MD15G1414000.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
51329678 .. 51333046
3369 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1414000.v1.1.491

Sequence Viewer

Length: 1197 bp
ATGTATCTGGAAACTATGGGTGGCACTGGTACTGGGGCTATTTTTGGAGGGGTTGCCGTTGGTGTTGCTTTGCTGTTTGGTGCACTTGCAATTGCATTTGCTTATTGTCGACGAAGAAAACCACAGGATCATTTCTTTAATGAACCTGCTGAGGAGGATCCAGAAGTTCATTTACGACAGCTCAAAAGGTTTTCTTTACGCGAGCTACAAGTTGCGACGGATACCTTTAGCGACAAAAATATTCTTGGTAGAGGTGGATTTGGTAAGGTTTATAAAGGATGCTTAGCTGATGGAACTCTGGTTGCTGTAAAAAGACTAAAAGAGAAGAGAACCCAAGGCGGGGAGCTACAGTTCCAAACGGAAGTTAAAATGATTAGCATGGCTGTCCACCGCAATCTGCTTCGTCTGCATGGTTTTTGCATGACACCAACAGAAAGGCTGCTTGTATATCCTTATATGGCTAATGGAAGTGTGGCATCACGTTTAATAGATCGTCCAGAAGGACAACCTGCACTTAATTGGCCAGTAAGACAACGCATTGCATTGGGATCTGCAAGAGGCCTTGCTTATTTACATGACCACTGTGATCCAAAAATTATTCACCGTGATGTGAAAGCTGCAAACATATTGTTGGATGAGGAATTCGAAGCAGTTGTTGGAGACTTTGGGTTGGCTAAACTCATGAACTACAAGGATACACATATTACCACAGCTGTACGTGGCACAATTGGTCATATAGCACCAGAGTACTTTTCAAATGGAAGGTTTTCCGAGAAAACTGATGTTTTTGGATACGGAGTCATGCTTCTTGAACTCATCACTGGTCAGAGGGCTTTTGATCCTCAGCCTGAGAGTGATGATGACGTCACGTTACTTGATTGGGTCAAAGGACTAATGAAAGATCAGAGGGTGGAAATACTTGTTGATGCTGATCTAAATGGAAATTATATTGACGATCAAGTGGAGCAGCTGACCCAAGTAGCTCTACTATGCACACAAGACTCCCCAGGGGAACGGCCCAAGATGTCAGAGGTTGTCCAGATGCTGGAAGGCGATGGTTTGGCTGAAAGATGGGAAGAGTGGCAGAACGAGATGTTCCGCCAAGATTTCAACCCTATTCATCACCAAAGTACTAATTGGATCATAGTAGACTCAACTTCTCATATTCCTCCGGATGAGTTGTCCGGTCCCAGATGA

Protein Analysis

399

Amino Acids

44.69

Weight (kDa)

5.44

Isoelectric Point (pI)

