321
BstMBI	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
BstMWI	GCNNNNNNNGC	7 cut(s)	86, 202, 262, 805, 1019, 1553, 1591
BstNI	CCWGG	4 cut(s)	1365, 1401, 1470, 1521
BstNSI	RCATGY	1 cut(s)	661
BstPAI	GACNNNNGTC	1 cut(s)	918
BstPI	GGTNACC	1 cut(s)	347
BstSCI	CCNGG	4 cut(s)	1363, 1399, 1468, 1519
BstSFI	CTRYAG	2 cut(s)	583, 1000
BstSLI	GKGCMC	1 cut(s)	831
BstV1I	GCAGC	2 cut(s)	92, 319
BstV2I	GAAGAC	1 cut(s)	693
BstX2I	RGATCY	2 cut(s)	511, 982
BstYI	RGATCY	2 cut(s)	511, 982
Bsu36I	CCTNAGG	1 cut(s)	96
BsuRI	GGCC	6 cut(s)	62, 68, 808, 927, 934, 941
BtgI	CCRYGG	4 cut(s)	63, 402, 515, 936
BtsCI	GGATG	5 cut(s)	22, 371, 412, 469, 1309
BtsIMutI	CAGTG	5 cut(s)	69, 541, 636, 1119, 1248
Cac8I	GCNNGC	6 cut(s)	258, 560, 564, 1157, 1587, 1618
CfoI	GCGC	3 cut(s)	117, 524, 1357
Cfr13I	GGNCC	5 cut(s)	224, 496, 806, 933, 940
Csp6I	GTAC	6 cut(s)	647, 1093, 1257, 1276, 1386, 1418
CviAII	CATG	8 cut(s)	329, 403, 516, 644, 658, 1160, 1172, 1450
CviQI	GTAC	6 cut(s)	647, 1093, 1257, 1276, 1386, 1418
DdeI	CTNAG	6 cut(s)	96, 591, 1320, 1343, 1348, 1557
DpnI	GATC	6 cut(s)	513, 720, 765, 984, 993, 1170
DpnII	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
EaeI	YGGCCR	2 cut(s)	60, 66
Eam1104I	CTCTTC	1 cut(s)	470
EarI	CTCTTC	1 cut(s)	470
Eco130I	CCWWGG	3 cut(s)	27, 402, 515
Eco24I	GRGCYC	1 cut(s)	13
Eco32I	GATATC	1 cut(s)	530
Eco47I	GGWCC	2 cut(s)	224, 496
Eco57I	CTGAAG	1 cut(s)	822
Eco81I	CCTNAGG	1 cut(s)	96
Eco88I	CYCGRG	1 cut(s)	339
Eco91I	GGTNACC	1 cut(s)	347
EcoO109I	RGGNCCY	1 cut(s)	224
EcoO65I	GGTNACC	1 cut(s)	347
EcoRI	GAATTC	1 cut(s)	1338
EcoRII	CCWGG	4 cut(s)	1363, 1399, 1468, 1519
EcoRV	GATATC	1 cut(s)	530
EcoT14I	CCWWGG	3 cut(s)	27, 402, 515
EcoT22I	ATGCAT	2 cut(s)	1015, 1549
EcoT38I	GRGCYC	1 cut(s)	13
ErhI	CCWWGG	3 cut(s)	27, 402, 515
Esp3I	CGTCTC	1 cut(s)	287
FaeI	CATG	8 cut(s)	332, 406, 519, 647, 661, 1163, 1175, 1453
FalI	AAGNNNNNCTT	2 cut(s)	249, 281
FatI	CATG	8 cut(s)	328, 402, 515, 643, 657, 1159, 1171, 1449
Fnu4HI	GCNGC	4 cut(s)	45, 81, 333, 556
FokI	GGATG	5 cut(s)	9, 358, 419, 476, 1316
FriOI	GRGCYC	1 cut(s)	13
Fsp4HI	GCNGC	4 cut(s)	45, 81, 333, 556
FspBI	CTAG	3 cut(s)	552, 650, 1230
FspI	TGCGCA	1 cut(s)	523
GlaI	GCGC	3 cut(s)	116, 523, 1356
GluI	GCNGC	4 cut(s)	45, 81, 333, 556
GsaI	CCCAGC	2 cut(s)	1026, 1040
GsuI	CTGGAG	2 cut(s)	105, 698
HaeIII	GGCC	6 cut(s)	62, 68, 808, 927, 934, 941
HapII	CCGG	1 cut(s)	928
HhaI	GCGC	3 cut(s)	117, 524, 1357
