Rh7DG337700

Conserved oligomeric Golgi complex subunit 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0005295
Physical Location & Seq
Forward (+)
44368629 .. 44376264
7636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG337700.1

Sequence Viewer

Length: 2763 bp
ATGAGAGTGAGTTCGACGATCAATGAGGGAGGAGGAGCGGCGGCGGCTTCGGCTTCTAGGGACGCGGAAGGGCTGTTCCGCACCAAAGGCATCACCGAGATTCGCAATGTCGAATCGACGACGCGGAAGCAGATCCAAGCCAAGAAGGAGGAGCTCCGTCAACTCGTCGGCACTCGCTACCGCGACCTCATCGACTCCGCCGACTCCATCGTCCTCATGAAGCGCTCCGCCCACTCCATCTCCCGCAACCTCTCCTCCGTCCACCACGCCATCATCCACTCCCTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCCAATTCCAAGTCCTCCTCCGACTCCTCCGTCCGCATCTACGGAATCGCCTGCCGGGTCAAGTACCTGGTCGACACCCCCGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTCCTCGAGTCCGCCGCCCGCTACGTCCGCGCCAGCCACGTCCACTTCACCCTCACCACCCTCCACAAGCCCTTCCTCTCTCACTTTCCTCTCCTCCAGCACCAATGGCAGATCGTCGACAGCTTCAAGTCCCAGATCTCCCAGCGCGCCCGCGACCGCCTCTCCGATCACCGCCAATCCAACCTCCCCGTCTCCTCCTACGCCGACGCTTTGGCTGCCGTCGCTCTCATCGACGACCTCCCTCCCCAACACGTCCTCTCCCTCTTCCTCGACACCCGCAAGGCCTGGGTTTCCCACATTTTGAATACTTCCACTTCCTCAGTTGAATGCTCCCAAGTTGTTTCGGTCCTTTGCGAGGCCCTCAGAGTTATTCAGGTCACTGTGGGCCAGGTTGGGGAATTGTTTCTCCGGGTTTTCAACGACATGCCCCTGTTTTACAAGGTGGTCTTGGGTTGCCCTCCTGCATCTCAACTCTTCGGCGGCATTCCCAACCCAGATGAGGAGGTCAAGCTTTGGAATTCCTTCAGGGACAAGTTGGAGTCTGCCATGGTAATGCTGGACAAAGATGATATTGCGAAAGCTTCTTCTTCATGGCTTGCGGACTGTGGAGCTCAGATGGTGGATAAGATCAATGGCAGGTATCTCATTGATGCTATTGGCAGCGGCAAAGAGCTTGCCTCCGCCGAGAGGTTGATAAGGGAGACTATGAATAGCAAAGAGGTCTTGGAAGGAAGCTTGGACTGGCTCAAGAAAGTTTTCGGCTCCCAAATTGACCTGCCATGGAGTAGAATGAGTGAACTTGTTCTGGGAGATGATTCAGACCTCTGGGACAGTATCTTTGAAAGTGGATTTGTTGGGAGGATGAAGGTGATTGTGGACTCCAGGTTTGAGAAGCTCAAGACAGCTGCCAATATTAATGATGGTGAGGCCATTGAATTCCTAGGTGCAGGTGGTGGAGTTTGGTTTATAGAATCCAAATCCAATAGTAAGAAGGCTACTGCTCTGCCATGTGAAGAGAACTGTCTCAATTTCTATTTCGGTCCTCAAGTTAGTGATATTAGGGATGCGGTGGATAGCAGCTGTCAGGATGTGCTTGATGACCTCCTCTCTTTTCTGGAATCTCCAAAGGCAGCTGTCAGATTAAAGAATCTGGCACCCTATCTACAAGACAAGTGTTTCCAAACTATATCCATCATATTGGAGCAACTGAGTAGTGAGCTTGATAATTTGGAAAAGGGCAGCAACAAGCAAAAGCTGCTAACCGTTGAAAGGGCTCTATTCATTGGGAGACTCTTGTTTGCATTGCAGAATCACTCCAAGCACATTCCCTTAGTACTTGGCCCTCCAAGGTCTTGGGTGAATGAAAGTGAGTCTGCAGTTTTCGACAAGTTACCATCCTTATTGAGACAGTCTAGAGCCCCCACCGATTCTCATGTGCTTGATAGCCCCTTGGGCTCTAAAAGACACACCTCATCTGCTACTGCTGCACTGCTTGGAGCCAGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATGTGACTATGCGAAATCTCCGCATTAGAGCGCACACTTTCTGGATGACTTGGCTATCCGATGAGCTCTCAGTTATACTTGCCCGTGATCTAGAAAAGGACGATGCTTTGTCATCTTCAACTCCCCTGAGGGGTTGGGAAGAGACAGTAGTTAGGCAAGAGCAGTCTGATGATAACCAATCAGAGATGAAAATATGGCTCCCATCCATGCCTTCTCTCTATGTTGTCTCATTTCTATTCCGTATATGTGAAGAAGTTCATCGAATAGGAGGTCATGTCCTTGACAAAATAATTCTGCAAAAATTTGCATTACAACTGTTGGAAAAGGTCATTGGCATTTATGGCGACTTCCTTTCTAATCTAGATGCTGGTGGGTCTCAAGTGTCAGAAAAAGGAGTTTTGCAGATTTTGTTAGACTTGAGATTTGTTTTTGATGTCCTCTCTGGGGGTGATTCTAATTTGAATGAGGAGCGGAAGACAAAAAGTACTTTCAGAAGGAAGCAGGACCAAAGCCGTATGAAGTCAGCTACTAGAGAGCGTTTTGATGGGTTGATACATCATTTTTCACAAAGATTGGATCCCATAGACTGGCTTACGTACGAGCCGTATCTTTGGGAAAATGAGAAGCAGTCCTACCTCCGGCATGCCGTCCTTTTTGGATTCTTTGTGCAACTTAATCGCATGTACACAGACACTGTTCAGAAACTTCCTACTAATTCAGAGTCCAATATCATGAGATGCTCTTCAGTTCCTCGCTTTAAGTACCTTCCAATCAGGTTACTCTTTCTATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps51

Protein Analysis

920

Amino Acids

103.28

Weight (kDa)

6.37

Isoelectric Point (pI)

49.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 17 - 90 3.1e-14 Vps51/EXO84/COG1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1373
AasI GACNNNNNNGTC 2 cut(s) 209, 350
Acc36I ACCTGC 3 cut(s) 1062, 1218, 1373
AccB1I GGYRCC 1 cut(s) 1588
AccB7I CCANNNNNTGG 1 cut(s) 2556
AccBSI CCGCTC 2 cut(s) 38, 2440
AccI GTMKAC 2 cut(s) 393, 552
AccII CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
AclWI GGATC 3 cut(s) 127, 2540, 2553
AcsI RAATTY 3 cut(s) 952, 1370, 2270
AcuI CTGAAG 2 cut(s) 943, 2697
AfaI GTAC 6 cut(s) 386, 1770, 2455, 2567, 2654, 2732
AfeI AGCGCT 1 cut(s) 224
AfiI CCNNNNNNNGG 9 cut(s) 790, 829, 934, 1122, 1704, 2099, 2413, 2556, 2607
AflIII ACRYGT 1 cut(s) 685
AjiI CACGTC 2 cut(s) 475, 688
AjnI CCWGG 4 cut(s) 387, 719, 822, 1316
AjuI GAANNNNNNNTTGG 2 cut(s) 2283, 2315
AloI GAACNNNNNNTCC 2 cut(s) 59, 91
Alw21I GWGCWC 3 cut(s) 156, 1048, 2037
Alw26I GTCTC 8 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200, 2349
AlwI GGATC 3 cut(s) 127, 2540, 2553
AlwNI CAGNNNCTG 1 cut(s) 2663
Ama87I CYCGRG 2 cut(s) 401, 440
Aor51HI AGCGCT 1 cut(s) 224
AoxI GGCC 5 cut(s) 717, 792, 820, 1362, 1774
ApeKI GCWGC 9 cut(s) 417, 650, 1095, 1340, 1512, 1565, 1674, 1690, 1919
ApoI RAATTY 3 cut(s) 952, 1370, 2270
ArsI GACNNNNNNTTYG 8 cut(s) 1256, 1288, 1304, 1336, 2224, 2256, 2375, 2407
AseI ATTAAT 1 cut(s) 1350
Asp700I GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
AspA2I CCTAGG 1 cut(s) 1375
AspLEI GCGC 5 cut(s) 225, 467, 582, 584, 2002
AspS9I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
AsuC2I CCSGG 2 cut(s) 377, 845
AsuHPI GGTGA 8 cut(s) 85, 475, 481, 596, 1315, 1370, 1804, 2429
AvaI CYCGRG 2 cut(s) 401, 440
AvaII GGWCC 3 cut(s) 781, 1475, 2473
AvrII CCTAGG 1 cut(s) 1375
AxyI CCTNAGG 1 cut(s) 2096
BamHI GGATCC 1 cut(s) 2545
BanI GGYRCC 1 cut(s) 1588
BanII GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
BarI GAAGNNNNNNTAC 2 cut(s) 2585, 2617
BbsI GAAGAC 1 cut(s) 2450
