Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005295

Physical Location & Seq

Genomic Coordinates Reverse (-)

46834961 .. 46843621

Gene Structure 8661 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G575000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3120 bp

ATGAGAGTGAGCTCCGGCGATGGCCTCAGTGGCGGCGCCACCTCCGCCGCCTCCGCCACTGCCGCCGCGGCTTCCAGGGACGCCGAGGCCCTCTTCCGCTCCAAACCCATCTCCGAGATCCGAACCGTCGAGTCCACCACCCGAACCCAGATCCAATCCAAGATGGAGGAGCTCCGCCAGCTCGTCGGCACCCGCTACCGCGATCTCATCGACTCCGCCGACTCCATCGTCCTCATGAAGCGCTCCTCCCACTCCATCTCCCTCAACATCTCCTCCGTCCACGCCTCCATCGATTCCCTTTCCTCCTCCGCCTCCACCCCCGACCTGCCCGACCCCTCCCGCCACGACCCGACCCGCCACCGCATCTACGGCATTGCCTGCCGGGTCAAGTACCTCGTCGACACCCCTGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTCCTCGAGTCTGCCGCGCGCTACTCCCGCGCCAGTCACGTGCACTCCATCCTCACGCTCCCCGGTCACGTGCGTTTCCTCTCCAACTTCCCTCTGCTCCAGCACCAGTGGCAGATCGTCGACAGCTTCAAGTCTCAGATCTCTCAGCGCGCCCGCGACCGCCTCTTCGATCGGGAGCTCCAGCTGCCCATCTCCTCCTACGCCGACGCATTGGCAGCCGTTGCTCTGATCGACGACCTCCGCCCCGAGCACGTCCTCTCGCTCTTCCTCGAGACTCGGAAGTCGTGGGTCTCGCAGATACTCAACGCCTGCGGTGTCGATGCGCAGTGCTCCGACGTCGTTTCGGTGCTGTGCGAGGCCTTGAGGGTGATTCAAGTGACTGTGGGGCAGGTTGGGGAGCTCTTCTTGCGGGTGTTTAACGACATGCCGTTGTTTTACAAAGTGGTTTTGGGTTCCCCACCTGCATCTCAACTGTTTGGTGGAATTCCCAACCCGGATGAGGAGGTCAAGCTTTGGAACTCGTTCAGGGAGAAGCTGGAGGCCGCCATGGGAATGCTGGAGAAGGATTATATTGCCAAGGCTTGTCGCTCGTGGCTCAAGGACTGTGGAGGCCAGATGGTGGATAAGATCAATGGGAGGTTTCTCATTGATGCCATTGGCAGCGGCCATGAGCTCGCCTCAGCTGAGAAGTTGATTAGGGAGACTATGAATAGCAAAGAGGTATTAGAAGGGAGCTTGGAGTGGCTCAAGAATGTTTTCGGGTCCAACATTGACCTGCCTTGGAGTAGAATGAGTGAACTTGTTCTGGGAGACGATTCGGACCTATGGGACAGTATCTTTGAACCAGCATTTGTCGGGAGGATGAAGGTGATTGTGGACCGCAGGTTTGAGGAGCTCACGAGGGCCGTGAACGTTAAGGAGGGTGAACCCATTGATTTTCTTGGTGCTGGTGGTGGAATTTGGTTTGTAGAAGCCAAATCCAAGCATGGTAAAAAGGGTACTTCTGCTCTGCCTTGTGAAGAGAATTGTCTCAATTTCTATTTTGGTCCTCAAGCTAGTGGTATTAGGGATGCTGTGGATGGTAGCTGTCAGGGGGTTCTTGATGACTTACTGTGTTTCTTAGAATCTCCAAAGGCAGCCCTTAGATTAAAGGATCTGGCACCCTATCTACAAGATAAATGTTACCAAACCATATCTGTTATATTGATGCAACTGAATAGTGAGCTTGGGAATTTGGAAAGTGGCAAAGACAAGCAAGGGCTGGTAACCGTTGAGAGGGCACTTTTCATTGGGAGACTCTTGTTTGCATTGCAGAACCACTCCAAACACATTCCCATCATACTTGGCCCTCCAAGGTCTTGGGCAAATGCAACTGGGTCTGCAGTTTTCGATAAGTTACCATCCATGTTGAGACAATCTAGAGCCCCCACTGATTCTCCCGTGCTTGATAGCCCCTTGGGTTCTAAAAGGCACACTTCATCTGCTACTGCTGCATTGCTTGGAGCAAGCCAAAGTGCAAGCCCTAAACTTGAAGAACTTAATGTAACTATGCGAGATCTCCGCATTAGAGCGCATGGTTTGTGGATGTCATGGTTGTCCGATGAGCTTTCAGTTATTCTTTCTGATGATCTTGAAAAAGATTATGCTTTGTCATCATCAAGTCCTCTGAGGGGTTGGGAAGAGACAGTAGTTAAGCAAGAGCAGTCTGATGATAACCAATCAGACCTGAGAATTTGGCTCCCATGCATGCCTTCCCTCTATGTAACCTCGTTTCTCTTCCGTGTATGCAAAGAAGTTCATCGAATTGGAGGTCATGTTCTTGACAAAACAATTCTGCAAAAGTTTGCATCAAAGTTGTTGGAAAAGGTCATTGATATTTATGGGGACTTCCTTTCTACTCTAGAGGCTGGTGGAACTGAAGTGTCCGAAAAAGGAGTTTTGCAAGTTTTGTTAGATTTGAGATTTGTTGTTGATGTTCTTTCTGGGGGTGATTCCAATGTGAGTGAGGAGCCATCTATAAACCTAAAGGCAAAAAGTCCTTTCAGACGGAAGCAGGAACAAAGCCACGTGAAGTCTGTCATTAGAGAGCGTTTTGATGGGTTGATAAATCGCCTTTCACAAAGATTGGATCCCATAGATTGGCTTACGTATGAGCCATATCTCTGGGAAAATGAGAGGCAATCATACCTACGGCATGCTGTCCTTTTCGGATTCTTTGTGCAACTTAATCGCATGTATACAGATACTGTTCAAAAACTTCCTACTAATTCCGAGTCCAATATAATGAGATGCTCTTCAGTTCCTCGCTTCAAGTACCTTCCCATCAGTGCCCCAGCATTGTCTTCAAGAGGGACAGCTAAGACGTCCATTCCAACATCTTCAGATGATATTTCTTCGAGAAGTACCTGGAAATCTTATGCAAATGGAGACCTGTCCAGTAAGCTTGATTTGGATGATAACTCGAGTTTTGGGGTTGCAGTACCAATTTTTAAATCTTTCATGCAGGCTAGAAGCATATTTGGAGAGAGCACATTGAAACTGGGATCAATGCTAACAGATGGGCAAGTGGGCATATTGAAGGATAGATCAGCAGCCGCCATGTCGACATTTGGTGACATTCTACCTGCCCAGGCTGCAGGTCTCCTCTCATCGTTCACAACTTCCAGATCAGACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps51

Protein Analysis

1040

Amino Acids

114.97

Weight (kDa)

5.97

Isoelectric Point (pI)

48.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16300 AT5G16300 AT5G16300 AT5G16300
fragaria_vesca	FvH4_3g34230 FvH4_5g28760 FvH4_5g28760 FvH4_5g28760 FvH4_5g28760
malus_domestica	MD08G1237500.v1.1 MD15G1429400.v1.1
prunus_persica	Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1
pyrus_communis	pycom08g20610 pycom15g38000
rosa_chinensis	RchiOBHm_Chr7g0220971
rosa_laevigata	RLG00000002190
rosa_multiflora	Rmu_sc0002105.1_g000025
rosa_roxburghii	Rroxscaffold_3G00238840
rosa_rugosa	Rorug07G0198700 Rorug07G0198800
rosa_samantha	Rh7AG338900 Rh7BG329700 Rh7CG357000 Rh7DG337700
rosa_wichuraiana	Rw7G028830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	910
AasI	GACNNNNNNGTC	2 cut(s)	227, 721
AatII	GACGTC	2 cut(s)	780, 2807
Acc16I	TGCGCA	1 cut(s)	765
Acc36I	ACCTGC	7 cut(s)	333, 820, 910, 1224, 1314, 3068, 3073
AccB1I	GGYRCC	3 cut(s)	35, 188, 1600
AccB7I	CCANNNNNTGG	2 cut(s)	1060, 2580
AccBSI	CCGCTC	1 cut(s)	99
AccI	GTMKAC	4 cut(s)	399, 561, 2678, 3044
AccII	CGCG	7 cut(s)	68, 201, 458, 460, 471, 591, 597
AclI	AACGTT	1 cut(s)	1353
AclWI	GGATC	6 cut(s)	112, 145, 1602, 2564, 2577, 2992
AcoI	YGGCCR	1 cut(s)	1105
AcsI	RAATTY	4 cut(s)	924, 1398, 1672, 2172
AcuI	CTGAAG	3 cut(s)	2379, 2721, 2805
AcvI	CACGTG	3 cut(s)	481, 511, 2509
AcyI	GRCGYC	4 cut(s)	36, 81, 777, 2804
AfaI	GTAC	5 cut(s)	392, 1441, 2756, 2845, 2922
AfeI	AGCGCT	1 cut(s)	242