43.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 77 - 347 1.9e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 80 - 349 2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 273
AatII GACGTC 1 cut(s) 867
Acc36I ACCTGC 2 cut(s) 154, 517
AccB7I CCANNNNNTGG 1 cut(s) 1045
AccI GTMKAC 2 cut(s) 109, 1149
AccII CGCG 1 cut(s) 201
AccIII TCCGGA 1 cut(s) 1171
AciI CCGC 3 cut(s) 339, 391, 1099
AclWI GGATC 7 cut(s) 135, 152, 165, 556, 581, 833, 1148
AcoI YGGCCR 1 cut(s) 521
AcsI RAATTY 1 cut(s) 641
AcyI GRCGYC 1 cut(s) 864
AfaI GTAC 4 cut(s) 31, 717, 749, 1132
AfiI CCNNNNNNNGG 3 cut(s) 339, 340, 1045
AgsI TTSAA 3 cut(s) 756, 812, 1111
AjnI CCWGG 1 cut(s) 1006
AjuI GAANNNNNNNTTGG 2 cut(s) 639, 671
AloI GAACNNNNNNTCC 2 cut(s) 335, 367
AluBI AGCT 8 cut(s) 181, 205, 287, 346, 617, 713, 970, 983
AluI AGCT 8 cut(s) 181, 205, 287, 346, 617, 713, 970, 983
Alw21I GWGCWC 1 cut(s) 85
Alw26I GTCTC 1 cut(s) 654
Alw44I GTGCAC 1 cut(s) 81
AlwI GGATC 7 cut(s) 135, 152, 165, 556, 581, 833, 1148
AlwNI CAGNNNCTG 1 cut(s) 1045
Aor13HI TCCGGA 1 cut(s) 1171
AoxI GGCC 3 cut(s) 521, 559, 1016
ApaLI GTGCAC 1 cut(s) 81
ApeKI GCWGC 3 cut(s) 439, 617, 967
ApoI RAATTY 1 cut(s) 641
Asp700I GAANNNNTTC 1 cut(s) 766
AspS9I GGNCC 2 cut(s) 1017, 1187
AsuHPI GGTGA 2 cut(s) 593, 1115
AsuII TTCGAA 1 cut(s) 645
AvaII GGWCC 1 cut(s) 1187
BaeGI GKGCMC 1 cut(s) 85
BalI TGGCCA 1 cut(s) 523
BamHI GGATCC 1 cut(s) 157
BarI GAAGNNNNNNTAC 2 cut(s) 156, 188
Bbv12I GWGCWC 1 cut(s) 85
BbvCI CCTCAGC 2 cut(s) 150, 843
BbvI GCAGC 3 cut(s) 426, 604, 979
BccI CCATC 3 cut(s) 284, 1049, 1065
BceAI ACGGC 2 cut(s) 41, 1031
BciT130I CCWGG 1 cut(s) 1008
BciVI GTATCC 3 cut(s) 214, 688, 785
BcoDI GTCTC 1 cut(s) 654
BfmI CTRYAG 1 cut(s) 347
BfuAI ACCTGC 2 cut(s) 154, 517
BfuI GTATCC 3 cut(s) 214, 688, 785
BisI GCNGC 3 cut(s) 440, 618, 968
BlpI GCTNAGC 1 cut(s) 283
BlsI GCNGC 3 cut(s) 441, 619, 969
BmcAI AGTACT 2 cut(s) 749, 1132
Bme1390I CCNGG 1 cut(s) 1008
Bme18I GGWCC 1 cut(s) 1187
BmgT120I GGNCC 2 cut(s) 1017, 1187
BmiI GGNNCC 2 cut(s) 159, 1189
BmrFI CCNGG 1 cut(s) 1008
BmrI ACTGGG 1 cut(s) 42
BmsI GCATC 4 cut(s) 269, 485, 916, 1032
BmuI ACTGGG 1 cut(s) 42
Bpu10I CCTNAGC 2 cut(s) 150, 843
Bpu1102I GCTNAGC 1 cut(s) 283
Bpu14I TTCGAA 1 cut(s) 645
BsaAI YACGTR 1 cut(s) 719
BsaBI GATNNNNATC 1 cut(s) 930
BsaHI GRCGYC 1 cut(s) 864
BsaJI CCNNGG 3 cut(s) 334, 1006, 1007