Hin1II	CATG	8 cut(s)	332, 406, 519, 647, 661, 1163, 1175, 1453
Hin6I	GCGC	3 cut(s)	115, 522, 1355
HinP1I	GCGC	3 cut(s)	115, 522, 1355
HincII	GTYRAC	1 cut(s)	655
HindII	GTYRAC	1 cut(s)	655
HindIII	AAGCTT	1 cut(s)	1345
HinfI	GANTC	2 cut(s)	232, 639
HpaII	CCGG	1 cut(s)	928
HphI	GGTGA	5 cut(s)	112, 341, 755, 1336, 1484
Hpy166II	GTNNAC	3 cut(s)	242, 655, 695
Hpy188I	TCNGA	4 cut(s)	252, 322, 1572, 1579
Hpy188III	TCNNGA	6 cut(s)	386, 461, 677, 1193, 1230, 1301
Hpy8I	GTNNAC	3 cut(s)	242, 655, 695
Hpy99I	CGWCG	1 cut(s)	1227
HpyAV	CCTTC	4 cut(s)	629, 797, 875, 1227
HpyCH4III	ACNGT	7 cut(s)	73, 536, 692, 917, 1227, 1243, 1261
HpyF10VI	GCNNNNNNNGC	7 cut(s)	86, 202, 262, 805, 1019, 1553, 1591
HpyF3I	CTNAG	6 cut(s)	96, 591, 1320, 1343, 1348, 1557
Hsp92II	CATG	8 cut(s)	332, 406, 519, 647, 661, 1163, 1175, 1453
HspAI	GCGC	3 cut(s)	115, 522, 1355
Kzo9I	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
LmnI	GCTCC	4 cut(s)	31, 86, 553, 1417
Lsp1109I	GCAGC	2 cut(s)	92, 319
LweI	GCATC	7 cut(s)	160, 397, 454, 535, 1009, 1090, 1198
MaeI	CTAG	3 cut(s)	552, 650, 1230
MaeIII	GTNAC	1 cut(s)	347
MalI	GATC	6 cut(s)	513, 720, 765, 984, 993, 1170
MboI	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
MboII	GAAGA	8 cut(s)	172, 484, 487, 500, 571, 698, 1040, 1526
MfeI	CAATTG	1 cut(s)	1137
MflI	RGATCY	2 cut(s)	511, 982
MhlI	GDGCHC	2 cut(s)	13, 831
MlsI	TGGCCA	1 cut(s)	68
MluCI	AATT	8 cut(s)	730, 853, 1114, 1137, 1144, 1311, 1338, 1580
MluNI	TGGCCA	1 cut(s)	68
Mox20I	TGGCCA	1 cut(s)	68
Mph1103I	ATGCAT	2 cut(s)	1015, 1549
MscI	TGGCCA	1 cut(s)	68
MseI	TTAA	5 cut(s)	822, 950, 1059, 1482, 1506
MslI	CAYNNNNRTG	1 cut(s)	1542
Msp20I	TGGCCA	1 cut(s)	68
MspA1I	CMGCKG	2 cut(s)	47, 83
MspI	CCGG	1 cut(s)	928
MspR9I	CCNGG	4 cut(s)	1365, 1401, 1470, 1521
MunI	CAATTG	1 cut(s)	1137
Mva1269I	GAATGC	2 cut(s)	1547, 1645
MvaI	CCWGG	4 cut(s)	1365, 1401, 1470, 1521
MwoI	GCNNNNNNNGC	7 cut(s)	86, 202, 262, 805, 1019, 1553, 1591
NcoI	CCATGG	2 cut(s)	402, 515
NdeII	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
NlaIII	CATG	8 cut(s)	332, 406, 519, 647, 661, 1163, 1175, 1453
NlaIV	GGNNCC	3 cut(s)	33, 513, 972
NmuCI	GTSAC	1 cut(s)	347
NsbI	TGCGCA	1 cut(s)	523
NsiI	ATGCAT	2 cut(s)	1015, 1549
NspI	RCATGY	1 cut(s)	661
PaeR7I	CTCGAG	1 cut(s)	339
PctI	GAATGC	2 cut(s)	1547, 1645
PfeI	GAWTC	2 cut(s)	232, 639
PflFI	GACNNNGTC	1 cut(s)	1243
PflMI	CCANNNNNTGG	1 cut(s)	28
PkrI	GCNGC	4 cut(s)	46, 82, 334, 557