AfiI	CCNNNNNNNGG	5 cut(s)	940, 1060, 1716, 2111, 2580
AjiI	CACGTC	1 cut(s)	694
AjnI	CCWGG	3 cut(s)	74, 2846, 3069
AloI	GAACNNNNNNTCC	2 cut(s)	2241, 2273
Alw44I	GTGCAC	1 cut(s)	482
AlwI	GGATC	6 cut(s)	112, 145, 1602, 2564, 2577, 2992
AlwNI	CAGNNNCTG	1 cut(s)	2687
Ama87I	CYCGRG	4 cut(s)	446, 686, 710, 2902
Aor51HI	AGCGCT	1 cut(s)	242
AoxI	GGCC	8 cut(s)	22, 87, 798, 981, 1051, 1105, 1344, 1786
ApaLI	GTGCAC	1 cut(s)	482
ApeKI	GCWGC	8 cut(s)	423, 625, 656, 1101, 1577, 1931, 3032, 3074
ApoI	RAATTY	4 cut(s)	924, 1398, 1672, 2172
ArsI	GACNNNNNNTTYG	8 cut(s)	590, 622, 1262, 1294, 1310, 1342, 2236, 2268
Asp700I	GAANNNNTTC	3 cut(s)	962, 1196, 1242
AspLEI	GCGC	9 cut(s)	38, 243, 460, 462, 473, 591, 593, 766, 2014
AspS9I	GGNCC	7 cut(s)	88, 1203, 1261, 1318, 1344, 1487, 1787
AsuC2I	CCSGG	3 cut(s)	383, 504, 935
AsuHPI	GGTGA	5 cut(s)	820, 1321, 1376, 2441, 3065
AvaI	CYCGRG	4 cut(s)	446, 686, 710, 2902
AvaII	GGWCC	4 cut(s)	1203, 1261, 1318, 1487
BaeGI	GKGCMC	3 cut(s)	486, 1723, 2773
BamHI	GGATCC	1 cut(s)	2569
BanI	GGYRCC	3 cut(s)	35, 188, 1600
BanII	GRGCYC	7 cut(s)	14, 174, 621, 843, 1116, 1338, 1867
BauI	CACGAG	2 cut(s)	1030, 1339
BbrPI	CACGTG	3 cut(s)	481, 511, 2509
BbsI	GAAGAC	1 cut(s)	2775
BbvCI	CCTCAGC	1 cut(s)	1120
BbvI	GCAGC	8 cut(s)	410, 612, 668, 1113, 1589, 1918, 3044, 3061
BceAI	ACGGC	5 cut(s)	385, 644, 853, 1331, 2648
BcgI	CGANNNNNNTGC	2 cut(s)	2651, 2685
BciT130I	CCWGG	3 cut(s)	76, 2848, 3071
BcnI	CCSGG	3 cut(s)	383, 504, 935
BfaI	CTAG	4 cut(s)	1497, 1860, 2342, 2949
BfmI	CTRYAG	2 cut(s)	1821, 3075
BfoI	RGCGCY	2 cut(s)	39, 244
BfuAI	ACCTGC	7 cut(s)	333, 820, 910, 1224, 1314, 3068, 3073
BglI	GCCNNNNNGGC	2 cut(s)	30, 68
BglII	AGATCT	2 cut(s)	579, 1996
Bme1390I	CCNGG	6 cut(s)	76, 383, 504, 935, 2848, 3071
Bme18I	GGWCC	4 cut(s)	1203, 1261, 1318, 1487
BmeT110I	CYCGRG	4 cut(s)	446, 686, 710, 2902
BmgBI	CACGTC	1 cut(s)	694
BmgT120I	GGNCC	7 cut(s)	88, 1203, 1261, 1318, 1344, 1487, 1787
BmiI	GGNNCC	8 cut(s)	37, 190, 895, 1204, 1602, 2180, 2451, 2571
BmrFI	CCNGG	6 cut(s)	76, 383, 504, 935, 2848, 3071
BmrI	ACTGGG	2 cut(s)	1824, 2990
BmsI	GCATC	8 cut(s)	372, 751, 914, 1081, 1501, 1638, 2297, 2720
BmuI	ACTGGG	2 cut(s)	1824, 2990
BpiI	GAAGAC	1 cut(s)	2775
BplI	GAGNNNNNCTC	2 cut(s)	1103, 1135
BpmI	CTGGAG	4 cut(s)	524, 605, 998, 1019
Bpu10I	CCTNAGC	1 cut(s)	1120
BpuEI	CTTGAG	4 cut(s)	823, 1022, 1172, 1476
BpuMI	CCSGG	3 cut(s)	383, 504, 935
Bsa29I	ATCGAT	1 cut(s)	291
BsaAI	YACGTR	4 cut(s)	481, 511, 2509, 2589
BsaHI	GRCGYC	4 cut(s)	36, 81, 777, 2804
