BEST Arabidopsis thaliana protein match is hydroxyproline-rich glycoprotein family protein (TAIR AT3G56590.2)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10790 |
| fragaria_vesca | FvH4_5g29560 FvH4_5g29560 |
| malus_domestica | MD08G1228500.v1.1 MD08G1228600.v1.1 MD15G1422400.v1.1 MD15G1422500.v1.1 |
| prunus_persica | Prupe.1G567800_v2.0.a1 |
| pyrus_communis | pycom08g19900 pycom08g19910 pycom15g37430 pycom15g37440 |
| rosa_chinensis | RchiOBHm_Chr7g0222521 |
| rosa_laevigata | RLG00000002048 |
| rosa_multiflora | Rmu_ssc0000146.1_g000026 Rmu_ssc0000385.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00236690 |
| rosa_rugosa | Rorug07G0210200 |
| rosa_samantha | Rh7AG351900 Rh7BG342500 Rh7CG369300 Rh7DG348600 |
| rosa_wichuraiana | Rw7G029710 Rw7G030030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 1064 |
| AciI | CCGC | 5 cut(s) | 395, 953, 1062, 1134, 1157 |
| AclI | AACGTT | 1 cut(s) | 305 |
| AclWI | GGATC | 1 cut(s) | 197 |
| AcsI | RAATTY | 1 cut(s) | 448 |
| AcuI | CTGAAG | 3 cut(s) | 25, 786, 861 |
| AfaI | GTAC | 2 cut(s) | 127, 760 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1067 |
| AflII | CTTAAG | 2 cut(s) | 235, 272 |
| AgsI | TTSAA | 7 cut(s) | 381, 429, 579, 599, 605, 652, 754 |
| AjnI | CCWGG | 6 cut(s) | 121, 343, 364, 522, 1066, 1090 |
| Alw26I | GTCTC | 2 cut(s) | 1128, 1182 |
| AlwI | GGATC | 1 cut(s) | 197 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 403 |
| AoxI | GGCC | 3 cut(s) | 494, 697, 1044 |
| ApeKI | GCWGC | 2 cut(s) | 374, 469 |
| ApoI | RAATTY | 1 cut(s) | 448 |
| AspLEI | GCGC | 1 cut(s) | 1066 |
| AspS9I | GGNCC | 3 cut(s) | 520, 836, 1045 |
| AsuHPI | GGTGA | 6 cut(s) | 467, 804, 879, 1008, 1050, 1122 |
| AvaII | GGWCC | 2 cut(s) | 520, 836 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 117, 150, 961, 994 |
| BbvCI | CCTCAGC | 1 cut(s) | 473 |
| BbvI | GCAGC | 2 cut(s) | 361, 481 |
| BccI | CCATC | 3 cut(s) | 817, 847, 1135 |
| BceAI | ACGGC | 1 cut(s) | 312 |
| BciT130I | CCWGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| BciVI | GTATCC | 1 cut(s) | 989 |
| BcoDI | GTCTC | 2 cut(s) | 1128, 1182 |
| BfaI | CTAG | 4 cut(s) | 531, 975, 999, 1086 |
| BfmI | CTRYAG | 2 cut(s) | 582, 831 |
| BfrI | CTTAAG | 2 cut(s) | 235, 272 |
| BfuI | GTATCC | 1 cut(s) | 989 |
| BisI | GCNGC | 2 cut(s) | 375, 470 |
| BlsI | GCNGC | 2 cut(s) | 376, 471 |
| Bme1390I | CCNGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| Bme18I | GGWCC | 2 cut(s) | 520, 836 |
| BmgT120I | GGNCC | 3 cut(s) | 520, 836, 1045 |
| BmiI | GGNNCC | 1 cut(s) | 1047 |
| BmrFI | CCNGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| BmrI | ACTGGG | 1 cut(s) | 587 |
| BmsI | GCATC | 4 cut(s) | 173, 308, 496, 1064 |
| BmuI | ACTGGG | 1 cut(s) | 587 |
| BpmI | CTGGAG | 2 cut(s) | 774, 1089 |
| Bpu10I | CCTNAGC | 1 cut(s) | 473 |
| BpuEI | CTTGAG | 2 cut(s) | 1023, 1138 |
| BsaI | GGTCTC | 1 cut(s) | 1128 |
