Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003041

Physical Location & Seq

Genomic Coordinates Reverse (-)

56867819 .. 56870506

Gene Structure 2688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40141

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGCCGCAACTCAGGAAAAAGCGACGCCTCCTTCTACACCTTTATCCTCCAAACCCATTCTCCAGCTTCGGACCGCTTCCTCCGCATCATCCGATCCGGCCCAGGATCCGATCTCAACCCGACCCTCCGTCCCGCCGCCCCTCATCCGACCCCTCGACTCCACCGCTGCCGCCAAAGGCCTCCCAGTCATGTTGAGGGCTCAATCCAGCCATCCCTTGGAGCCTTTATCTGCCGCTGAAATCTCGGTGGCCGTGGCCACTGTCAGGGCAGCTGGAGCAACCCCTGAGGTGAGGGATAGTATGCGCTTTGTTGAAGTAGCTTTGGTAGAACCAGATAAGCGTGTTGTTGCATTGGCAGATGCGTATTTCTTCCCTCCTTTCCAGCCATCATTGCTTCCCAGAACAAAAGGAGGACCTATGATTCCCAGTAAACTTCCTCCGAGGCAAGCGAGGCTTGTAGTTTATAACAAAAAGTCAAATGAGACGAGTGTTTGGGTTGTTGAGCTATCAGAAGTTCATGCTGCAACTCGAGGTGGTCACCATAGGGGTAAAGTCATCTCATCCAAAGTTGTTCCAGATGTTCAGCCTCCCATGGATGCTATGGAATATGCTGAATGTGAAGCTGTTGTAAAGGACTATCCTCCATTTCGGGATGCAATGAAGAAGAGGGGTATTGAAGATTTGGACCTCGTAATGGTGGATCCATGGTGCGCAGGATATCACAGTGAGGCTGATGCTCCTAGCCGCAGGCTTGCTAAACCACTTATCTTCTGTAGAACTGAGAGTGATTGCCCTATGGAAAATGGTTATGCTCGTCCAGTGGAAGGAATCCATGTACTAGTTGACATGCAAAATATGGTTGTTCTGGAGTTTGAAGACCGTAAACTTGTTCCCCTGCCTCCTGCTGATCCTTTGAGAAATTATACTTCTGGTGAAACACGAGGAGGTGTTGATCGAAGTGATGTGAAACCCCTAAAGATAGTTCAGCCTGAAGGGCCAAGTTTTCGTGTTAATGGGCACTTTGTTGAATGGCAGAAGTGGAATTTCCGTATTGGCTTTACTTCGAGGGAAGGTTTGGTTATCTACTCTGTTGCTTATATTGACGGTAGTCGAGGCCGGAGGCCCGTGGCCCACAGGTTAAGTTTTGTTGAGATGGTGGTTCCTTATGGAGATCCAAATGATCCCCACTACAGGAAAAATGCATTTGATGCTGGGGAAGATGGGCTGGGTAAAAATGCACATTCTCTTAAAAAGGGTTGTGATTGTTTAGGTTATATCAAGTACTTTGATGCACACTTTACAAATTTCACTGGGGGTGTTGAAACAATTGAGAATTGTGTTTGCTTGCATGAGGAGGATCATGGAATATTATGGAAGCATCAGGATTGGAGAACAGGTTTAGCAGAAGTTCGACGGTCTAGAAGGCTGACAGTGTCTTTTATCTGTACGGTAGCTAACTATGAGTACGGATTTTACTGGCATTTTTATCAGGCAAGCTGCTATCATCTGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

504

Amino Acids

56.16

Weight (kDa)

7.26

Isoelectric Point (pI)

45.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN3	PF02728	196 - 299	5.1e-28	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	325 - 499	1.4e-74	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42490
