Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003041

Physical Location & Seq

Genomic Coordinates Forward (+)

14424691 .. 14430408

Gene Structure 5718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G166700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGCCTCAGCTTCGAAAAAAACGTCGTCTTCTTGTTGCTTCCGCTCCGATTCGGCTCCCATTCCACGCGAGGCTGCGCCGGCTCCGAACGCCGTCGTTTCGGCCTCCGTGGTTCAAGATTGGACCGCCATCGCGGGTTCCGAGGATCGGCGCGATGATCAGCGACCCAAAAAGATAGCGATGGCGTCCTTGATTACCGAACCGTCCGCCAATGCATCCACCACTGGCATCCCGATCATGCTTAGGCCTCAAACAAGGCATCCACTGGACCCTTTATCTGCTGCCGAAATCTCTGTGGCAGTGGCAACCGTCAGGGCTGCTGGAGCCACACCTGAGGTTAGAGATAGTATGCGTTTTGTTGAAGTTGTTCTACTGGAACCAGATAAACACGTTGTAGGTTTAGCGGATGCGTACTTCTTCCCCCCTTTCCAACCATCATTGCTTCCCAGAACCAAAGGTGGACCTATAATCCCGACTAAGCTTCCCCCAAGGCGAGCTAGGCTTGTTGTGTACAACAAAAAGTCTAATGAGACAAGCACATGGGTTGTTGAGCTGTCAGAAGTGCATGCAGCCACTCGAGGTGGACATCACAGAGGAAAAGTAATATCCTCACAAGTTGTTCCAGATGTTCAGCCTCCCATGGATGCTGTGGAGTATGCTGAATGTGAAGCTGTTGTGAAAGACTTTCCTCCATTTAGAGAGGCTATGAAGAAGAGGGGTATTGAAGATATGGACCTTGTGATGGTTGATGCCTGGTGCGTTGGTTACCATAGTGATGCTGATGCTCCCAGTCAAAGGCTTGCTAAACCACTTATATTCTGTAGAACTGAGAGTGACTGCCCAATGGAAAATGGTTATGCACGCCCAGTTGAGGGCATCTATGTACTTGTTGATATGCAAAACATGGTGGTGGTAGAGTTTGAAGACCGTAAGCTTGTTCCTCTACCTCCAGCTGATCCATTGAGGAACTATACTCCTGGTGAAACAAGAGGTGGTGTTGATAGAAGTGATGTGAAACCTTTACAAATTCTTCAGCCTGAAGGTCCAAGCTTTCGTGTTAATGGGTACTTTGTGGAGTGGCAGAAGTGGAATTTTCGTATCGGATTCACTCCTAGGGAGGGACTGGTTATATATTCAGTGGCATATGTTGATGGCAGTAGAGGACGAAGGCCTGTAGCCCATAGGTTGAGTTTTGTGGAAATGGTGGTGCCATATGGCGATCCAAATGACCCGCATTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCCTGGGTAAAAACGCACATTCTCTCAAGAAGGGGTGCGATTGTTTGGGGTATATCAAATACTTTGATGCACATTTTACAAATTTCACCGGAGGTATTGAAACTATTGAAAATTGTGTATGCTTGCACGAAGAAGATCATGGAATTCTGTGGAAGCATCAGGACTGGAGAACAGGCTTAGCAGAAGTGCGCAGGTCAAGGCGACTAACAGTGTCATTTATATGTACTGTGGCTAATTATGAGTATGGATTCTTCTGGCACTTTTATCAGGATGGGAAGATTGAAGCTGAAGTTAAACTTACAGGAATACTCAGTTTAGGAGCACTGCAACCTGGAGAAGTTCGAAAATATGGTACTGTTATTGCACCAGGGTTATATGCACCAGTTCATCAACATTTTTTTGTTGCTCGTATGGATATGGCTGTTGATTGCAAACCTGGGGAAACTTACAATCAGGTTGTGGAGCTGGACGTAAAGGTTGAGAAACCTGGGGATAATAATGTCCACAGCAATGCATTTTATGCTGAAGAGACACTTCTCAGGACTGAATTGCAAGCAATGCGTGACTGTAATCCTTTGACTGCTCGCCATTGGATTGTAAGGAACACGCGAACTGTTAACAGGACTGGACAGTTAACAGGCTACAAGCTCGTACCTGGTTCAAACTGTTTGCCATTAGCCGGTTCTGAGGCCAAGTTTTTGCGAAGAGCAGCATTCTTGAAACATAACCTTTGGGTTACACCATATGCCCAAGATGAGATGTTTCCTGGAGGAGAGTTTCCAAACCAAAATCCACGTGTCGGTGAAGGATTGGCCACATGGGTTAAGAAGAACCGATCTCTGGAAGAAACTGATATTGTTCTTTGGTATGTTTTTGGAATAACACACGTGCCACGATTGGAAGACTGGCCTGTCATGCCGGTGGAGCGAATTGGGTTTATGCTCATGCCTCATGGATTCTTCAACTGCTCTCCAGCGGTGGATGTTCCACCTAGTGCATGTGAATTGGAGGCCAAAGACAATGATGTAAAAGACAATGGGGTAGCCAAGCCAATTCCGAATGGCTTGCTAGCAGCAAAGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

785

Amino Acids

87.36

Weight (kDa)

6.43

Isoelectric Point (pI)

40.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42490
fragaria_vesca	FvH4_2g01360 FvH4_2g01360 FvH4_2g01360 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_4g25490 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090 FvH4_5g06090
malus_domestica	MD06G1166900.v1.1 MD13G1102300.v1.1 MD14G1172500.v1.1
prunus_persica	Prupe.1G243500_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1 Prupe.5G166700_v2.0.a1
pyrus_communis	pycom13g08940 pycom14g14400
rosa_chinensis	RchiOBHm_Chr4g0432841 RchiOBHm_Chr7g0192721
rosa_laevigata	RLG00000004334 RLG00000006809
rosa_multiflora	Rmu_sc0002040.1_g000015 Rmu_sc0005234.1_g000004
rosa_roxburghii	Rroxscaffold_3G00262720 Rroxscaffold_5G00374260
rosa_rugosa	Rorug04G0263100 Rorug07G0004200
rosa_samantha	Rh4AG317300 Rh4BG325500 Rh4CG340400 Rh4DG320700 Rh7DG131400
rosa_wichuraiana	Rw4G027600 Rw7G011050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2180
Acc16I	TGCGCA	1 cut(s)	1460
Acc36I	ACCTGC	1 cut(s)	1452
AccB1I	GGYRCC	1 cut(s)	1207
AccBSI	CCGCTC	1 cut(s)	45
AccII	CGCG	4 cut(s)	69, 134, 153, 1879
AciI	CCGC	7 cut(s)	43, 126, 134, 207, 404, 1232, 2246
AclWI	GGATC	3 cut(s)	153, 950, 1214
AcoI	YGGCCR	1 cut(s)	2082
AcsI	RAATTY	4 cut(s)	1026, 1090, 1351, 1413
AcuI	CTGAAG	4 cut(s)	1016, 1059, 1578, 1815
AcvI	CACGTG	2 cut(s)	2066, 2158
AcyI	GRCGYC	1 cut(s)	185
AdeI	CACNNNGTG	1 cut(s)	2264
AfaI	GTAC	7 cut(s)	413, 512, 885, 1067, 1495, 1624, 1923
AfiI	CCNNNNNNNGG	9 cut(s)	147, 742, 795, 871, 872, 1118, 1949, 2069, 2110
AflIII	ACRYGT	3 cut(s)	388, 2065, 2155
AjnI	CCWGG	9 cut(s)	752, 976, 1272, 1600, 1636, 1705, 1756, 1924, 2035
Alw21I	GWGCWC	1 cut(s)	1594