| BsaJI | CCNNGG | 4 cut(s) | 121, 344, 365, 1171 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 772, 802, 892, 922, 1179 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1067 |
| Bse1I | ACTGG | 5 cut(s) | 51, 56, 176, 227, 593 |
| Bse3DI | GCAATG | 1 cut(s) | 546 |
| BseBI | CCWGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| BseDI | CCNNGG | 4 cut(s) | 121, 344, 365, 1171 |
| BseGI | GGATG | 4 cut(s) | 550, 904, 940, 1165 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1067 |
| BseMI | GCAATG | 1 cut(s) | 546 |
| BseMII | CTCAG | 3 cut(s) | 236, 464, 677 |
| BseNI | ACTGG | 5 cut(s) | 51, 56, 176, 227, 593 |
| BseRI | GAGGAG | 2 cut(s) | 900, 951 |
| BseXI | GCAGC | 2 cut(s) | 361, 481 |
| Bsh1236I | CGCG | 1 cut(s) | 1064 |
| BshFI | GGCC | 3 cut(s) | 496, 699, 1046 |
| BslFI | GGGAC | 3 cut(s) | 104, 645, 1014 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1067 |
| BsmAI | GTCTC | 2 cut(s) | 1128, 1182 |
| BsmFI | GGGAC | 3 cut(s) | 104, 645, 1014 |
| BsnI | GGCC | 3 cut(s) | 496, 699, 1046 |
| Bso31I | GGTCTC | 1 cut(s) | 1128 |
| Bsp143I | GATC | 2 cut(s) | 202, 248 |
| BspACI | CCGC | 5 cut(s) | 395, 953, 1062, 1134, 1157 |
| BspANI | GGCC | 3 cut(s) | 496, 699, 1046 |
| BspCNI | CTCAG | 3 cut(s) | 237, 465, 676 |
| BspFNI | CGCG | 1 cut(s) | 1064 |
| BspLI | GGNNCC | 1 cut(s) | 1047 |
| BspMAI | CTGCAG | 1 cut(s) | 835 |
| BspPI | GGATC | 1 cut(s) | 197 |
| BspTI | CTTAAG | 2 cut(s) | 235, 272 |
| BspTNI | GGTCTC | 1 cut(s) | 1128 |
| BsrDI | GCAATG | 1 cut(s) | 546 |
| BsrI | ACTGG | 5 cut(s) | 51, 56, 176, 227, 593 |
| BssECI | CCNNGG | 4 cut(s) | 121, 344, 365, 1171 |
| BssMI | GATC | 2 cut(s) | 202, 248 |
| BssT1I | CCWWGG | 1 cut(s) | 1171 |
| Bst2UI | CCWGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| Bst4CI | ACNGT | 6 cut(s) | 28, 161, 358, 657, 868, 1193 |
| Bst6I | CTCTTC | 1 cut(s) | 880 |
| BstAFI | CTTAAG | 2 cut(s) | 235, 272 |
| BstDEI | CTNAG | 5 cut(s) | 245, 473, 491, 663, 821 |
| BstF5I | GGATG | 4 cut(s) | 550, 904, 940, 1165 |
| BstFNI | CGCG | 1 cut(s) | 1064 |
| BstHHI | GCGC | 1 cut(s) | 1066 |
| BstKTI | GATC | 2 cut(s) | 205, 251 |
| BstMAI | GTCTC | 2 cut(s) | 1128, 1182 |
| BstMBI | GATC | 2 cut(s) | 202, 248 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 394, 466, 493, 1052, 1061 |
| BstNI | CCWGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| BstNSI | RCATGY | 1 cut(s) | 1055 |
| BstSCI | CCNGG | 6 cut(s) | 121, 343, 364, 522, 1066, 1090 |
| BstSFI | CTRYAG | 2 cut(s) | 582, 831 |
| BstUI | CGCG | 1 cut(s) | 1064 |
| BstV1I | GCAGC | 2 cut(s) | 361, 481 |
| BsuI | GTATCC | 1 cut(s) | 989 |
| BsuRI | GGCC | 3 cut(s) | 496, 699, 1046 |
| BtsCI | GGATG | 4 cut(s) | 550, 904, 940, 1165 |
| BtsIMutI | CAGTG | 3 cut(s) | 234, 354, 1198 |
| CaiI | CAGNNNCTG | 1 cut(s) | 403 |
| CfoI | GCGC | 1 cut(s) | 1066 |
| Cfr13I | GGNCC | 3 cut(s) | 520, 836, 1045 |