fragaria_vesca	FvH4_2g01360 FvH4_2g01360 FvH4_2g01360 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090
malus_domestica	MD06G1166900.v1.1 MD13G1102300.v1.1 MD14G1172500.v1.1
prunus_persica	Prupe.1G243500_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1
pyrus_communis	pycom13g08940 pycom14g14400
rosa_chinensis	RchiOBHm_Chr4g0432841 RchiOBHm_Chr7g0192721
rosa_laevigata	RLG00000004334 RLG00000006809
rosa_multiflora	Rmu_sc0002040.1_g000015 Rmu_sc0005234.1_g000004
rosa_roxburghii	Rroxscaffold_3G00262720 Rroxscaffold_5G00374260
rosa_rugosa	Rorug04G0263100 Rorug07G0004200
rosa_samantha	Rh4AG317300 Rh4BG325500 Rh4CG340400 Rh4DG320700 Rh7DG131400
rosa_wichuraiana	Rw4G027600 Rw7G011050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	465
Acc16I	TGCGCA	1 cut(s)	712
AccB7I	CCANNNNNTGG	1 cut(s)	217
AciI	CCGC	9 cut(s)	6, 75, 84, 134, 137, 165, 171, 234, 745
AclWI	GGATC	9 cut(s)	89, 101, 114, 695, 708, 902, 1166, 1175, 1365
AcoI	YGGCCR	3 cut(s)	3, 249, 255
AcsI	RAATTY	2 cut(s)	1042, 1303
AcuI	CTGAAG	1 cut(s)	1011
AcyI	GRCGYC	1 cut(s)	26
AfaI	GTAC	4 cut(s)	837, 1283, 1447, 1466
AfiI	CCNNNNNNNGG	5 cut(s)	217, 264, 694, 824, 1191
AgsI	TTSAA	5 cut(s)	314, 677, 875, 1028, 1322
AhdI	GACNNNNNGTC	1 cut(s)	128
AhlI	ACTAGT	1 cut(s)	838
AjnI	CCWGG	1 cut(s)	102
AluBI	AGCT	7 cut(s)	67, 272, 320, 505, 623, 1454, 1497
AluI	AGCT	7 cut(s)	67, 272, 320, 505, 623, 1454, 1497
Alw26I	GTCTC	1 cut(s)	476
AlwI	GGATC	9 cut(s)	89, 101, 114, 695, 708, 902, 1166, 1175, 1365
Ama87I	CYCGRG	1 cut(s)	528
AoxI	GGCC	9 cut(s)	3, 99, 178, 249, 255, 995, 1114, 1121, 1128
ApeKI	GCWGC	4 cut(s)	167, 269, 521, 1497
ApoI	RAATTY	2 cut(s)	1042, 1303
AspLEI	GCGC	2 cut(s)	306, 713
AspS9I	GGNCC	7 cut(s)	72, 100, 413, 685, 995, 1122, 1129
AsuHPI	GGTGA	3 cut(s)	301, 530, 944
AvaI	CYCGRG	1 cut(s)	528
AvaII	GGWCC	3 cut(s)	72, 413, 685
AxyI	CCTNAGG	1 cut(s)	285
BaeGI	GKGCMC	1 cut(s)	1020
BalI	TGGCCA	1 cut(s)	257
BamHI	GGATCC	2 cut(s)	106, 700
BanII	GRGCYC	1 cut(s)	202
BauI	CACGAG	1 cut(s)	939
BbsI	GAAGAC	1 cut(s)	882
BbvI	GCAGC	4 cut(s)	154, 281, 508, 1484
BccI	CCATC	4 cut(s)	219, 394, 1147, 1214
BceAI	ACGGC	1 cut(s)	236
BciT130I	CCWGG	1 cut(s)	104
BcoDI	GTCTC	1 cut(s)	476
BcuI	ACTAGT	1 cut(s)	838
BfaI	CTAG	3 cut(s)	741, 839, 1419
BfmI	CTRYAG	2 cut(s)	772, 1189
BglI	GCCNNNNNGGC	1 cut(s)	994
BisI	GCNGC	9 cut(s)	6, 137, 168, 171, 234, 270, 522, 745, 1498
BlsI	GCNGC	9 cut(s)	7, 138, 169, 172, 235, 271, 523, 746, 1499
BmcAI	AGTACT	1 cut(s)	1283
Bme1390I	CCNGG	1 cut(s)	104
Bme18I	GGWCC	3 cut(s)	72, 413, 685
BmeRI	GACNNNNNGTC	1 cut(s)	128
BmeT110I	CYCGRG	1 cut(s)	528
BmgT120I	GGNCC	7 cut(s)	72, 100, 413, 685, 995, 1122, 1129
BmiI	GGNNCC	4 cut(s)	108, 222, 702, 1161
BmrFI	CCNGG	1 cut(s)	104
BmrI	ACTGGG	3 cut(s)	179, 420, 1320
BmsI	GCATC	8 cut(s)	95, 349, 586, 643, 724, 1198, 1279, 1387
BmuI	ACTGGG	3 cut(s)	179, 420, 1320
BoxI	GACNNNNGTC	1 cut(s)	1107
BpiI	GAAGAC	1 cut(s)	882
BpmI	CTGGAG	3 cut(s)	47, 294, 887
BsaHI	GRCGYC	1 cut(s)	26
BsaJI	CCNNGG	7 cut(s)	102, 216, 252, 440, 591, 704, 1125
BsaXI	ACNNNNNCTCC	4 cut(s)	45, 75, 1381, 1411
Bsc4I	CCNNNNNNNGG	5 cut(s)	217, 264, 694, 824, 1191
Bse1I	ACTGG	5 cut(s)	185, 426, 818, 1315, 1481
Bse21I	CCTNAGG	1 cut(s)	285
Bse3DI	GCAATG	2 cut(s)	389, 663
BseBI	CCWGG	1 cut(s)	104
BseDI	CCNNGG	7 cut(s)	102, 216, 252, 440, 591, 704, 1125
BseGI	GGATG	6 cut(s)	89, 144, 211, 560, 601, 658
BseLI	CCNNNNNNNGG	5 cut(s)	217, 264, 694, 824, 1191
BseMI	GCAATG	2 cut(s)	389, 663
BseMII	CTCAG	3 cut(s)	26, 276, 771
BseNI	ACTGG	5 cut(s)	185, 426, 818, 1315, 1481
BseRI	GAGGAG	2 cut(s)	957, 1367
BseSI	GKGCMC	1 cut(s)	1020
BseXI	GCAGC	4 cut(s)	154, 281, 508, 1484
BseYI	CCCAGC	2 cut(s)	1211, 1225
BshFI	GGCC	9 cut(s)	5, 101, 180, 251, 257, 997, 1116, 1123, 1130
BsiHKCI	CYCGRG	1 cut(s)	528
BsiSI	CCGG	2 cut(s)	98, 1117
BslFI	GGGAC	1 cut(s)	116
BslI	CCNNNNNNNGG	5 cut(s)	217, 264, 694, 824, 1191
BsmAI	GTCTC	1 cut(s)	476
BsmBI	CGTCTC	1 cut(s)	476
BsmFI	GGGAC	1 cut(s)	116
BsnI	GGCC	9 cut(s)	5, 101, 180, 251, 257, 997, 1116, 1123, 1130
BsoBI	CYCGRG	1 cut(s)	528
Bsp1286I	GDGCHC	2 cut(s)	202, 1020
Bsp143I	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
Bsp19I	CCATGG	2 cut(s)	591, 704
BspACI	CCGC	9 cut(s)	6, 75, 84, 134, 137, 165, 171, 234, 745
BspANI	GGCC	9 cut(s)	5, 101, 180, 251, 257, 997, 1116, 1123, 1130
BspCNI	CTCAG	3 cut(s)	25, 277, 772