Alw26I	GTCTC	2 cut(s)	524, 1793
AlwI	GGATC	3 cut(s)	153, 950, 1214
Ama87I	CYCGRG	1 cut(s)	576
AoxI	GGCC	9 cut(s)	3, 102, 245, 1169, 1270, 1959, 2082, 2177, 2280
ApeKI	GCWGC	6 cut(s)	74, 281, 317, 569, 1979, 2342
ApoI	RAATTY	4 cut(s)	1026, 1090, 1351, 1413
ArsI	GACNNNNNNTTYG	2 cut(s)	8, 40
Asp700I	GAANNNNTTC	1 cut(s)	366
AspA2I	CCTAGG	1 cut(s)	1112
AspLEI	GCGC	3 cut(s)	79, 153, 1461
AspS9I	GGNCC	5 cut(s)	123, 268, 461, 733, 1043
AsuHPI	GGTGA	3 cut(s)	992, 1348, 2084
AsuII	TTCGAA	2 cut(s)	14, 1612
AsuNHI	GCTAGC	1 cut(s)	2338
AvaI	CYCGRG	1 cut(s)	576
AvaII	GGWCC	5 cut(s)	123, 268, 461, 733, 1043
AvrII	CCTAGG	1 cut(s)	1112
AxyI	CCTNAGG	1 cut(s)	333
BalI	TGGCCA	1 cut(s)	2084
BanI	GGYRCC	1 cut(s)	1207
BarI	GAAGNNNNNNTAC	4 cut(s)	354, 386, 1505, 1537
BbrPI	CACGTG	2 cut(s)	2066, 2158
BbsI	GAAGAC	3 cut(s)	21, 930, 2178
Bbv12I	GWGCWC	1 cut(s)	1594
BbvCI	CCTCAGC	1 cut(s)	7
BbvI	GCAGC	5 cut(s)	61, 268, 304, 581, 1991
BccI	CCATC	7 cut(s)	137, 175, 442, 736, 1145, 1262, 1535
BceAI	ACGGC	1 cut(s)	77
BcgI	CGANNNNNNTGC	2 cut(s)	2317, 2351
BciT130I	CCWGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
BclI	TGATCA	1 cut(s)	157
BcoDI	GTCTC	2 cut(s)	524, 1793
BfaI	CTAG	4 cut(s)	498, 1113, 2262, 2339
BfmI	CTRYAG	2 cut(s)	820, 1173
BfuAI	ACCTGC	1 cut(s)	1452
BisI	GCNGC	6 cut(s)	75, 282, 318, 570, 1980, 2343
BlnI	CCTAGG	1 cut(s)	1112
BlpI	GCTNAGC	1 cut(s)	1447
BlsI	GCNGC	6 cut(s)	76, 283, 319, 571, 1981, 2344
Bme1390I	CCNGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
Bme18I	GGWCC	5 cut(s)	123, 268, 461, 733, 1043
BmeT110I	CYCGRG	1 cut(s)	576
BmgT120I	GGNCC	5 cut(s)	123, 268, 461, 733, 1043
BmiI	GGNNCC	7 cut(s)	57, 84, 139, 270, 325, 378, 1209
BmrFI	CCNGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
BmrI	ACTGGG	2 cut(s)	783, 860
BmtI	GCTAGC	1 cut(s)	2342
BmuI	ACTGGG	2 cut(s)	783, 860
BpiI	GAAGAC	3 cut(s)	21, 930, 2178
BpmI	CTGGAG	6 cut(s)	342, 933, 1456, 1623, 2058, 2226
Bpu10I	CCTNAGC	2 cut(s)	7, 242
Bpu1102I	GCTNAGC	1 cut(s)	1447
Bpu14I	TTCGAA	2 cut(s)	14, 1612
BpuEI	CTTGAG	1 cut(s)	1280
BsaAI	YACGTR	2 cut(s)	2066, 2158
BsaHI	GRCGYC	1 cut(s)	185
BsaJI	CCNNGG	9 cut(s)	108, 141, 488, 639, 1112, 1273, 1637, 1706, 1757
BsaWI	WCCGGW	1 cut(s)	1358
