Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003522

Physical Location & Seq

Genomic Coordinates Forward (+)

51229409 .. 51235888

Gene Structure 6480 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1412700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGAACCCACCAGCGATGACGTCCTCCGCCTCTGTTTCCGTTTGGCTGATTCTGTTGTTTGGCTTCTTTCACCTCCATAAGCTCGCTGCCAACGTCGAAGGTGACGCATTGAACGCGTTGAAGACCAATCTAGCTGATCCAAACAATGTTCTGCAGAGTTGGGATCCGACTCTCGTCAATCCCTGCACCTGGTTTCATGTCACTTGTAATAGCGAAAACAGCGTTACTCGAGTTGATCTTGGCAATGCCAATCTCTCTGGTCAATTGGTTGCACAGCTTGGTGTGCTTTCCAAGTTGCAGTACTTGGAACTTTACAGTAATAACATAACTGGAACCATTCCCGAAGAGCTTGGGGGTTTGGCAGACTTGGTCAGTTTGGATCTTTACTTGAACAAGTTACATGGTACCATTCCAGCGGCACTTGGCAACCTTGCAAAACTACGTTTCCTGCGTCTCAACAACAACACCTTGTCAGAGACTATTCCCTTGACTTTGACTAACATCCAATCATTGCAAGTCCTGGATCTTTCAAATAACAATCTGACAGGGGATATTCCAGTCAATGGATCTTTTTCACTTTTTACTCCCATCAGTTTTGCCAATAATCCTCTGAAACCACTTCCACCCTCTCCACCTCCTCCTGTTTCTCCGAACCCACCAAGTTCTCCAGGTACCACTGCTACTGGGGCTATTGCTGGAGGGGTTGCTGCTGGTGCTGCTTTGCTATTTGCTGCACCTGCAATTGCACTTGCTTATTGGCGACGAAGAAAACCACAGGATCATTTCTTTGATGTACCTGCTGAGGAGGATCCAGAAGTTCATTTAGGACAGCTCAAAAGGTTTTCTTTGCGTGAACTACAAGTTGCAACGGATACCTTTAGTAACAAAAATATTCTTGGTAGAGGTGGATTTGGTAAGGTTTATAAAGGACGCTTAGCTGATGGAACTCTGGTTGCTGTAAAAAGACTTAAAGAGGAGAGAACCCAAGGTGGGGAGCTACAGTTTCAAACAGAGGTTGAAATGATTAGCATGGCTGTCCACCGCAATCTGCTTCGTCTGCGTGGTTTTTGCATGACACCAACAGAAAGGCTGCTTGTATATCCTTTTATGTTTAATGGAAGTGTGGCATCATGTTTAAGAGATCGTCCAGAAGGACAAGCTGCACTTGATTGGCCAATAAGACAACGCATTGCGTTGGGATCTGCAAGAGGCCTTGCTTATTTACATGATCACTGTGATCCAAAAATTATTCACCGTGATGTGAAAGCAGCAAACATATTGTTGGATGAGGAATTCGAAGCAGTTGTTGGAGACTTTGGGTTGGCTAAACTCATGGACTACAAGGATACACATGTTACCACAGCAGTACGTGGCACAATTGGTCATATAGCACCAGAGTACCTTTCAACTGGAAAATCTTCCGAGAAAACTGATGTTTTTGGATACGGCGTCATGCTTCTTGAACTCATCACTGGGCAGAGGGCTTTTGATCTTGCTCGGCTTGCGAATGATGATGATGTCATGTTACTTGATTGGGTCAAAGGACTACTGAAAGATCGGAGGTTGGAAACTCTTGTTGATGCTGATCTGAATGGAAATTATGTTGACGATCAAGTGGAGCAGCTCATCCAAGTAGCTCTACTGTGCACACAAGGCACCCCAGGGGAACGACCCAAGATGTCAGAGGTTGTCCGGATGCTGGAAGGCGATGGTTTGGCTGAAAGATGGGAGGAGTGGCAAAAAGAGGAGGTGTTCCGCCAAGATTTCAACCCTATTCATCATCCAAGTACCAATTGGATCATAGACTCAACTTCTCATATTCCTCCGGATGAGTTGTCCGGTCCCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0008219 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010008 GO:0010033 GO:0010200 GO:0010243 GO:0010941 GO:0012505 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031090 GO:0031410 GO:0031982 GO:0032870 GO:0033612 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048545 GO:0048580 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051716 GO:0060089 GO:0060548 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0097708 GO:0098588 GO:0098805 GO:0140096 GO:1900140 GO:1901564 GO:1901698 GO:1901700 GO:1901701 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04626 map04016 map04075 map04626

