BEST Arabidopsis thaliana protein match is hydroxyproline-rich glycoprotein family protein (TAIR AT3G56590.2)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10790 |
| fragaria_vesca | FvH4_5g29560 FvH4_5g29560 |
| malus_domestica | MD08G1228500.v1.1 MD08G1228600.v1.1 MD15G1422400.v1.1 MD15G1422500.v1.1 |
| prunus_persica | Prupe.1G567800_v2.0.a1 |
| pyrus_communis | pycom08g19900 pycom08g19910 pycom15g37430 pycom15g37440 |
| rosa_chinensis | RchiOBHm_Chr7g0222521 |
| rosa_laevigata | RLG00000002048 |
| rosa_multiflora | Rmu_ssc0000146.1_g000026 Rmu_ssc0000385.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00236690 |
| rosa_rugosa | Rorug07G0210200 |
| rosa_samantha | Rh7AG351900 Rh7BG342500 Rh7CG369300 Rh7DG348600 |
| rosa_wichuraiana | Rw7G029710 Rw7G030030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 99 |
| Acc36I | ACCTGC | 1 cut(s) | 1306 |
| Acc65I | GGTACC | 1 cut(s) | 1294 |
| AccB1I | GGYRCC | 1 cut(s) | 1294 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1325 |
| AciI | CCGC | 1 cut(s) | 61 |
| AclWI | GGATC | 6 cut(s) | 163, 202, 206, 215, 443, 464 |
| AcsI | RAATTY | 4 cut(s) | 82, 694, 1335, 1583 |
| AcuI | CTGAAG | 3 cut(s) | 133, 271, 810 |
| AcvI | CACGTG | 1 cut(s) | 1453 |
| AfaI | GTAC | 4 cut(s) | 1047, 1198, 1296, 1593 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 805, 1055, 1193, 1325 |
| AflII | CTTAAG | 2 cut(s) | 481, 518 |
| AflIII | ACRYGT | 1 cut(s) | 1450 |
| AgsI | TTSAA | 8 cut(s) | 627, 721, 786, 859, 872, 978, 1518, 1582 |
| AjnI | CCWGG | 4 cut(s) | 367, 589, 1054, 1192 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 885, 917 |
| Alw21I | GWGCWC | 3 cut(s) | 442, 970, 1510 |
| Alw26I | GTCTC | 2 cut(s) | 1351, 1440 |
| Alw44I | GTGCAC | 2 cut(s) | 966, 1506 |
| AlwI | GGATC | 6 cut(s) | 163, 202, 206, 215, 443, 464 |
| AoxI | GGCC | 2 cut(s) | 740, 904 |
| ApaLI | GTGCAC | 2 cut(s) | 966, 1506 |
| ApeKI | GCWGC | 4 cut(s) | 31, 58, 559, 1460 |
| ApoI | RAATTY | 4 cut(s) | 82, 694, 1335, 1583 |
| Asp718I | GGTACC | 1 cut(s) | 1294 |
| AspLEI | GCGC | 1 cut(s) | 847 |
| AspS9I | GGNCC | 2 cut(s) | 310, 495 |
| AsuC2I | CCSGG | 1 cut(s) | 1491 |
| AvaII | GGWCC | 2 cut(s) | 310, 495 |
| BaeGI | GKGCMC | 2 cut(s) | 970, 1510 |
| BamHI | GGATCC | 1 cut(s) | 207 |
| BanI | GGYRCC | 1 cut(s) | 1294 |
| BauI | CACGAG | 2 cut(s) | 821, 888 |
| BbrPI | CACGTG | 1 cut(s) | 1453 |
| BbsI | GAAGAC | 1 cut(s) | 1533 |
| Bbv12I | GWGCWC | 3 cut(s) | 442, 970, 1510 |
| BbvCI | CCTCAGC | 1 cut(s) | 173 |
| BbvI | GCAGC | 4 cut(s) | 43, 70, 571, 1447 |