BsaI	GGTCTC	3 cut(s)	736, 2862, 3086
Bsc4I	CCNNNNNNNGG	5 cut(s)	940, 1060, 1716, 2111, 2580
Bse1I	ACTGG	5 cut(s)	474, 547, 1819, 2877, 2985
Bse3DI	GCAATG	3 cut(s)	372, 1748, 1934
BseBI	CCWGG	3 cut(s)	76, 2848, 3071
BseCI	ATCGAT	1 cut(s)	291
BseGI	GGATG	8 cut(s)	489, 943, 1308, 1516, 1525, 1841, 2031, 2899
BseLI	CCNNNNNNNGG	5 cut(s)	940, 1060, 1716, 2111, 2580
BseMI	GCAATG	3 cut(s)	372, 1748, 1934
BseMII	CTCAG	8 cut(s)	40, 399, 590, 599, 1116, 1134, 2099, 2159
BseNI	ACTGG	5 cut(s)	474, 547, 1819, 2877, 2985
BsePI	GCGCGC	2 cut(s)	458, 589
BseRI	GAGGAG	9 cut(s)	182, 235, 262, 295, 625, 956, 1346, 2462, 3074
BseSI	GKGCMC	3 cut(s)	486, 1723, 2773
BseXI	GCAGC	8 cut(s)	410, 612, 668, 1113, 1589, 1918, 3044, 3061
BseYI	CCCAGC	1 cut(s)	2773
Bsh1236I	CGCG	7 cut(s)	68, 201, 458, 460, 471, 591, 597
Bsh1285I	CGRYCG	2 cut(s)	601, 613
BshFI	GGCC	8 cut(s)	24, 89, 800, 983, 1053, 1107, 1346, 1788
BshNI	GGYRCC	3 cut(s)	35, 188, 1600
BshVI	ATCGAT	1 cut(s)	291
BsiEI	CGRYCG	2 cut(s)	601, 613
BsiHKCI	CYCGRG	4 cut(s)	446, 686, 710, 2902
BsiSI	CCGG	4 cut(s)	15, 382, 504, 935
BslFI	GGGAC	4 cut(s)	92, 1283, 2339, 2806
BslI	CCNNNNNNNGG	5 cut(s)	940, 1060, 1716, 2111, 2580
BsmBI	CGTCTC	1 cut(s)	1245
BsmFI	GGGAC	4 cut(s)	92, 1283, 2339, 2806
BsmI	GAATGC	1 cut(s)	999
BsnI	GGCC	8 cut(s)	24, 89, 800, 983, 1053, 1107, 1346, 1788
Bso31I	GGTCTC	3 cut(s)	736, 2862, 3086
BsoBI	CYCGRG	4 cut(s)	446, 686, 710, 2902
Bsp19I	CCATGG	1 cut(s)	987
BspANI	GGCC	8 cut(s)	24, 89, 800, 983, 1053, 1107, 1346, 1788
BspCNI	CTCAG	8 cut(s)	39, 400, 589, 598, 1117, 1133, 2100, 2160
BspDI	ATCGAT	1 cut(s)	291
BspFNI	CGCG	7 cut(s)	68, 201, 458, 460, 471, 591, 597
BspHI	TCATGA	1 cut(s)	234
BspLI	GGNNCC	8 cut(s)	37, 190, 895, 1204, 1602, 2180, 2451, 2571
BspMAI	CTGCAG	2 cut(s)	1825, 3079
BspMI	ACCTGC	7 cut(s)	333, 820, 910, 1224, 1314, 3068, 3073
BspPI	GGATC	6 cut(s)	112, 145, 1602, 2564, 2577, 2992
BspQI	GCTCTTC	3 cut(s)	710, 848, 2740
BspT107I	GGYRCC	3 cut(s)	35, 188, 1600
BspTNI	GGTCTC	3 cut(s)	736, 2862, 3086
BsrBI	CCGCTC	1 cut(s)	99
BsrDI	GCAATG	3 cut(s)	372, 1748, 1934
BsrI	ACTGG	5 cut(s)	474, 547, 1819, 2877, 2985
BssHII	GCGCGC	2 cut(s)	458, 589
BssNAI	GTATAC	1 cut(s)	2679
BssNI	GRCGYC	4 cut(s)	36, 81, 777, 2804
BssSI	CACGAG	2 cut(s)	1030, 1339
BssT1I	CCWWGG	5 cut(s)	987, 1017, 1220, 1793, 1896
Bst1107I	GTATAC	1 cut(s)	2679
Bst2BI	CACGAG	2 cut(s)	1030, 1339
Bst2UI	CCWGG	3 cut(s)	76, 2848, 3071
Bst4CI	ACNGT	9 cut(s)	127, 823, 915, 1046, 1274, 1554, 1711, 2128, 2689