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

617

Amino Acids

67.73

Weight (kDa)

5.45

Isoelectric Point (pI)

38.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 70	3.5e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	79 - 178	1.8e-10	Leucine-rich repeat region
LRR_8	PF13855	98 - 157	4.5e-07	Leucine rich repeat
Pkinase	PF00069	294 - 564	1.2e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	296 - 567	4.4e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13790 AT2G13800 AT2G13800 AT2G13800 AT2G13800 AT4G33430 AT4G33430
fragaria_vesca	FvH4_5g30840 FvH4_5g30840
malus_domestica	MD08G1221700.v1.1 MD15G1412700.v1.1 MD15G1413000.v1.1 MD15G1413200.v1.1 MD15G1413300.v1.1 MD15G1414000.v1.1
prunus_persica	Prupe.1G558800_v2.0.a1 Prupe.1G558900_v2.0.a1 Prupe.1G558900_v2.0.a1 Prupe.1G558900_v2.0.a1
pyrus_communis	pycom08g19230 pycom15g36730 pycom15g36740 pycom15g36780 pycom15g36820
rosa_chinensis	RchiOBHm_Chr7g0225981
rosa_laevigata	RLG00000001775
rosa_multiflora	Rmu_sc0002092.1_g000002 Rmu_sc0014767.1_g000001
rosa_roxburghii	Rroxscaffold_3G00233340
rosa_rugosa	Rorug07G0233900
rosa_samantha	Rh7AG369400 Rh7BG367900 Rh7CG387800 Rh7DG378900
rosa_wichuraiana	Rw0G020960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	924
AarI	CACCTGC	1 cut(s)	745
AatII	GACGTC	1 cut(s)	23
Acc36I	ACCTGC	2 cut(s)	745, 805
Acc65I	GGTACC	2 cut(s)	404, 671
AccB1I	GGYRCC	3 cut(s)	404, 671, 1655
AccB7I	CCANNNNNTGG	1 cut(s)	563
AccII	CGCG	1 cut(s)	116
AccIII	TCCGGA	2 cut(s)	1692, 1825
AciI	CCGC	4 cut(s)	27, 416, 1042, 1756
AcoI	YGGCCR	1 cut(s)	1172
AcsI	RAATTY	1 cut(s)	1292
AcyI	GRCGYC	2 cut(s)	20, 1449
AfaI	GTAC	7 cut(s)	302, 406, 673, 795, 1368, 1400, 1789
AfiI	CCNNNNNNNGG	5 cut(s)	189, 563, 990, 991, 1699
AflIII	ACRYGT	2 cut(s)	114, 1351
AgsI	TTSAA	9 cut(s)	112, 121, 391, 531, 1007, 1019, 1407, 1463, 1768
AjnI	CCWGG	4 cut(s)	188, 519, 667, 1660
AjuI	GAANNNNNNNTTGG	2 cut(s)	1290, 1322
Alw21I	GWGCWC	1 cut(s)	1649
Alw26I	GTCTC	3 cut(s)	458, 470, 1305
Alw44I	GTGCAC	1 cut(s)	1645
Ama87I	CYCGRG	1 cut(s)	228
Aor13HI	TCCGGA	2 cut(s)	1692, 1825
AoxI	GGCC	2 cut(s)	1172, 1210
ApaLI	GTGCAC	1 cut(s)	1645
