Rh7AG369400
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
47598667 .. 47604703
6037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG369400.1

Sequence Viewer

Length: 1326 bp
ATGTTCTCCGCTACCAAGGCATCGCTGATTCTTCTACTCTTCGGCTTTCTTCAACTACTCGTTAAGGTCTCCGCCAACGTCGAAGGTGACGCATTGAATGCCTTGAAGAGCAGTTTGGCTGATCCTAACAATGTTCTCCAGAGTTGGGATCCTACTCTGGTCAATCCCTGCACATGGTTCCATGTCACTTGCAACTCCGAAAACAGCGTCACCAGAGTTGATCTTGGCAATGCTAATCTCTCCGGTAACCTGGTGACGCAGCTCGGAGTGCTTACCAATTTACAGTACTTGGAACTTTATAGTAATAACATAACCGGTAATATTCCAACAGAGCTTGGCGGTTTGAACAACCTGGTGAGCTTGGATCTTTACTTGAACAATTTAGATGGCGAAATTCCACCGACACTTGGCAACCTTGAAAAGCTGCGTTTCCTGCGTCTCAACAACAATACCTTGACGGGGGAAATTCCCAGAACGCTGACTAATATTGAATCATTGCAAGTCCTTTTTGCCAATAATCCTCGTCTGAATAAACTTCCAGACGTTCCATCTCCTCCTGTTTCTCCAAGCCCAAGTCCTATTTCAGGTAACAGCCGTACTGGGGCTATTGCTGGAGGGGTTGCTGCTGGTGCTGCTTTGCTGTTTGCTGCCCCTGCAATTGCACTTGCTTGGTGGCGACGAAGAAAACCACAGGATCATTTCTTTGATGTACCTGCTGAGGAGGATCCTGAAGTTCATTTAGGACAGCTCAAAAGGTTTTCTTTACGTGAGCTACAAGTTGCAACAGATACCTTTAGCAATAGACATATTCTAGGTAGAGGTGGATTTGGTAAGGTTTATAAAGGGCGTTTAGCTGATGGTTCTCTGGTGGCTGTAAAAAGACTTAAAGAGGAGAGAACCCAAGGTGGGGAGCTACAGTTCCAAACAGAAGTAGAAATGATTAGCATGGCTGTGCATCGAAATCTGCTTCGTCTGCGTGGTTTTTGCATGACACCAACAGAAAGGCTGCTCGTAAAAGGTCTGTTGAAAGATCGAAGGCTGGAAGCACTTGTCGATGCTGATTTACAGGGAAATTATATTGACGAGGAGGTAGAGCAGCTGATCCAAGTTGCTCTACTCTGCACGTCAGGCTCCCCTGGTGAAAGGCCCAAAATGTCAGAGGTTGTTAGAATGCTTGAAGGTGATGGTTTAGCTGAAAGATGGGAGGAATGGCAGAAAGAGGAGATGTTCCGTCAAGACTATAACCCTGTTCACCATCCAAGTACTAATTGGATCATCGACTCAACTTCTCATATTCCCCCCGACGAGTTGTCAGGTCCCCGATGA

Protein Analysis

441

Amino Acids

48.78

Weight (kDa)

5.52

Isoelectric Point (pI)

