pycom08g19230
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
19249414 .. 19255260
5847 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g19230.7

Sequence Viewer

Length: 1515 bp
ATGGACCCAACACTGATGACGTCATCCGCCTCTGCTTCTGCTTTTTGGCTGATTCTGCTGTTTGGCTTCTTTCACCTCCAGAAGCTTGCTGCCAACGTCGAAGGTGACGCATTGAATTCTTTGAAGAGCAATCTAGCTGATCCAAACAATGTTCTGCAGAGTTGGGATCCGACTCTCGTCAATCCCTGTACCTGGTTTCACGTCACTTGTAATAGCGAAAATAGCGTTACTCGAGTTGATCTGGGCAATGCCAATCTCTCTGGTCAACTGGTGGCACAGCTTGGTGTGCTTTCCAAGTTGCAGTACTTGGAACTTTACAGTAATAACATAACTGGAACCATTCCCCCAGAGCTTGGGGGTTTGTCAAACTTGGTGAGCTTGGATCTTTACTTGAACAATTTACATGGTACCATTCCAGAGACGCTTGGCAACCTTGAAAAACTACGTTTCCTGTATGAACCCCCATCCTTTTGTACGCGTCTCAACAACAACACCTTGGTGGGGAATATTCCCCTGACTTTGACTAACATCAAATCATTGCAAGTCCTGGATCTTTCAAATAACAATCTGACAGGGGATATTCCTGTCAATGGATCTTTTTCACTTTTTACTCCCATCAGTTTTCAAAATAATCCTCTTCTGAAACAACTTGCAGTCCCTCCACCTCCTCCCCCTTCTCCCCCACCAAGTTCTCCAGGCACCACTGCTACTGGGGCTATTGCTGGAGGGGTTGCTGCTGGTGCCGCTTTGCTGTTTGCTGCACCTGCAATTGCACTTGCTTTTTGGCGACGAAGAAAACCACAGGATCATTTCTTTGATGTACCTGCTGAGGAGGATCCAGAAGTTCATTTAGGACAGCTCAAAAGGTTTTCTTTGCGTGAGCTACAAGTTGCAACGGATACCTTTAGCAACAAAAATATTCTTGGTAGAGGTGGATTTGGTAAGGTTTATAAAGGACGTTTAGCTGATGGAACTCTGGTTGCTGTAAAAAGACTTAAAGAGGAGAGAACCCAAGGCGGGGAGCTACAGTTCCAAACAGAAGTTGAAATGATTAGCATGGCTGTCCACCGCAATCTGCTTCGTCTGCGTGGTTTTTGCATGACACCAACAGAAAGGCTGCTCGTATATCCTTATATGGCTAATGGAAGTGTGGCATCATGTTTAAGAGATCGTCCAGAAGAACAACCTGCACTTGATTGGCCAAAAAGACAATGCATTGCATTGGGTTCTGCAAGAGGCCTTGCTTATTTACATGATCACTGTGATCCAAAAATTATTCACCGTGATGTGAAAGCTGCAAACATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGACTTTGGATTGGCTAAACTCATGGACTACAAGGATACACATGTTACCACAGCTGTACGTGGCACAATTGGTCATATAGCACCAGAGTACCTTTCAACTGGAAAGTCTTCCGAGAAAACTGATGTTTTTGGATACGGAGTCATGCTTCTTGAACTCATCACTGGGCAGAGGGCTTGA

Protein Analysis

505

Amino Acids

54.99

Weight (kDa)

6.15

Isoelectric Point (pI)

42.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 951
AarI CACCTGC 1 cut(s) 772
AatII GACGTC 1 cut(s) 23
Acc36I ACCTGC 3 cut(s) 772, 832, 1195
Acc65I GGTACC 1 cut(s) 407
AccB1I GGYRCC 3 cut(s) 407, 698, 740
AccB7I CCANNNNNTGG 1 cut(s) 353
AccII CGCG 1 cut(s) 478
AciI CCGC 4 cut(s) 27, 744, 1017, 1069
AcoI YGGCCR 1 cut(s) 1199
AcsI RAATTY 2 cut(s) 115, 1319
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 7 cut(s) 190, 305, 409, 475, 822, 1395, 1427
AfiI CCNNNNNNNGG 6 cut(s) 192, 353, 501, 590, 1017, 1018
AflIII ACRYGT 2 cut(s) 476, 1378
AjiI CACGTC 1 cut(s) 202
AjnI CCWGG 3 cut(s) 191, 546, 694
AjuI GAANNNNNNNTTGG 2 cut(s) 1317, 1349
AleI CACNNNNGTG 1 cut(s) 497
AloI GAACNNNNNNTCC 2 cut(s) 1013, 1045
Alw26I GTCTC 3 cut(s) 413, 485, 1332
Ama87I CYCGRG 1 cut(s) 231
AoxI GGCC 2 cut(s) 1199, 1237
ApeKI GCWGC 5 cut(s) 89, 734, 758, 1117, 1295
ApoI RAATTY 2 cut(s) 115, 1319
Asp700I GAANNNNTTC 1 cut(s) 1444
Asp718I GGTACC 1 cut(s) 407
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 4 cut(s) 65, 116, 385, 1271
AvaI CYCGRG 1 cut(s) 231
AvaII GGWCC 1 cut(s) 4
BaeI ACNNNNGTAYC 4 cut(s) 1365, 1398, 1409, 1442
BalI TGGCCA 1 cut(s) 1201
BamHI GGATCC 2 cut(s) 166, 835
BanI GGYRCC 3 cut(s) 407, 698, 740
BbsI GAAGAC 1 cut(s) 1437
BbvCI CCTCAGC 1 cut(s) 828
BbvI GCAGC 5 cut(s) 76, 721, 745, 1104, 1282
BccI CCATC 3 cut(s) 472, 623, 962
BciT130I CCWGG 3 cut(s) 193, 548, 696
BciVI GTATCC 3 cut(s) 892, 1366, 1463
BclI TGATCA 1 cut(s) 1255
BcoDI GTCTC 3 cut(s) 413, 485, 1332
BfaI CTAG 1 cut(s) 134
BfmI CTRYAG 2 cut(s) 155, 1025
BfuAI ACCTGC 3 cut(s) 772, 832, 1195
BfuI GTATCC 3 cut(s) 892, 1366, 1463
BisI GCNGC 6 cut(s) 90, 735, 744, 759, 1118, 1296
BlsI GCNGC 6 cut(s) 91, 736, 745, 760, 1119, 1297
BmcAI AGTACT 1 cut(s) 305
Bme1390I CCNGG 3 cut(s) 193, 548, 696
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 231
BmgBI CACGTC 1 cut(s) 202
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 7 cut(s) 6, 168, 337, 409, 700, 742, 837
BmrFI CCNGG 3 cut(s) 193, 548, 696
BmrI ACTGGG 2 cut(s) 720, 1509
BmsI GCATC 1 cut(s) 1163
BmuI ACTGGG 2 cut(s) 720, 1509
BoxI GACNNNNGTC 1 cut(s) 176
BpiI GAAGAC 1 cut(s) 1437
BpmI CTGGAG 3 cut(s) 62, 678, 744
Bpu10I CCTNAGC 1 cut(s) 828
BsaAI YACGTR 1 cut(s) 1397
BsaHI GRCGYC 1 cut(s) 20
BsaJI CCNNGG 2 cut(s) 495, 1012
BsaXI ACNNNNNCTCC 2 cut(s) 1013, 1043
Bsc4I CCNNNNNNNGG 6 cut(s) 192, 353, 501, 590, 1017, 1018
Bse1I ACTGG 5 cut(s) 273, 337, 715, 1441, 1504
Bse3DI GCAATG 3 cut(s) 253, 536, 1215
BseBI CCWGG 3 cut(s) 193, 548, 696
BseDI CCNNGG 2 cut(s) 495, 1012
BseGI GGATG 3 cut(s) 23, 464, 1318
BseLI CCNNNNNNNGG 6 cut(s) 192, 353, 501, 590, 1017, 1018
BseMI GCAATG 3 cut(s) 253, 536, 1215