ApeKI	GCWGC	8 cut(s)	86, 707, 716, 731, 1090, 1160, 1268, 1621
ApoI	RAATTY	1 cut(s)	1292
Asp700I	GAANNNNTTC	1 cut(s)	1417
Asp718I	GGTACC	2 cut(s)	404, 671
AspS9I	GGNCC	1 cut(s)	1841
AsuHPI	GGTGA	3 cut(s)	62, 113, 1244
AsuII	TTCGAA	1 cut(s)	1296
AvaI	CYCGRG	1 cut(s)	228
AvaII	GGWCC	1 cut(s)	1841
BaeGI	GKGCMC	1 cut(s)	1649
BaeI	ACNNNNGTAYC	4 cut(s)	1338, 1371, 1382, 1415
BalI	TGGCCA	1 cut(s)	1174
BamHI	GGATCC	2 cut(s)	163, 808
BanI	GGYRCC	3 cut(s)	404, 671, 1655
BbsI	GAAGAC	1 cut(s)	128
Bbv12I	GWGCWC	1 cut(s)	1649
BbvCI	CCTCAGC	1 cut(s)	801
BbvI	GCAGC	8 cut(s)	73, 694, 703, 718, 1077, 1147, 1280, 1633
BccI	CCATC	4 cut(s)	596, 935, 1703, 1719
BceAI	ACGGC	1 cut(s)	1462
BciT130I	CCWGG	4 cut(s)	190, 521, 669, 1662
BciVI	GTATCC	3 cut(s)	865, 1339, 1436
BclI	TGATCA	1 cut(s)	1228
BcoDI	GTCTC	3 cut(s)	458, 470, 1305
BfaI	CTAG	1 cut(s)	131
BfmI	CTRYAG	2 cut(s)	152, 998
BfuAI	ACCTGC	2 cut(s)	745, 805
BfuI	GTATCC	3 cut(s)	865, 1339, 1436
BisI	GCNGC	9 cut(s)	87, 417, 708, 717, 732, 1091, 1161, 1269, 1622
BlpI	GCTNAGC	1 cut(s)	934
BlsI	GCNGC	9 cut(s)	88, 418, 709, 718, 733, 1092, 1162, 1270, 1623
BmcAI	AGTACT	1 cut(s)	302
Bme1390I	CCNGG	4 cut(s)	190, 521, 669, 1662
Bme18I	GGWCC	1 cut(s)	1841
BmeT110I	CYCGRG	1 cut(s)	228
BmgT120I	GGNCC	1 cut(s)	1841
BmiI	GGNNCC	7 cut(s)	165, 334, 406, 673, 810, 1657, 1843
BmrFI	CCNGG	4 cut(s)	190, 521, 669, 1662
BmrI	ACTGGG	2 cut(s)	693, 1482
BmsI	GCATC	3 cut(s)	1136, 1570, 1686
BmuI	ACTGGG	2 cut(s)	693, 1482
BoxI	GACNNNNGTC	1 cut(s)	173
BpiI	GAAGAC	1 cut(s)	128
BpmI	CTGGAG	2 cut(s)	651, 717
Bpu10I	CCTNAGC	1 cut(s)	801
Bpu1102I	GCTNAGC	1 cut(s)	934
Bpu14I	TTCGAA	1 cut(s)	1296
BsaAI	YACGTR	1 cut(s)	1370
BsaBI	GATNNNNATC	1 cut(s)	1584
BsaHI	GRCGYC	2 cut(s)	20, 1449
BsaJI	CCNNGG	3 cut(s)	985, 1660, 1661
BsaWI	WCCGGW	3 cut(s)	1692, 1825, 1838
BsaXI	ACNNNNNCTCC	2 cut(s)	986, 1016
Bsc4I	CCNNNNNNNGG	5 cut(s)	189, 563, 990, 991, 1699
Bse1I	ACTGG	5 cut(s)	334, 557, 688, 1414, 1477
Bse3DI	GCAATG	3 cut(s)	250, 509, 1188
Bse8I	GATNNNNATC	1 cut(s)	1584
BseAI	TCCGGA	2 cut(s)	1692, 1825
BseBI	CCWGG	4 cut(s)	190, 521, 669, 1662
BseDI	CCNNGG	3 cut(s)	985, 1660, 1661
BseGI	GGATG	6 cut(s)	501, 1291, 1626, 1701, 1780, 1834