| BccI | CCATC | 5 cut(s) | 571, 1012, 1024, 1074, 1534 |
| BciT130I | CCWGG | 4 cut(s) | 369, 591, 1056, 1194 |
| BclI | TGATCA | 1 cut(s) | 415 |
| BcnI | CCSGG | 1 cut(s) | 1491 |
| BcoDI | GTCTC | 2 cut(s) | 1351, 1440 |
| BfaI | CTAG | 1 cut(s) | 1332 |
| BfmI | CTRYAG | 3 cut(s) | 23, 270, 1467 |
| BfrI | CTTAAG | 2 cut(s) | 481, 518 |
| BfuAI | ACCTGC | 1 cut(s) | 1306 |
| BglII | AGATCT | 1 cut(s) | 1569 |
| BisI | GCNGC | 5 cut(s) | 32, 59, 62, 560, 1461 |
| BlpI | GCTNAGC | 1 cut(s) | 143 |
| BlsI | GCNGC | 5 cut(s) | 33, 60, 63, 561, 1462 |
| Bme1390I | CCNGG | 5 cut(s) | 369, 591, 1056, 1194, 1491 |
| Bme18I | GGWCC | 2 cut(s) | 310, 495 |
| BmgT120I | GGNCC | 2 cut(s) | 310, 495 |
| BmiI | GGNNCC | 3 cut(s) | 209, 1296, 1405 |
| BmrFI | CCNGG | 5 cut(s) | 369, 591, 1056, 1194, 1491 |
| BmrI | ACTGGG | 2 cut(s) | 229, 794 |
| BmsI | GCATC | 7 cut(s) | 143, 232, 397, 419, 554, 742, 824 |
| BmuI | ACTGGG | 2 cut(s) | 229, 794 |
| BpiI | GAAGAC | 1 cut(s) | 1533 |
| BpmI | CTGGAG | 3 cut(s) | 993, 1026, 1326 |
| Bpu10I | CCTNAGC | 2 cut(s) | 173, 1180 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 143 |
| BpuMI | CCSGG | 1 cut(s) | 1491 |
| Bsa29I | ATCGAT | 1 cut(s) | 468 |
| BsaAI | YACGTR | 1 cut(s) | 1453 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1167 |
| BsaJI | CCNNGG | 4 cut(s) | 367, 590, 1054, 1290 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1366, 1396, 1559, 1589 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 805, 1055, 1193, 1325 |
| Bse1I | ACTGG | 8 cut(s) | 235, 297, 302, 473, 800, 1043, 1343, 1485 |
| Bse3DI | GCAATG | 1 cut(s) | 840 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1167 |
| BseBI | CCWGG | 4 cut(s) | 369, 591, 1056, 1194 |
| BseCI | ATCGAT | 1 cut(s) | 468 |
| BseDI | CCNNGG | 4 cut(s) | 367, 590, 1054, 1290 |
| BseGI | GGATG | 5 cut(s) | 324, 757, 1135, 1303, 1309 |
| BseJI | GATNNNNATC | 1 cut(s) | 1167 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 805, 1055, 1193, 1325 |
| BseMI | GCAATG | 1 cut(s) | 840 |
| BseMII | CTCAG | 7 cut(s) | 83, 92, 134, 187, 277, 728, 1251 |
| BseNI | ACTGG | 8 cut(s) | 235, 297, 302, 473, 800, 1043, 1343, 1485 |
| BseRI | GAGGAG | 3 cut(s) | 1339, 1371, 1586 |
| BseSI | GKGCMC | 2 cut(s) | 970, 1510 |
| BseXI | GCAGC | 4 cut(s) | 43, 70, 571, 1447 |
| BseYI | CCCAGC | 1 cut(s) | 1147 |
| BsgI | GTGCAG | 3 cut(s) | 1200, 1284, 1446 |
| BshFI | GGCC | 2 cut(s) | 742, 906 |
| BshNI | GGYRCC | 1 cut(s) | 1294 |
| BshVI | ATCGAT | 1 cut(s) | 468 |
| BsiHKAI | GWGCWC | 3 cut(s) | 442, 970, 1510 |