BseMII CTCAG 1 cut(s) 819
BseNI ACTGG 5 cut(s) 273, 337, 715, 1441, 1504
BseRI GAGGAG 3 cut(s) 657, 845, 1016
BseXI GCAGC 5 cut(s) 76, 721, 745, 1104, 1282
BsgI GTGCAG 2 cut(s) 744, 1173
Bsh1236I CGCG 1 cut(s) 478
BshFI GGCC 2 cut(s) 1201, 1239
BshNI GGYRCC 3 cut(s) 407, 698, 740
BsiHKCI CYCGRG 1 cut(s) 231
BslFI GGGAC 1 cut(s) 641
BslI CCNNNNNNNGG 6 cut(s) 192, 353, 501, 590, 1017, 1018
BsmAI GTCTC 3 cut(s) 413, 485, 1332
BsmBI CGTCTC 2 cut(s) 413, 485
BsmFI GGGAC 1 cut(s) 641
BsnI GGCC 2 cut(s) 1201, 1239
BsoBI CYCGRG 1 cut(s) 231
BspACI CCGC 4 cut(s) 27, 744, 1017, 1069
BspANI GGCC 2 cut(s) 1201, 1239
BspCNI CTCAG 1 cut(s) 820
BspFNI CGCG 1 cut(s) 478
BspLI GGNNCC 7 cut(s) 6, 168, 337, 409, 700, 742, 837
BspMAI CTGCAG 1 cut(s) 159
BspMI ACCTGC 3 cut(s) 772, 832, 1195
BspQI GCTCTTC 1 cut(s) 119
BspT107I GGYRCC 3 cut(s) 407, 698, 740
BsrDI GCAATG 3 cut(s) 253, 536, 1215
BsrI ACTGG 5 cut(s) 273, 337, 715, 1441, 1504
BssECI CCNNGG 2 cut(s) 495, 1012
BssNI GRCGYC 1 cut(s) 20
BssT1I CCWWGG 2 cut(s) 495, 1012
Bst2UI CCWGG 3 cut(s) 193, 548, 696
Bst4CI ACNGT 4 cut(s) 320, 1029, 1262, 1283
Bst6I CTCTTC 2 cut(s) 119, 642
BstACI GRCGYC 1 cut(s) 20
BstBAI YACGTR 1 cut(s) 1397
BstC8I GCNNGC 1 cut(s) 87
BstDEI CTNAG 1 cut(s) 828
BstF5I GGATG 3 cut(s) 23, 464, 1318
BstFNI CGCG 1 cut(s) 478
BstMAI GTCTC 3 cut(s) 413, 485, 1332
BstMWI GCNNNNNNNGC 8 cut(s) 55, 222, 286, 713, 740, 743, 764, 1084
BstNI CCWGG 3 cut(s) 193, 548, 696
BstNSI RCATGY 1 cut(s) 1382
BstPAI GACNNNNGTC 1 cut(s) 176
BstSCI CCNGG 3 cut(s) 191, 546, 694
BstSFI CTRYAG 2 cut(s) 155, 1025
BstUI CGCG 1 cut(s) 478
BstV1I GCAGC 5 cut(s) 76, 721, 745, 1104, 1282
BstV2I GAAGAC 1 cut(s) 1437
BstX2I RGATCY 5 cut(s) 166, 382, 550, 593, 835
BstYI RGATCY 5 cut(s) 166, 382, 550, 593, 835
BsuI GTATCC 3 cut(s) 892, 1366, 1463
BsuRI GGCC 2 cut(s) 1201, 1239
BtrI CACGTC 1 cut(s) 202
BtsCI GGATG 3 cut(s) 23, 464, 1318
BtsI GCAGTG 1 cut(s) 702
BtsIMutI CAGTG 4 cut(s) 11, 702, 1258, 1497
BveI ACCTGC 3 cut(s) 772, 832, 1195
Cac8I GCNNGC 1 cut(s) 87
Cfr13I GGNCC 1 cut(s) 4
CseI GACGC 3 cut(s) 116, 430, 467
CsiI ACCWGGT 1 cut(s) 191
Csp6I GTAC 7 cut(s) 189, 304, 408, 474, 821, 1394, 1426
CviAII CATG 8 cut(s) 404, 1057, 1099, 1158, 1253, 1360, 1379, 1480
CviQI GTAC 7 cut(s) 189, 304, 408, 474, 821, 1394, 1426
DdeI CTNAG 1 cut(s) 828
EaeI YGGCCR 1 cut(s) 1199
Eam1104I CTCTTC 2 cut(s) 119, 642
EarI CTCTTC 2 cut(s) 119, 642
EciI GGCGGA 1 cut(s) 16
Eco130I CCWWGG 2 cut(s) 495, 1012
Eco147I AGGCCT 1 cut(s) 1239
Eco47I GGWCC 1 cut(s) 4
Eco88I CYCGRG 1 cut(s) 231
EcoRI GAATTC 1 cut(s) 115
EcoRII CCWGG 3 cut(s) 191, 546, 694
EcoT14I CCWWGG 2 cut(s) 495, 1012