BseJI	GATNNNNATC	1 cut(s)	1584
BseLI	CCNNNNNNNGG	5 cut(s)	189, 563, 990, 991, 1699
BseMI	GCAATG	3 cut(s)	250, 509, 1188
BseMII	CTCAG	1 cut(s)	792
BseNI	ACTGG	5 cut(s)	334, 557, 688, 1414, 1477
BseRI	GAGGAG	5 cut(s)	627, 818, 989, 1745, 1760
BseSI	GKGCMC	1 cut(s)	1649
BseXI	GCAGC	8 cut(s)	73, 694, 703, 718, 1077, 1147, 1280, 1633
BsgI	GTGCAG	3 cut(s)	169, 717, 1146
Bsh1236I	CGCG	1 cut(s)	116
BshFI	GGCC	2 cut(s)	1174, 1212
BshNI	GGYRCC	3 cut(s)	404, 671, 1655
BsiHKAI	GWGCWC	1 cut(s)	1649
BsiHKCI	CYCGRG	1 cut(s)	228
BsiSI	CCGG	3 cut(s)	1693, 1826, 1839
BslFI	GGGAC	1 cut(s)	1827
BslI	CCNNNNNNNGG	5 cut(s)	189, 563, 990, 991, 1699
BsmAI	GTCTC	3 cut(s)	458, 470, 1305
BsmBI	CGTCTC	1 cut(s)	458
BsmFI	GGGAC	1 cut(s)	1827
BsnI	GGCC	2 cut(s)	1174, 1212
BsoBI	CYCGRG	1 cut(s)	228
Bsp119I	TTCGAA	1 cut(s)	1296
Bsp1286I	GDGCHC	1 cut(s)	1649
Bsp13I	TCCGGA	2 cut(s)	1692, 1825
Bsp1720I	GCTNAGC	1 cut(s)	934
BspACI	CCGC	4 cut(s)	27, 416, 1042, 1756
BspANI	GGCC	2 cut(s)	1174, 1212
BspCNI	CTCAG	1 cut(s)	793
BspEI	TCCGGA	2 cut(s)	1692, 1825
BspFNI	CGCG	1 cut(s)	116
BspLI	GGNNCC	7 cut(s)	165, 334, 406, 673, 810, 1657, 1843
BspMAI	CTGCAG	1 cut(s)	156
BspMI	ACCTGC	2 cut(s)	745, 805
BspQI	GCTCTTC	1 cut(s)	339
BspT104I	TTCGAA	1 cut(s)	1296
BspT107I	GGYRCC	3 cut(s)	404, 671, 1655
BsrDI	GCAATG	3 cut(s)	250, 509, 1188
BsrI	ACTGG	5 cut(s)	334, 557, 688, 1414, 1477
BssECI	CCNNGG	3 cut(s)	985, 1660, 1661
BssNI	GRCGYC	2 cut(s)	20, 1449
BssT1I	CCWWGG	1 cut(s)	985
Bst2UI	CCWGG	4 cut(s)	190, 521, 669, 1662
Bst4CI	ACNGT	5 cut(s)	317, 1002, 1235, 1256, 1644
Bst6I	CTCTTC	1 cut(s)	339
BstACI	GRCGYC	2 cut(s)	20, 1449
BstBAI	YACGTR	1 cut(s)	1370
BstBI	TTCGAA	1 cut(s)	1296
BstC8I	GCNNGC	2 cut(s)	84, 1503
BstDEI	CTNAG	2 cut(s)	801, 934
BstF5I	GGATG	6 cut(s)	501, 1291, 1626, 1701, 1780, 1834
BstFNI	CGCG	1 cut(s)	116
BstMAI	GTCTC	3 cut(s)	458, 470, 1305
BstNI	CCWGG	4 cut(s)	190, 521, 669, 1662
BstNSI	RCATGY	1 cut(s)	1355
BstPAI	GACNNNNGTC	1 cut(s)	173
BstSCI	CCNGG	4 cut(s)	188, 519, 667, 1660
BstSFI	CTRYAG	2 cut(s)	152, 998
BstSLI	GKGCMC	1 cut(s)	1649
BstUI	CGCG	1 cut(s)	116
BstV1I	GCAGC	8 cut(s)	73, 694, 703, 718, 1077, 1147, 1280, 1633