49.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 65 2.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 74 - 169 8.9e-12 Leucine-rich repeat region
Pkinase PF00069 266 - 356 5.2e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 269 - 371 5.6e-11 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 840
Acc36I ACCTGC 1 cut(s) 721
AciI CCGC 3 cut(s) 9, 72, 339
AclWI GGATC 9 cut(s) 116, 143, 156, 372, 702, 719, 732, 1096, 1280
AcsI RAATTY 2 cut(s) 393, 465
AcuI CTGAAG 1 cut(s) 750
AfaI GTAC 4 cut(s) 287, 598, 711, 1264
AfiI CCNNNNNNNGG 8 cut(s) 145, 174, 407, 459, 584, 601, 906, 907
AgeI ACCGGT 1 cut(s) 314
AgsI TTSAA 9 cut(s) 53, 97, 106, 346, 376, 419, 491, 1027, 1178
AhdI GACNNNNNGTC 1 cut(s) 1309
AjiI CACGTC 1 cut(s) 1125
AjnI CCWGG 3 cut(s) 249, 351, 1135
AjuI GAANNNNNNNTTGG 4 cut(s) 98, 130, 565, 597
AloI GAACNNNNNNTCC 2 cut(s) 902, 934
Alw26I GTCTC 2 cut(s) 73, 443
AlwI GGATC 9 cut(s) 116, 143, 156, 372, 702, 719, 732, 1096, 1280
AoxI GGCC 1 cut(s) 1145
ApeKI GCWGC 7 cut(s) 259, 424, 623, 632, 647, 1006, 1096
ApoI RAATTY 2 cut(s) 393, 465
ArsI GACNNNNNNTTYG 2 cut(s) 192, 224
AsiGI ACCGGT 1 cut(s) 314
AspS9I GGNCC 2 cut(s) 1146, 1316
AsuHPI GGTGA 7 cut(s) 98, 202, 265, 367, 1151, 1193, 1244
AvaII GGWCC 1 cut(s) 1316
BamHI GGATCC 2 cut(s) 148, 724
BbvCI CCTCAGC 1 cut(s) 717
BbvI GCAGC 7 cut(s) 271, 411, 610, 619, 634, 993, 1108
BccI CCATC 6 cut(s) 380, 556, 851, 1178, 1194, 1263
BceAI ACGGC 1 cut(s) 579
BciT130I CCWGG 3 cut(s) 251, 353, 1137
BcoDI GTCTC 2 cut(s) 73, 443
BfaI CTAG 1 cut(s) 812
BfmI CTRYAG 1 cut(s) 914
BfuAI ACCTGC 1 cut(s) 721
BisI GCNGC 7 cut(s) 260, 425, 624, 633, 648, 1007, 1097
BlsI GCNGC 7 cut(s) 261, 426, 625, 634, 649, 1008, 1098
BmcAI AGTACT 2 cut(s) 287, 1264
Bme1390I CCNGG 3 cut(s) 251, 353, 1137
Bme18I GGWCC 1 cut(s) 1316
BmeRI GACNNNNNGTC 1 cut(s) 1309
BmgBI CACGTC 1 cut(s) 1125
BmgT120I GGNCC 2 cut(s) 1146, 1316
BmiI GGNNCC 5 cut(s) 150, 179, 726, 1132, 1318
BmrFI CCNGG 3 cut(s) 251, 353, 1137
BmrI ACTGGG 1 cut(s) 609
BmsI GCATC 3 cut(s) 29, 964, 1045
BmuI ACTGGG 1 cut(s) 609
BpmI CTGGAG 2 cut(s) 122, 633
Bpu10I CCTNAGC 1 cut(s) 717
BsaAI YACGTR 1 cut(s) 767
BsaI GGTCTC 1 cut(s) 73
BsaJI CCNNGG 3 cut(s) 15, 901, 1135
BsaWI WCCGGW 2 cut(s) 242, 314
BsaXI ACNNNNNCTCC 2 cut(s) 902, 932
Bsc4I CCNNNNNNNGG 8 cut(s) 145, 174, 407, 459, 584, 601, 906, 907
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 1 cut(s) 604
Bse3DI GCAATG 2 cut(s) 235, 494
BseBI CCWGG 3 cut(s) 251, 353, 1137
BseDI CCNNGG 3 cut(s) 15, 901, 1135
