MD15G1429400.v1.1

Conserved oligomeric Golgi complex subunit 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0005295
Physical Location & Seq
Reverse (-)
52987834 .. 52994067
6234 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1429400.v1.1.491

Sequence Viewer

Length: 3081 bp
ATGAGAGTGAATTCCGGCGACGGCCTCAGCGGTGCCTCCGCCGCTGCTGCCGCCGCCTCCCGAGATGCCGAGTCCCTCTTCCGCTCCAAACCCATTGCCGAGATCAGAACCGTCGAGTCCACCACCCGCAGCCAGATCCAGTCCAAGAAGGAGGAGCTCCGCCAACTTGTCGGCACTCGCTACCGCGATCTCATTGACTCCGCCGATTCCATCGTCCTCATGAAGCGCTCCTCCCACTCCATCTCCCAAAACCTCTCCTCCGTCCACTACTCTATCAATTCCCTCTCCTCCGCATCCTCCGCATCCTCCGCCGACAACCCCGACTCCTCCCGCCACGACCCTACCCGCCACCGCATCTACGGAATCGCCTGCCGGGTCAAGTACCTCGTCGACACTCCGGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTTCTCGAGTCCGCCGCCCGCTACGTCCGCGCCAGTCACGTGCACTCCATTCTCGCCCTCCCTGCTCACGTGCGCTTCCTCTCCAACTTCCCTCTCCTCCAGCACCAGTGGCAGATCGTCGACAGTTTCAAGTCCCAGATCTCTCAGCGCGCCCGCGACCGCCTCTTCGATCGAGAGCTCCACCTGCCCGTTTCCTCCTACGCCGACGCATTGGCCGCCGTCGCTTTGATCGACGACCTCCGCCCCGAGTACGTACTTTCCCTCTTCCTCGACACTCGGAAGTCGTGGGTTTCCGGGATACTCAATGCTTGCCGTCCCGATGCTCAGTGCTCCAACGTCGTTTCGGTGCTGTGCGAGGCTCTGCGGGTGATTCAGGTGACTGTGGGGCAGGTTGGTGAGCTCTTCTTGCGGGTGCTCAGTGACATGCCGTTGTTCTACAAGGTGGTATTGGGTAGTCCTCCTGCATCCCAATTGTTCGGTGGAATTCCCAATCCAGATGAGGAGATCAAGCTTTGGAATTCGTTTCGGGAGAAACTCGAGTCTGCCATGGGAATGCTGGACAAGGATTACATTGCCAAGGCTTGTTGCTCTTGGCTTAGCGACTGCGGAGGCCGGATGGTGGATAGGATCAACGGGAGGTTCCTCATCGACGCGATTGGCAGCGGCCACGAGCTCGCCTCGGCTGAGAAGTTGATTAGGGAGACCATGAACAGCAAGGAGGTATTAGAAGGGAGCTTGGAGTGGCTCAAGAACGTGTTCGGGTCCAACATTGACCTGCCGTGGAGTCGAATGAGTGAACTTGTTCTCGGAGATGATTCAGATCTCTGGGACAGTATCTTCGAACCTGCATTCGTCGCCAGGATGAAGGTGATTGTGGCATACAGGTTCAAGGAGCTCATGAAGGCCGTGAACATTAAGGAGGGCAAACCCATCGATTTCCTTGGTGCTGGTGGTGGAGTTTGGTTTGTGGAAACCAAATCGAATAACGCTAAGAAAGGTACTGCTAGTGCTCTGCCTTGTGAAGAGAATTGTCTCAATTTCTATTTTGGTCCTCAAGTGAGTAGTATTCGAGATGCGGTGGATAGTAGTTGTCAGGATGTTCTTGATGACTTGCTGTGTTTCTTAGAATCGCCAAAGGCAGCTCTTAGGTTAAAGGATCTGTCACCTTATCTACAAGATAAGTGTTGCCAGACCATATCCAATATATTGGTGCAACTAAATAGTGAGCTTGATAATTTGGAAATTGGTAAAGACACGCAAGGGCCGGTAACTGTTGACAGGGCACTTTTCATTGGGAGACTCTTGTTTGCATTGCAGAGCCACTCCAAACACATTCCCATCATTCTTGGTCCTCCGCGGTCTTGGGTAAATGTAACAGGGTCTGTAGTTCTCGATAAGTTCCCGCCCATGTCAAGACAATCTAGAGCTCCCACTGATTCTCCAGTGCTTGATAGCCCCTCAGGTTCTAAAAGGCATACTTCATCTGCTACGGCTGCATTGCTTGGAGCAGGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATGTAACTATGCGAGATCTCCGAATTCGTGCGCATGCTTTGTGGATGTCGTGGTTGTCTGATGAGCTTTCAGTTATTCTTTCCCGTGATCTTCAAAAAGATTATGCTTTGTCATCATCAACTCCTCTGAGGGGTTGGGAAGAGACAGTTGTTAAGCAAGAGCAGTCTGATGATAACCAATCGGACATGAGAATATGGCTCCCTTGCATGCCTTCTCTCTATATAGTCTCATTTCTATTTCGCATATGTGAAGAAGTTCATCGAATTGGAGGTCATGTTCTTGACAAAACAATTCTGCAAAAGTTTGCATTAAGATTGTTGGAAAAGGTCATTGGTATTTATGGAGACTTCCTTTCTACTGTAGAGGCCGGTGGATCTCAAGTGTCAGAGAAAGGAGTTTTGCAAGTTCTGTTAGATTTGAGATTTGTTGTCGATGTCCTTTCTGGGGGTGATTCTAATACGAGTGAGGAGTCATTTGCATACCTAAAGACAAAAAGTCCTTTCAGACGGAAGCAGGACCAAAGCCACGCGAAATCTGCCATTAGAGAGCGTTTTGATGGGTTGATAAATCGTCTTTCGCAAAGATTGGATCCCATAGACTGGCTTACGTATGAGTCGTATCTTTGGGAAAATGAGAAGCAGTCCTACCAACGCCATGCTGTCCTCTTTGGATTCTTTGTTCAACTTAATCGCATGTACACAGATACTGTTCAAAAACTTCCTACTAATTCAGAGTCCAATATCATGAGATGCTCTTCAGTTCCTCGCTTCAAATACCTTCCCATCAGTGCTCCAGCATTGTCTTCAAGAGGGACAGCTAAGGCATCCATTCCAATCTCTTCGGATGATATTTCTTCAAGAAGTCCCTGGAAAGCTTATACAAATGGAGATCTTTCCAGTAAGCTTGATTTGGACGATAACTCGAGTTTTTCTGCCGCTGGAAGTAAATTTGGAGAGAGCTTAAAACTAGGATCCATGCTAACAGATGGGCAAGTGGGCATATTCAAGGATAGATCAGCAGCCGCCATGTCGTCAATTGGTGACATTCTACCTTCCCAGGCTGCAGGTCTCCTATCATCGTTCACAGCTTCCAGAGCATACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps51

Protein Analysis

1027

Amino Acids

113.62

Weight (kDa)

6.36

Isoelectric Point (pI)

49.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 20 - 97 8.5e-17 Vps51/EXO84/COG1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 624
Acc16I TGCGCA 1 cut(s) 2007
Acc36I ACCTGC 5 cut(s) 624, 811, 1215, 1285, 3029
AccB1I GGYRCC 1 cut(s) 32
AccB7I CCANNNNNTGG 1 cut(s) 2574
AccBSI CCGCTC 1 cut(s) 84
AccI GTMKAC 2 cut(s) 390, 552
AccII CGCG 7 cut(s) 186, 462, 582, 588, 1085, 1789, 2504
AccIII TCCGGA 1 cut(s) 397
AclWI GGATC 8 cut(s) 130, 1067, 1596, 2356, 2558, 2571, 2940, 2953
AcoI YGGCCR 2 cut(s) 645, 1096
AcsI RAATTY 5 cut(s) 10, 915, 949, 1998, 2921
AcuI CTGAAG 1 cut(s) 2715
AcvI CACGTG 2 cut(s) 472, 502
AfaI GTAC 5 cut(s) 383, 683, 687, 1432, 2672
AfeI AGCGCT 1 cut(s) 227
AfiI CCNNNNNNNGG 4 cut(s) 1051, 2105, 2419, 2574
AflIII ACRYGT 1 cut(s) 1185
AhdI GACNNNNNGTC 1 cut(s) 2469
AjnI CCWGG 3 cut(s) 1289, 2840, 3030
AjuI GAANNNNNNNTTGG 2 cut(s) 2289, 2321
AloI GAACNNNNNNTCC 4 cut(s) 2235, 2267, 2637, 2669
Alw26I GTCTC 7 cut(s) 1127, 1469, 1723, 2111, 2206, 2313, 3047
Alw44I GTGCAC 1 cut(s) 473
AlwI GGATC 8 cut(s) 130, 1067, 1596, 2356, 2558, 2571, 2940, 2953
AlwNI CAGNNNCTG 2 cut(s) 1814, 2681
Ama87I CYCGRG 5 cut(s) 60, 437, 677, 968, 2896
Aor13HI TCCGGA 1 cut(s) 397
Aor51HI AGCGCT 1 cut(s) 227