Bst6I	CTCTTC	8 cut(s)	98, 611, 710, 848, 1455, 2115, 2222, 2740
BstACI	GRCGYC	4 cut(s)	36, 81, 777, 2804
BstAPI	GCANNNNNTGC	2 cut(s)	378, 662
BstBAI	YACGTR	4 cut(s)	481, 511, 2509, 2589
BstDSI	CCRYGG	2 cut(s)	66, 987
BstEII	GGTNACC	1 cut(s)	1705
BstF5I	GGATG	8 cut(s)	489, 943, 1308, 1516, 1525, 1841, 2031, 2899
BstFNI	CGCG	7 cut(s)	68, 201, 458, 460, 471, 591, 597
BstH2I	RGCGCY	2 cut(s)	39, 244
BstHHI	GCGC	9 cut(s)	38, 243, 460, 462, 473, 591, 593, 766, 2014
BstMCI	CGRYCG	2 cut(s)	601, 613
BstNI	CCWGG	3 cut(s)	76, 2848, 3071
BstNSI	RCATGY	4 cut(s)	868, 2191, 2639, 2677
BstPI	GGTNACC	1 cut(s)	1705
BstSCI	CCNGG	6 cut(s)	74, 381, 502, 933, 2846, 3069
BstSFI	CTRYAG	2 cut(s)	1821, 3075
BstSLI	GKGCMC	3 cut(s)	486, 1723, 2773
BstSNI	TACGTA	1 cut(s)	2589
BstUI	CGCG	7 cut(s)	68, 201, 458, 460, 471, 591, 597
BstV1I	GCAGC	8 cut(s)	410, 612, 668, 1113, 1589, 1918, 3044, 3061
BstV2I	GAAGAC	1 cut(s)	2775
BstX2I	RGATCY	6 cut(s)	117, 150, 579, 1594, 1996, 2569
BstXI	CCANNNNNNTGG	2 cut(s)	1800, 2604
BstYI	RGATCY	6 cut(s)	117, 150, 579, 1594, 1996, 2569
BstZ17I	GTATAC	1 cut(s)	2679
Bsu15I	ATCGAT	1 cut(s)	291
BsuRI	GGCC	8 cut(s)	24, 89, 800, 983, 1053, 1107, 1346, 1788
BsuTUI	ATCGAT	1 cut(s)	291
BtgI	CCRYGG	2 cut(s)	66, 987
BtgZI	GCGATG	1 cut(s)	33
BtrI	CACGTC	1 cut(s)	694
BtsCI	GGATG	8 cut(s)	489, 943, 1308, 1516, 1525, 1841, 2031, 2899
BtsI	GCAGTG	2 cut(s)	57, 773
BtsIMutI	CAGTG	6 cut(s)	34, 57, 554, 773, 1869, 2773
BveI	ACCTGC	7 cut(s)	333, 820, 910, 1224, 1314, 3068, 3073
CaiI	CAGNNNCTG	1 cut(s)	2687
CciI	TCATGA	1 cut(s)	234
CfoI	GCGC	9 cut(s)	38, 243, 460, 462, 473, 591, 593, 766, 2014
Cfr13I	GGNCC	7 cut(s)	88, 1203, 1261, 1318, 1344, 1487, 1787
Cfr42I	CCGCGG	1 cut(s)	69
ClaI	ATCGAT	1 cut(s)	291
CseI	GACGC	2 cut(s)	89, 656
Csp6I	GTAC	5 cut(s)	391, 1440, 2755, 2844, 2921
CspCI	CAANNNNNGTGG	2 cut(s)	1027, 1062
CviQI	GTAC	5 cut(s)	391, 1440, 2755, 2844, 2921
DinI	GGCGCC	1 cut(s)	37
DraI	TTTAAA	1 cut(s)	2932
DrdI	GACNNNNNNGTC	2 cut(s)	227, 721
DseDI	GACNNNNNNGTC	2 cut(s)	227, 721
EaeI	YGGCCR	1 cut(s)	1105
Eam1104I	CTCTTC	8 cut(s)	98, 611, 710, 848, 1455, 2115, 2222, 2740
EarI	CTCTTC	8 cut(s)	98, 611, 710, 848, 1455, 2115, 2222, 2740
EciI	GGCGGA	6 cut(s)	34, 43, 164, 205, 298, 671
Ecl136II	GAGCTC	6 cut(s)	12, 172, 619, 841, 1114, 1336
Eco105I	TACGTA	1 cut(s)	2589
Eco130I	CCWWGG	5 cut(s)	987, 1017, 1220, 1793, 1896
Eco147I	AGGCCT	1 cut(s)	800
Eco24I	GRGCYC	7 cut(s)	14, 174, 621, 843, 1116, 1338, 1867
Eco31I	GGTCTC	3 cut(s)	736, 2862, 3086