BseGI GGATG 1 cut(s) 1255
BseLI CCNNNNNNNGG 8 cut(s) 145, 174, 407, 459, 584, 601, 906, 907
BseMI GCAATG 2 cut(s) 235, 494
BseMII CTCAG 1 cut(s) 708
BseNI ACTGG 1 cut(s) 604
BseRI GAGGAG 5 cut(s) 543, 734, 905, 1100, 1235
BseXI GCAGC 7 cut(s) 271, 411, 610, 619, 634, 993, 1108
BsgI GTGCAG 2 cut(s) 154, 1105
BshFI GGCC 1 cut(s) 1147
BshTI ACCGGT 1 cut(s) 314
BsiSI CCGG 2 cut(s) 243, 315
BslFI GGGAC 1 cut(s) 1302
BslI CCNNNNNNNGG 8 cut(s) 145, 174, 407, 459, 584, 601, 906, 907
BsmAI GTCTC 2 cut(s) 73, 443
BsmBI CGTCTC 1 cut(s) 443
BsmFI GGGAC 1 cut(s) 1302
BsmI GAATGC 2 cut(s) 103, 1176
BsnI GGCC 1 cut(s) 1147
Bso31I GGTCTC 1 cut(s) 73
Bsp143I GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
BspACI CCGC 3 cut(s) 9, 72, 339
BspANI GGCC 1 cut(s) 1147
BspCNI CTCAG 1 cut(s) 709
BspLI GGNNCC 5 cut(s) 150, 179, 726, 1132, 1318
BspMI ACCTGC 1 cut(s) 721
BspPI GGATC 9 cut(s) 116, 143, 156, 372, 702, 719, 732, 1096, 1280
BspQI GCTCTTC 1 cut(s) 101
BspTNI GGTCTC 1 cut(s) 73
BsrDI GCAATG 2 cut(s) 235, 494
BsrFI RCCGGY 1 cut(s) 314
BsrI ACTGG 1 cut(s) 604
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 3 cut(s) 15, 901, 1135
BssMI GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
BssT1I CCWWGG 2 cut(s) 15, 901
Bst2UI CCWGG 3 cut(s) 251, 353, 1137
Bst4CI ACNGT 2 cut(s) 285, 918
Bst6I CTCTTC 2 cut(s) 44, 101
BstAPI GCANNNNNTGC 1 cut(s) 98
BstBAI YACGTR 1 cut(s) 767
BstDEI CTNAG 1 cut(s) 717
BstEII GGTNACC 1 cut(s) 245
BstENI CCTNNNNNAGG 1 cut(s) 582
BstF5I GGATG 1 cut(s) 1255
BstKTI GATC 9 cut(s) 124, 151, 223, 367, 697, 727, 1033, 1104, 1275
BstMAI GTCTC 2 cut(s) 73, 443
BstMBI GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
BstMWI GCNNNNNNNGC 9 cut(s) 17, 98, 268, 433, 629, 632, 653, 973, 1128
BstNI CCWGG 3 cut(s) 251, 353, 1137
BstPI GGTNACC 1 cut(s) 245
BstSCI CCNGG 3 cut(s) 249, 351, 1135
BstSFI CTRYAG 1 cut(s) 914
BstV1I GCAGC 7 cut(s) 271, 411, 610, 619, 634, 993, 1108
BstX2I RGATCY 3 cut(s) 148, 364, 724
BstYI RGATCY 3 cut(s) 148, 364, 724
BsuRI GGCC 1 cut(s) 1147
BtgZI GCGATG 1 cut(s) 6
BtrI CACGTC 1 cut(s) 1125
BtsCI GGATG 1 cut(s) 1255
BveI ACCTGC 1 cut(s) 721
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 2 cut(s) 1146, 1316
CseI GACGC 4 cut(s) 98, 196, 265, 425
CsiI ACCWGGT 2 cut(s) 249, 351
Csp6I GTAC 4 cut(s) 286, 597, 710, 1263
CspAI ACCGGT 1 cut(s) 314
CviAII CATG 4 cut(s) 174, 182, 946, 988
CviQI GTAC 4 cut(s) 286, 597, 710, 1263
DdeI CTNAG 1 cut(s) 717
DpnI GATC 9 cut(s) 123, 150, 222, 366, 696, 726, 1032, 1103, 1274