BspLI	GGNNCC	4 cut(s)	108, 222, 702, 1161
BspPI	GGATC	9 cut(s)	89, 101, 114, 695, 708, 902, 1166, 1175, 1365
BsrDI	GCAATG	2 cut(s)	389, 663
BsrI	ACTGG	5 cut(s)	185, 426, 818, 1315, 1481
BssECI	CCNNGG	7 cut(s)	102, 216, 252, 440, 591, 704, 1125
BssMI	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
BssNI	GRCGYC	1 cut(s)	26
BssSI	CACGAG	1 cut(s)	939
BssT1I	CCWWGG	3 cut(s)	216, 591, 704
Bst2BI	CACGAG	1 cut(s)	939
Bst2UI	CCWGG	1 cut(s)	104
Bst4CI	ACNGT	7 cut(s)	262, 725, 881, 1106, 1416, 1432, 1450
Bst6I	CTCTTC	1 cut(s)	659
BstACI	GRCGYC	1 cut(s)	26
BstAPI	GCANNNNNTGC	1 cut(s)	1208
BstC8I	GCNNGC	5 cut(s)	447, 749, 753, 1346, 1495
BstDEI	CTNAG	3 cut(s)	12, 285, 780
BstDSI	CCRYGG	4 cut(s)	252, 591, 704, 1125
BstEII	GGTNACC	1 cut(s)	536
BstF5I	GGATG	6 cut(s)	89, 144, 211, 560, 601, 658
BstHHI	GCGC	2 cut(s)	306, 713
BstKTI	GATC	9 cut(s)	97, 109, 114, 703, 910, 955, 1174, 1183, 1360
BstMAI	GTCTC	1 cut(s)	476
BstMBI	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 275, 391, 451, 994, 1208
BstNI	CCWGG	1 cut(s)	104
BstNSI	RCATGY	1 cut(s)	850
BstPAI	GACNNNNGTC	1 cut(s)	1107
BstPI	GGTNACC	1 cut(s)	536
BstSCI	CCNGG	1 cut(s)	102
BstSFI	CTRYAG	2 cut(s)	772, 1189
BstSLI	GKGCMC	1 cut(s)	1020
BstV1I	GCAGC	4 cut(s)	154, 281, 508, 1484
BstV2I	GAAGAC	1 cut(s)	882
BstX2I	RGATCY	3 cut(s)	106, 700, 1171
BstYI	RGATCY	3 cut(s)	106, 700, 1171
Bsu36I	CCTNAGG	1 cut(s)	285
BsuRI	GGCC	9 cut(s)	5, 101, 180, 251, 257, 997, 1116, 1123, 1130
BtgI	CCRYGG	4 cut(s)	252, 591, 704, 1125
BtsCI	GGATG	6 cut(s)	89, 144, 211, 560, 601, 658
BtsIMutI	CAGTG	5 cut(s)	258, 730, 825, 1308, 1437
Cac8I	GCNNGC	5 cut(s)	447, 749, 753, 1346, 1495
CfoI	GCGC	2 cut(s)	306, 713
Cfr13I	GGNCC	7 cut(s)	72, 100, 413, 685, 995, 1122, 1129
CpoI	CGGWCCG	1 cut(s)	72
CseI	GACGC	1 cut(s)	34
Csp6I	GTAC	4 cut(s)	836, 1282, 1446, 1465
CspI	CGGWCCG	1 cut(s)	72
CviAII	CATG	8 cut(s)	190, 518, 592, 705, 833, 847, 1349, 1361
CviQI	GTAC	4 cut(s)	836, 1282, 1446, 1465
DdeI	CTNAG	3 cut(s)	12, 285, 780
DpnI	GATC	9 cut(s)	96, 108, 113, 702, 909, 954, 1173, 1182, 1359
DpnII	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