BstV2I	GAAGAC	1 cut(s)	128
BstX2I	RGATCY	6 cut(s)	163, 379, 523, 566, 808, 1199
BstYI	RGATCY	6 cut(s)	163, 379, 523, 566, 808, 1199
BsuI	GTATCC	3 cut(s)	865, 1339, 1436
BsuRI	GGCC	2 cut(s)	1174, 1212
BtgZI	GCGATG	2 cut(s)	29, 1722
BtsCI	GGATG	6 cut(s)	501, 1291, 1626, 1701, 1780, 1834
BtsI	GCAGTG	1 cut(s)	675
BtsIMutI	CAGTG	3 cut(s)	675, 1231, 1470
BveI	ACCTGC	2 cut(s)	745, 805
Cac8I	GCNNGC	2 cut(s)	84, 1503
Cfr13I	GGNCC	1 cut(s)	1841
CseI	GACGC	4 cut(s)	113, 440, 939, 1438
CsiI	ACCWGGT	1 cut(s)	188
Csp6I	GTAC	7 cut(s)	301, 405, 672, 794, 1367, 1399, 1788
CviQI	GTAC	7 cut(s)	301, 405, 672, 794, 1367, 1399, 1788
DdeI	CTNAG	2 cut(s)	801, 934
EaeI	YGGCCR	1 cut(s)	1172
Eam1104I	CTCTTC	1 cut(s)	339
EarI	CTCTTC	1 cut(s)	339
EciI	GGCGGA	2 cut(s)	16, 1745
Eco130I	CCWWGG	1 cut(s)	985
Eco147I	AGGCCT	1 cut(s)	1212
Eco47I	GGWCC	1 cut(s)	1841
Eco88I	CYCGRG	1 cut(s)	228
EcoRI	GAATTC	1 cut(s)	1292
EcoRII	CCWGG	4 cut(s)	188, 519, 667, 1660
EcoT14I	CCWWGG	1 cut(s)	985
ErhI	CCWWGG	1 cut(s)	985
Esp3I	CGTCTC	1 cut(s)	458
FalI	AAGNNNNNCTT	4 cut(s)	829, 861, 1149, 1181
FaqI	GGGAC	1 cut(s)	1827
FbaI	TGATCA	1 cut(s)	1228
Fnu4HI	GCNGC	9 cut(s)	87, 417, 708, 717, 732, 1091, 1161, 1269, 1622
FokI	GGATG	6 cut(s)	488, 1298, 1613, 1708, 1767, 1841
Fsp4HI	GCNGC	9 cut(s)	87, 417, 708, 717, 732, 1091, 1161, 1269, 1622
FspBI	CTAG	1 cut(s)	131
GluI	GCNGC	9 cut(s)	87, 417, 708, 717, 732, 1091, 1161, 1269, 1622
GsuI	CTGGAG	2 cut(s)	651, 717
HaeIII	GGCC	2 cut(s)	1174, 1212
HapII	CCGG	3 cut(s)	1693, 1826, 1839
HgaI	GACGC	4 cut(s)	113, 440, 939, 1438
Hin1I	GRCGYC	2 cut(s)	20, 1449
HincII	GTYRAC	1 cut(s)	1606
HindII	GTYRAC	1 cut(s)	1606
HinfI	GANTC	3 cut(s)	49, 169, 1805
HpaII	CCGG	3 cut(s)	1693, 1826, 1839
HphI	GGTGA	3 cut(s)	62, 113, 1244
Hpy166II	GTNNAC	4 cut(s)	854, 1039, 1606, 1647
Hpy188I	TCNGA	9 cut(s)	168, 475, 543, 612, 651, 1423, 1560, 1590, 1684
Hpy188III	TCNNGA	6 cut(s)	341, 812, 1148, 1460, 1693, 1826
Hpy8I	GTNNAC	4 cut(s)	854, 1039, 1606, 1647
Hpy99I	CGWCG	2 cut(s)	98, 765
HpyAV	CCTTC	3 cut(s)	92, 1145, 1697
HpyCH4III	ACNGT	5 cut(s)	317, 1002, 1235, 1256, 1644
HpyCH4IV	ACGT	4 cut(s)	20, 93, 442, 1369
HpyF3I	CTNAG	2 cut(s)	801, 934