DpnII GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
DriI GACNNNNNGTC 1 cut(s) 1309
Eam1104I CTCTTC 2 cut(s) 44, 101
Eam1105I GACNNNNNGTC 1 cut(s) 1309
EarI CTCTTC 2 cut(s) 44, 101
EciI GGCGGA 1 cut(s) 61
Eco130I CCWWGG 2 cut(s) 15, 901
Eco31I GGTCTC 1 cut(s) 73
Eco47I GGWCC 1 cut(s) 1316
Eco57I CTGAAG 1 cut(s) 750
Eco91I GGTNACC 1 cut(s) 245
EcoNI CCTNNNNNAGG 1 cut(s) 582
EcoO109I RGGNCCY 1 cut(s) 1316
EcoO65I GGTNACC 1 cut(s) 245
EcoRII CCWGG 3 cut(s) 249, 351, 1135
EcoT14I CCWWGG 2 cut(s) 15, 901
ErhI CCWWGG 2 cut(s) 15, 901
Esp3I CGTCTC 1 cut(s) 443
FaeI CATG 4 cut(s) 177, 185, 949, 991
FalI AAGNNNNNCTT 2 cut(s) 745, 777
FaqI GGGAC 1 cut(s) 1302
FatI CATG 4 cut(s) 173, 181, 945, 987
Fnu4HI GCNGC 7 cut(s) 260, 425, 624, 633, 648, 1007, 1097
FokI GGATG 1 cut(s) 1242
Fsp4HI GCNGC 7 cut(s) 260, 425, 624, 633, 648, 1007, 1097
FspBI CTAG 1 cut(s) 812
GluI GCNGC 7 cut(s) 260, 425, 624, 633, 648, 1007, 1097
GsuI CTGGAG 2 cut(s) 122, 633
HaeIII GGCC 1 cut(s) 1147
HapII CCGG 2 cut(s) 243, 315
HgaI GACGC 4 cut(s) 98, 196, 265, 425
Hin1II CATG 4 cut(s) 177, 185, 949, 991
HinfI GANTC 3 cut(s) 28, 491, 1280
HpaII CCGG 2 cut(s) 243, 315
HphI GGTGA 7 cut(s) 98, 202, 265, 367, 1151, 1193, 1244
Hpy166II GTNNAC 1 cut(s) 1252
Hpy188I TCNGA 4 cut(s) 199, 266, 528, 1159
Hpy188III TCNNGA 4 cut(s) 139, 539, 728, 1235
Hpy8I GTNNAC 1 cut(s) 1252
Hpy99I CGWCG 3 cut(s) 83, 681, 1307
HpyAV CCTTC 3 cut(s) 77, 1029, 1172
HpyCH4III ACNGT 2 cut(s) 285, 918
HpyCH4IV ACGT 4 cut(s) 78, 543, 766, 1124
HpyCH4V TGCA 9 cut(s) 171, 192, 499, 656, 662, 782, 955, 987, 1122
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 98, 268, 433, 629, 632, 653, 973, 1128
HpyF3I CTNAG 1 cut(s) 717
HpySE526I ACGT 4 cut(s) 78, 543, 766, 1124
Hsp92II CATG 4 cut(s) 177, 185, 949, 991
Kzo9I GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
LguI GCTCTTC 1 cut(s) 101
LmnI GCTCC 2 cut(s) 910, 1136
Lsp1109I GCAGC 7 cut(s) 271, 411, 610, 619, 634, 993, 1108
LweI GCATC 3 cut(s) 29, 964, 1045
MabI ACCWGGT 2 cut(s) 249, 351
MaeI CTAG 1 cut(s) 812
MaeII ACGT 4 cut(s) 78, 543, 766, 1124
MaeIII GTNAC 6 cut(s) 86, 184, 208, 245, 253, 587
MalI GATC 9 cut(s) 123, 150, 222, 366, 696, 726, 1032, 1103, 1274
MboI GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
MboII GAAGA 5 cut(s) 23, 31, 41, 118, 693
MfeI CAATTG 1 cut(s) 657
MflI RGATCY 3 cut(s) 148, 364, 724
MluCI AATT 7 cut(s) 277, 379, 393, 465, 657, 1072, 1267
MlyI GAGTC 1 cut(s) 1274
MmeI TCCRAC 1 cut(s) 350
MseI TTAA 2 cut(s) 63, 885
MslI CAYNNNNRTG 1 cut(s) 950