DriI	GACNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	3 cut(s)	3, 249, 255
Eam1104I	CTCTTC	1 cut(s)	659
Eam1105I	GACNNNNNGTC	1 cut(s)	128
EarI	CTCTTC	1 cut(s)	659
Eco130I	CCWWGG	3 cut(s)	216, 591, 704
Eco147I	AGGCCT	1 cut(s)	180
Eco24I	GRGCYC	1 cut(s)	202
Eco32I	GATATC	1 cut(s)	719
Eco47I	GGWCC	3 cut(s)	72, 413, 685
Eco57I	CTGAAG	1 cut(s)	1011
Eco81I	CCTNAGG	1 cut(s)	285
Eco88I	CYCGRG	1 cut(s)	528
Eco91I	GGTNACC	1 cut(s)	536
EcoO109I	RGGNCCY	1 cut(s)	413
EcoO65I	GGTNACC	1 cut(s)	536
EcoRII	CCWGG	1 cut(s)	102
EcoRV	GATATC	1 cut(s)	719
EcoT14I	CCWWGG	3 cut(s)	216, 591, 704
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	1 cut(s)	202
ErhI	CCWWGG	3 cut(s)	216, 591, 704
Esp3I	CGTCTC	1 cut(s)	476
FaeI	CATG	8 cut(s)	193, 521, 595, 708, 836, 850, 1352, 1364
FalI	AAGNNNNNCTT	2 cut(s)	438, 470
FaqI	GGGAC	1 cut(s)	116
FatI	CATG	8 cut(s)	189, 517, 591, 704, 832, 846, 1348, 1360
FauI	CCCGC	1 cut(s)	141
Fnu4HI	GCNGC	9 cut(s)	6, 137, 168, 171, 234, 270, 522, 745, 1498
FokI	GGATG	6 cut(s)	76, 131, 198, 547, 608, 665
FriOI	GRGCYC	1 cut(s)	202
Fsp4HI	GCNGC	9 cut(s)	6, 137, 168, 171, 234, 270, 522, 745, 1498
FspBI	CTAG	3 cut(s)	741, 839, 1419
FspI	TGCGCA	1 cut(s)	712
GlaI	GCGC	2 cut(s)	305, 712
GluI	GCNGC	9 cut(s)	6, 137, 168, 171, 234, 270, 522, 745, 1498
GsaI	CCCAGC	2 cut(s)	1215, 1229
GsuI	CTGGAG	3 cut(s)	47, 294, 887
HaeIII	GGCC	9 cut(s)	5, 101, 180, 251, 257, 997, 1116, 1123, 1130
HapII	CCGG	2 cut(s)	98, 1117
HgaI	GACGC	1 cut(s)	34
HhaI	GCGC	2 cut(s)	306, 713
Hin1I	GRCGYC	1 cut(s)	26
Hin1II	CATG	8 cut(s)	193, 521, 595, 708, 836, 850, 1352, 1364
Hin6I	GCGC	2 cut(s)	304, 711
HinP1I	GCGC	2 cut(s)	304, 711
HincII	GTYRAC	1 cut(s)	844
HindII	GTYRAC	1 cut(s)	844
HinfI	GANTC	3 cut(s)	158, 421, 828
HpaII	CCGG	2 cut(s)	98, 1117
HphI	GGTGA	3 cut(s)	301, 530, 944
Hpy166II	GTNNAC	3 cut(s)	431, 844, 884
Hpy188I	TCNGA	6 cut(s)	72, 94, 111, 149, 441, 511
Hpy188III	TCNNGA	6 cut(s)	14, 575, 650, 866, 1382, 1419
Hpy8I	GTNNAC	3 cut(s)	431, 844, 884
Hpy99I	CGWCG	2 cut(s)	28, 1416
HpyAV	CCTTC	5 cut(s)	42, 818, 986, 1064, 1416
HpyCH4III	ACNGT	7 cut(s)	262, 725, 881, 1106, 1416, 1432, 1450
HpyCH4V	TGCA	9 cut(s)	350, 524, 656, 850, 1202, 1238, 1292, 1348, 1510