| BsiSI | CCGG | 1 cut(s) | 1491 |
| BslFI | GGGAC | 5 cut(s) | 105, 350, 1036, 1413, 1473 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 805, 1055, 1193, 1325 |
| BsmAI | GTCTC | 2 cut(s) | 1351, 1440 |
| BsmBI | CGTCTC | 1 cut(s) | 1440 |
| BsmFI | GGGAC | 5 cut(s) | 105, 350, 1036, 1413, 1473 |
| BsmI | GAATGC | 1 cut(s) | 1059 |
| BsnI | GGCC | 2 cut(s) | 742, 906 |
| Bsp1286I | GDGCHC | 3 cut(s) | 442, 970, 1510 |
| Bsp143I | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 143 |
| BspACI | CCGC | 1 cut(s) | 61 |
| BspANI | GGCC | 2 cut(s) | 742, 906 |
| BspCNI | CTCAG | 7 cut(s) | 82, 91, 135, 186, 276, 729, 1252 |
| BspDI | ATCGAT | 1 cut(s) | 468 |
| BspLI | GGNNCC | 3 cut(s) | 209, 1296, 1405 |
| BspMAI | CTGCAG | 1 cut(s) | 27 |
| BspMI | ACCTGC | 1 cut(s) | 1306 |
| BspPI | GGATC | 6 cut(s) | 163, 202, 206, 215, 443, 464 |
| BspT107I | GGYRCC | 1 cut(s) | 1294 |
| BspTI | CTTAAG | 2 cut(s) | 481, 518 |
| BsrDI | GCAATG | 1 cut(s) | 840 |
| BsrI | ACTGG | 8 cut(s) | 235, 297, 302, 473, 800, 1043, 1343, 1485 |
| BssECI | CCNNGG | 4 cut(s) | 367, 590, 1054, 1290 |
| BssMI | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| BssSI | CACGAG | 2 cut(s) | 821, 888 |
| BssT1I | CCWWGG | 1 cut(s) | 1290 |
| Bst2BI | CACGAG | 2 cut(s) | 821, 888 |
| Bst2UI | CCWGG | 4 cut(s) | 369, 591, 1056, 1194 |
| Bst4CI | ACNGT | 6 cut(s) | 274, 604, 919, 1050, 1089, 1221 |
| Bst6I | CTCTTC | 2 cut(s) | 2, 979 |
| BstAFI | CTTAAG | 2 cut(s) | 481, 518 |
| BstBAI | YACGTR | 1 cut(s) | 1453 |
| BstC8I | GCNNGC | 2 cut(s) | 999, 1458 |
| BstDEI | CTNAG | 8 cut(s) | 69, 78, 143, 173, 263, 737, 1180, 1260 |
| BstF5I | GGATG | 5 cut(s) | 324, 757, 1135, 1303, 1309 |
| BstHHI | GCGC | 1 cut(s) | 847 |
| BstKTI | GATC | 7 cut(s) | 171, 201, 210, 418, 451, 472, 1572 |
| BstMAI | GTCTC | 2 cut(s) | 1351, 1440 |
| BstMBI | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 31, 37, 58, 132, 153, 380, 739, 1469, 1478 |
| BstNI | CCWGG | 4 cut(s) | 369, 591, 1056, 1194 |
| BstSCI | CCNGG | 5 cut(s) | 367, 589, 1054, 1192, 1489 |
| BstSFI | CTRYAG | 3 cut(s) | 23, 270, 1467 |
| BstSLI | GKGCMC | 2 cut(s) | 970, 1510 |
| BstV1I | GCAGC | 4 cut(s) | 43, 70, 571, 1447 |
| BstV2I | GAAGAC | 1 cut(s) | 1533 |
| BstX2I | RGATCY | 3 cut(s) | 198, 207, 1569 |
| BstYI | RGATCY | 3 cut(s) | 198, 207, 1569 |
| Bsu15I | ATCGAT | 1 cut(s) | 468 |
| BsuRI | GGCC | 2 cut(s) | 742, 906 |
| BsuTUI | ATCGAT | 1 cut(s) | 468 |
| BtgZI | GCGATG | 1 cut(s) | 121 |
| BtsCI | GGATG | 5 cut(s) | 324, 757, 1135, 1303, 1309 |