Bbv12I GWGCWC 3 cut(s) 156, 1048, 2037
BbvI GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
BccI CCATC 9 cut(s) 215, 245, 278, 1045, 1349, 1634, 1837, 2179, 2507
BceAI ACGGC 4 cut(s) 638, 2466, 2557, 2600
BcgI CGANNNNNNTGC 2 cut(s) 2627, 2661
BciT130I CCWGG 4 cut(s) 389, 721, 824, 1318
BcnI CCSGG 2 cut(s) 377, 845
BcoDI GTCTC 8 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200, 2349
BfaI CTAG 6 cut(s) 57, 1376, 1848, 2060, 2330, 2499
BfmI CTRYAG 1 cut(s) 1809
BfoI RGCGCY 1 cut(s) 226
BfuAI ACCTGC 3 cut(s) 1062, 1218, 1373
BglI GCCNNNNNGGC 1 cut(s) 1887
BglII AGATCT 1 cut(s) 570
BlnI CCTAGG 1 cut(s) 1375
BmcAI AGTACT 2 cut(s) 1770, 2455
Bme1390I CCNGG 6 cut(s) 377, 389, 721, 824, 845, 1318
Bme18I GGWCC 3 cut(s) 781, 1475, 2473
BmeT110I CYCGRG 2 cut(s) 401, 440
BmgBI CACGTC 2 cut(s) 475, 688
BmgT120I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
BmiI GGNNCC 5 cut(s) 1198, 1590, 1933, 2168, 2547
BmrFI CCNGG 6 cut(s) 377, 389, 721, 824, 845, 1318
BmsI GCATC 8 cut(s) 99, 366, 908, 1075, 1489, 2062, 2323, 2696
BpiI GAAGAC 1 cut(s) 2450
BplI GAGNNNNNCTC 2 cut(s) 1097, 1129
BpmI CTGGAG 2 cut(s) 515, 1300
BpuEI CTTGAG 5 cut(s) 1166, 1316, 1464, 2331, 2407
BpuMI CCSGG 2 cut(s) 377, 845
BsaAI YACGTR 1 cut(s) 2565
BsaI GGTCTC 1 cut(s) 2349
BsaJI CCNNGG 6 cut(s) 720, 981, 1214, 1375, 1781, 1884
Bsc4I CCNNNNNNNGG 9 cut(s) 790, 829, 934, 1122, 1704, 2099, 2413, 2556, 2607
Bse1I ACTGG 2 cut(s) 1181, 2561
Bse21I CCTNAGG 1 cut(s) 2096
Bse3DI GCAATG 2 cut(s) 112, 1736
BseBI CCWGG 4 cut(s) 389, 721, 824, 1318
BseDI CCNNGG 6 cut(s) 720, 981, 1214, 1375, 1781, 1884
BseGI GGATG 7 cut(s) 273, 1302, 1504, 1528, 1829, 2019, 2171
BseLI CCNNNNNNNGG 9 cut(s) 790, 829, 934, 1122, 1704, 2099, 2413, 2556, 2607
BseMI GCAATG 2 cut(s) 112, 1736
BseMII CTCAG 6 cut(s) 768, 811, 1061, 1634, 2052, 2087
BseNI ACTGG 2 cut(s) 1181, 2561
BsePI GCGCGC 1 cut(s) 580
BseXI GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
BseYI CCCAGC 1 cut(s) 576
BsgI GTGCAG 2 cut(s) 1401, 1905
Bsh1236I CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
Bsh1285I CGRYCG 1 cut(s) 592
BshFI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
BshNI GGYRCC 1 cut(s) 1588
BsiEI CGRYCG 1 cut(s) 592
BsiHKAI GWGCWC 3 cut(s) 156, 1048, 2037
BsiHKCI CYCGRG 2 cut(s) 401, 440
BsiSI CCGG 3 cut(s) 376, 844, 2608
BsiWI CGTACG 1 cut(s) 2565
BslFI GGGAC 4 cut(s) 74, 550, 977, 1277
BslI CCNNNNNNNGG 9 cut(s) 790, 829, 934, 1122, 1704, 2099, 2413, 2556, 2607
BsmAI GTCTC 8 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200, 2349
BsmBI CGTCTC 1 cut(s) 631
BsmFI GGGAC 4 cut(s) 74, 550, 977, 1277