BsaWI WCCGGW 2 cut(s) 1171, 1184
BsaXI ACNNNNNCTCC 2 cut(s) 335, 365
Bsc4I CCNNNNNNNGG 3 cut(s) 339, 340, 1045
Bse1I ACTGG 4 cut(s) 31, 37, 524, 826
Bse3DI GCAATG 1 cut(s) 537
Bse8I GATNNNNATC 1 cut(s) 930
BseAI TCCGGA 1 cut(s) 1171
BseBI CCWGG 1 cut(s) 1008
BseDI CCNNGG 3 cut(s) 334, 1006, 1007
BseGI GGATG 3 cut(s) 284, 640, 1180
BseJI GATNNNNATC 1 cut(s) 930
BseLI CCNNNNNNNGG 3 cut(s) 339, 340, 1045
BseMI GCAATG 1 cut(s) 537
BseMII CTCAG 3 cut(s) 141, 840, 857
BseNI ACTGG 4 cut(s) 31, 37, 524, 826
BseRI GAGGAG 1 cut(s) 167
BseSI GKGCMC 1 cut(s) 85
BseXI GCAGC 3 cut(s) 426, 604, 979
BsgI GTGCAG 1 cut(s) 495
Bsh1236I CGCG 1 cut(s) 201
BshFI GGCC 3 cut(s) 523, 561, 1018
BsiHKAI GWGCWC 1 cut(s) 85
BsiSI CCGG 2 cut(s) 1172, 1185
BslFI GGGAC 1 cut(s) 1173
BslI CCNNNNNNNGG 3 cut(s) 339, 340, 1045
BsmAI GTCTC 1 cut(s) 654
BsmFI GGGAC 1 cut(s) 1173
BsnI GGCC 3 cut(s) 523, 561, 1018
Bsp119I TTCGAA 1 cut(s) 645
Bsp1286I GDGCHC 1 cut(s) 85
Bsp13I TCCGGA 1 cut(s) 1171
Bsp1720I GCTNAGC 1 cut(s) 283
BspACI CCGC 3 cut(s) 339, 391, 1099
BspANI GGCC 3 cut(s) 523, 561, 1018
BspCNI CTCAG 3 cut(s) 142, 841, 856
BspEI TCCGGA 1 cut(s) 1171
BspFNI CGCG 1 cut(s) 201
BspHI TCATGA 1 cut(s) 681
BspLI GGNNCC 2 cut(s) 159, 1189
BspMI ACCTGC 2 cut(s) 154, 517
BspPI GGATC 7 cut(s) 135, 152, 165, 556, 581, 833, 1148
BspT104I TTCGAA 1 cut(s) 645
BsrDI GCAATG 1 cut(s) 537
BsrI ACTGG 4 cut(s) 31, 37, 524, 826
BssECI CCNNGG 3 cut(s) 334, 1006, 1007
BssNI GRCGYC 1 cut(s) 864
BssT1I CCWWGG 1 cut(s) 334
Bst2UI CCWGG 1 cut(s) 1008
Bst4CI ACNGT 3 cut(s) 351, 584, 605
Bst6I CTCTTC 2 cut(s) 320, 1071
BstACI GRCGYC 1 cut(s) 864
BstBAI YACGTR 1 cut(s) 719
BstBI TTCGAA 1 cut(s) 645
BstC8I GCNNGC 1 cut(s) 203
BstDEI CTNAG 4 cut(s) 150, 283, 843, 849
BstF5I GGATG 3 cut(s) 284, 640, 1180
BstFNI CGCG 1 cut(s) 201
BstMAI GTCTC 1 cut(s) 654
BstMWI GCNNNNNNNGC 1 cut(s) 406
BstNI CCWGG 1 cut(s) 1008
BstSCI CCNGG 1 cut(s) 1006
BstSFI CTRYAG 1 cut(s) 347
BstSLI GKGCMC 1 cut(s) 85
BstUI CGCG 1 cut(s) 201
BstV1I GCAGC 3 cut(s) 426, 604, 979
BstX2I RGATCY 2 cut(s) 157, 548
BstYI RGATCY 2 cut(s) 157, 548
BsuI GTATCC 3 cut(s) 214, 688, 785
BsuRI GGCC 3 cut(s) 523, 561, 1018
BtgZI GCGATG 1 cut(s) 1068
BtsCI GGATG 3 cut(s) 284, 640, 1180
BtsIMutI CAGTG 3 cut(s) 24, 580, 819
BveI ACCTGC 2 cut(s) 154, 517
Cac8I GCNNGC 1 cut(s) 203
CaiI CAGNNNCTG 1 cut(s) 1045
CciI TCATGA 1 cut(s) 681