Bsc4I	CCNNNNNNNGG	9 cut(s)	147, 742, 795, 871, 872, 1118, 1949, 2069, 2110
Bse118I	RCCGGY	3 cut(s)	79, 1949, 2188
Bse21I	CCTNAGG	1 cut(s)	333
Bse3DI	GCAATG	3 cut(s)	437, 1786, 1833
BseBI	CCWGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
BseDI	CCNNGG	9 cut(s)	108, 141, 488, 639, 1112, 1273, 1637, 1706, 1757
BseGI	GGATG	7 cut(s)	215, 228, 259, 412, 649, 1546, 2257
BseLI	CCNNNNNNNGG	9 cut(s)	147, 742, 795, 871, 872, 1118, 1949, 2069, 2110
BseMI	GCAATG	3 cut(s)	437, 1786, 1833
BseMII	CTCAG	6 cut(s)	21, 324, 819, 1594, 1822, 1947
BseRI	GAGGAG	1 cut(s)	2055
BseXI	GCAGC	5 cut(s)	61, 268, 304, 581, 1991
BseYI	CCCAGC	1 cut(s)	1259
Bsh1236I	CGCG	4 cut(s)	69, 134, 153, 1879
BshFI	GGCC	9 cut(s)	5, 104, 247, 1171, 1272, 1961, 2084, 2179, 2282
BshNI	GGYRCC	1 cut(s)	1207
BsiHKAI	GWGCWC	1 cut(s)	1594
BsiHKCI	CYCGRG	1 cut(s)	576
BsiSI	CCGG	4 cut(s)	80, 1359, 1950, 2189
BslFI	GGGAC	1 cut(s)	1134
BslI	CCNNNNNNNGG	9 cut(s)	147, 742, 795, 871, 872, 1118, 1949, 2069, 2110
BsmAI	GTCTC	2 cut(s)	524, 1793
BsmFI	GGGAC	1 cut(s)	1134
BsmI	GAATGC	1 cut(s)	1982
BsnI	GGCC	9 cut(s)	5, 104, 247, 1171, 1272, 1961, 2084, 2179, 2282
BsoBI	CYCGRG	1 cut(s)	576
Bsp119I	TTCGAA	2 cut(s)	14, 1612
Bsp1286I	GDGCHC	1 cut(s)	1594
Bsp1407I	TGTACA	1 cut(s)	510
Bsp143I	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
Bsp1720I	GCTNAGC	1 cut(s)	1447
Bsp19I	CCATGG	1 cut(s)	639
BspACI	CCGC	7 cut(s)	43, 126, 134, 207, 404, 1232, 2246
BspANI	GGCC	9 cut(s)	5, 104, 247, 1171, 1272, 1961, 2084, 2179, 2282
BspCNI	CTCAG	6 cut(s)	20, 325, 820, 1593, 1821, 1948
BspFNI	CGCG	4 cut(s)	69, 134, 153, 1879
BspLI	GGNNCC	7 cut(s)	57, 84, 139, 270, 325, 378, 1209
BspMI	ACCTGC	1 cut(s)	1452
BspOI	GCTAGC	1 cut(s)	2342
BspPI	GGATC	3 cut(s)	153, 950, 1214
BspQI	GCTCTTC	1 cut(s)	1969
BspT104I	TTCGAA	2 cut(s)	14, 1612
BspT107I	GGYRCC	1 cut(s)	1207
BsrBI	CCGCTC	1 cut(s)	45
BsrDI	GCAATG	3 cut(s)	437, 1786, 1833
BsrFI	RCCGGY	3 cut(s)	79, 1949, 2188
BsrGI	TGTACA	1 cut(s)	510
BssAI	RCCGGY	3 cut(s)	79, 1949, 2188
BssECI	CCNNGG	9 cut(s)	108, 141, 488, 639, 1112, 1273, 1637, 1706, 1757
BssMI	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
BssNI	GRCGYC	1 cut(s)	185
BssT1I	CCWWGG	3 cut(s)	488, 639, 1112
Bst2UI	CCWGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