BsmI GAATGC 2 cut(s) 767, 918
BsnI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
Bso31I GGTCTC 1 cut(s) 2349
BsoBI CYCGRG 2 cut(s) 401, 440
Bsp1286I GDGCHC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
Bsp1407I TGTACA 1 cut(s) 2652
Bsp143I GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
Bsp19I CCATGG 2 cut(s) 981, 1214
BspANI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
BspCNI CTCAG 6 cut(s) 767, 810, 1060, 1635, 2051, 2088
BspFNI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
BspHI TCATGA 2 cut(s) 216, 2700
BspLI GGNNCC 5 cut(s) 1198, 1590, 1933, 2168, 2547
BspMAI CTGCAG 1 cut(s) 1813
BspMI ACCTGC 3 cut(s) 1062, 1218, 1373
BspPI GGATC 3 cut(s) 127, 2540, 2553
BspQI GCTCTTC 2 cut(s) 1956, 2716
BspT107I GGYRCC 1 cut(s) 1588
BspTNI GGTCTC 1 cut(s) 2349
BsrBI CCGCTC 2 cut(s) 38, 2440
BsrDI GCAATG 2 cut(s) 112, 1736
BsrGI TGTACA 1 cut(s) 2652
BsrI ACTGG 2 cut(s) 1181, 2561
BssECI CCNNGG 6 cut(s) 720, 981, 1214, 1375, 1781, 1884
BssHII GCGCGC 1 cut(s) 580
BssMI GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
BssT1I CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
Bst2UI CCWGG 4 cut(s) 389, 721, 824, 1318
Bst4CI ACNGT 9 cut(s) 817, 1040, 1268, 1457, 1699, 1845, 2116, 2286, 2665
Bst6I CTCTTC 6 cut(s) 704, 914, 1443, 1956, 2103, 2716
BstAPI GCANNNNNTGC 1 cut(s) 1690
BstAUI TGTACA 1 cut(s) 2652
BstBAI YACGTR 1 cut(s) 2565
BstDEI CTNAG 7 cut(s) 754, 797, 1047, 1643, 1765, 2038, 2096
BstDSI CCRYGG 2 cut(s) 981, 1214
BstENI CCTNNNNNAGG 1 cut(s) 788
BstF5I GGATG 7 cut(s) 273, 1302, 1504, 1528, 1829, 2019, 2171
BstFNI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
BstH2I RGCGCY 1 cut(s) 226
BstHHI GCGC 5 cut(s) 225, 467, 582, 584, 2002
BstKTI GATC 8 cut(s) 21, 135, 549, 573, 604, 1065, 2059, 2548
BstMAI GTCTC 8 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200, 2349
BstMBI GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
BstMCI CGRYCG 1 cut(s) 592
BstNI CCWGG 4 cut(s) 389, 721, 824, 1318
BstNSI RCATGY 3 cut(s) 862, 2615, 2653
BstSCI CCNGG 6 cut(s) 375, 387, 719, 822, 843, 1316
BstSFI CTRYAG 1 cut(s) 1809
BstSNI TACGTA 1 cut(s) 2565
BstUI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
BstV1I GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
BstV2I GAAGAC 1 cut(s) 2450
BstX2I RGATCY 3 cut(s) 132, 570, 2545
BstXI CCANNNNNNTGG 2 cut(s) 1633, 1788
BstYI RGATCY 3 cut(s) 132, 570, 2545
Bsu36I CCTNAGG 1 cut(s) 2096
BsuRI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
BtgI CCRYGG 2 cut(s) 981, 1214
BtrI CACGTC 2 cut(s) 475, 688
BtsCI GGATG 7 cut(s) 273, 1302, 1504, 1528, 1829, 2019, 2171