AoxI GGCC 8 cut(s) 22, 645, 1042, 1096, 1335, 1694, 1942, 2340
ApaLI GTGCAC 1 cut(s) 473
ApeKI GCWGC 9 cut(s) 44, 47, 129, 414, 1092, 1571, 1925, 2993, 3035
ApoI RAATTY 5 cut(s) 10, 915, 949, 1998, 2921
ArsI GACNNNNNNTTYG 6 cut(s) 581, 613, 1253, 1285, 2230, 2262
Asp700I GAANNNNTTC 3 cut(s) 1187, 1233, 2229
AspLEI GCGC 6 cut(s) 228, 464, 507, 582, 584, 2008
AspS9I GGNCC 5 cut(s) 1194, 1481, 1694, 1781, 2491
AsuC2I CCSGG 2 cut(s) 374, 727
AsuHPI GGTGA 7 cut(s) 811, 820, 839, 1312, 1587, 2435, 3026
AsuII TTCGAA 1 cut(s) 1272
AvaI CYCGRG 5 cut(s) 60, 437, 677, 968, 2896
AvaII GGWCC 4 cut(s) 1194, 1481, 1781, 2491
AxyI CCTNAGG 1 cut(s) 1891
BaeGI GKGCMC 2 cut(s) 477, 1717
BamHI GGATCC 2 cut(s) 2563, 2945
BanI GGYRCC 1 cut(s) 32
BanII GRGCYC 6 cut(s) 159, 612, 834, 1107, 1329, 1861
BarI GAAGNNNNNNTAC 2 cut(s) 2603, 2635
BauI CACGAG 1 cut(s) 1100
BbrPI CACGTG 2 cut(s) 472, 502
BbsI GAAGAC 1 cut(s) 2769
BbvCI CCTCAGC 1 cut(s) 26
BbvI GCAGC 9 cut(s) 31, 34, 141, 401, 1104, 1583, 1912, 3005, 3022
BccI CCATC 8 cut(s) 218, 248, 1042, 1370, 1778, 2525, 2765, 2954
BceAI ACGGC 7 cut(s) 37, 635, 729, 844, 1195, 1322, 1938
BcgI CGANNNNNNTGC 2 cut(s) 1345, 1379
BciT130I CCWGG 3 cut(s) 1291, 2842, 3032
BciVI GTATCC 1 cut(s) 723
BcnI CCSGG 2 cut(s) 374, 727
BcoDI GTCTC 7 cut(s) 1127, 1469, 1723, 2111, 2206, 2313, 3047
BfaI CTAG 3 cut(s) 1437, 1854, 2942
BfmI CTRYAG 3 cut(s) 1815, 2334, 3036
BfoI RGCGCY 1 cut(s) 229
BfuAI ACCTGC 5 cut(s) 624, 811, 1215, 1285, 3029
BfuI GTATCC 1 cut(s) 723
BglII AGATCT 4 cut(s) 570, 1252, 1990, 2863
BlpI GCTNAGC 1 cut(s) 1028
Bme1390I CCNGG 5 cut(s) 374, 727, 1291, 2842, 3032
Bme18I GGWCC 4 cut(s) 1194, 1481, 1781, 2491
BmeRI GACNNNNNGTC 1 cut(s) 2469
BmeT110I CYCGRG 5 cut(s) 60, 437, 677, 968, 2896
BmgT120I GGNCC 5 cut(s) 1194, 1481, 1694, 1781, 2491
BmiI GGNNCC 6 cut(s) 34, 1073, 1195, 2174, 2565, 2947
BmrFI CCNGG 5 cut(s) 374, 727, 1291, 2842, 3032
BmsI GCATC 9 cut(s) 55, 302, 311, 363, 742, 905, 1495, 2714, 2807
BpiI GAAGAC 1 cut(s) 2769
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
BpmI CTGGAG 3 cut(s) 515, 1857, 2751
Bpu10I CCTNAGC 2 cut(s) 26, 2793
Bpu1102I GCTNAGC 1 cut(s) 1028
Bpu14I TTCGAA 1 cut(s) 1272
BpuEI CTTGAG 3 cut(s) 1163, 1470, 2337
BpuMI CCSGG 2 cut(s) 374, 727
Bsa29I ATCGAT 1 cut(s) 1365
BsaAI YACGTR 4 cut(s) 472, 502, 685, 2583
BsaBI GATNNNNATC 1 cut(s) 1251
BsaI GGTCTC 2 cut(s) 1127, 3047
