Rh7AG338900

Conserved oligomeric Golgi complex subunit 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0005295
Physical Location & Seq
Forward (+)
42654967 .. 42662794
7828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG338900.1

Sequence Viewer

Length: 2349 bp
ATGAGAGTGAGTTCGACGAGCAATGAGGGAGGAGGAGCGGCGGCGGCTTCGGCTTCTAGGGACGCGGAAGGGCTGTTCCGCACCAAAGGCATCACCGAGATTCGCAATGTCGAATCGACGACGCGGAAGCAGATCCAAGCCAAGAAGGAGGAGCTCCGTCAACTCGTCGGCACTCGCTACCGCGACCTCATCGACTCCGCCGACTCCATTGTCCTCATGAAGCGTTCCGCCCACTCCATCTCCCGCAACCTCTCCTCCGTCCACCACGCCATCATCCACTCCCTCTCTCTTTCTTCTTCTTCTTCTCTCTCCAATTCCGATTCCAATTCCAAGTCCTCCTCCGACTCCTCCGTCCGCATCTACGGAATCGCCTGCCGGGTCAAGTACCTGGTCGACACCCCCGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTCCTCGAGTCCGCCGCCCGCTACGTCCGCGCCAGCCACGTCCACTTCACCCTCACCACCCTCCACAAGCCCTTCCTCTCTCACTTTCCTCTCCTCCAGCACCAATGGCAGATCGTCGACAGCTTCAAGTCCCAGATCTCCCAGCGCGCCCGCGACCGCCTCTCCGATCACCGCCAATCCAACCTCCCCGTCTCCTCCTACGCCGACGCTTTGGCTGCCGTCGCTCTCATCGACGACCTCCCTCCCCAACACGTCCTCTCCCTCTTCCTCGACACCCGCAAGGCCTGGGTTTCCCACATTTTGAATACTTCCACTTCCTCAGTTGAATGCTCCGACGTTGTTTCGGTCCTTTGCGAGGCCCTGAGGGTTATTCAGGTCACTGTGGGCCAGGTTGGGGAATTGTTTCTCCGGGTTTTCAACGACATGCCCCTGTTTTACAAGGTGGTCTTGGGTTGCCCTCCTGCATCTCAACTCTTTGGCGGCATTCCCAACCCGGATGAGGAGGTCAAGCTTTGGAATTCCTTCAGGGACAAGTTGGAGTCTGCCATGGTTATGCTGGACAAAGACTATATTGCGAAAGCTTCTTCTTCATGGCTTGCGGACTGTGGAGCTCAGATGGTGGATAAGATCAATGGCAGGTATCTCATTGATGCTATTGGCAGCGGCAAAGAGCTTGCCTCCGCCGAGAGGTTGATAAGGGAGACTATGAATAGCAAAGAGGTCTTGGAAGGAAGCTTGGAGTGGCTCAAGAAAGTTTTCGGCTCCCAAATTGACCTGCCATGGAGTAGAATGAGTGAGCTTGTTCTGGGAGATGATTCAGACCTCTGGGACAGTATCTTTGAAAGTGGATTTGTTGGGAGGATGAAGGTGATTGTGGACTCCAGGTTTGAGAAGCTCAAGACAGCTGCCAATATTAATGATGGTGAGGCCATTGAATTCCTAGGTGCAGGTGGTGGAGTTTGGTTTATAGAATCCAAATCCAATAGTAAGAAGGCTACTGCTCTGCCATGTGAAGAGAACTGTCTCAATTTCTATTTTGGTCCTCAAGTTAGTGATATTAGGGATGCGCTGGATAGCAGCTGTCAGGATGTGCTTGATGACCTCCTCTCTTTTCTGGAATCTCCAAAGGCAGCTGTCAGATTAAAGAATCTGGCACCCTATCTACAAGACAAGTGTTTCCAAACTATATCCATCATATTGGAGCAACTGAGTAGTGAGCTTGATAATTTGGAAAAGGGCAGCAACAAGCAAAAGCTGCTAACCATTGAAAGGGCTCTATTCATTGGGAGACTCTTGTTTGCATTGCAGAATCACTCCAAGCACATTCCCTTAGTACTTGGCCCTCCAAGGTCTTGGGTGAATGAAAGTGAGTCTGCAGTTTTCGACAAGTTACCATCCTTATTGAGACAGTCTAGAGCCCCCACCGATTCTCATGTGCTTGATAGCCCCTTGGGCTCTAAAAGACACACCTCATCTGCTACTGCTGCACTGCTTGGAGCCAGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATGTGACTATGCGAAATCTCCGCATTAGAGCGCACACTTTCTGGATGACTTGGCTATCCAATGAGCTCTCAGTTATACTTGCCCGTGATCTAGAAAAGGACGATGCTTTGTCATCCTCAACTCCCCTGAGGGGTTGGGAAGAGACAGTAGTTAGGCAAGAGCAGTCTGATGATAACCAATCAGAGATGAAAATATGGCTCCCATCCATGCCTTCTCTCTATGTTGTCTCATTTCTATTCCGTATATGTGAAGAAGTTCATCGAATAGGAGGTCATGTCCTTGACAAAATAATTCTGCAAAAATTTGCATTACAACTGTTGGAAAAGGTATGCGACTCTGCTTGGTATCTTACTTCACTTCATCTTTTCTGTATTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps51