HpySE526I	ACGT	4 cut(s)	20, 93, 442, 1369
Hsp92I	GRCGYC	2 cut(s)	20, 1449
Kpn2I	TCCGGA	2 cut(s)	1692, 1825
KpnI	GGTACC	2 cut(s)	408, 675
Ksp22I	TGATCA	1 cut(s)	1228
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	2 cut(s)	994, 1618
Lsp1109I	GCAGC	8 cut(s)	73, 694, 703, 718, 1077, 1147, 1280, 1633
LweI	GCATC	3 cut(s)	1136, 1570, 1686
MabI	ACCWGGT	1 cut(s)	188
MaeI	CTAG	1 cut(s)	131
MaeII	ACGT	4 cut(s)	20, 93, 442, 1369
MaeIII	GTNAC	7 cut(s)	101, 199, 223, 396, 881, 1354, 1524
MboII	GAAGA	4 cut(s)	133, 356, 777, 1410
MfeI	CAATTG	4 cut(s)	263, 741, 1377, 1792
MflI	RGATCY	6 cut(s)	163, 379, 523, 566, 808, 1199
MhlI	GDGCHC	1 cut(s)	1649
MlsI	TGGCCA	1 cut(s)	1174
MluCI	AATT	7 cut(s)	263, 741, 1245, 1292, 1377, 1597, 1792
MluI	ACGCGT	1 cut(s)	114
MluNI	TGGCCA	1 cut(s)	1174
MlyI	GAGTC	2 cut(s)	163, 1799
MmeI	TCCRAC	4 cut(s)	191, 1263, 1288, 1545
Mox20I	TGGCCA	1 cut(s)	1174
MroI	TCCGGA	2 cut(s)	1692, 1825
MroXI	GAANNNNTTC	1 cut(s)	1417
MscI	TGGCCA	1 cut(s)	1174
MseI	TTAA	3 cut(s)	969, 1113, 1136
MslI	CAYNNNNRTG	1 cut(s)	1257
Msp20I	TGGCCA	1 cut(s)	1174
MspA1I	CMGCKG	1 cut(s)	416
MspI	CCGG	3 cut(s)	1693, 1826, 1839
MspR9I	CCNGG	4 cut(s)	190, 521, 669, 1662
MunI	CAATTG	4 cut(s)	263, 741, 1377, 1792
MvaI	CCWGG	4 cut(s)	190, 521, 669, 1662
MvnI	CGCG	1 cut(s)	116
NlaIV	GGNNCC	7 cut(s)	165, 334, 406, 673, 810, 1657, 1843
NmeAIII	GCCGAG	1 cut(s)	1477
NmuCI	GTSAC	2 cut(s)	101, 199
NspI	RCATGY	1 cut(s)	1355
NspV	TTCGAA	1 cut(s)	1296
PaeR7I	CTCGAG	1 cut(s)	228
PaqCI	CACCTGC	1 cut(s)	745
PasI	CCCWGGG	1 cut(s)	1661
PceI	AGGCCT	1 cut(s)	1212
PciI	ACATGT	1 cut(s)	1351
PciSI	GCTCTTC	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 448
PdmI	GAANNNNTTC	1 cut(s)	1417
PfeI	GAWTC	1 cut(s)	49
PflFI	GACNNNGTC	1 cut(s)	368
PflMI	CCANNNNNTGG	1 cut(s)	563
PfoI	TCCNGGA	1 cut(s)	519
PkrI	GCNGC	9 cut(s)	88, 418, 709, 718, 733, 1092, 1162, 1270, 1623
PleI	GAGTC	2 cut(s)	163, 1799
PpsI	GAGTC	2 cut(s)	163, 1799
Ppu21I	YACGTR	1 cut(s)	1370
PscI	ACATGT	1 cut(s)	1351
PshAI	GACNNNNGTC	1 cut(s)	173
PsiI	TTATAA	1 cut(s)	924
Psp6I	CCWGG	4 cut(s)	188, 519, 667, 1660
PspGI	CCWGG	4 cut(s)	188, 519, 667, 1660
PspN4I	GGNNCC	7 cut(s)	165, 334, 406, 673, 810, 1657, 1843