Bst6I	CTCTTC	3 cut(s)	707, 1791, 1969
BstACI	GRCGYC	1 cut(s)	185
BstAPI	GCANNNNNTGC	2 cut(s)	1790, 1828
BstAUI	TGTACA	1 cut(s)	510
BstBAI	YACGTR	2 cut(s)	2066, 2158
BstBI	TTCGAA	2 cut(s)	14, 1612
BstDEI	CTNAG	9 cut(s)	7, 242, 333, 477, 828, 1447, 1580, 1808, 1956
BstDSI	CCRYGG	2 cut(s)	108, 639
BstEII	GGTNACC	1 cut(s)	764
BstF5I	GGATG	7 cut(s)	215, 228, 259, 412, 649, 1546, 2257
BstFNI	CGCG	4 cut(s)	69, 134, 153, 1879
BstHHI	GCGC	3 cut(s)	79, 153, 1461
BstKTI	GATC	7 cut(s)	148, 160, 237, 958, 1222, 1408, 2108
BstMAI	GTCTC	2 cut(s)	524, 1793
BstMBI	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
BstMWI	GCNNNNNNNGC	9 cut(s)	80, 89, 323, 499, 1256, 1790, 1828, 2185, 2194
BstNI	CCWGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
BstNSI	RCATGY	2 cut(s)	569, 2271
BstPI	GGTNACC	1 cut(s)	764
BstSCI	CCNGG	9 cut(s)	752, 976, 1272, 1600, 1636, 1705, 1756, 1924, 2035
BstSFI	CTRYAG	2 cut(s)	820, 1173
BstUI	CGCG	4 cut(s)	69, 134, 153, 1879
BstV1I	GCAGC	5 cut(s)	61, 268, 304, 581, 1991
BstV2I	GAAGAC	3 cut(s)	21, 930, 2178
Bsu36I	CCTNAGG	1 cut(s)	333
BsuRI	GGCC	9 cut(s)	5, 104, 247, 1171, 1272, 1961, 2084, 2179, 2282
BtgI	CCRYGG	2 cut(s)	108, 639
BtgZI	GCGATG	3 cut(s)	115, 168, 194
BtsCI	GGATG	7 cut(s)	215, 228, 259, 412, 649, 1546, 2257
BtsI	GCAGTG	2 cut(s)	306, 1592
BtsIMutI	CAGTG	6 cut(s)	222, 263, 306, 1143, 1485, 1592
BveI	ACCTGC	1 cut(s)	1452
CfoI	GCGC	3 cut(s)	79, 153, 1461
Cfr10I	RCCGGY	3 cut(s)	79, 1949, 2188
Cfr13I	GGNCC	5 cut(s)	123, 268, 461, 733, 1043
CseI	GACGC	1 cut(s)	174
CsiI	ACCWGGT	1 cut(s)	1924
Csp6I	GTAC	7 cut(s)	412, 511, 884, 1066, 1494, 1623, 1922
CviQI	GTAC	7 cut(s)	412, 511, 884, 1066, 1494, 1623, 1922
DdeI	CTNAG	9 cut(s)	7, 242, 333, 477, 828, 1447, 1580, 1808, 1956
DpnI	GATC	7 cut(s)	147, 159, 236, 957, 1221, 1407, 2107
DpnII	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
DraIII	CACNNNGTG	1 cut(s)	2264
DrdI	GACNNNNNNGTC	1 cut(s)	2180
DseDI	GACNNNNNNGTC	1 cut(s)	2180
EaeI	YGGCCR	1 cut(s)	2082
Eam1104I	CTCTTC	3 cut(s)	707, 1791, 1969
EarI	CTCTTC	3 cut(s)	707, 1791, 1969
EciI	GGCGGA	1 cut(s)	196
Eco130I	CCWWGG	3 cut(s)	488, 639, 1112
Eco147I	AGGCCT	2 cut(s)	247, 1171
Eco47I	GGWCC	5 cut(s)	123, 268, 461, 733, 1043