BsaJI CCNNGG 8 cut(s) 978, 1008, 1110, 1211, 1372, 1787, 2840, 3030
BsaWI WCCGGW 1 cut(s) 397
Bsc4I CCNNNNNNNGG 4 cut(s) 1051, 2105, 2419, 2574
Bse118I RCCGGY 2 cut(s) 1696, 2342
Bse1I ACTGG 6 cut(s) 139, 465, 538, 1874, 2579, 2871
Bse21I CCTNAGG 1 cut(s) 1891
Bse3DI GCAATG 4 cut(s) 93, 1002, 1742, 1928
Bse8I GATNNNNATC 1 cut(s) 1251
BseAI TCCGGA 1 cut(s) 397
BseBI CCWGG 3 cut(s) 1291, 2842, 3032
BseCI ATCGAT 1 cut(s) 1365
BseDI CCNNGG 8 cut(s) 978, 1008, 1110, 1211, 1372, 1787, 2840, 3030
BseGI GGATG 9 cut(s) 293, 302, 896, 1053, 1299, 1534, 2025, 2798, 2824
BseJI GATNNNNATC 1 cut(s) 1251
BseLI CCNNNNNNNGG 4 cut(s) 1051, 2105, 2419, 2574
BseMI GCAATG 4 cut(s) 93, 1002, 1742, 1928
BseMII CTCAG 7 cut(s) 40, 590, 770, 862, 1107, 1905, 2093
BseNI ACTGG 6 cut(s) 139, 465, 538, 1874, 2579, 2871
BsePI GCGCGC 1 cut(s) 580
BseRI GAGGAG 9 cut(s) 167, 220, 247, 277, 316, 518, 947, 2088, 2456
BseSI GKGCMC 2 cut(s) 477, 1717
BseXI GCAGC 9 cut(s) 31, 34, 141, 401, 1104, 1583, 1912, 3005, 3022
Bsh1236I CGCG 7 cut(s) 186, 462, 582, 588, 1085, 1789, 2504
Bsh1285I CGRYCG 2 cut(s) 592, 604
BshFI GGCC 8 cut(s) 24, 647, 1044, 1098, 1337, 1696, 1944, 2342
BshNI GGYRCC 1 cut(s) 32
BshVI ATCGAT 1 cut(s) 1365
BsiEI CGRYCG 2 cut(s) 592, 604
BsiHKCI CYCGRG 5 cut(s) 60, 437, 677, 968, 2896
BsiSI CCGG 7 cut(s) 15, 373, 398, 726, 1045, 1697, 2343
BslFI GGGAC 6 cut(s) 58, 550, 732, 1274, 2800, 2823
BslI CCNNNNNNNGG 4 cut(s) 1051, 2105, 2419, 2574
BsmAI GTCTC 7 cut(s) 1127, 1469, 1723, 2111, 2206, 2313, 3047
BsmFI GGGAC 6 cut(s) 58, 550, 732, 1274, 2800, 2823
BsmI GAATGC 2 cut(s) 990, 1280
BsnI GGCC 8 cut(s) 24, 647, 1044, 1098, 1337, 1696, 1944, 2342
Bso31I GGTCTC 2 cut(s) 1127, 3047
BsoBI CYCGRG 5 cut(s) 60, 437, 677, 968, 2896
Bsp119I TTCGAA 1 cut(s) 1272
Bsp13I TCCGGA 1 cut(s) 397
Bsp1407I TGTACA 1 cut(s) 2670
Bsp1720I GCTNAGC 1 cut(s) 1028
Bsp19I CCATGG 1 cut(s) 978
BspANI GGCC 8 cut(s) 24, 647, 1044, 1098, 1337, 1696, 1944, 2342
BspCNI CTCAG 7 cut(s) 39, 589, 769, 861, 1108, 1904, 2094
BspDI ATCGAT 1 cut(s) 1365
BspEI TCCGGA 1 cut(s) 397
BspFNI CGCG 7 cut(s) 186, 462, 582, 588, 1085, 1789, 2504
BspHI TCATGA 3 cut(s) 219, 1329, 2718
BspLI GGNNCC 6 cut(s) 34, 1073, 1195, 2174, 2565, 2947
BspMAI CTGCAG 1 cut(s) 3040
BspMI ACCTGC 5 cut(s) 624, 811, 1215, 1285, 3029
BspPI GGATC 8 cut(s) 130, 1067, 1596, 2356, 2558, 2571, 2940, 2953
BspQI GCTCTTC 3 cut(s) 839, 1962, 2734
BspT104I TTCGAA 1 cut(s) 1272