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 275, 391, 451, 994, 1208
HpyF3I	CTNAG	3 cut(s)	12, 285, 780
Hsp92I	GRCGYC	1 cut(s)	26
Hsp92II	CATG	8 cut(s)	193, 521, 595, 708, 836, 850, 1352, 1364
HspAI	GCGC	2 cut(s)	304, 711
Kzo9I	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
LmnI	GCTCC	3 cut(s)	220, 275, 742
Lsp1109I	GCAGC	4 cut(s)	154, 281, 508, 1484
LweI	GCATC	8 cut(s)	95, 349, 586, 643, 724, 1198, 1279, 1387
MaeI	CTAG	3 cut(s)	741, 839, 1419
MaeIII	GTNAC	1 cut(s)	536
MalI	GATC	9 cut(s)	96, 108, 113, 702, 909, 954, 1173, 1182, 1359
MboI	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
MboII	GAAGA	7 cut(s)	361, 673, 676, 689, 760, 887, 1229
MfeI	CAATTG	1 cut(s)	1326
MflI	RGATCY	3 cut(s)	106, 700, 1171
MhlI	GDGCHC	2 cut(s)	202, 1020
MlsI	TGGCCA	1 cut(s)	257
MluCI	AATT	5 cut(s)	919, 1042, 1303, 1326, 1333
MluNI	TGGCCA	1 cut(s)	257
MlyI	GAGTC	1 cut(s)	152
MmeI	TCCRAC	1 cut(s)	172
Mox20I	TGGCCA	1 cut(s)	257
Mph1103I	ATGCAT	1 cut(s)	1204
MscI	TGGCCA	1 cut(s)	257
MseI	TTAA	3 cut(s)	1011, 1139, 1248
Msp20I	TGGCCA	1 cut(s)	257
MspA1I	CMGCKG	3 cut(s)	167, 236, 272
MspI	CCGG	2 cut(s)	98, 1117
MspR9I	CCNGG	1 cut(s)	104
MunI	CAATTG	1 cut(s)	1326
MvaI	CCWGG	1 cut(s)	104
MwoI	GCNNNNNNNGC	6 cut(s)	83, 275, 391, 451, 994, 1208
NcoI	CCATGG	2 cut(s)	591, 704
NdeII	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
NlaIII	CATG	8 cut(s)	193, 521, 595, 708, 836, 850, 1352, 1364
NlaIV	GGNNCC	4 cut(s)	108, 222, 702, 1161
NmuCI	GTSAC	1 cut(s)	536
NsbI	TGCGCA	1 cut(s)	712
NsiI	ATGCAT	1 cut(s)	1204
NspI	RCATGY	1 cut(s)	850
PaeR7I	CTCGAG	1 cut(s)	528
PceI	AGGCCT	1 cut(s)	180
PfeI	GAWTC	2 cut(s)	421, 828
PflFI	GACNNNGTC	1 cut(s)	1432
PflMI	CCANNNNNTGG	1 cut(s)	217
PkrI	GCNGC	9 cut(s)	7, 138, 169, 172, 235, 271, 523, 746, 1499
PleI	GAGTC	1 cut(s)	152
PpsI	GAGTC	1 cut(s)	152
PpuMI	RGGWCCY	1 cut(s)	413
PshAI	GACNNNNGTC	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	465
Psp5II	RGGWCCY	1 cut(s)	413
Psp6I	CCWGG	1 cut(s)	102
PspEI	GGTNACC	1 cut(s)	536
PspFI	CCCAGC	2 cut(s)	1211, 1225
PspGI	CCWGG	1 cut(s)	102
PspN4I	GGNNCC	4 cut(s)	108, 222, 702, 1161