Eco47I	GGWCC	4 cut(s)	1203, 1261, 1318, 1487
Eco47III	AGCGCT	1 cut(s)	242
Eco53kI	GAGCTC	6 cut(s)	12, 172, 619, 841, 1114, 1336
Eco57I	CTGAAG	3 cut(s)	2379, 2721, 2805
Eco72I	CACGTG	3 cut(s)	481, 511, 2509
Eco88I	CYCGRG	4 cut(s)	446, 686, 710, 2902
Eco91I	GGTNACC	1 cut(s)	1705
EcoICRI	GAGCTC	6 cut(s)	12, 172, 619, 841, 1114, 1336
EcoO109I	RGGNCCY	1 cut(s)	88
EcoO65I	GGTNACC	1 cut(s)	1705
EcoRI	GAATTC	1 cut(s)	924
EcoRII	CCWGG	3 cut(s)	74, 2846, 3069
EcoT14I	CCWWGG	5 cut(s)	987, 1017, 1220, 1793, 1896
EcoT22I	ATGCAT	1 cut(s)	2189
EcoT38I	GRGCYC	7 cut(s)	14, 174, 621, 843, 1116, 1338, 1867
EgeI	GGCGCC	1 cut(s)	37
EheI	GGCGCC	1 cut(s)	37
ErhI	CCWWGG	5 cut(s)	987, 1017, 1220, 1793, 1896
Esp3I	CGTCTC	1 cut(s)	1245
FalI	AAGNNNNNCTT	2 cut(s)	1900, 1932
FaqI	GGGAC	4 cut(s)	92, 1283, 2339, 2806
FauI	CCCGC	6 cut(s)	200, 347, 362, 476, 602, 843
FblI	GTMKAC	4 cut(s)	399, 561, 2678, 3044
FokI	GGATG	8 cut(s)	476, 950, 1315, 1523, 1532, 1828, 2038, 2906
FriOI	GRGCYC	7 cut(s)	14, 174, 621, 843, 1116, 1338, 1867
FspBI	CTAG	4 cut(s)	1497, 1860, 2342, 2949
FspI	TGCGCA	1 cut(s)	765
GlaI	GCGC	9 cut(s)	37, 242, 459, 461, 472, 590, 592, 765, 2013
GsaI	CCCAGC	1 cut(s)	2777
GsuI	CTGGAG	4 cut(s)	524, 605, 998, 1019
HaeII	RGCGCY	2 cut(s)	39, 244
HaeIII	GGCC	8 cut(s)	24, 89, 800, 983, 1053, 1107, 1346, 1788
HapII	CCGG	4 cut(s)	15, 382, 504, 935
HgaI	GACGC	2 cut(s)	89, 656
HhaI	GCGC	9 cut(s)	38, 243, 460, 462, 473, 591, 593, 766, 2014
Hin1I	GRCGYC	4 cut(s)	36, 81, 777, 2804
Hin6I	GCGC	9 cut(s)	36, 241, 458, 460, 471, 589, 591, 764, 2012
HinP1I	GCGC	9 cut(s)	36, 241, 458, 460, 471, 589, 591, 764, 2012
HincII	GTYRAC	3 cut(s)	400, 562, 3045
HindII	GTYRAC	3 cut(s)	400, 562, 3045
HindIII	AAGCTT	2 cut(s)	950, 2882
HpaII	CCGG	4 cut(s)	15, 382, 504, 935
HphI	GGTGA	5 cut(s)	820, 1321, 1376, 2441, 3065
Hpy99I	CGWCG	9 cut(s)	131, 188, 401, 434, 563, 650, 677, 779, 782
HpyAV	CCTTC	6 cut(s)	997, 1163, 1300, 2202, 2768, 3013
HpyCH4III	ACNGT	9 cut(s)	127, 823, 915, 1046, 1274, 1554, 1711, 2128, 2689
HpyCH4IV	ACGT	8 cut(s)	480, 510, 693, 777, 1353, 2508, 2588, 2804
HpySE526I	ACGT	8 cut(s)	480, 510, 693, 777, 1353, 2508, 2588, 2804
Hsp92I	GRCGYC	4 cut(s)	36, 81, 777, 2804
HspAI	GCGC	9 cut(s)	36, 241, 458, 460, 471, 589, 591, 764, 2012
KasI	GGCGCC	1 cut(s)	35
KspI	CCGCGG	1 cut(s)	69
LguI	GCTCTTC	3 cut(s)	710, 848, 2740
Lsp1109I	GCAGC	8 cut(s)	410, 612, 668, 1113, 1589, 1918, 3044, 3061
LweI	GCATC	8 cut(s)	372, 751, 914, 1081, 1501, 1638, 2297, 2720
MaeI	CTAG	4 cut(s)	1497, 1860, 2342, 2949