| BtsIMutI | CAGTG | 3 cut(s) | 271, 480, 1085 |
| BveI | ACCTGC | 1 cut(s) | 1306 |
| Cac8I | GCNNGC | 2 cut(s) | 999, 1458 |
| CfoI | GCGC | 1 cut(s) | 847 |
| Cfr13I | GGNCC | 2 cut(s) | 310, 495 |
| ClaI | ATCGAT | 1 cut(s) | 468 |
| CseI | GACGC | 2 cut(s) | 145, 1461 |
| CsiI | ACCWGGT | 1 cut(s) | 1192 |
| Csp6I | GTAC | 4 cut(s) | 1046, 1197, 1295, 1592 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 837, 872 |
| CviAII | CATG | 4 cut(s) | 221, 394, 1314, 1325 |
| CviQI | GTAC | 4 cut(s) | 1046, 1197, 1295, 1592 |
| DdeI | CTNAG | 8 cut(s) | 69, 78, 143, 173, 263, 737, 1180, 1260 |
| DpnI | GATC | 7 cut(s) | 170, 200, 209, 417, 450, 471, 1571 |
| DpnII | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 99 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 99 |
| Eam1104I | CTCTTC | 2 cut(s) | 2, 979 |
| EarI | CTCTTC | 2 cut(s) | 2, 979 |
| Eco130I | CCWWGG | 1 cut(s) | 1290 |
| Eco147I | AGGCCT | 1 cut(s) | 742 |
| Eco32I | GATATC | 1 cut(s) | 346 |
| Eco47I | GGWCC | 2 cut(s) | 310, 495 |
| Eco57I | CTGAAG | 3 cut(s) | 133, 271, 810 |
| Eco72I | CACGTG | 1 cut(s) | 1453 |
| EcoO109I | RGGNCCY | 1 cut(s) | 495 |
| EcoRI | GAATTC | 2 cut(s) | 82, 1335 |
| EcoRII | CCWGG | 4 cut(s) | 367, 589, 1054, 1192 |
| EcoRV | GATATC | 1 cut(s) | 346 |
| EcoT14I | CCWWGG | 1 cut(s) | 1290 |
| EcoT22I | ATGCAT | 1 cut(s) | 412 |
| ErhI | CCWWGG | 1 cut(s) | 1290 |
| Esp3I | CGTCTC | 1 cut(s) | 1440 |
| FaeI | CATG | 4 cut(s) | 224, 397, 1317, 1328 |
| FaqI | GGGAC | 5 cut(s) | 105, 350, 1036, 1413, 1473 |
| FatI | CATG | 4 cut(s) | 220, 393, 1313, 1324 |
| FbaI | TGATCA | 1 cut(s) | 415 |
| Fnu4HI | GCNGC | 5 cut(s) | 32, 59, 62, 560, 1461 |
| FokI | GGATG | 5 cut(s) | 311, 764, 1122, 1290, 1296 |
| Fsp4HI | GCNGC | 5 cut(s) | 32, 59, 62, 560, 1461 |
| FspBI | CTAG | 1 cut(s) | 1332 |
| GlaI | GCGC | 1 cut(s) | 846 |
| GluI | GCNGC | 5 cut(s) | 32, 59, 62, 560, 1461 |
| GsaI | CCCAGC | 1 cut(s) | 1151 |
| GsuI | CTGGAG | 3 cut(s) | 993, 1026, 1326 |
| HaeIII | GGCC | 2 cut(s) | 742, 906 |
| HapII | CCGG | 1 cut(s) | 1491 |
| HgaI | GACGC | 2 cut(s) | 145, 1461 |
| HhaI | GCGC | 1 cut(s) | 847 |
| Hin1II | CATG | 4 cut(s) | 224, 397, 1317, 1328 |
| Hin6I | GCGC | 1 cut(s) | 845 |
| HinP1I | GCGC | 1 cut(s) | 845 |
| HinfI | GANTC | 6 cut(s) | 67, 93, 577, 607, 1426, 1514 |
| HpaII | CCGG | 1 cut(s) | 1491 |
| Hpy166II | GTNNAC | 2 cut(s) | 968, 1508 |
| Hpy188III | TCNNGA | 7 cut(s) | 71, 90, 166, 205, 890, 1010, 1332 |
| Hpy8I | GTNNAC | 2 cut(s) | 968, 1508 |
| Hpy99I | CGWCG | 2 cut(s) | 161, 164 |