Eco57I	CTGAAG	4 cut(s)	1016, 1059, 1578, 1815
Eco72I	CACGTG	2 cut(s)	2066, 2158
Eco81I	CCTNAGG	1 cut(s)	333
Eco88I	CYCGRG	1 cut(s)	576
Eco91I	GGTNACC	1 cut(s)	764
EcoO65I	GGTNACC	1 cut(s)	764
EcoRI	GAATTC	1 cut(s)	1413
EcoRII	CCWGG	9 cut(s)	752, 976, 1272, 1600, 1636, 1705, 1756, 1924, 2035
EcoT14I	CCWWGG	3 cut(s)	488, 639, 1112
EcoT22I	ATGCAT	2 cut(s)	217, 1786
ErhI	CCWWGG	3 cut(s)	488, 639, 1112
FalI	AAGNNNNNCTT	4 cut(s)	1551, 1583, 1788, 1820
FaqI	GGGAC	1 cut(s)	1134
FauI	CCCGC	2 cut(s)	127, 1239
FauNDI	CATATG	3 cut(s)	1144, 1213, 2014
FbaI	TGATCA	1 cut(s)	157
Fnu4HI	GCNGC	6 cut(s)	75, 282, 318, 570, 1980, 2343
FokI	GGATG	7 cut(s)	202, 215, 246, 419, 656, 1553, 2264
Fsp4HI	GCNGC	6 cut(s)	75, 282, 318, 570, 1980, 2343
FspBI	CTAG	4 cut(s)	498, 1113, 2262, 2339
FspI	TGCGCA	1 cut(s)	1460
GlaI	GCGC	3 cut(s)	78, 152, 1460
GluI	GCNGC	6 cut(s)	75, 282, 318, 570, 1980, 2343
GsaI	CCCAGC	1 cut(s)	1263
GsuI	CTGGAG	6 cut(s)	342, 933, 1456, 1623, 2058, 2226
HaeIII	GGCC	9 cut(s)	5, 104, 247, 1171, 1272, 1961, 2084, 2179, 2282
HapII	CCGG	4 cut(s)	80, 1359, 1950, 2189
HgaI	GACGC	1 cut(s)	174
HhaI	GCGC	3 cut(s)	79, 153, 1461
Hin1I	GRCGYC	1 cut(s)	185
Hin6I	GCGC	3 cut(s)	77, 151, 1459
HinP1I	GCGC	3 cut(s)	77, 151, 1459
HincII	GTYRAC	2 cut(s)	1888, 1905
HindII	GTYRAC	2 cut(s)	1888, 1905
HindIII	AAGCTT	4 cut(s)	479, 932, 1048, 2348
HinfI	GANTC	4 cut(s)	50, 1104, 1518, 2226
HpaI	GTTAAC	2 cut(s)	1888, 1905
HpaII	CCGG	4 cut(s)	80, 1359, 1950, 2189
HphI	GGTGA	3 cut(s)	992, 1348, 2084
Hpy166II	GTNNAC	6 cut(s)	461, 511, 584, 1774, 1888, 1905
Hpy188I	TCNGA	7 cut(s)	49, 87, 142, 559, 1103, 1957, 2328
Hpy8I	GTNNAC	6 cut(s)	461, 511, 584, 1774, 1888, 1905
Hpy99I	CGWCG	2 cut(s)	28, 98
HpyAV	CCTTC	4 cut(s)	1034, 1161, 1294, 2069
HpyCH4IV	ACGT	5 cut(s)	23, 390, 1740, 2065, 2157
HpyF10VI	GCNNNNNNNGC	9 cut(s)	80, 89, 323, 499, 1256, 1790, 1828, 2185, 2194
HpyF3I	CTNAG	9 cut(s)	7, 242, 333, 477, 828, 1447, 1580, 1808, 1956
HpySE526I	ACGT	5 cut(s)	23, 390, 1740, 2065, 2157
Hsp92I	GRCGYC	1 cut(s)	185
HspAI	GCGC	3 cut(s)	77, 151, 1459
KroI	GCCGGC	1 cut(s)	79
KroNI	GCCGGC	1 cut(s)	81
Ksp22I	TGATCA	1 cut(s)	157
KspAI	GTTAAC	2 cut(s)	1888, 1905
Kzo9I	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