EcoT22I ATGCAT 1 cut(s) 1217
ErhI CCWWGG 2 cut(s) 495, 1012
Esp3I CGTCTC 2 cut(s) 413, 485
FaeI CATG 8 cut(s) 407, 1060, 1102, 1161, 1256, 1363, 1382, 1483
FalI AAGNNNNNCTT 2 cut(s) 856, 888
FaqI GGGAC 1 cut(s) 641
FatI CATG 8 cut(s) 403, 1056, 1098, 1157, 1252, 1359, 1378, 1479
FauI CCCGC 1 cut(s) 1010
FbaI TGATCA 1 cut(s) 1255
Fnu4HI GCNGC 6 cut(s) 90, 735, 744, 759, 1118, 1296
FokI GGATG 3 cut(s) 10, 451, 1325
Fsp4HI GCNGC 6 cut(s) 90, 735, 744, 759, 1118, 1296
FspBI CTAG 1 cut(s) 134
GluI GCNGC 6 cut(s) 90, 735, 744, 759, 1118, 1296
GsuI CTGGAG 3 cut(s) 62, 678, 744
HaeIII GGCC 2 cut(s) 1201, 1239
HgaI GACGC 3 cut(s) 116, 430, 467
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 8 cut(s) 407, 1060, 1102, 1161, 1256, 1363, 1382, 1483
HincII GTYRAC 1 cut(s) 266
HindII GTYRAC 1 cut(s) 266
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 3 cut(s) 52, 172, 1476
HphI GGTGA 4 cut(s) 65, 116, 385, 1271
Hpy166II GTNNAC 2 cut(s) 266, 1066
Hpy188I TCNGA 4 cut(s) 171, 570, 642, 1450
Hpy188III TCNNGA 5 cut(s) 79, 416, 839, 1175, 1487
Hpy8I GTNNAC 2 cut(s) 266, 1066
Hpy99I CGWCG 2 cut(s) 101, 792
HpyAV CCTTC 2 cut(s) 95, 684
HpyCH4III ACNGT 4 cut(s) 320, 1029, 1262, 1283
HpyCH4IV ACGT 6 cut(s) 20, 96, 201, 445, 958, 1396
HpyF10VI GCNNNNNNNGC 8 cut(s) 55, 222, 286, 713, 740, 743, 764, 1084
HpyF3I CTNAG 1 cut(s) 828
HpySE526I ACGT 6 cut(s) 20, 96, 201, 445, 958, 1396
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 8 cut(s) 407, 1060, 1102, 1161, 1256, 1363, 1382, 1483
KpnI GGTACC 1 cut(s) 411
Ksp22I TGATCA 1 cut(s) 1255
LguI GCTCTTC 1 cut(s) 119
LmnI GCTCC 1 cut(s) 1021
Lsp1109I GCAGC 5 cut(s) 76, 721, 745, 1104, 1282
LweI GCATC 1 cut(s) 1163
MabI ACCWGGT 1 cut(s) 191
MaeI CTAG 1 cut(s) 134
MaeII ACGT 6 cut(s) 20, 96, 201, 445, 958, 1396
MaeIII GTNAC 4 cut(s) 104, 202, 226, 1381
MboII GAAGA 5 cut(s) 136, 629, 804, 1190, 1437
MfeI CAATTG 2 cut(s) 768, 1404
MflI RGATCY 5 cut(s) 166, 382, 550, 593, 835
MlsI TGGCCA 1 cut(s) 1201
MluCI AATT 6 cut(s) 115, 397, 768, 1272, 1319, 1404
MluI ACGCGT 1 cut(s) 476
MluNI TGGCCA 1 cut(s) 1201
MlyI GAGTC 2 cut(s) 166, 1485
MmeI TCCRAC 3 cut(s) 194, 1290, 1315
Mox20I TGGCCA 1 cut(s) 1201
Mph1103I ATGCAT 1 cut(s) 1217
MroXI GAANNNNTTC 1 cut(s) 1444
MscI TGGCCA 1 cut(s) 1201
MseI TTAA 2 cut(s) 996, 1163
MslI CAYNNNNRTG 2 cut(s) 497, 1284
Msp20I TGGCCA 1 cut(s) 1201
MspA1I CMGCKG 1 cut(s) 1391
MspR9I CCNGG 3 cut(s) 193, 548, 696
MunI CAATTG 2 cut(s) 768, 1404
MvaI CCWGG 3 cut(s) 193, 548, 696
MvnI CGCG 1 cut(s) 478
MwoI GCNNNNNNNGC 8 cut(s) 55, 222, 286, 713, 740, 743, 764, 1084
NlaIII CATG 8 cut(s) 407, 1060, 1102, 1161, 1256, 1363, 1382, 1483
NlaIV GGNNCC 7 cut(s) 6, 168, 337, 409, 700, 742, 837