| HpyAV | CCTTC | 5 cut(s) | 955, 1002, 1296, 1428, 1542 |
| HpyCH4III | ACNGT | 6 cut(s) | 274, 604, 919, 1050, 1089, 1221 |
| HpyCH4IV | ACGT | 2 cut(s) | 1230, 1452 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 31, 37, 58, 132, 153, 380, 739, 1469, 1478 |
| HpyF3I | CTNAG | 8 cut(s) | 69, 78, 143, 173, 263, 737, 1180, 1260 |
| HpySE526I | ACGT | 2 cut(s) | 1230, 1452 |
| Hsp92II | CATG | 4 cut(s) | 224, 397, 1317, 1328 |
| HspAI | GCGC | 1 cut(s) | 845 |
| KpnI | GGTACC | 1 cut(s) | 1298 |
| Ksp22I | TGATCA | 1 cut(s) | 415 |
| Kzo9I | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| LmnI | GCTCC | 5 cut(s) | 28, 712, 1006, 1384, 1553 |
| Lsp1109I | GCAGC | 4 cut(s) | 43, 70, 571, 1447 |
| LweI | GCATC | 7 cut(s) | 143, 232, 397, 419, 554, 742, 824 |
| MabI | ACCWGGT | 1 cut(s) | 1192 |
| MaeI | CTAG | 1 cut(s) | 1332 |
| MaeII | ACGT | 2 cut(s) | 1230, 1452 |
| MaeIII | GTNAC | 3 cut(s) | 304, 1089, 1221 |
| MalI | GATC | 7 cut(s) | 170, 200, 209, 417, 450, 471, 1571 |
| MboI | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| MboII | GAAGA | 8 cut(s) | 19, 78, 193, 942, 966, 1097, 1196, 1533 |
| MflI | RGATCY | 3 cut(s) | 198, 207, 1569 |
| MhlI | GDGCHC | 3 cut(s) | 442, 970, 1510 |
| MlyI | GAGTC | 3 cut(s) | 61, 87, 1435 |
| MmeI | TCCRAC | 2 cut(s) | 705, 1010 |
| Mph1103I | ATGCAT | 1 cut(s) | 412 |
| MseI | TTAA | 7 cut(s) | 258, 482, 519, 654, 707, 909, 933 |
| MslI | CAYNNNNRTG | 1 cut(s) | 219 |
| MspA1I | CMGCKG | 2 cut(s) | 61, 1460 |
| MspCI | CTTAAG | 2 cut(s) | 481, 518 |
| MspI | CCGG | 1 cut(s) | 1491 |
| MspR9I | CCNGG | 5 cut(s) | 369, 591, 1056, 1194, 1491 |
| Mva1269I | GAATGC | 1 cut(s) | 1059 |
| MvaI | CCWGG | 4 cut(s) | 369, 591, 1056, 1194 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 31, 37, 58, 132, 153, 380, 739, 1469, 1478 |
| NciI | CCSGG | 1 cut(s) | 1491 |
| NdeII | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| NlaIII | CATG | 4 cut(s) | 224, 397, 1317, 1328 |
| NlaIV | GGNNCC | 3 cut(s) | 209, 1296, 1405 |
| NmuCI | GTSAC | 2 cut(s) | 1089, 1221 |
| NsiI | ATGCAT | 1 cut(s) | 412 |
| PceI | AGGCCT | 1 cut(s) | 742 |
| PctI | GAATGC | 1 cut(s) | 1059 |
| PfeI | GAWTC | 3 cut(s) | 577, 607, 1514 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1325 |
| PfoI | TCCNGGA | 1 cut(s) | 1489 |
| PkrI | GCNGC | 5 cut(s) | 33, 60, 63, 561, 1462 |
| PleI | GAGTC | 3 cut(s) | 61, 87, 1434 |
| PmaCI | CACGTG | 1 cut(s) | 1453 |
| PmlI | CACGTG | 1 cut(s) | 1453 |
| PpsI | GAGTC | 3 cut(s) | 61, 87, 1434 |
| Ppu21I | YACGTR | 1 cut(s) | 1453 |
| PpuMI | RGGWCCY | 1 cut(s) | 495 |