PspPI	GGNCC	1 cut(s)	1841
PspXI	VCTCGAGB	1 cut(s)	228
PstI	CTGCAG	1 cut(s)	156
PsuI	RGATCY	6 cut(s)	163, 379, 523, 566, 808, 1199
PsyI	GACNNNGTC	1 cut(s)	368
RsaI	GTAC	7 cut(s)	302, 406, 673, 795, 1368, 1400, 1789
RsaNI	GTAC	7 cut(s)	301, 405, 672, 794, 1367, 1399, 1788
RseI	CAYNNNNRTG	1 cut(s)	1257
SapI	GCTCTTC	1 cut(s)	339
SaqAI	TTAA	3 cut(s)	969, 1113, 1136
SatI	GCNGC	9 cut(s)	87, 417, 708, 717, 732, 1091, 1161, 1269, 1622
Sau96I	GGNCC	1 cut(s)	1841
ScaI	AGTACT	1 cut(s)	302
SchI	GAGTC	2 cut(s)	163, 1799
ScrFI	CCNGG	4 cut(s)	190, 521, 669, 1662
SduI	GDGCHC	1 cut(s)	1649
SexAI	ACCWGGT	1 cut(s)	188
SfaNI	GCATC	3 cut(s)	1136, 1570, 1686
SfcI	CTRYAG	2 cut(s)	152, 998
Sfr274I	CTCGAG	1 cut(s)	228
SfuI	TTCGAA	1 cut(s)	1296
SinI	GGWCC	1 cut(s)	1841
SlaI	CTCGAG	1 cut(s)	228
SmiMI	CAYNNNNRTG	1 cut(s)	1257
SmlI	CTYRAG	1 cut(s)	228
SmoI	CTYRAG	1 cut(s)	228
Sse9I	AATT	7 cut(s)	263, 741, 1245, 1292, 1377, 1597, 1792
SseBI	AGGCCT	1 cut(s)	1212
SsiI	CCGC	4 cut(s)	27, 416, 1042, 1756
SspI	AATATT	1 cut(s)	892
SspMI	CTAG	1 cut(s)	131
StuI	AGGCCT	1 cut(s)	1212
StyD4I	CCNGG	4 cut(s)	188, 519, 667, 1660
StyI	CCWWGG	1 cut(s)	985
TaaI	ACNGT	5 cut(s)	317, 1002, 1235, 1256, 1644
TaiI	ACGT	4 cut(s)	23, 96, 445, 1372
TaqI	TCGA	3 cut(s)	96, 229, 1296
TasI	AATT	7 cut(s)	263, 741, 1245, 1292, 1377, 1597, 1792
TatI	WGTACW	1 cut(s)	300
TauI	GCSGC	1 cut(s)	419
TfiI	GAWTC	1 cut(s)	49
Tru1I	TTAA	3 cut(s)	969, 1113, 1136
Tru9I	TTAA	3 cut(s)	969, 1113, 1136
TscAI	CASTG	3 cut(s)	682, 1238, 1477
TseFI	GTSAC	2 cut(s)	101, 199
TseI	GCWGC	8 cut(s)	86, 707, 716, 731, 1090, 1160, 1268, 1621
Tsp45I	GTSAC	2 cut(s)	101, 199
TspDTI	ATGAA	4 cut(s)	17, 185, 809, 1766
TspGWI	ACGGA	2 cut(s)	28, 884
TspRI	CASTG	3 cut(s)	682, 1238, 1477
Tth111I	GACNNNGTC	1 cut(s)	368
Van91I	CCANNNNNTGG	1 cut(s)	563
VneI	GTGCAC	1 cut(s)	1645
VpaK11BI	GGWCC	1 cut(s)	1841
XapI	RAATTY	1 cut(s)	1292
XceI	RCATGY	1 cut(s)	1355
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1791
XhoI	CTCGAG	1 cut(s)	228
XmnI	GAANNNNTTC	1 cut(s)	1417
XspI	CTAG	1 cut(s)	131
ZraI	GACGTC	1 cut(s)	21
ZrmI	AGTACT	1 cut(s)	302

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.