NmuCI GTSAC 2 cut(s) 104, 202
NsiI ATGCAT 1 cut(s) 1217
NspI RCATGY 1 cut(s) 1382
OliI CACNNNNGTG 1 cut(s) 497
PaeR7I CTCGAG 1 cut(s) 231
PaqCI CACCTGC 1 cut(s) 772
PceI AGGCCT 1 cut(s) 1239
PciI ACATGT 1 cut(s) 1378
PciSI GCTCTTC 1 cut(s) 119
PdmI GAANNNNTTC 1 cut(s) 1444
PfeI GAWTC 1 cut(s) 52
PflMI CCANNNNNTGG 1 cut(s) 353
PfoI TCCNGGA 1 cut(s) 546
PkrI GCNGC 6 cut(s) 91, 736, 745, 760, 1119, 1297
PleI GAGTC 2 cut(s) 166, 1484
PpsI GAGTC 2 cut(s) 166, 1484
Ppu21I YACGTR 1 cut(s) 1397
PscI ACATGT 1 cut(s) 1378
PshAI GACNNNNGTC 1 cut(s) 176
PsiI TTATAA 1 cut(s) 951
Psp6I CCWGG 3 cut(s) 191, 546, 694
PspGI CCWGG 3 cut(s) 191, 546, 694
PspN4I GGNNCC 7 cut(s) 6, 168, 337, 409, 700, 742, 837
PspPI GGNCC 1 cut(s) 4
PspXI VCTCGAGB 1 cut(s) 231
PstI CTGCAG 1 cut(s) 159
PsuI RGATCY 5 cut(s) 166, 382, 550, 593, 835
PvuII CAGCTG 1 cut(s) 1391
RsaI GTAC 7 cut(s) 190, 305, 409, 475, 822, 1395, 1427
RsaNI GTAC 7 cut(s) 189, 304, 408, 474, 821, 1394, 1426
RseI CAYNNNNRTG 2 cut(s) 497, 1284
SapI GCTCTTC 1 cut(s) 119
SaqAI TTAA 2 cut(s) 996, 1163
SatI GCNGC 6 cut(s) 90, 735, 744, 759, 1118, 1296
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 305
SchI GAGTC 2 cut(s) 166, 1485
ScrFI CCNGG 3 cut(s) 193, 548, 696
SexAI ACCWGGT 1 cut(s) 191
SfaNI GCATC 1 cut(s) 1163
SfcI CTRYAG 2 cut(s) 155, 1025
Sfr274I CTCGAG 1 cut(s) 231
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 231
SmiMI CAYNNNNRTG 2 cut(s) 497, 1284
SmlI CTYRAG 1 cut(s) 231
SmoI CTYRAG 1 cut(s) 231
Sse9I AATT 6 cut(s) 115, 397, 768, 1272, 1319, 1404
SseBI AGGCCT 1 cut(s) 1239
SsiI CCGC 4 cut(s) 27, 744, 1017, 1069
SspI AATATT 2 cut(s) 508, 919
SspMI CTAG 1 cut(s) 134
StuI AGGCCT 1 cut(s) 1239
StyD4I CCNGG 3 cut(s) 191, 546, 694
StyI CCWWGG 2 cut(s) 495, 1012
TaaI ACNGT 4 cut(s) 320, 1029, 1262, 1283
TaiI ACGT 6 cut(s) 23, 99, 204, 448, 961, 1399
TaqI TCGA 2 cut(s) 99, 232
TasI AATT 6 cut(s) 115, 397, 768, 1272, 1319, 1404
TatI WGTACW 1 cut(s) 303
TauI GCSGC 1 cut(s) 746
TfiI GAWTC 1 cut(s) 52
Tru1I TTAA 2 cut(s) 996, 1163
Tru9I TTAA 2 cut(s) 996, 1163
TscAI CASTG 4 cut(s) 18, 709, 1265, 1504
TseFI GTSAC 2 cut(s) 104, 202
TseI GCWGC 5 cut(s) 89, 734, 758, 1117, 1295
Tsp45I GTSAC 2 cut(s) 104, 202
TspDTI ATGAA 2 cut(s) 471, 836
TspGWI ACGGA 2 cut(s) 911, 1488
TspRI CASTG 4 cut(s) 18, 709, 1265, 1504
Van91I CCANNNNNTGG 1 cut(s) 353
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 2 cut(s) 115, 1319
XceI RCATGY 1 cut(s) 1382
XhoI CTCGAG 1 cut(s) 231
XmnI GAANNNNTTC 1 cut(s) 1444
XspI CTAG 1 cut(s) 134
ZraI GACGTC 1 cut(s) 21
ZrmI AGTACT 1 cut(s) 305
Zsp2I ATGCAT 1 cut(s) 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.