BtsI GCAGTG 1 cut(s) 1922
BtsIMutI CAGTG 3 cut(s) 813, 1922, 2661
BveI ACCTGC 3 cut(s) 1062, 1218, 1373
CaiI CAGNNNCTG 1 cut(s) 2663
CciI TCATGA 2 cut(s) 216, 2700
CfoI GCGC 5 cut(s) 225, 467, 582, 584, 2002
Cfr13I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
CseI GACGC 3 cut(s) 71, 130, 650
CsiI ACCWGGT 1 cut(s) 387
Csp6I GTAC 6 cut(s) 385, 1769, 2454, 2566, 2653, 2731
CviQI GTAC 6 cut(s) 385, 1769, 2454, 2566, 2653, 2731
DdeI CTNAG 7 cut(s) 754, 797, 1047, 1643, 1765, 2038, 2096
DpnI GATC 8 cut(s) 20, 134, 548, 572, 603, 1064, 2058, 2547
DpnII GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
DrdI GACNNNNNNGTC 2 cut(s) 209, 350
DseDI GACNNNNNNGTC 2 cut(s) 209, 350
Eam1104I CTCTTC 6 cut(s) 704, 914, 1443, 1956, 2103, 2716
EarI CTCTTC 6 cut(s) 704, 914, 1443, 1956, 2103, 2716
EciI GGCGGA 4 cut(s) 187, 217, 436, 1105
Ecl136II GAGCTC 3 cut(s) 154, 1046, 2035
Eco105I TACGTA 1 cut(s) 2565
Eco130I CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
Eco147I AGGCCT 1 cut(s) 719
Eco24I GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
Eco31I GGTCTC 1 cut(s) 2349
Eco47I GGWCC 3 cut(s) 781, 1475, 2473
Eco47III AGCGCT 1 cut(s) 224
Eco53kI GAGCTC 3 cut(s) 154, 1046, 2035
Eco57I CTGAAG 2 cut(s) 943, 2697
Eco81I CCTNAGG 1 cut(s) 2096
Eco88I CYCGRG 2 cut(s) 401, 440
EcoICRI GAGCTC 3 cut(s) 154, 1046, 2035
EcoNI CCTNNNNNAGG 1 cut(s) 788
EcoO109I RGGNCCY 1 cut(s) 793
EcoRI GAATTC 2 cut(s) 952, 1370
EcoRII CCWGG 4 cut(s) 387, 719, 822, 1316
EcoT14I CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
EcoT38I GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
ErhI CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
Esp3I CGTCTC 1 cut(s) 631
FalI AAGNNNNNCTT 2 cut(s) 866, 898
FaqI GGGAC 4 cut(s) 74, 550, 977, 1277
FauI CCCGC 4 cut(s) 251, 461, 593, 719
FblI GTMKAC 2 cut(s) 393, 552
FokI GGATG 7 cut(s) 260, 1309, 1511, 1535, 1816, 2026, 2158
FriOI GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
FspBI CTAG 6 cut(s) 57, 1376, 1848, 2060, 2330, 2499
GlaI GCGC 5 cut(s) 224, 466, 581, 583, 2001
GsaI CCCAGC 1 cut(s) 580
GsuI CTGGAG 2 cut(s) 515, 1300
HaeII RGCGCY 1 cut(s) 226
HaeIII GGCC 5 cut(s) 719, 794, 822, 1364, 1776
HapII CCGG 3 cut(s) 376, 844, 2608
HgaI GACGC 3 cut(s) 71, 130, 650
HhaI GCGC 5 cut(s) 225, 467, 582, 584, 2002
Hin6I GCGC 5 cut(s) 223, 465, 580, 582, 2000
HinP1I GCGC 5 cut(s) 223, 465, 580, 582, 2000
HincII GTYRAC 3 cut(s) 161, 394, 553
HindII GTYRAC 3 cut(s) 161, 394, 553
HindIII AAGCTT 3 cut(s) 944, 1014, 1168
HpaII CCGG 3 cut(s) 376, 844, 2608
HphI GGTGA 8 cut(s) 85, 475, 481, 596, 1315, 1370, 1804, 2429