| Psp5II | RGGWCCY | 1 cut(s) | 495 |
| Psp6I | CCWGG | 4 cut(s) | 367, 589, 1054, 1192 |
| PspCI | CACGTG | 1 cut(s) | 1453 |
| PspFI | CCCAGC | 1 cut(s) | 1147 |
| PspGI | CCWGG | 4 cut(s) | 367, 589, 1054, 1192 |
| PspN4I | GGNNCC | 3 cut(s) | 209, 1296, 1405 |
| PspPI | GGNCC | 2 cut(s) | 310, 495 |
| PspPPI | RGGWCCY | 1 cut(s) | 495 |
| PstI | CTGCAG | 1 cut(s) | 27 |
| PsuI | RGATCY | 3 cut(s) | 198, 207, 1569 |
| PvuII | CAGCTG | 1 cut(s) | 1460 |
| RsaI | GTAC | 4 cut(s) | 1047, 1198, 1296, 1593 |
| RsaNI | GTAC | 4 cut(s) | 1046, 1197, 1295, 1592 |
| RseI | CAYNNNNRTG | 1 cut(s) | 219 |
| SaqAI | TTAA | 7 cut(s) | 258, 482, 519, 654, 707, 909, 933 |
| SatI | GCNGC | 5 cut(s) | 32, 59, 62, 560, 1461 |
| Sau3AI | GATC | 7 cut(s) | 168, 198, 207, 415, 448, 469, 1569 |
| Sau96I | GGNCC | 2 cut(s) | 310, 495 |
| SchI | GAGTC | 3 cut(s) | 61, 87, 1435 |
| ScrFI | CCNGG | 5 cut(s) | 369, 591, 1056, 1194, 1491 |
| SduI | GDGCHC | 3 cut(s) | 442, 970, 1510 |
| SexAI | ACCWGGT | 1 cut(s) | 1192 |
| SfaNI | GCATC | 7 cut(s) | 143, 232, 397, 419, 554, 742, 824 |
| SfcI | CTRYAG | 3 cut(s) | 23, 270, 1467 |
| SinI | GGWCC | 2 cut(s) | 310, 495 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 219 |
| SmlI | CTYRAG | 2 cut(s) | 481, 518 |
| SmoI | CTYRAG | 2 cut(s) | 481, 518 |
| SseBI | AGGCCT | 1 cut(s) | 742 |
| SsiI | CCGC | 1 cut(s) | 61 |
| SspMI | CTAG | 1 cut(s) | 1332 |
| StuI | AGGCCT | 1 cut(s) | 742 |
| StyD4I | CCNGG | 5 cut(s) | 367, 589, 1054, 1192, 1489 |
| StyI | CCWWGG | 1 cut(s) | 1290 |
| TaaI | ACNGT | 6 cut(s) | 274, 604, 919, 1050, 1089, 1221 |
| TaiI | ACGT | 2 cut(s) | 1233, 1455 |
| TaqI | TCGA | 1 cut(s) | 468 |
| TauI | GCSGC | 1 cut(s) | 64 |
| TfiI | GAWTC | 3 cut(s) | 577, 607, 1514 |
| Tru1I | TTAA | 7 cut(s) | 258, 482, 519, 654, 707, 909, 933 |
| Tru9I | TTAA | 7 cut(s) | 258, 482, 519, 654, 707, 909, 933 |
| TscAI | CASTG | 3 cut(s) | 271, 480, 1092 |
| TseFI | GTSAC | 2 cut(s) | 1089, 1221 |
| TseI | GCWGC | 4 cut(s) | 31, 58, 559, 1460 |
| Tsp45I | GTSAC | 2 cut(s) | 1089, 1221 |
| TspDTI | ATGAA | 6 cut(s) | 1091, 1124, 1157, 1223, 1533, 1595 |
| TspGWI | ACGGA | 1 cut(s) | 323 |
| TspRI | CASTG | 3 cut(s) | 271, 480, 1092 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1325 |
| Vha464I | CTTAAG | 2 cut(s) | 481, 518 |
| VneI | GTGCAC | 2 cut(s) | 966, 1506 |
| VpaK11BI | GGWCC | 2 cut(s) | 310, 495 |
| XapI | RAATTY | 4 cut(s) | 82, 694, 1335, 1583 |
| XbaI | TCTAGA | 1 cut(s) | 1331 |
| XspI | CTAG | 1 cut(s) | 1332 |
| Zsp2I | ATGCAT | 1 cut(s) | 412 |