| Csp6I | GTAC | 2 cut(s) | 126, 759 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 630, 665 |
| CviAII | CATG | 3 cut(s) | 148, 918, 1052 |
| CviQI | GTAC | 2 cut(s) | 126, 759 |
| DdeI | CTNAG | 5 cut(s) | 245, 473, 491, 663, 821 |
| DpnI | GATC | 2 cut(s) | 204, 250 |
| DpnII | GATC | 2 cut(s) | 202, 248 |
| Eam1104I | CTCTTC | 1 cut(s) | 880 |
| EarI | CTCTTC | 1 cut(s) | 880 |
| Eco130I | CCWWGG | 1 cut(s) | 1171 |
| Eco147I | AGGCCT | 1 cut(s) | 496 |
| Eco31I | GGTCTC | 1 cut(s) | 1128 |
| Eco32I | GATATC | 1 cut(s) | 100 |
| Eco47I | GGWCC | 2 cut(s) | 520, 836 |
| Eco57I | CTGAAG | 3 cut(s) | 25, 786, 861 |
| EcoRII | CCWGG | 6 cut(s) | 121, 343, 364, 522, 1066, 1090 |
| EcoRV | GATATC | 1 cut(s) | 100 |
| EcoT14I | CCWWGG | 1 cut(s) | 1171 |
| EcoT22I | ATGCAT | 1 cut(s) | 1057 |
| ErhI | CCWWGG | 1 cut(s) | 1171 |
| FaeI | CATG | 3 cut(s) | 151, 921, 1055 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 597, 629 |
| FaqI | GGGAC | 3 cut(s) | 104, 645, 1014 |
| FatI | CATG | 3 cut(s) | 147, 917, 1051 |
| FauI | CCCGC | 3 cut(s) | 960, 1069, 1141 |
| Fnu4HI | GCNGC | 2 cut(s) | 375, 470 |
| FokI | GGATG | 4 cut(s) | 557, 891, 927, 1172 |
| Fsp4HI | GCNGC | 2 cut(s) | 375, 470 |
| FspBI | CTAG | 4 cut(s) | 531, 975, 999, 1086 |
| GlaI | GCGC | 1 cut(s) | 1065 |
| GluI | GCNGC | 2 cut(s) | 375, 470 |
| GsuI | CTGGAG | 2 cut(s) | 774, 1089 |
| HaeIII | GGCC | 3 cut(s) | 496, 699, 1046 |
| HhaI | GCGC | 1 cut(s) | 1066 |
| Hin1II | CATG | 3 cut(s) | 151, 921, 1055 |
| Hin6I | GCGC | 1 cut(s) | 1064 |
| HinP1I | GCGC | 1 cut(s) | 1064 |
| HindIII | AAGCTT | 1 cut(s) | 606 |
| HinfI | GANTC | 7 cut(s) | 331, 351, 361, 400, 587, 958, 1027 |
| HphI | GGTGA | 6 cut(s) | 467, 804, 879, 1008, 1050, 1122 |
| Hpy166II | GTNNAC | 2 cut(s) | 761, 871 |
| Hpy188I | TCNGA | 4 cut(s) | 44, 202, 666, 737 |
| Hpy188III | TCNNGA | 1 cut(s) | 62 |
| Hpy8I | GTNNAC | 2 cut(s) | 761, 871 |
| HpyAV | CCTTC | 5 cut(s) | 748, 795, 807, 894, 1029 |
| HpyCH4III | ACNGT | 6 cut(s) | 28, 161, 358, 657, 868, 1193 |
| HpyCH4IV | ACGT | 1 cut(s) | 305 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 394, 466, 493, 1052, 1061 |
| HpyF3I | CTNAG | 5 cut(s) | 245, 473, 491, 663, 821 |
| HpySE526I | ACGT | 1 cut(s) | 305 |
| Hsp92II | CATG | 3 cut(s) | 151, 921, 1055 |
| HspAI | GCGC | 1 cut(s) | 1064 |
| Kzo9I | GATC | 2 cut(s) | 202, 248 |
| LmnI | GCTCC | 5 cut(s) | 466, 799, 811, 865, 953 |
| Lsp1109I | GCAGC | 2 cut(s) | 361, 481 |
| LweI | GCATC | 4 cut(s) | 173, 308, 496, 1064 |
| MaeI | CTAG | 4 cut(s) | 531, 975, 999, 1086 |
| MaeII | ACGT | 1 cut(s) | 305 |
| MaeIII | GTNAC | 1 cut(s) | 559 |
| MalI | GATC | 2 cut(s) | 204, 250 |
| MboI | GATC | 2 cut(s) | 202, 248 |
| MboII | GAAGA | 2 cut(s) | 792, 867 |
| MluCI | AATT | 4 cut(s) | 86, 424, 448, 669 |
| MlyI | GAGTC | 2 cut(s) | 952, 1036 |
| MmeI | TCCRAC | 2 cut(s) | 803, 887 |