Protein Analysis

782

Amino Acids

87.2

Weight (kDa)

6.1

Isoelectric Point (pI)

48.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 17 - 90 2.5e-14 Vps51/EXO84/COG1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1373
AasI GACNNNNNNGTC 2 cut(s) 209, 350
Acc36I ACCTGC 3 cut(s) 1062, 1218, 1373
AccB1I GGYRCC 1 cut(s) 1588
AccBSI CCGCTC 1 cut(s) 38
AccI GTMKAC 2 cut(s) 393, 552
AccII CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
AclWI GGATC 1 cut(s) 127
AcsI RAATTY 3 cut(s) 952, 1370, 2270
AcuI CTGAAG 1 cut(s) 943
AfaI GTAC 2 cut(s) 386, 1770
AfiI CCNNNNNNNGG 6 cut(s) 790, 829, 934, 1122, 1704, 2099
AflIII ACRYGT 1 cut(s) 685
AgsI TTSAA 8 cut(s) 562, 739, 761, 853, 1277, 1370, 1703, 1961
AjiI CACGTC 2 cut(s) 475, 688
AjnI CCWGG 4 cut(s) 387, 719, 822, 1316
AloI GAACNNNNNNTCC 2 cut(s) 59, 91
Alw21I GWGCWC 3 cut(s) 156, 1048, 2037
Alw26I GTCTC 7 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200
AlwI GGATC 1 cut(s) 127
Ama87I CYCGRG 2 cut(s) 401, 440
AoxI GGCC 5 cut(s) 717, 792, 820, 1362, 1774
ApeKI GCWGC 9 cut(s) 417, 650, 1095, 1340, 1512, 1565, 1674, 1690, 1919
ApoI RAATTY 3 cut(s) 952, 1370, 2270
ArsI GACNNNNNNTTYG 6 cut(s) 1256, 1288, 1304, 1336, 2224, 2256
AseI ATTAAT 1 cut(s) 1350
Asp700I GAANNNNTTC 4 cut(s) 837, 956, 1190, 2223
AspA2I CCTAGG 1 cut(s) 1375
AspLEI GCGC 5 cut(s) 467, 582, 584, 1504, 2002
AspS9I GGNCC 5 cut(s) 781, 793, 820, 1475, 1775
AsuC2I CCSGG 3 cut(s) 377, 845, 929
AsuHPI GGTGA 7 cut(s) 85, 475, 481, 596, 1315, 1370, 1804
AvaI CYCGRG 2 cut(s) 401, 440
AvaII GGWCC 2 cut(s) 781, 1475
AvrII CCTAGG 1 cut(s) 1375
AxyI CCTNAGG 2 cut(s) 797, 2096
BanI GGYRCC 1 cut(s) 1588
BanII GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
Bbv12I GWGCWC 3 cut(s) 156, 1048, 2037
BbvI GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
BccI CCATC 7 cut(s) 245, 278, 1045, 1349, 1634, 1837, 2179
BceAI ACGGC 1 cut(s) 638
BciT130I CCWGG 4 cut(s) 389, 721, 824, 1318
BcnI CCSGG 3 cut(s) 377, 845, 929
BcoDI GTCTC 7 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200
BfaI CTAG 4 cut(s) 57, 1376, 1848, 2060
BfmI CTRYAG 1 cut(s) 1809
BfuAI ACCTGC 3 cut(s) 1062, 1218, 1373
BglI GCCNNNNNGGC 1 cut(s) 1887
BglII AGATCT 1 cut(s) 570
BlnI CCTAGG 1 cut(s) 1375
BmcAI AGTACT 1 cut(s) 1770
Bme1390I CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
Bme18I GGWCC 2 cut(s) 781, 1475
BmeT110I CYCGRG 2 cut(s) 401, 440
BmgBI CACGTC 2 cut(s) 475, 688
BmgT120I GGNCC 5 cut(s) 781, 793, 820, 1475, 1775
BmiI GGNNCC 4 cut(s) 1198, 1590, 1933, 2168
BmrFI CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
BmsI GCATC 6 cut(s) 99, 366, 908, 1075, 1489, 2062
BplI GAGNNNNNCTC 2 cut(s) 1097, 1129
BpmI CTGGAG 2 cut(s) 515, 1300
BpuEI CTTGAG 3 cut(s) 1166, 1316, 1464
BpuMI CCSGG 3 cut(s) 377, 845, 929
BsaJI CCNNGG 6 cut(s) 720, 981, 1214, 1375, 1781, 1884
Bsc4I CCNNNNNNNGG 6 cut(s) 790, 829, 934, 1122, 1704, 2099
Bse21I CCTNAGG 2 cut(s) 797, 2096
Bse3DI GCAATG 3 cut(s) 28, 112, 1736
BseBI CCWGG 4 cut(s) 389, 721, 824, 1318
BseDI CCNNGG 6 cut(s) 720, 981, 1214, 1375, 1781, 1884