Hpy166II GTNNAC 8 cut(s) 161, 262, 394, 478, 553, 1232, 1312, 2655
Hpy8I GTNNAC 8 cut(s) 161, 262, 394, 478, 553, 1232, 1312, 2655
Hpy99I CGWCG 9 cut(s) 19, 121, 124, 170, 428, 554, 644, 659, 671
HpyCH4III ACNGT 9 cut(s) 817, 1040, 1268, 1457, 1699, 1845, 2116, 2286, 2665
HpyCH4IV ACGT 4 cut(s) 459, 474, 687, 2564
HpyF3I CTNAG 7 cut(s) 754, 797, 1047, 1643, 1765, 2038, 2096
HpySE526I ACGT 4 cut(s) 459, 474, 687, 2564
HspAI GCGC 5 cut(s) 223, 465, 580, 582, 2000
Kzo9I GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
LguI GCTCTTC 2 cut(s) 1956, 2716
Lsp1109I GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
LweI GCATC 8 cut(s) 99, 366, 908, 1075, 1489, 2062, 2323, 2696
MabI ACCWGGT 1 cut(s) 387
MaeI CTAG 6 cut(s) 57, 1376, 1848, 2060, 2330, 2499
MaeII ACGT 4 cut(s) 459, 474, 687, 2564
MaeIII GTNAC 4 cut(s) 811, 1824, 1972, 2745
MalI GATC 8 cut(s) 20, 134, 548, 572, 603, 1064, 2058, 2547
MbiI CCGCTC 2 cut(s) 38, 2440
MboI GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
MflI RGATCY 3 cut(s) 132, 570, 2545
MhlI GDGCHC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
MmeI TCCRAC 4 cut(s) 366, 639, 951, 2268
MroXI GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
MseI TTAA 5 cut(s) 1350, 1577, 1968, 2643, 2727
MslI CAYNNNNRTG 1 cut(s) 986
MspA1I CMGCKG 4 cut(s) 1098, 1340, 1515, 1568
MspI CCGG 3 cut(s) 376, 844, 2608
MspR9I CCNGG 6 cut(s) 377, 389, 721, 824, 845, 1318
Mva1269I GAATGC 2 cut(s) 767, 918
MvaI CCWGG 4 cut(s) 389, 721, 824, 1318
MvnI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
NciI CCSGG 2 cut(s) 377, 845
NcoI CCATGG 2 cut(s) 981, 1214
NdeII GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
NlaIV GGNNCC 5 cut(s) 1198, 1590, 1933, 2168, 2547
NmeAIII GCCGAG 1 cut(s) 1144
NmuCI GTSAC 2 cut(s) 811, 1972
NspI RCATGY 3 cut(s) 862, 2615, 2653
PaeI GCATGC 1 cut(s) 2615
PaeR7I CTCGAG 1 cut(s) 440
PagI TCATGA 2 cut(s) 216, 2700
PaqCI CACCTGC 1 cut(s) 1373
PauI GCGCGC 1 cut(s) 580
PceI AGGCCT 1 cut(s) 719
PciSI GCTCTTC 2 cut(s) 1956, 2716
PcsI WCGNNNNNNNCGW 4 cut(s) 198, 399, 663, 2570
PctI GAATGC 2 cut(s) 767, 918
PdmI GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
Pfl23II CGTACG 1 cut(s) 2565
PflMI CCANNNNNTGG 1 cut(s) 2556
Ppu21I YACGTR 1 cut(s) 2565
PshBI ATTAAT 1 cut(s) 1350
Psp124BI GAGCTC 3 cut(s) 156, 1048, 2037
Psp6I CCWGG 4 cut(s) 387, 719, 822, 1316
PspFI CCCAGC 1 cut(s) 576
PspGI CCWGG 4 cut(s) 387, 719, 822, 1316
PspLI CGTACG 1 cut(s) 2565
PspN4I GGNNCC 5 cut(s) 1198, 1590, 1933, 2168, 2547
PspPI GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
PspXI VCTCGAGB 1 cut(s) 440