Cfr13I GGNCC 2 cut(s) 1017, 1187
Csp6I GTAC 4 cut(s) 30, 716, 748, 1131
CviAII CATG 6 cut(s) 379, 410, 421, 575, 682, 802
CviQI GTAC 4 cut(s) 30, 716, 748, 1131
DdeI CTNAG 4 cut(s) 150, 283, 843, 849
EaeI YGGCCR 1 cut(s) 521
Eam1104I CTCTTC 2 cut(s) 320, 1071
EarI CTCTTC 2 cut(s) 320, 1071
EciI GGCGGA 1 cut(s) 1088
Eco130I CCWWGG 1 cut(s) 334
Eco147I AGGCCT 1 cut(s) 561
Eco47I GGWCC 1 cut(s) 1187
EcoRI GAATTC 1 cut(s) 641
EcoRII CCWGG 1 cut(s) 1006
EcoT14I CCWWGG 1 cut(s) 334
ErhI CCWWGG 1 cut(s) 334
FaeI CATG 6 cut(s) 382, 413, 424, 578, 685, 805
FalI AAGNNNNNCTT 2 cut(s) 178, 210
FaqI GGGAC 1 cut(s) 1173
FatI CATG 6 cut(s) 378, 409, 420, 574, 681, 801
FauI CCCGC 1 cut(s) 332
FblI GTMKAC 2 cut(s) 109, 1149
Fnu4HI GCNGC 3 cut(s) 440, 618, 968
FokI GGATG 3 cut(s) 291, 647, 1187
Fsp4HI GCNGC 3 cut(s) 440, 618, 968
GluI GCNGC 3 cut(s) 440, 618, 968
HaeIII GGCC 3 cut(s) 523, 561, 1018
HapII CCGG 2 cut(s) 1172, 1185
Hin1I GRCGYC 1 cut(s) 864
Hin1II CATG 6 cut(s) 382, 413, 424, 578, 685, 805
HincII GTYRAC 1 cut(s) 110
HindII GTYRAC 1 cut(s) 110
HinfI GANTC 3 cut(s) 798, 1001, 1151
HpaII CCGG 2 cut(s) 1172, 1185
HphI GGTGA 2 cut(s) 593, 1115
Hpy166II GTNNAC 4 cut(s) 83, 110, 388, 1150
Hpy188I TCNGA 4 cut(s) 772, 828, 906, 1030
Hpy188III TCNNGA 7 cut(s) 8, 161, 497, 682, 809, 1039, 1172
Hpy8I GTNNAC 4 cut(s) 83, 110, 388, 1150
Hpy99I CGWCG 2 cut(s) 114, 220
HpyAV CCTTC 3 cut(s) 494, 756, 1043
HpyCH4III ACNGT 3 cut(s) 351, 584, 605
HpyCH4IV ACGT 4 cut(s) 481, 718, 864, 869
HpyF10VI GCNNNNNNNGC 1 cut(s) 406
HpyF3I CTNAG 4 cut(s) 150, 283, 843, 849
HpySE526I ACGT 4 cut(s) 481, 718, 864, 869
Hsp92I GRCGYC 1 cut(s) 864
Hsp92II CATG 6 cut(s) 382, 413, 424, 578, 685, 805
Kpn2I TCCGGA 1 cut(s) 1171
LmnI GCTCC 2 cut(s) 343, 964
Lsp1109I GCAGC 3 cut(s) 426, 604, 979
LweI GCATC 4 cut(s) 269, 485, 916, 1032
MaeII ACGT 4 cut(s) 481, 718, 864, 869
MaeIII GTNAC 2 cut(s) 865, 870
MboII GAAGA 3 cut(s) 126, 337, 1088
MfeI CAATTG 2 cut(s) 90, 726
MflI RGATCY 2 cut(s) 157, 548
MhlI GDGCHC 1 cut(s) 85
MlsI TGGCCA 1 cut(s) 523
MluCI AATT 7 cut(s) 90, 517, 594, 641, 726, 943, 1135
MluNI TGGCCA 1 cut(s) 523
MlyI GAGTC 3 cut(s) 807, 995, 1145
MmeI TCCRAC 2 cut(s) 612, 637
Mox20I TGGCCA 1 cut(s) 523
MroI TCCGGA 1 cut(s) 1171
MroXI GAANNNNTTC 1 cut(s) 766
MscI TGGCCA 1 cut(s) 523
MseI TTAA 4 cut(s) 138, 366, 485, 516
MslI CAYNNNNRTG 1 cut(s) 606