BspT107I GGYRCC 1 cut(s) 32
BspTNI GGTCTC 2 cut(s) 1127, 3047
BsrBI CCGCTC 1 cut(s) 84
BsrDI GCAATG 4 cut(s) 93, 1002, 1742, 1928
BsrFI RCCGGY 2 cut(s) 1696, 2342
BsrGI TGTACA 1 cut(s) 2670
BsrI ACTGG 6 cut(s) 139, 465, 538, 1874, 2579, 2871
BssAI RCCGGY 2 cut(s) 1696, 2342
BssECI CCNNGG 8 cut(s) 978, 1008, 1110, 1211, 1372, 1787, 2840, 3030
BssHII GCGCGC 1 cut(s) 580
BssSI CACGAG 1 cut(s) 1100
BssT1I CCWWGG 3 cut(s) 978, 1008, 1372
Bst2BI CACGAG 1 cut(s) 1100
Bst2UI CCWGG 3 cut(s) 1291, 2842, 3032
Bst4CI ACNGT 8 cut(s) 112, 557, 814, 1265, 1705, 2122, 2335, 2683
Bst6I CTCTTC 9 cut(s) 83, 602, 701, 839, 1449, 1962, 2109, 2734, 2818
BstAUI TGTACA 1 cut(s) 2670
BstBAI YACGTR 4 cut(s) 472, 502, 685, 2583
BstBI TTCGAA 1 cut(s) 1272
BstDSI CCRYGG 3 cut(s) 978, 1211, 1787
BstF5I GGATG 9 cut(s) 293, 302, 896, 1053, 1299, 1534, 2025, 2798, 2824
BstFNI CGCG 7 cut(s) 186, 462, 582, 588, 1085, 1789, 2504
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 6 cut(s) 228, 464, 507, 582, 584, 2008
BstMAI GTCTC 7 cut(s) 1127, 1469, 1723, 2111, 2206, 2313, 3047
BstMCI CGRYCG 2 cut(s) 592, 604
BstNI CCWGG 3 cut(s) 1291, 2842, 3032
BstNSI RCATGY 4 cut(s) 859, 2012, 2185, 2671
BstSCI CCNGG 5 cut(s) 372, 725, 1289, 2840, 3030
BstSFI CTRYAG 3 cut(s) 1815, 2334, 3036
BstSLI GKGCMC 2 cut(s) 477, 1717
BstSNI TACGTA 2 cut(s) 685, 2583
BstUI CGCG 7 cut(s) 186, 462, 582, 588, 1085, 1789, 2504
BstV1I GCAGC 9 cut(s) 31, 34, 141, 401, 1104, 1583, 1912, 3005, 3022
BstV2I GAAGAC 1 cut(s) 2769
BstX2I RGATCY 9 cut(s) 135, 570, 1252, 1588, 1990, 2348, 2563, 2863, 2945
BstXI CCANNNNNNTGG 1 cut(s) 1639
BstYI RGATCY 9 cut(s) 135, 570, 1252, 1588, 1990, 2348, 2563, 2863, 2945
Bsu15I ATCGAT 1 cut(s) 1365
Bsu36I CCTNAGG 1 cut(s) 1891
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 8 cut(s) 24, 647, 1044, 1098, 1337, 1696, 1944, 2342
BsuTUI ATCGAT 1 cut(s) 1365
BtgI CCRYGG 3 cut(s) 978, 1211, 1787
BtsCI GGATG 9 cut(s) 293, 302, 896, 1053, 1299, 1534, 2025, 2798, 2824
BtsIMutI CAGTG 6 cut(s) 545, 764, 856, 1863, 1881, 2767
BveI ACCTGC 5 cut(s) 624, 811, 1215, 1285, 3029
CaiI CAGNNNCTG 2 cut(s) 1814, 2681
CciI TCATGA 3 cut(s) 219, 1329, 2718
CfoI GCGC 6 cut(s) 228, 464, 507, 582, 584, 2008
Cfr10I RCCGGY 2 cut(s) 1696, 2342
Cfr13I GGNCC 5 cut(s) 1194, 1481, 1694, 1781, 2491
Cfr42I CCGCGG 1 cut(s) 1790
ClaI ATCGAT 1 cut(s) 1365
CseI GACGC 2 cut(s) 647, 1091
Csp6I GTAC 5 cut(s) 382, 682, 686, 1431, 2671