LguI	GCTCTTC	1 cut(s)	1969
LmnI	GCTCC	8 cut(s)	50, 61, 88, 323, 790, 1589, 1732, 2194
Lsp1109I	GCAGC	5 cut(s)	61, 268, 304, 581, 1991
MabI	ACCWGGT	1 cut(s)	1924
MaeI	CTAG	4 cut(s)	498, 1113, 2262, 2339
MaeII	ACGT	5 cut(s)	23, 390, 1740, 2065, 2157
MaeIII	GTNAC	4 cut(s)	764, 833, 1832, 2005
MalI	GATC	7 cut(s)	147, 159, 236, 957, 1221, 1407, 2107
MbiI	CCGCTC	1 cut(s)	45
MboI	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
MhlI	GDGCHC	1 cut(s)	1594
MlsI	TGGCCA	1 cut(s)	2084
MluNI	TGGCCA	1 cut(s)	2084
MmeI	TCCRAC	1 cut(s)	454
Mox20I	TGGCCA	1 cut(s)	2084
Mph1103I	ATGCAT	2 cut(s)	217, 1786
MroNI	GCCGGC	1 cut(s)	79
MroXI	GAANNNNTTC	1 cut(s)	366
MscI	TGGCCA	1 cut(s)	2084
MseI	TTAA	5 cut(s)	1059, 1563, 1887, 1904, 2094
MslI	CAYNNNNRTG	5 cut(s)	774, 908, 1489, 1779, 2189
Msp20I	TGGCCA	1 cut(s)	2084
MspA1I	CMGCKG	2 cut(s)	953, 2246
MspI	CCGG	4 cut(s)	80, 1359, 1950, 2189
MspR9I	CCNGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
Mva1269I	GAATGC	1 cut(s)	1982
MvaI	CCWGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
MvnI	CGCG	4 cut(s)	69, 134, 153, 1879
MwoI	GCNNNNNNNGC	9 cut(s)	80, 89, 323, 499, 1256, 1790, 1828, 2185, 2194
NaeI	GCCGGC	1 cut(s)	81
NcoI	CCATGG	1 cut(s)	639
NdeI	CATATG	3 cut(s)	1144, 1213, 2014
NdeII	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
NgoMIV	GCCGGC	1 cut(s)	79
NheI	GCTAGC	1 cut(s)	2338
NlaIV	GGNNCC	7 cut(s)	57, 84, 139, 270, 325, 378, 1209
NmuCI	GTSAC	2 cut(s)	833, 1832
NsbI	TGCGCA	1 cut(s)	1460
NsiI	ATGCAT	2 cut(s)	217, 1786
NspI	RCATGY	2 cut(s)	569, 2271
NspV	TTCGAA	2 cut(s)	14, 1612
PaeI	GCATGC	1 cut(s)	569
PaeR7I	CTCGAG	1 cut(s)	576
PceI	AGGCCT	2 cut(s)	247, 1171
PciSI	GCTCTTC	1 cut(s)	1969
PcsI	WCGNNNNNNNCGW	2 cut(s)	20, 138
PctI	GAATGC	1 cut(s)	1982
PdiI	GCCGGC	1 cut(s)	81
PdmI	GAANNNNTTC	1 cut(s)	366
PfeI	GAWTC	4 cut(s)	50, 1104, 1518, 2226
PfoI	TCCNGGA	1 cut(s)	2035
PkrI	GCNGC	6 cut(s)	76, 283, 319, 571, 1981, 2344
PmaCI	CACGTG	2 cut(s)	2066, 2158
PmlI	CACGTG	2 cut(s)	2066, 2158
Ppu21I	YACGTR	2 cut(s)	2066, 2158
Psp6I	CCWGG	9 cut(s)	752, 976, 1272, 1600, 1636, 1705, 1756, 1924, 2035
PspCI	CACGTG	2 cut(s)	2066, 2158
PspEI	GGTNACC	1 cut(s)	764
PspFI	CCCAGC	1 cut(s)	1259
