Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003522

Physical Location & Seq

Genomic Coordinates Forward (+)

45605494 .. 45607487

Gene Structure 1994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G558800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1137 bp

ATGGGGTGCATGTTTTACTTACGTATAAACTGTGCAGCGGACGAGGATCCAGAAGTCGATTTCACACAGATCAGAAGGCCTGCAGCGGACGAGGATCGAGAAGTCAATTTCCGACAGCTCAGAAGGTATTCTTTGCATGAGCTACAAGTCGCAACAGATACCTTTAGCCATAAAAATATTCTAGGTAGAGGTGGATTTGGTACGGTTTATAAAGGACGTTTAGCTGATGGGACTCTGGTGGCTGTAAAAAGACTCAAAGCAGAGAAAACACAAGGTGAGGAGCTACAGTTCCAAACAGAAGTTGGACTGATTACCATGGCTGTCCACCGCAATCTGCTTCGTCTGCGCGGATTTTGCATGACACAAACAGAAAGGCTGCTTGTATATCCTTATATGGCTAATGGAAGTGTAGCATCATGTTTAAGAGATCGTACAGAAGCACAGCCTCCACTTGATTGGGAAAAAAGAAAACGCATCGCATTGGGATCTGCAAGAGGCCTTGCTTATTTACATGATCACTGTGATCCGAAAATTATTCACCGTGATGTGAAAGCTGCAAACATATTGTTAGATGAGGAATTCGAAGCAGTTGTTGGAGACTTTGGATTGGCCAAACTCATGGATTACAAGGATACACACGTTACCACAGCTGTACGTGGCACAATGGGTCATATAGCGCCGGAGTATCTCTCAACTGGAAAGTCATCAGAGAAAACTGATGTTTTTGGATATGGAGTCATGCTTCTTGAACTTGTCACTGGGAAGACGGCTTTTCATCTTGCTCTGCTTGCAAATAATGATGATGTCTTGTTATTTGATTGGGTCAAAGGACTATTGAAAGATCGGAGATTGGAAGCATTTGTTGATCCTGATCTAAAGGGTTACTATATTGACGAGGAGGTGGAGCAGCTGATCCAAGTAGCGCTACTCTGCACACAAGGCTCCCCAGGGAAACGGCTCAAGATGTCTGAGGTTGTCCAAATGCTTGGAGGTGATGGTTTGGCTGAAAGATGGGAGGCCTGGCAGAAAGAGGAGATGTTCGACCAAGACTTCAACCCTATTCAACATGCAAGTACGAATTGGATCATGGACTCTAGTTCTCAAATTCCACCCGATGTGTTGTCCGGTCCCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0008219 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010008 GO:0010033 GO:0010200 GO:0010243 GO:0010941 GO:0012505 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031090 GO:0031410 GO:0031982 GO:0032870 GO:0033612 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048545 GO:0048580 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051716 GO:0060089 GO:0060548 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0097708 GO:0098588 GO:0098805 GO:0140096 GO:1900140 GO:1901564 GO:1901698 GO:1901700 GO:1901701 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04626 map04016 map04075 map04626

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

379

Amino Acids

42.7

Weight (kDa)

5.56

Isoelectric Point (pI)