Msp20I TGGCCA 1 cut(s) 523
MspA1I CMGCKG 2 cut(s) 713, 970
MspI CCGG 2 cut(s) 1172, 1185
MspR9I CCNGG 1 cut(s) 1008
MunI CAATTG 2 cut(s) 90, 726
MvaI CCWGG 1 cut(s) 1008
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 1 cut(s) 406
NlaIII CATG 6 cut(s) 382, 413, 424, 578, 685, 805
NlaIV GGNNCC 2 cut(s) 159, 1189
NmuCI GTSAC 1 cut(s) 865
NspV TTCGAA 1 cut(s) 645
PagI TCATGA 1 cut(s) 681
PasI CCCWGGG 1 cut(s) 1007
PceI AGGCCT 1 cut(s) 561
PdmI GAANNNNTTC 1 cut(s) 766
PflMI CCANNNNNTGG 1 cut(s) 1045
PkrI GCNGC 3 cut(s) 441, 619, 969
PleI GAGTC 3 cut(s) 806, 995, 1145
PpsI GAGTC 3 cut(s) 806, 995, 1145
Ppu21I YACGTR 1 cut(s) 719
PsiI TTATAA 1 cut(s) 273
Psp6I CCWGG 1 cut(s) 1006
PspGI CCWGG 1 cut(s) 1006
PspN4I GGNNCC 2 cut(s) 159, 1189
PspPI GGNCC 2 cut(s) 1017, 1187
PstNI CAGNNNCTG 1 cut(s) 1045
PsuI RGATCY 2 cut(s) 157, 548
PvuII CAGCTG 2 cut(s) 713, 970
RsaI GTAC 4 cut(s) 31, 717, 749, 1132
RsaNI GTAC 4 cut(s) 30, 716, 748, 1131
RseI CAYNNNNRTG 1 cut(s) 606
SalI GTCGAC 1 cut(s) 108
SaqAI TTAA 4 cut(s) 138, 366, 485, 516
SatI GCNGC 3 cut(s) 440, 618, 968
Sau96I GGNCC 2 cut(s) 1017, 1187
ScaI AGTACT 2 cut(s) 749, 1132
SchI GAGTC 3 cut(s) 807, 995, 1145
ScrFI CCNGG 1 cut(s) 1008
SduI GDGCHC 1 cut(s) 85
SfaNI GCATC 4 cut(s) 269, 485, 916, 1032
SfcI CTRYAG 1 cut(s) 347
SfuI TTCGAA 1 cut(s) 645
SinI GGWCC 1 cut(s) 1187
SmiMI CAYNNNNRTG 1 cut(s) 606
Sse9I AATT 7 cut(s) 90, 517, 594, 641, 726, 943, 1135
SseBI AGGCCT 1 cut(s) 561
SsiI CCGC 3 cut(s) 339, 391, 1099
SspI AATATT 1 cut(s) 241
StuI AGGCCT 1 cut(s) 561
StyD4I CCNGG 1 cut(s) 1006
StyI CCWWGG 1 cut(s) 334
TaaI ACNGT 3 cut(s) 351, 584, 605
TaiI ACGT 4 cut(s) 484, 721, 867, 872
TaqI TCGA 2 cut(s) 109, 645
TasI AATT 7 cut(s) 90, 517, 594, 641, 726, 943, 1135
TatI WGTACW 2 cut(s) 747, 1130
Tru1I TTAA 4 cut(s) 138, 366, 485, 516
Tru9I TTAA 4 cut(s) 138, 366, 485, 516
TscAI CASTG 3 cut(s) 31, 587, 826
TseFI GTSAC 1 cut(s) 865
TseI GCWGC 3 cut(s) 439, 617, 967
Tsp45I GTSAC 1 cut(s) 865
TspDTI ATGAA 5 cut(s) 156, 158, 698, 911, 1109
TspGWI ACGGA 3 cut(s) 233, 374, 810
TspRI CASTG 3 cut(s) 31, 587, 826
Van91I CCANNNNNTGG 1 cut(s) 1045
VneI GTGCAC 1 cut(s) 81
VpaK11BI GGWCC 1 cut(s) 1187
XapI RAATTY 1 cut(s) 641
XmiI GTMKAC 2 cut(s) 109, 1149
XmnI GAANNNNTTC 1 cut(s) 766
ZraI GACGTC 1 cut(s) 865
ZrmI AGTACT 2 cut(s) 749, 1132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.