PstI CTGCAG 1 cut(s) 1813
PstNI CAGNNNCTG 1 cut(s) 2663
PsuI RGATCY 3 cut(s) 132, 570, 2545
PteI GCGCGC 1 cut(s) 580
PvuII CAGCTG 3 cut(s) 1340, 1515, 1568
RsaI GTAC 6 cut(s) 386, 1770, 2455, 2567, 2654, 2732
RsaNI GTAC 6 cut(s) 385, 1769, 2454, 2566, 2653, 2731
RseI CAYNNNNRTG 1 cut(s) 986
SacI GAGCTC 3 cut(s) 156, 1048, 2037
SalI GTCGAC 2 cut(s) 392, 551
SapI GCTCTTC 2 cut(s) 1956, 2716
SaqAI TTAA 5 cut(s) 1350, 1577, 1968, 2643, 2727
Sau3AI GATC 8 cut(s) 18, 132, 546, 570, 601, 1062, 2056, 2545
Sau96I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
ScaI AGTACT 2 cut(s) 1770, 2455
ScrFI CCNGG 6 cut(s) 377, 389, 721, 824, 845, 1318
SduI GDGCHC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
SexAI ACCWGGT 1 cut(s) 387
SfaNI GCATC 8 cut(s) 99, 366, 908, 1075, 1489, 2062, 2323, 2696
SfcI CTRYAG 1 cut(s) 1809
Sfr274I CTCGAG 1 cut(s) 440
SinI GGWCC 3 cut(s) 781, 1475, 2473
SlaI CTCGAG 1 cut(s) 440
SmiMI CAYNNNNRTG 1 cut(s) 986
SmlI CTYRAG 6 cut(s) 440, 1181, 1331, 1479, 2346, 2386
SmoI CTYRAG 6 cut(s) 440, 1181, 1331, 1479, 2346, 2386
SnaBI TACGTA 1 cut(s) 2565
SphI GCATGC 1 cut(s) 2615
SseBI AGGCCT 1 cut(s) 719
SspI AATATT 1 cut(s) 1348
SspMI CTAG 6 cut(s) 57, 1376, 1848, 2060, 2330, 2499
SstI GAGCTC 3 cut(s) 156, 1048, 2037
StuI AGGCCT 1 cut(s) 719
StyD4I CCNGG 6 cut(s) 375, 387, 719, 822, 843, 1316
StyI CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
TaaI ACNGT 9 cut(s) 817, 1040, 1268, 1457, 1699, 1845, 2116, 2286, 2665
TaiI ACGT 4 cut(s) 462, 477, 690, 2567
TaqII GACCGA 2 cut(s) 769, 1463
TatI WGTACW 3 cut(s) 1768, 2453, 2652
TauI GCSGC 6 cut(s) 41, 44, 47, 452, 918, 1101
Tru1I TTAA 5 cut(s) 1350, 1577, 1968, 2643, 2727
Tru9I TTAA 5 cut(s) 1350, 1577, 1968, 2643, 2727
TscAI CASTG 3 cut(s) 820, 1929, 2668
TseFI GTSAC 2 cut(s) 811, 1972
TseI GCWGC 9 cut(s) 417, 650, 1095, 1340, 1512, 1565, 1674, 1690, 1919
Tsp45I GTSAC 2 cut(s) 811, 1972
TspDTI ATGAA 9 cut(s) 233, 1014, 1157, 1313, 1705, 1812, 2171, 2216, 2501
TspGWI ACGGA 5 cut(s) 146, 247, 340, 378, 2198
TspRI CASTG 3 cut(s) 820, 1929, 2668
Van91I CCANNNNNTGG 1 cut(s) 2556
VpaK11BI GGWCC 3 cut(s) 781, 1475, 2473
VspI ATTAAT 1 cut(s) 1350
XagI CCTNNNNNAGG 1 cut(s) 788
XapI RAATTY 3 cut(s) 952, 1370, 2270
XbaI TCTAGA 3 cut(s) 1847, 2059, 2329
XceI RCATGY 3 cut(s) 862, 2615, 2653
XcmI CCANNNNNNNNNTGG 1 cut(s) 988
XhoI CTCGAG 1 cut(s) 440
XmaJI CCTAGG 1 cut(s) 1375
XmiI GTMKAC 2 cut(s) 393, 552
XmnI GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
XspI CTAG 6 cut(s) 57, 1376, 1848, 2060, 2330, 2499
ZrmI AGTACT 2 cut(s) 1770, 2455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.