42.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13790 AT2G13800 AT2G13800 AT2G13800 AT2G13800 AT4G33430 AT4G33430
fragaria_vesca	FvH4_5g30840 FvH4_5g30840
malus_domestica	MD08G1221700.v1.1 MD15G1412700.v1.1 MD15G1413000.v1.1 MD15G1413200.v1.1 MD15G1413300.v1.1 MD15G1414000.v1.1
prunus_persica	Prupe.1G558800_v2.0.a1 Prupe.1G558900_v2.0.a1 Prupe.1G558900_v2.0.a1 Prupe.1G558900_v2.0.a1
pyrus_communis	pycom08g19230 pycom15g36730 pycom15g36740 pycom15g36780 pycom15g36820
rosa_chinensis	RchiOBHm_Chr7g0225981
rosa_laevigata	RLG00000001775
rosa_multiflora	Rmu_sc0002092.1_g000002 Rmu_sc0014767.1_g000001
rosa_roxburghii	Rroxscaffold_3G00233340
rosa_rugosa	Rorug07G0233900
rosa_samantha	Rh7AG369400 Rh7BG367900 Rh7CG387800 Rh7DG378900
rosa_wichuraiana	Rw0G020960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	210
AccII	CGCG	1 cut(s)	348
AciI	CCGC	4 cut(s)	38, 86, 328, 348
AclWI	GGATC	8 cut(s)	41, 54, 102, 493, 518, 860, 907, 1091
AcoI	YGGCCR	1 cut(s)	609
AcsI	RAATTY	2 cut(s)	578, 1104
AdeI	CACNNNGTG	1 cut(s)	275
AfaI	GTAC	4 cut(s)	202, 433, 654, 1075
AfeI	AGCGCT	1 cut(s)	924
AfiI	CCNNNNNNNGG	1 cut(s)	1131
AflIII	ACRYGT	1 cut(s)	637
AgsI	TTSAA	4 cut(s)	749, 838, 1054, 1064
AjnI	CCWGG	3 cut(s)	946, 1019, 1130
AjuI	GAANNNNNNNTTGG	2 cut(s)	576, 608
AloI	GAACNNNNNNTCC	2 cut(s)	272, 304
AluBI	AGCT	7 cut(s)	118, 142, 224, 283, 554, 650, 910
AluI	AGCT	7 cut(s)	118, 142, 224, 283, 554, 650, 910
Alw26I	GTCTC	1 cut(s)	591
AlwI	GGATC	8 cut(s)	41, 54, 102, 493, 518, 860, 907, 1091
Aor51HI	AGCGCT	1 cut(s)	924
AoxI	GGCC	4 cut(s)	77, 496, 609, 1017
ApeKI	GCWGC	5 cut(s)	35, 83, 376, 554, 907
ApoI	RAATTY	2 cut(s)	578, 1104
Asp700I	GAANNNNTTC	1 cut(s)	127
AspLEI	GCGC	3 cut(s)	348, 679, 925
AspS9I	GGNCC	1 cut(s)	1127
AsuHPI	GGTGA	3 cut(s)	287, 530, 1004
AsuII	TTCGAA	1 cut(s)	582
AvaII	GGWCC	1 cut(s)	1127
BaeI	ACNNNNGTAYC	2 cut(s)	624, 657
BalI	TGGCCA	1 cut(s)	611
BamHI	GGATCC	1 cut(s)	46
BbsI	GAAGAC	1 cut(s)	770
BbvI	GCAGC	5 cut(s)	47, 95, 363, 541, 919
BccI	CCATC	3 cut(s)	221, 989, 1005
BceAI	ACGGC	2 cut(s)	783, 971
BciT130I	CCWGG	3 cut(s)	948, 1021, 1132
BciVI	GTATCC	1 cut(s)	625
BclI	TGATCA	1 cut(s)	514
BcoDI	GTCTC	1 cut(s)	591
BfaI	CTAG	2 cut(s)	182, 1095
BfmI	CTRYAG	2 cut(s)	81, 284
BfoI	RGCGCY	2 cut(s)	680, 926
BfuI	GTATCC	1 cut(s)	625
BisI	GCNGC	5 cut(s)	36, 84, 377, 555, 908