MaeII	ACGT	8 cut(s)	480, 510, 693, 777, 1353, 2508, 2588, 2804
MaeIII	GTNAC	9 cut(s)	476, 506, 817, 1622, 1705, 1836, 1984, 2203, 3053
MbiI	CCGCTC	1 cut(s)	99
MflI	RGATCY	6 cut(s)	117, 150, 579, 1594, 1996, 2569
Mly113I	GGCGCC	1 cut(s)	36
MlyI	GAGTC	9 cut(s)	140, 206, 215, 443, 458, 709, 1731, 2723, 3107
MmeI	TCCRAC	5 cut(s)	549, 798, 1230, 2280, 2837
Mph1103I	ATGCAT	1 cut(s)	2189
MroXI	GAANNNNTTC	3 cut(s)	962, 1196, 1242
MseI	TTAA	7 cut(s)	858, 1356, 1589, 1980, 2133, 2667, 2931
MslI	CAYNNNNRTG	1 cut(s)	992
MspA1I	CMGCKG	4 cut(s)	68, 625, 1104, 1124
MspI	CCGG	4 cut(s)	15, 382, 504, 935
MspR9I	CCNGG	6 cut(s)	76, 383, 504, 935, 2848, 3071
Mva1269I	GAATGC	1 cut(s)	999
MvaI	CCWGG	3 cut(s)	76, 2848, 3071
MvnI	CGCG	7 cut(s)	68, 201, 458, 460, 471, 591, 597
NarI	GGCGCC	1 cut(s)	36
NciI	CCSGG	3 cut(s)	383, 504, 935
NcoI	CCATGG	1 cut(s)	987
NlaIV	GGNNCC	8 cut(s)	37, 190, 895, 1204, 1602, 2180, 2451, 2571
NmeAIII	GCCGAG	1 cut(s)	109
NmuCI	GTSAC	4 cut(s)	476, 506, 817, 3053
NsbI	TGCGCA	1 cut(s)	765
NsiI	ATGCAT	1 cut(s)	2189
NspI	RCATGY	4 cut(s)	868, 2191, 2639, 2677
PaeI	GCATGC	2 cut(s)	2191, 2639
PaeR7I	CTCGAG	3 cut(s)	446, 710, 2902
PagI	TCATGA	1 cut(s)	234
PaqCI	CACCTGC	1 cut(s)	910
PauI	GCGCGC	2 cut(s)	458, 589
PceI	AGGCCT	1 cut(s)	800
PciSI	GCTCTTC	3 cut(s)	710, 848, 2740
PcsI	WCGNNNNNNNCGW	2 cut(s)	216, 288
PctI	GAATGC	1 cut(s)	999
PdmI	GAANNNNTTC	3 cut(s)	962, 1196, 1242
PfeI	GAWTC	7 cut(s)	293, 811, 1256, 1565, 1874, 2432, 2652
PflMI	CCANNNNNTGG	2 cut(s)	1060, 2580
Ple19I	CGATCG	1 cut(s)	613
PleI	GAGTC	9 cut(s)	139, 206, 215, 442, 457, 709, 1731, 2722, 3107
PluTI	GGCGCC	1 cut(s)	39
PmaCI	CACGTG	3 cut(s)	481, 511, 2509
PmlI	CACGTG	3 cut(s)	481, 511, 2509
PpsI	GAGTC	9 cut(s)	139, 206, 215, 442, 457, 709, 1731, 2722, 3107
Ppu21I	YACGTR	4 cut(s)	481, 511, 2509, 2589
Psp124BI	GAGCTC	6 cut(s)	14, 174, 621, 843, 1116, 1338
Psp1406I	AACGTT	1 cut(s)	1353
Psp6I	CCWGG	3 cut(s)	74, 2846, 3069
PspCI	CACGTG	3 cut(s)	481, 511, 2509
PspEI	GGTNACC	1 cut(s)	1705
PspFI	CCCAGC	1 cut(s)	2773
PspGI	CCWGG	3 cut(s)	74, 2846, 3069
PspN4I	GGNNCC	8 cut(s)	37, 190, 895, 1204, 1602, 2180, 2451, 2571
PspPI	GGNCC	7 cut(s)	88, 1203, 1261, 1318, 1344, 1487, 1787
PspXI	VCTCGAGB	2 cut(s)	446, 2902
PstI	CTGCAG	2 cut(s)	1825, 3079
PstNI	CAGNNNCTG	1 cut(s)	2687
PsuI	RGATCY	6 cut(s)	117, 150, 579, 1594, 1996, 2569
PteI	GCGCGC	2 cut(s)	458, 589
PvuI	CGATCG	1 cut(s)	613
PvuII	CAGCTG	2 cut(s)	625, 1124
RsaI	GTAC	5 cut(s)	392, 1441, 2756, 2845, 2922