PspGI	CCWGG	9 cut(s)	752, 976, 1272, 1600, 1636, 1705, 1756, 1924, 2035
PspN4I	GGNNCC	7 cut(s)	57, 84, 139, 270, 325, 378, 1209
PspPI	GGNCC	5 cut(s)	123, 268, 461, 733, 1043
PspXI	VCTCGAGB	1 cut(s)	576
PvuII	CAGCTG	1 cut(s)	953
RsaI	GTAC	7 cut(s)	413, 512, 885, 1067, 1495, 1624, 1923
RsaNI	GTAC	7 cut(s)	412, 511, 884, 1066, 1494, 1623, 1922
RseI	CAYNNNNRTG	5 cut(s)	774, 908, 1489, 1779, 2189
SapI	GCTCTTC	1 cut(s)	1969
SaqAI	TTAA	5 cut(s)	1059, 1563, 1887, 1904, 2094
SatI	GCNGC	6 cut(s)	75, 282, 318, 570, 1980, 2343
Sau3AI	GATC	7 cut(s)	145, 157, 234, 955, 1219, 1405, 2105
Sau96I	GGNCC	5 cut(s)	123, 268, 461, 733, 1043
ScrFI	CCNGG	9 cut(s)	754, 978, 1274, 1602, 1638, 1707, 1758, 1926, 2037
SduI	GDGCHC	1 cut(s)	1594
SexAI	ACCWGGT	1 cut(s)	1924
SfcI	CTRYAG	2 cut(s)	820, 1173
Sfr274I	CTCGAG	1 cut(s)	576
SfuI	TTCGAA	2 cut(s)	14, 1612
SinI	GGWCC	5 cut(s)	123, 268, 461, 733, 1043
SlaI	CTCGAG	1 cut(s)	576
SmiMI	CAYNNNNRTG	5 cut(s)	774, 908, 1489, 1779, 2189
SmlI	CTYRAG	2 cut(s)	576, 1295
SmoI	CTYRAG	2 cut(s)	576, 1295
SphI	GCATGC	1 cut(s)	569
SseBI	AGGCCT	2 cut(s)	247, 1171
SsiI	CCGC	7 cut(s)	43, 126, 134, 207, 404, 1232, 2246
SspMI	CTAG	4 cut(s)	498, 1113, 2262, 2339
StuI	AGGCCT	2 cut(s)	247, 1171
StyD4I	CCNGG	9 cut(s)	752, 976, 1272, 1600, 1636, 1705, 1756, 1924, 2035
StyI	CCWWGG	3 cut(s)	488, 639, 1112
TaiI	ACGT	5 cut(s)	26, 393, 1743, 2068, 2160
TaqI	TCGA	3 cut(s)	14, 577, 1612
TatI	WGTACW	3 cut(s)	510, 883, 1493
TfiI	GAWTC	4 cut(s)	50, 1104, 1518, 2226
Tru1I	TTAA	5 cut(s)	1059, 1563, 1887, 1904, 2094
Tru9I	TTAA	5 cut(s)	1059, 1563, 1887, 1904, 2094
TscAI	CASTG	6 cut(s)	229, 270, 306, 1143, 1485, 1599
TseFI	GTSAC	2 cut(s)	833, 1832
TseI	GCWGC	6 cut(s)	74, 281, 317, 569, 1979, 2342
Tsp45I	GTSAC	2 cut(s)	833, 1832
TspDTI	ATGAA	2 cut(s)	722, 1646
TspGWI	ACGGA	1 cut(s)	97
TspRI	CASTG	6 cut(s)	229, 270, 306, 1143, 1485, 1599
VpaK11BI	GGWCC	5 cut(s)	123, 268, 461, 733, 1043
XapI	RAATTY	4 cut(s)	1026, 1090, 1351, 1413
XceI	RCATGY	2 cut(s)	569, 2271
XcmI	CCANNNNNNNNNTGG	1 cut(s)	646
XhoI	CTCGAG	1 cut(s)	576
XmaJI	CCTAGG	1 cut(s)	1112
XmnI	GAANNNNTTC	1 cut(s)	366
XspI	CTAG	4 cut(s)	498, 1113, 2262, 2339
Zsp2I	ATGCAT	2 cut(s)	217, 1786

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.