BlsI	GCNGC	5 cut(s)	37, 85, 378, 556, 909
Bme1390I	CCNGG	3 cut(s)	948, 1021, 1132
Bme18I	GGWCC	1 cut(s)	1127
BmgT120I	GGNCC	1 cut(s)	1127
BmiI	GGNNCC	3 cut(s)	48, 943, 1129
BmrFI	CCNGG	3 cut(s)	948, 1021, 1132
BmrI	ACTGGG	1 cut(s)	768
BmsI	GCATC	2 cut(s)	422, 483
BmuI	ACTGGG	1 cut(s)	768
BpiI	GAAGAC	1 cut(s)	770
BplI	GAGNNNNNCTC	2 cut(s)	674, 706
Bpu14I	TTCGAA	1 cut(s)	582
BpuEI	CTTGAG	1 cut(s)	944
BsaAI	YACGTR	2 cut(s)	23, 656
BsaBI	GATNNNNATC	1 cut(s)	870
BsaJI	CCNNGG	4 cut(s)	315, 946, 947, 1130
BsaWI	WCCGGW	1 cut(s)	1124
BsaXI	ACNNNNNCTCC	2 cut(s)	272, 302
Bsc4I	CCNNNNNNNGG	1 cut(s)	1131
Bse1I	ACTGG	2 cut(s)	700, 763
Bse8I	GATNNNNATC	1 cut(s)	870
BseBI	CCWGG	3 cut(s)	948, 1021, 1132
BseDI	CCNNGG	4 cut(s)	315, 946, 947, 1130
BseJI	GATNNNNATC	1 cut(s)	870
BseLI	CCNNNNNNNGG	1 cut(s)	1131
BseMII	CTCAG	2 cut(s)	133, 960
BseNI	ACTGG	2 cut(s)	700, 763
BseRI	GAGGAG	3 cut(s)	293, 911, 1046
BseXI	GCAGC	5 cut(s)	47, 95, 363, 541, 919
BsgI	GTGCAG	2 cut(s)	54, 916
Bsh1236I	CGCG	1 cut(s)	348
BshFI	GGCC	4 cut(s)	79, 498, 611, 1019
BsiSI	CCGG	2 cut(s)	680, 1125
BslFI	GGGAC	2 cut(s)	244, 1113
BslI	CCNNNNNNNGG	1 cut(s)	1131
BsmAI	GTCTC	1 cut(s)	591
BsmFI	GGGAC	2 cut(s)	244, 1113
BsnI	GGCC	4 cut(s)	79, 498, 611, 1019
Bsp119I	TTCGAA	1 cut(s)	582
Bsp19I	CCATGG	1 cut(s)	315
BspACI	CCGC	4 cut(s)	38, 86, 328, 348
BspANI	GGCC	4 cut(s)	79, 498, 611, 1019
BspCNI	CTCAG	2 cut(s)	132, 961
BspFNI	CGCG	1 cut(s)	348
BspLI	GGNNCC	3 cut(s)	48, 943, 1129
BspMAI	CTGCAG	1 cut(s)	85
BspPI	GGATC	8 cut(s)	41, 54, 102, 493, 518, 860, 907, 1091
BspT104I	TTCGAA	1 cut(s)	582
BsrI	ACTGG	2 cut(s)	700, 763
BssECI	CCNNGG	4 cut(s)	315, 946, 947, 1130
BssT1I	CCWWGG	1 cut(s)	315
Bst2UI	CCWGG	3 cut(s)	948, 1021, 1132
Bst4CI	ACNGT	5 cut(s)	32, 205, 288, 521, 542
BstBAI	YACGTR	2 cut(s)	23, 656
BstBI	TTCGAA	1 cut(s)	582
BstC8I	GCNNGC	2 cut(s)	81, 789
BstDEI	CTNAG	2 cut(s)	119, 969
BstDSI	CCRYGG	1 cut(s)	315
BstFNI	CGCG	1 cut(s)	348
BstH2I	RGCGCY	2 cut(s)	680, 926
BstHHI	GCGC	3 cut(s)	348, 679, 925
BstMAI	GTCTC	1 cut(s)	591
BstMWI	GCNNNNNNNGC	4 cut(s)	343, 354, 788, 939
BstNI	CCWGG	3 cut(s)	948, 1021, 1132
BstNSI	RCATGY	2 cut(s)	13, 1070
BstSCI	CCNGG	3 cut(s)	946, 1019, 1130
BstSFI	CTRYAG	2 cut(s)	81, 284
BstSNI	TACGTA	1 cut(s)	23
BstUI	CGCG	1 cut(s)	348
BstV1I	GCAGC	5 cut(s)	47, 95, 363, 541, 919
BstV2I	GAAGAC	1 cut(s)	770
BstX2I	RGATCY	2 cut(s)	46, 485
BstXI	CCANNNNNNTGG	3 cut(s)	456, 619, 986
BstYI	RGATCY	2 cut(s)	46, 485
BsuI	GTATCC	1 cut(s)	625
BsuRI	GGCC	4 cut(s)	79, 498, 611, 1019
BtgI	CCRYGG	1 cut(s)	315
BtgZI	GCGATG	1 cut(s)	460
BtsIMutI	CAGTG	2 cut(s)	517, 756
Cac8I	GCNNGC	2 cut(s)	81, 789
CfoI	GCGC	3 cut(s)	348, 679, 925
Cfr13I	GGNCC	1 cut(s)	1127
Csp6I	GTAC	4 cut(s)	201, 432, 653, 1074
CviQI	GTAC	4 cut(s)	201, 432, 653, 1074
DdeI	CTNAG	2 cut(s)	119, 969
DraIII	CACNNNGTG	1 cut(s)	275
EaeI	YGGCCR	1 cut(s)	609
Eco105I	TACGTA	1 cut(s)	23
Eco130I	CCWWGG	1 cut(s)	315
Eco147I	AGGCCT	3 cut(s)	79, 498, 1019
Eco47I	GGWCC	1 cut(s)	1127
Eco47III	AGCGCT	1 cut(s)	924
EcoRI	GAATTC	1 cut(s)	578
EcoRII	CCWGG	3 cut(s)	946, 1019, 1130
EcoT14I	CCWWGG	1 cut(s)	315
ErhI	CCWWGG	1 cut(s)	315
FalI	AAGNNNNNCTT	2 cut(s)	115, 147
FaqI	GGGAC	2 cut(s)	244, 1113
FbaI	TGATCA	1 cut(s)	514
Fnu4HI	GCNGC	5 cut(s)	36, 84, 377, 555, 908
Fsp4HI	GCNGC	5 cut(s)	36, 84, 377, 555, 908
FspBI	CTAG	2 cut(s)	182, 1095
GlaI	GCGC	3 cut(s)	347, 678, 924
GluI	GCNGC	5 cut(s)	36, 84, 377, 555, 908
HaeII	RGCGCY	2 cut(s)	680, 926
HaeIII	GGCC	4 cut(s)	79, 498, 611, 1019
HapII	CCGG	2 cut(s)	680, 1125
HhaI	GCGC	3 cut(s)	348, 679, 925
Hin6I	GCGC	3 cut(s)	346, 677, 923
HinP1I	GCGC	3 cut(s)	346, 677, 923
HinfI	GANTC	4 cut(s)	232, 252, 735, 1091
HpaII	CCGG	2 cut(s)	680, 1125
HphI	GGTGA	3 cut(s)	287, 530, 1004
Hpy166II	GTNNAC	1 cut(s)	325
Hpy188I	TCNGA	7 cut(s)	74, 113, 122, 528, 709, 846, 970
Hpy188III	TCNNGA	5 cut(s)	50, 98, 746, 869, 961
Hpy8I	GTNNAC	1 cut(s)	325
HpyAV	CCTTC	2 cut(s)	69, 117
HpyCH4III	ACNGT	5 cut(s)	32, 205, 288, 521, 542
HpyCH4IV	ACGT	4 cut(s)	22, 217, 639, 655
HpyF10VI	GCNNNNNNNGC	4 cut(s)	343, 354, 788, 939
HpyF3I	CTNAG	2 cut(s)	119, 969
HpySE526I	ACGT	4 cut(s)	22, 217, 639, 655
HspAI	GCGC	3 cut(s)	346, 677, 923
Ksp22I	TGATCA	1 cut(s)	514
LmnI	GCTCC	3 cut(s)	280, 904, 947
Lsp1109I	GCAGC	5 cut(s)	47, 95, 363, 541, 919
LweI	GCATC	2 cut(s)	422, 483
MaeI	CTAG	2 cut(s)	182, 1095
MaeII	ACGT	4 cut(s)	22, 217, 639, 655
MaeIII	GTNAC	3 cut(s)	640, 754, 881
MboII	GAAGA	1 cut(s)	775
MflI	RGATCY	2 cut(s)	46, 485
MlsI	TGGCCA	1 cut(s)	611
MluCI	AATT	5 cut(s)	106, 531, 578, 1078, 1104
MluNI	TGGCCA	1 cut(s)	611
MlyI	GAGTC	4 cut(s)	226, 246, 744, 1085
MmeI	TCCRAC	3 cut(s)	136, 283, 574
Mox20I	TGGCCA	1 cut(s)	611
MroXI	GAANNNNTTC	1 cut(s)	127
MscI	TGGCCA	1 cut(s)	611