CviQI GTAC 5 cut(s) 382, 682, 686, 1431, 2671
DriI GACNNNNNGTC 1 cut(s) 2469
EaeI YGGCCR 2 cut(s) 645, 1096
Eam1104I CTCTTC 9 cut(s) 83, 602, 701, 839, 1449, 1962, 2109, 2734, 2818
Eam1105I GACNNNNNGTC 1 cut(s) 2469
EarI CTCTTC 9 cut(s) 83, 602, 701, 839, 1449, 1962, 2109, 2734, 2818
EciI GGCGGA 6 cut(s) 28, 149, 190, 298, 433, 662
Ecl136II GAGCTC 6 cut(s) 157, 610, 832, 1105, 1327, 1859
Eco105I TACGTA 2 cut(s) 685, 2583
Eco130I CCWWGG 3 cut(s) 978, 1008, 1372
Eco24I GRGCYC 6 cut(s) 159, 612, 834, 1107, 1329, 1861
Eco31I GGTCTC 2 cut(s) 1127, 3047
Eco47I GGWCC 4 cut(s) 1194, 1481, 1781, 2491
Eco47III AGCGCT 1 cut(s) 227
Eco53kI GAGCTC 6 cut(s) 157, 610, 832, 1105, 1327, 1859
Eco57I CTGAAG 1 cut(s) 2715
Eco72I CACGTG 2 cut(s) 472, 502
Eco81I CCTNAGG 1 cut(s) 1891
Eco88I CYCGRG 5 cut(s) 60, 437, 677, 968, 2896
EcoICRI GAGCTC 6 cut(s) 157, 610, 832, 1105, 1327, 1859
EcoRI GAATTC 4 cut(s) 10, 915, 949, 1998
EcoRII CCWGG 3 cut(s) 1289, 2840, 3030
EcoT14I CCWWGG 3 cut(s) 978, 1008, 1372
EcoT38I GRGCYC 6 cut(s) 159, 612, 834, 1107, 1329, 1861
ErhI CCWWGG 3 cut(s) 978, 1008, 1372
FalI AAGNNNNNCTT 2 cut(s) 1894, 1926
FaqI GGGAC 6 cut(s) 58, 550, 732, 1274, 2800, 2823
FauI CCCGC 8 cut(s) 134, 338, 353, 458, 593, 789, 834, 1842
FauNDI CATATG 1 cut(s) 2219
FblI GTMKAC 2 cut(s) 390, 552
FokI GGATG 9 cut(s) 280, 289, 883, 1060, 1306, 1541, 2032, 2785, 2831
FriOI GRGCYC 6 cut(s) 159, 612, 834, 1107, 1329, 1861
FspAI RTGCGCAY 1 cut(s) 2007
FspBI CTAG 3 cut(s) 1437, 1854, 2942
FspI TGCGCA 1 cut(s) 2007
GlaI GCGC 6 cut(s) 227, 463, 506, 581, 583, 2007
GsuI CTGGAG 3 cut(s) 515, 1857, 2751
HaeII RGCGCY 1 cut(s) 229
HaeIII GGCC 8 cut(s) 24, 647, 1044, 1098, 1337, 1696, 1944, 2342
HapII CCGG 7 cut(s) 15, 373, 398, 726, 1045, 1697, 2343
HgaI GACGC 2 cut(s) 647, 1091
HhaI GCGC 6 cut(s) 228, 464, 507, 582, 584, 2008
Hin6I GCGC 6 cut(s) 226, 462, 505, 580, 582, 2006
HinP1I GCGC 6 cut(s) 226, 462, 505, 580, 582, 2006
HincII GTYRAC 3 cut(s) 391, 553, 1708
HindII GTYRAC 3 cut(s) 391, 553, 1708
HindIII AAGCTT 3 cut(s) 941, 2847, 2876
HpaII CCGG 7 cut(s) 15, 373, 398, 726, 1045, 1697, 2343
HphI GGTGA 7 cut(s) 811, 820, 839, 1312, 1587, 2435, 3026
HpyAV CCTTC 7 cut(s) 142, 1154, 1291, 1327, 2196, 2762, 3036
HpyCH4III ACNGT 8 cut(s) 112, 557, 814, 1265, 1705, 2122, 2335, 2683
HpyCH4IV ACGT 7 cut(s) 456, 471, 501, 684, 768, 1185, 2582
HpySE526I ACGT 7 cut(s) 456, 471, 501, 684, 768, 1185, 2582