RsaNI	GTAC	5 cut(s)	391, 1440, 2755, 2844, 2921
RseI	CAYNNNNRTG	1 cut(s)	992
SacI	GAGCTC	6 cut(s)	14, 174, 621, 843, 1116, 1338
SacII	CCGCGG	1 cut(s)	69
SalI	GTCGAC	3 cut(s)	398, 560, 3043
SapI	GCTCTTC	3 cut(s)	710, 848, 2740
SaqAI	TTAA	7 cut(s)	858, 1356, 1589, 1980, 2133, 2667, 2931
Sau96I	GGNCC	7 cut(s)	88, 1203, 1261, 1318, 1344, 1487, 1787
SchI	GAGTC	9 cut(s)	140, 206, 215, 443, 458, 709, 1731, 2723, 3107
ScrFI	CCNGG	6 cut(s)	76, 383, 504, 935, 2848, 3071
SfaNI	GCATC	8 cut(s)	372, 751, 914, 1081, 1501, 1638, 2297, 2720
SfcI	CTRYAG	2 cut(s)	1821, 3075
SfoI	GGCGCC	1 cut(s)	37
Sfr274I	CTCGAG	3 cut(s)	446, 710, 2902
Sfr303I	CCGCGG	1 cut(s)	69
SgrBI	CCGCGG	1 cut(s)	69
SinI	GGWCC	4 cut(s)	1203, 1261, 1318, 1487
SlaI	CTCGAG	3 cut(s)	446, 710, 2902
SmiMI	CAYNNNNRTG	1 cut(s)	992
SmlI	CTYRAG	7 cut(s)	446, 710, 802, 1037, 1187, 1491, 2902
SmoI	CTYRAG	7 cut(s)	446, 710, 802, 1037, 1187, 1491, 2902
SnaBI	TACGTA	1 cut(s)	2589
SphI	GCATGC	2 cut(s)	2191, 2639
SseBI	AGGCCT	1 cut(s)	800
SspDI	GGCGCC	1 cut(s)	35
SspMI	CTAG	4 cut(s)	1497, 1860, 2342, 2949
SstI	GAGCTC	6 cut(s)	14, 174, 621, 843, 1116, 1338
StuI	AGGCCT	1 cut(s)	800
StyD4I	CCNGG	6 cut(s)	74, 381, 502, 933, 2846, 3069
StyI	CCWWGG	5 cut(s)	987, 1017, 1220, 1793, 1896
TaaI	ACNGT	9 cut(s)	127, 823, 915, 1046, 1274, 1554, 1711, 2128, 2689
TaiI	ACGT	8 cut(s)	483, 513, 696, 780, 1356, 2511, 2591, 2807
TauI	GCSGC	9 cut(s)	36, 50, 65, 68, 71, 458, 986, 1107, 3038
TfiI	GAWTC	7 cut(s)	293, 811, 1256, 1565, 1874, 2432, 2652
Tru1I	TTAA	7 cut(s)	858, 1356, 1589, 1980, 2133, 2667, 2931
Tru9I	TTAA	7 cut(s)	858, 1356, 1589, 1980, 2133, 2667, 2931
TscAI	CASTG	6 cut(s)	34, 64, 554, 773, 1876, 2773
TseFI	GTSAC	4 cut(s)	476, 506, 817, 3053
TseI	GCWGC	8 cut(s)	423, 625, 656, 1101, 1577, 1931, 3032, 3074
Tsp45I	GTSAC	4 cut(s)	476, 506, 817, 3053
TspDTI	ATGAA	7 cut(s)	251, 1163, 1319, 1717, 1908, 2228, 2929
TspGWI	ACGGA	3 cut(s)	265, 2210, 2503
TspRI	CASTG	6 cut(s)	34, 64, 554, 773, 1876, 2773
Van91I	CCANNNNNTGG	2 cut(s)	1060, 2580
VneI	GTGCAC	1 cut(s)	482
VpaK11BI	GGWCC	4 cut(s)	1203, 1261, 1318, 1487
XapI	RAATTY	4 cut(s)	924, 1398, 1672, 2172
XbaI	TCTAGA	2 cut(s)	1859, 2341
XceI	RCATGY	4 cut(s)	868, 2191, 2639, 2677
XcmI	CCANNNNNNNNNTGG	1 cut(s)	994
XhoI	CTCGAG	3 cut(s)	446, 710, 2902
XmiI	GTMKAC	4 cut(s)	399, 561, 2678, 3044
XmnI	GAANNNNTTC	3 cut(s)	962, 1196, 1242
XspI	CTAG	4 cut(s)	1497, 1860, 2342, 2949
ZraI	GACGTC	2 cut(s)	778, 2805
Zsp2I	ATGCAT	1 cut(s)	2189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.