PpuMI	RGGWCCY	1 cut(s)	224
PshAI	GACNNNNGTC	1 cut(s)	918
PsiI	TTATAA	1 cut(s)	276
Psp5II	RGGWCCY	1 cut(s)	224
Psp6I	CCWGG	4 cut(s)	1363, 1399, 1468, 1519
PspEI	GGTNACC	1 cut(s)	347
PspFI	CCCAGC	2 cut(s)	1022, 1036
PspGI	CCWGG	4 cut(s)	1363, 1399, 1468, 1519
PspN4I	GGNNCC	3 cut(s)	33, 513, 972
PspPI	GGNCC	5 cut(s)	224, 496, 806, 933, 940
PspPPI	RGGWCCY	1 cut(s)	224
PspXI	VCTCGAGB	1 cut(s)	339
PsuI	RGATCY	2 cut(s)	511, 982
PsyI	GACNNNGTC	1 cut(s)	1243
PvuII	CAGCTG	1 cut(s)	83
RsaI	GTAC	6 cut(s)	648, 1094, 1258, 1277, 1387, 1419
RsaNI	GTAC	6 cut(s)	647, 1093, 1257, 1276, 1386, 1418
RseI	CAYNNNNRTG	1 cut(s)	1542
SaqAI	TTAA	5 cut(s)	822, 950, 1059, 1482, 1506
SatI	GCNGC	4 cut(s)	45, 81, 333, 556
Sau3AI	GATC	6 cut(s)	511, 718, 763, 982, 991, 1168
Sau96I	GGNCC	5 cut(s)	224, 496, 806, 933, 940
ScaI	AGTACT	1 cut(s)	1094
ScrFI	CCNGG	4 cut(s)	1365, 1401, 1470, 1521
SduI	GDGCHC	2 cut(s)	13, 831
SfaNI	GCATC	7 cut(s)	160, 397, 454, 535, 1009, 1090, 1198
SfcI	CTRYAG	2 cut(s)	583, 1000
Sfr274I	CTCGAG	1 cut(s)	339
SinI	GGWCC	2 cut(s)	224, 496
SlaI	CTCGAG	1 cut(s)	339
SmiMI	CAYNNNNRTG	1 cut(s)	1542
SmlI	CTYRAG	1 cut(s)	339
SmoI	CTYRAG	1 cut(s)	339
SpeI	ACTAGT	1 cut(s)	649
Sse9I	AATT	8 cut(s)	730, 853, 1114, 1137, 1144, 1311, 1338, 1580
SsiI	CCGC	2 cut(s)	45, 556
SspI	AATATT	1 cut(s)	1179
SspMI	CTAG	3 cut(s)	552, 650, 1230
StyD4I	CCNGG	4 cut(s)	1363, 1399, 1468, 1519
StyI	CCWWGG	3 cut(s)	27, 402, 515
TaaI	ACNGT	7 cut(s)	73, 536, 692, 917, 1227, 1243, 1261
TaqI	TCGA	5 cut(s)	340, 766, 875, 922, 1222
TasI	AATT	8 cut(s)	730, 853, 1114, 1137, 1144, 1311, 1338, 1580
TatI	WGTACW	3 cut(s)	646, 1092, 1417
TauI	GCSGC	2 cut(s)	47, 558
TfiI	GAWTC	2 cut(s)	232, 639
Tru1I	TTAA	5 cut(s)	822, 950, 1059, 1482, 1506
Tru9I	TTAA	5 cut(s)	822, 950, 1059, 1482, 1506
TscAI	CASTG	5 cut(s)	76, 541, 636, 1126, 1248
TseFI	GTSAC	1 cut(s)	347
TseI	GCWGC	2 cut(s)	80, 332
Tsp45I	GTSAC	1 cut(s)	347
TspDTI	ATGAA	3 cut(s)	317, 485, 1526
TspGWI	ACGGA	2 cut(s)	848, 1293
TspRI	CASTG	5 cut(s)	76, 541, 636, 1126, 1248
Tth111I	GACNNNGTC	1 cut(s)	1243
Van91I	CCANNNNNTGG	1 cut(s)	28
VpaK11BI	GGWCC	2 cut(s)	224, 496
XapI	RAATTY	3 cut(s)	853, 1114, 1338
XbaI	TCTAGA	1 cut(s)	1229
XceI	RCATGY	1 cut(s)	661
XcmI	CCANNNNNNNNNTGG	2 cut(s)	25, 409
XhoI	CTCGAG	1 cut(s)	339
XspI	CTAG	3 cut(s)	552, 650, 1230
ZrmI	AGTACT	1 cut(s)	1094
Zsp2I	ATGCAT	2 cut(s)	1015, 1549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.