HspAI GCGC 6 cut(s) 226, 462, 505, 580, 582, 2006
Kpn2I TCCGGA 1 cut(s) 397
KspI CCGCGG 1 cut(s) 1790
LguI GCTCTTC 3 cut(s) 839, 1962, 2734
Lsp1109I GCAGC 9 cut(s) 31, 34, 141, 401, 1104, 1583, 1912, 3005, 3022
LweI GCATC 9 cut(s) 55, 302, 311, 363, 742, 905, 1495, 2714, 2807
MaeI CTAG 3 cut(s) 1437, 1854, 2942
MaeII ACGT 7 cut(s) 456, 471, 501, 684, 768, 1185, 2582
MaeIII GTNAC 8 cut(s) 467, 808, 851, 1593, 1699, 1804, 1978, 3014
MbiI CCGCTC 1 cut(s) 84
MfeI CAATTG 2 cut(s) 902, 3009
MflI RGATCY 9 cut(s) 135, 570, 1252, 1588, 1990, 2348, 2563, 2863, 2945
MmeI TCCRAC 4 cut(s) 540, 789, 1221, 2274
MroI TCCGGA 1 cut(s) 397
MroXI GAANNNNTTC 3 cut(s) 1187, 1233, 2229
MseI TTAA 7 cut(s) 1347, 1583, 1974, 2127, 2285, 2661, 2936
MslI CAYNNNNRTG 1 cut(s) 983
MspA1I CMGCKG 5 cut(s) 30, 44, 1095, 1789, 2912
MspI CCGG 7 cut(s) 15, 373, 398, 726, 1045, 1697, 2343
MspR9I CCNGG 5 cut(s) 374, 727, 1291, 2842, 3032
MunI CAATTG 2 cut(s) 902, 3009
Mva1269I GAATGC 2 cut(s) 990, 1280
MvaI CCWGG 3 cut(s) 1291, 2842, 3032
MvnI CGCG 7 cut(s) 186, 462, 582, 588, 1085, 1789, 2504
NciI CCSGG 2 cut(s) 374, 727
NcoI CCATGG 1 cut(s) 978
NdeI CATATG 1 cut(s) 2219
NlaIV GGNNCC 6 cut(s) 34, 1073, 1195, 2174, 2565, 2947
NmeAIII GCCGAG 3 cut(s) 94, 124, 1091
NmuCI GTSAC 5 cut(s) 467, 808, 851, 1593, 3014
NsbI TGCGCA 1 cut(s) 2007
NspI RCATGY 4 cut(s) 859, 2012, 2185, 2671
NspV TTCGAA 1 cut(s) 1272
PaeI GCATGC 2 cut(s) 2012, 2185
PaeR7I CTCGAG 3 cut(s) 437, 968, 2896
PagI TCATGA 3 cut(s) 219, 1329, 2718
PaqCI CACCTGC 1 cut(s) 624
PauI GCGCGC 1 cut(s) 580
PciSI GCTCTTC 3 cut(s) 839, 1962, 2734
PcsI WCGNNNNNNNCGW 2 cut(s) 660, 2588
PctI GAATGC 2 cut(s) 990, 1280
PdmI GAANNNNTTC 3 cut(s) 1187, 1233, 2229
PfeI GAWTC 8 cut(s) 206, 363, 802, 1247, 1559, 1868, 2426, 2646
PflMI CCANNNNNTGG 1 cut(s) 2574
PfoI TCCNGGA 1 cut(s) 725
Ple19I CGATCG 1 cut(s) 604
PmaCI CACGTG 2 cut(s) 472, 502
PmlI CACGTG 2 cut(s) 472, 502
Ppu21I YACGTR 4 cut(s) 472, 502, 685, 2583
Psp124BI GAGCTC 6 cut(s) 159, 612, 834, 1107, 1329, 1861
Psp6I CCWGG 3 cut(s) 1289, 2840, 3030
PspCI CACGTG 2 cut(s) 472, 502
PspGI CCWGG 3 cut(s) 1289, 2840, 3030
PspN4I GGNNCC 6 cut(s) 34, 1073, 1195, 2174, 2565, 2947
PspPI GGNCC 5 cut(s) 1194, 1481, 1694, 1781, 2491
PspXI VCTCGAGB 2 cut(s) 968, 2896
PstI CTGCAG 1 cut(s) 3040
PstNI CAGNNNCTG 2 cut(s) 1814, 2681
PsuI RGATCY 9 cut(s) 135, 570, 1252, 1588, 1990, 2348, 2563, 2863, 2945