MseI	TTAA	1 cut(s)	422
MslI	CAYNNNNRTG	1 cut(s)	543
Msp20I	TGGCCA	1 cut(s)	611
MspA1I	CMGCKG	4 cut(s)	38, 86, 650, 910
MspI	CCGG	2 cut(s)	680, 1125
MspR9I	CCNGG	3 cut(s)	948, 1021, 1132
MvaI	CCWGG	3 cut(s)	948, 1021, 1132
MvnI	CGCG	1 cut(s)	348
MwoI	GCNNNNNNNGC	4 cut(s)	343, 354, 788, 939
NcoI	CCATGG	1 cut(s)	315
NlaIV	GGNNCC	3 cut(s)	48, 943, 1129
NmuCI	GTSAC	1 cut(s)	754
NspI	RCATGY	2 cut(s)	13, 1070
NspV	TTCGAA	1 cut(s)	582
PasI	CCCWGGG	1 cut(s)	947
PceI	AGGCCT	3 cut(s)	79, 498, 1019
PdmI	GAANNNNTTC	1 cut(s)	127
PkrI	GCNGC	5 cut(s)	37, 85, 378, 556, 909
PleI	GAGTC	4 cut(s)	226, 246, 743, 1085
PpsI	GAGTC	4 cut(s)	226, 246, 743, 1085
Ppu21I	YACGTR	2 cut(s)	23, 656
PsiI	TTATAA	1 cut(s)	210
Psp6I	CCWGG	3 cut(s)	946, 1019, 1130
PspGI	CCWGG	3 cut(s)	946, 1019, 1130
PspN4I	GGNNCC	3 cut(s)	48, 943, 1129
PspPI	GGNCC	1 cut(s)	1127
PstI	CTGCAG	1 cut(s)	85
PsuI	RGATCY	2 cut(s)	46, 485
PvuII	CAGCTG	2 cut(s)	650, 910
RsaI	GTAC	4 cut(s)	202, 433, 654, 1075
RsaNI	GTAC	4 cut(s)	201, 432, 653, 1074
RseI	CAYNNNNRTG	1 cut(s)	543
SaqAI	TTAA	1 cut(s)	422
SatI	GCNGC	5 cut(s)	36, 84, 377, 555, 908
Sau96I	GGNCC	1 cut(s)	1127
SchI	GAGTC	4 cut(s)	226, 246, 744, 1085
ScrFI	CCNGG	3 cut(s)	948, 1021, 1132
SfaNI	GCATC	2 cut(s)	422, 483
SfcI	CTRYAG	2 cut(s)	81, 284
SfuI	TTCGAA	1 cut(s)	582
SinI	GGWCC	1 cut(s)	1127
SmiMI	CAYNNNNRTG	1 cut(s)	543
SmlI	CTYRAG	1 cut(s)	959
SmoI	CTYRAG	1 cut(s)	959
SnaBI	TACGTA	1 cut(s)	23
Sse9I	AATT	5 cut(s)	106, 531, 578, 1078, 1104
SseBI	AGGCCT	3 cut(s)	79, 498, 1019
SsiI	CCGC	4 cut(s)	38, 86, 328, 348
SspI	AATATT	1 cut(s)	178
SspMI	CTAG	2 cut(s)	182, 1095
StuI	AGGCCT	3 cut(s)	79, 498, 1019
StyD4I	CCNGG	3 cut(s)	946, 1019, 1130
StyI	CCWWGG	1 cut(s)	315
TaaI	ACNGT	5 cut(s)	32, 205, 288, 521, 542
TaiI	ACGT	4 cut(s)	25, 220, 642, 658
TaqI	TCGA	4 cut(s)	57, 97, 582, 1041
TasI	AATT	5 cut(s)	106, 531, 578, 1078, 1104
Tru1I	TTAA	1 cut(s)	422
Tru9I	TTAA	1 cut(s)	422
TscAI	CASTG	2 cut(s)	524, 763
TseFI	GTSAC	1 cut(s)	754
TseI	GCWGC	5 cut(s)	35, 83, 376, 554, 907
Tsp45I	GTSAC	1 cut(s)	754
TspDTI	ATGAA	1 cut(s)	764
TspRI	CASTG	2 cut(s)	524, 763
VpaK11BI	GGWCC	1 cut(s)	1127
XapI	RAATTY	2 cut(s)	578, 1104
XceI	RCATGY	2 cut(s)	13, 1070
XcmI	CCANNNNNNNNNTGG	1 cut(s)	299
XmnI	GAANNNNTTC	1 cut(s)	127
XspI	CTAG	2 cut(s)	182, 1095

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.