MspA1I CMGCKG 1 cut(s) 1099
MspI CCGG 2 cut(s) 243, 315
MspR9I CCNGG 3 cut(s) 251, 353, 1137
MunI CAATTG 1 cut(s) 657
Mva1269I GAATGC 2 cut(s) 103, 1176
MvaI CCWGG 3 cut(s) 251, 353, 1137
MwoI GCNNNNNNNGC 9 cut(s) 17, 98, 268, 433, 629, 632, 653, 973, 1128
NdeII GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
NlaIII CATG 4 cut(s) 177, 185, 949, 991
NlaIV GGNNCC 5 cut(s) 150, 179, 726, 1132, 1318
NmuCI GTSAC 4 cut(s) 86, 184, 208, 253
PciSI GCTCTTC 1 cut(s) 101
PctI GAATGC 2 cut(s) 103, 1176
PfeI GAWTC 2 cut(s) 28, 491
PinAI ACCGGT 1 cut(s) 314
PkrI GCNGC 7 cut(s) 261, 426, 625, 634, 649, 1008, 1098
PleI GAGTC 1 cut(s) 1274
PpsI GAGTC 1 cut(s) 1274
Ppu21I YACGTR 1 cut(s) 767
PpuMI RGGWCCY 1 cut(s) 1316
PsiI TTATAA 1 cut(s) 840
Psp5II RGGWCCY 1 cut(s) 1316
Psp6I CCWGG 3 cut(s) 249, 351, 1135
PspEI GGTNACC 1 cut(s) 245
PspGI CCWGG 3 cut(s) 249, 351, 1135
PspN4I GGNNCC 5 cut(s) 150, 179, 726, 1132, 1318
PspPI GGNCC 2 cut(s) 1146, 1316
PspPPI RGGWCCY 1 cut(s) 1316
PsuI RGATCY 3 cut(s) 148, 364, 724
PvuII CAGCTG 1 cut(s) 1099
RsaI GTAC 4 cut(s) 287, 598, 711, 1264
RsaNI GTAC 4 cut(s) 286, 597, 710, 1263
RseI CAYNNNNRTG 1 cut(s) 950
SapI GCTCTTC 1 cut(s) 101
SaqAI TTAA 2 cut(s) 63, 885
SatI GCNGC 7 cut(s) 260, 425, 624, 633, 648, 1007, 1097
Sau3AI GATC 9 cut(s) 121, 148, 220, 364, 694, 724, 1030, 1101, 1272
Sau96I GGNCC 2 cut(s) 1146, 1316
ScaI AGTACT 2 cut(s) 287, 1264
SchI GAGTC 1 cut(s) 1274
ScrFI CCNGG 3 cut(s) 251, 353, 1137
SexAI ACCWGGT 2 cut(s) 249, 351
SfaNI GCATC 3 cut(s) 29, 964, 1045
SfcI CTRYAG 1 cut(s) 914
SinI GGWCC 1 cut(s) 1316
SmiMI CAYNNNNRTG 1 cut(s) 950
Sse9I AATT 7 cut(s) 277, 379, 393, 465, 657, 1072, 1267
SsiI CCGC 3 cut(s) 9, 72, 339
SspI AATATT 2 cut(s) 322, 487
SspMI CTAG 1 cut(s) 812
StyD4I CCNGG 3 cut(s) 249, 351, 1135
StyI CCWWGG 2 cut(s) 15, 901
TaaI ACNGT 2 cut(s) 285, 918
TaiI ACGT 4 cut(s) 81, 546, 769, 1127
TaqI TCGA 5 cut(s) 81, 958, 1033, 1053, 1278
TasI AATT 7 cut(s) 277, 379, 393, 465, 657, 1072, 1267
TatI WGTACW 2 cut(s) 285, 1262
TfiI GAWTC 2 cut(s) 28, 491
Tru1I TTAA 2 cut(s) 63, 885
Tru9I TTAA 2 cut(s) 63, 885
TseFI GTSAC 4 cut(s) 86, 184, 208, 253
TseI GCWGC 7 cut(s) 259, 424, 623, 632, 647, 1006, 1096
Tsp45I GTSAC 4 cut(s) 86, 184, 208, 253
TspDTI ATGAA 1 cut(s) 725
TspGWI ACGGA 1 cut(s) 1220
VpaK11BI GGWCC 1 cut(s) 1316
XagI CCTNNNNNAGG 1 cut(s) 582
XapI RAATTY 2 cut(s) 393, 465
XcmI CCANNNNNNNNNTGG 1 cut(s) 1266
XspI CTAG 1 cut(s) 812
ZrmI AGTACT 2 cut(s) 287, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.