PteI GCGCGC 1 cut(s) 580
PvuI CGATCG 1 cut(s) 604
RsaI GTAC 5 cut(s) 383, 683, 687, 1432, 2672
RsaNI GTAC 5 cut(s) 382, 682, 686, 1431, 2671
RseI CAYNNNNRTG 1 cut(s) 983
SacI GAGCTC 6 cut(s) 159, 612, 834, 1107, 1329, 1861
SacII CCGCGG 1 cut(s) 1790
SalI GTCGAC 2 cut(s) 389, 551
SapI GCTCTTC 3 cut(s) 839, 1962, 2734
SaqAI TTAA 7 cut(s) 1347, 1583, 1974, 2127, 2285, 2661, 2936
Sau96I GGNCC 5 cut(s) 1194, 1481, 1694, 1781, 2491
ScrFI CCNGG 5 cut(s) 374, 727, 1291, 2842, 3032
SfaNI GCATC 9 cut(s) 55, 302, 311, 363, 742, 905, 1495, 2714, 2807
SfcI CTRYAG 3 cut(s) 1815, 2334, 3036
Sfr274I CTCGAG 3 cut(s) 437, 968, 2896
Sfr303I CCGCGG 1 cut(s) 1790
SfuI TTCGAA 1 cut(s) 1272
SgrBI CCGCGG 1 cut(s) 1790
SinI GGWCC 4 cut(s) 1194, 1481, 1781, 2491
SlaI CTCGAG 3 cut(s) 437, 968, 2896
SmiMI CAYNNNNRTG 1 cut(s) 983
SmlI CTYRAG 6 cut(s) 437, 968, 1178, 1485, 2352, 2896
SmoI CTYRAG 6 cut(s) 437, 968, 1178, 1485, 2352, 2896
SnaBI TACGTA 2 cut(s) 685, 2583
SphI GCATGC 2 cut(s) 2012, 2185
SspMI CTAG 3 cut(s) 1437, 1854, 2942
SstI GAGCTC 6 cut(s) 159, 612, 834, 1107, 1329, 1861
StyD4I CCNGG 5 cut(s) 372, 725, 1289, 2840, 3030
StyI CCWWGG 3 cut(s) 978, 1008, 1372
TaaI ACNGT 8 cut(s) 112, 557, 814, 1265, 1705, 2122, 2335, 2683
TaiI ACGT 7 cut(s) 459, 474, 504, 687, 771, 1188, 2585
TatI WGTACW 1 cut(s) 2670
TauI GCSGC 8 cut(s) 44, 53, 56, 449, 650, 1098, 2912, 2999
TfiI GAWTC 8 cut(s) 206, 363, 802, 1247, 1559, 1868, 2426, 2646
Tru1I TTAA 7 cut(s) 1347, 1583, 1974, 2127, 2285, 2661, 2936
Tru9I TTAA 7 cut(s) 1347, 1583, 1974, 2127, 2285, 2661, 2936
TscAI CASTG 6 cut(s) 545, 764, 856, 1870, 1881, 2767
TseFI GTSAC 5 cut(s) 467, 808, 851, 1593, 3014
TseI GCWGC 9 cut(s) 44, 47, 129, 414, 1092, 1571, 1925, 2993, 3035
Tsp45I GTSAC 5 cut(s) 467, 808, 851, 1593, 3014
TspDTI ATGAA 7 cut(s) 236, 1154, 1310, 1346, 1711, 1902, 2222
TspGWI ACGGA 3 cut(s) 250, 375, 2497
TspRI CASTG 6 cut(s) 545, 764, 856, 1870, 1881, 2767
Van91I CCANNNNNTGG 1 cut(s) 2574
VneI GTGCAC 1 cut(s) 473
VpaK11BI GGWCC 4 cut(s) 1194, 1481, 1781, 2491
XapI RAATTY 5 cut(s) 10, 915, 949, 1998, 2921
XbaI TCTAGA 1 cut(s) 1853
XceI RCATGY 4 cut(s) 859, 2012, 2185, 2671
XcmI CCANNNNNNNNNTGG 2 cut(s) 908, 985
XhoI CTCGAG 3 cut(s) 437, 968, 2896
XmiI GTMKAC 2 cut(s) 390, 552
XmnI GAANNNNTTC 3 cut(s) 1187, 1233, 2229
XspI CTAG 3 cut(s) 1437, 1854, 2942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.