| Mph1103I | ATGCAT | 1 cut(s) | 1057 |
| MseI | TTAA | 4 cut(s) | 236, 273, 408, 969 |
| MspA1I | CMGCKG | 1 cut(s) | 472 |
| MspCI | CTTAAG | 2 cut(s) | 235, 272 |
| MspR9I | CCNGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| MvaI | CCWGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| MvnI | CGCG | 1 cut(s) | 1064 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 394, 466, 493, 1052, 1061 |
| NdeII | GATC | 2 cut(s) | 202, 248 |
| NlaIII | CATG | 3 cut(s) | 151, 921, 1055 |
| NlaIV | GGNNCC | 1 cut(s) | 1047 |
| NmeAIII | GCCGAG | 1 cut(s) | 675 |
| NsiI | ATGCAT | 1 cut(s) | 1057 |
| NspI | RCATGY | 1 cut(s) | 1055 |
| PceI | AGGCCT | 1 cut(s) | 496 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 302 |
| PfeI | GAWTC | 5 cut(s) | 331, 351, 361, 400, 587 |
| PkrI | GCNGC | 2 cut(s) | 376, 471 |
| PleI | GAGTC | 2 cut(s) | 952, 1035 |
| PpsI | GAGTC | 2 cut(s) | 952, 1035 |
| Psp1406I | AACGTT | 1 cut(s) | 305 |
| Psp6I | CCWGG | 6 cut(s) | 121, 343, 364, 522, 1066, 1090 |
| PspGI | CCWGG | 6 cut(s) | 121, 343, 364, 522, 1066, 1090 |
| PspN4I | GGNNCC | 1 cut(s) | 1047 |
| PspPI | GGNCC | 3 cut(s) | 520, 836, 1045 |
| PstI | CTGCAG | 1 cut(s) | 835 |
| PstNI | CAGNNNCTG | 1 cut(s) | 403 |
| PvuII | CAGCTG | 1 cut(s) | 472 |
| RsaI | GTAC | 2 cut(s) | 127, 760 |
| RsaNI | GTAC | 2 cut(s) | 126, 759 |
| SaqAI | TTAA | 4 cut(s) | 236, 273, 408, 969 |
| SatI | GCNGC | 2 cut(s) | 375, 470 |
| Sau3AI | GATC | 2 cut(s) | 202, 248 |
| Sau96I | GGNCC | 3 cut(s) | 520, 836, 1045 |
| SchI | GAGTC | 2 cut(s) | 952, 1036 |
| ScrFI | CCNGG | 6 cut(s) | 123, 345, 366, 524, 1068, 1092 |
| SfaNI | GCATC | 4 cut(s) | 173, 308, 496, 1064 |
| SfcI | CTRYAG | 2 cut(s) | 582, 831 |
| SinI | GGWCC | 2 cut(s) | 520, 836 |
| SmlI | CTYRAG | 4 cut(s) | 235, 272, 1038, 1117 |
| SmoI | CTYRAG | 4 cut(s) | 235, 272, 1038, 1117 |
| Sse9I | AATT | 4 cut(s) | 86, 424, 448, 669 |
| SseBI | AGGCCT | 1 cut(s) | 496 |
| SsiI | CCGC | 5 cut(s) | 395, 953, 1062, 1134, 1157 |
| SspMI | CTAG | 4 cut(s) | 531, 975, 999, 1086 |
| StuI | AGGCCT | 1 cut(s) | 496 |
| StyD4I | CCNGG | 6 cut(s) | 121, 343, 364, 522, 1066, 1090 |
| StyI | CCWWGG | 1 cut(s) | 1171 |
| TaaI | ACNGT | 6 cut(s) | 28, 161, 358, 657, 868, 1193 |
| TaiI | ACGT | 1 cut(s) | 308 |
| TaqI | TCGA | 1 cut(s) | 61 |
| TasI | AATT | 4 cut(s) | 86, 424, 448, 669 |
| TfiI | GAWTC | 5 cut(s) | 331, 351, 361, 400, 587 |
| Tru1I | TTAA | 4 cut(s) | 236, 273, 408, 969 |
| Tru9I | TTAA | 4 cut(s) | 236, 273, 408, 969 |
| TscAI | CASTG | 3 cut(s) | 234, 361, 1198 |
| TseI | GCWGC | 2 cut(s) | 374, 469 |
| TspGWI | ACGGA | 1 cut(s) | 700 |
| TspRI | CASTG | 3 cut(s) | 234, 361, 1198 |
| Vha464I | CTTAAG | 2 cut(s) | 235, 272 |
| VpaK11BI | GGWCC | 2 cut(s) | 520, 836 |
| XapI | RAATTY | 1 cut(s) | 448 |
| XceI | RCATGY | 1 cut(s) | 1055 |
| XspI | CTAG | 4 cut(s) | 531, 975, 999, 1086 |
| Zsp2I | ATGCAT | 1 cut(s) | 1057 |