PspPI	GGNCC	7 cut(s)	72, 100, 413, 685, 995, 1122, 1129
PspPPI	RGGWCCY	1 cut(s)	413
PspXI	VCTCGAGB	1 cut(s)	528
PsuI	RGATCY	3 cut(s)	106, 700, 1171
PsyI	GACNNNGTC	1 cut(s)	1432
PvuII	CAGCTG	1 cut(s)	272
RsaI	GTAC	4 cut(s)	837, 1283, 1447, 1466
RsaNI	GTAC	4 cut(s)	836, 1282, 1446, 1465
Rsr2I	CGGWCCG	1 cut(s)	72
RsrII	CGGWCCG	1 cut(s)	72
SaqAI	TTAA	3 cut(s)	1011, 1139, 1248
SatI	GCNGC	9 cut(s)	6, 137, 168, 171, 234, 270, 522, 745, 1498
Sau3AI	GATC	9 cut(s)	94, 106, 111, 700, 907, 952, 1171, 1180, 1357
Sau96I	GGNCC	7 cut(s)	72, 100, 413, 685, 995, 1122, 1129
ScaI	AGTACT	1 cut(s)	1283
SchI	GAGTC	1 cut(s)	152
ScrFI	CCNGG	1 cut(s)	104
SduI	GDGCHC	2 cut(s)	202, 1020
SfaNI	GCATC	8 cut(s)	95, 349, 586, 643, 724, 1198, 1279, 1387
SfcI	CTRYAG	2 cut(s)	772, 1189
Sfr274I	CTCGAG	1 cut(s)	528
SinI	GGWCC	3 cut(s)	72, 413, 685
SlaI	CTCGAG	1 cut(s)	528
SmlI	CTYRAG	1 cut(s)	528
SmoI	CTYRAG	1 cut(s)	528
SpeI	ACTAGT	1 cut(s)	838
Sse9I	AATT	5 cut(s)	919, 1042, 1303, 1326, 1333
SseBI	AGGCCT	1 cut(s)	180
SsiI	CCGC	9 cut(s)	6, 75, 84, 134, 137, 165, 171, 234, 745
SspI	AATATT	1 cut(s)	1368
SspMI	CTAG	3 cut(s)	741, 839, 1419
StuI	AGGCCT	1 cut(s)	180
StyD4I	CCNGG	1 cut(s)	102
StyI	CCWWGG	3 cut(s)	216, 591, 704
TaaI	ACNGT	7 cut(s)	262, 725, 881, 1106, 1416, 1432, 1450
TaqI	TCGA	6 cut(s)	156, 529, 955, 1064, 1111, 1411
TasI	AATT	5 cut(s)	919, 1042, 1303, 1326, 1333
TatI	WGTACW	2 cut(s)	835, 1281
TauI	GCSGC	5 cut(s)	8, 139, 173, 236, 747
TfiI	GAWTC	2 cut(s)	421, 828
Tru1I	TTAA	3 cut(s)	1011, 1139, 1248
Tru9I	TTAA	3 cut(s)	1011, 1139, 1248
TscAI	CASTG	5 cut(s)	265, 730, 825, 1315, 1437
TseFI	GTSAC	1 cut(s)	536
TseI	GCWGC	4 cut(s)	167, 269, 521, 1497
Tsp45I	GTSAC	1 cut(s)	536
TspDTI	ATGAA	2 cut(s)	506, 674
TspGWI	ACGGA	3 cut(s)	118, 1037, 1482
TspRI	CASTG	5 cut(s)	265, 730, 825, 1315, 1437
Tth111I	GACNNNGTC	1 cut(s)	1432
Van91I	CCANNNNNTGG	1 cut(s)	217
VpaK11BI	GGWCC	3 cut(s)	72, 413, 685
XapI	RAATTY	2 cut(s)	1042, 1303
XbaI	TCTAGA	1 cut(s)	1418
XceI	RCATGY	1 cut(s)	850
XcmI	CCANNNNNNNNNTGG	2 cut(s)	214, 598
XhoI	CTCGAG	1 cut(s)	528
XspI	CTAG	3 cut(s)	741, 839, 1419
ZrmI	AGTACT	1 cut(s)	1283
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.