BseGI GGATG 9 cut(s) 273, 937, 1302, 1504, 1528, 1829, 2019, 2081, 2171
BseLI CCNNNNNNNGG 6 cut(s) 790, 829, 934, 1122, 1704, 2099
BseMI GCAATG 3 cut(s) 28, 112, 1736
BseMII CTCAG 6 cut(s) 768, 788, 1061, 1634, 2052, 2087
BsePI GCGCGC 1 cut(s) 580
BseXI GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
BseYI CCCAGC 1 cut(s) 576
BsgI GTGCAG 2 cut(s) 1401, 1905
Bsh1236I CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
Bsh1285I CGRYCG 1 cut(s) 592
BshFI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
BshNI GGYRCC 1 cut(s) 1588
BsiEI CGRYCG 1 cut(s) 592
BsiHKAI GWGCWC 3 cut(s) 156, 1048, 2037
BsiHKCI CYCGRG 2 cut(s) 401, 440
BsiSI CCGG 3 cut(s) 376, 844, 929
BslFI GGGAC 4 cut(s) 74, 550, 977, 1277
BslI CCNNNNNNNGG 6 cut(s) 790, 829, 934, 1122, 1704, 2099
BsmAI GTCTC 7 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200
BsmBI CGTCTC 1 cut(s) 631
BsmFI GGGAC 4 cut(s) 74, 550, 977, 1277
BsmI GAATGC 2 cut(s) 767, 918
BsnI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
BsoBI CYCGRG 2 cut(s) 401, 440
Bsp1286I GDGCHC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
Bsp143I GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
Bsp19I CCATGG 2 cut(s) 981, 1214
BspANI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
BspCNI CTCAG 6 cut(s) 767, 789, 1060, 1635, 2051, 2088
BspFNI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
BspHI TCATGA 1 cut(s) 216
BspLI GGNNCC 4 cut(s) 1198, 1590, 1933, 2168
BspMAI CTGCAG 1 cut(s) 1813
BspMI ACCTGC 3 cut(s) 1062, 1218, 1373
BspPI GGATC 1 cut(s) 127
BspQI GCTCTTC 1 cut(s) 1956
BspT107I GGYRCC 1 cut(s) 1588
BsrBI CCGCTC 1 cut(s) 38
BsrDI GCAATG 3 cut(s) 28, 112, 1736
BssECI CCNNGG 6 cut(s) 720, 981, 1214, 1375, 1781, 1884
BssHII GCGCGC 1 cut(s) 580
BssMI GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
BssT1I CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
Bst2UI CCWGG 4 cut(s) 389, 721, 824, 1318
Bst4CI ACNGT 7 cut(s) 817, 1040, 1268, 1457, 1845, 2116, 2286
Bst6I CTCTTC 4 cut(s) 704, 1443, 1956, 2103
BstAPI GCANNNNNTGC 1 cut(s) 1690
BstC8I GCNNGC 9 cut(s) 373, 454, 469, 582, 586, 1032, 1110, 1936, 1948
BstDEI CTNAG 7 cut(s) 754, 797, 1047, 1643, 1765, 2038, 2096
BstDSI CCRYGG 2 cut(s) 981, 1214
BstENI CCTNNNNNAGG 1 cut(s) 788
BstF5I GGATG 9 cut(s) 273, 937, 1302, 1504, 1528, 1829, 2019, 2081, 2171
BstFNI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
BstHHI GCGC 5 cut(s) 467, 582, 584, 1504, 2002
BstKTI GATC 6 cut(s) 135, 549, 573, 604, 1065, 2059
BstMAI GTCTC 7 cut(s) 631, 1130, 1463, 1717, 1834, 2105, 2200
BstMBI GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
BstMCI CGRYCG 1 cut(s) 592
BstNI CCWGG 4 cut(s) 389, 721, 824, 1318
BstNSI RCATGY 1 cut(s) 862
BstSCI CCNGG 7 cut(s) 375, 387, 719, 822, 843, 927, 1316
BstSFI CTRYAG 1 cut(s) 1809
BstUI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
BstV1I GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
BstX2I RGATCY 2 cut(s) 132, 570
BstXI CCANNNNNNTGG 2 cut(s) 1633, 1788
BstYI RGATCY 2 cut(s) 132, 570
Bsu36I CCTNAGG 2 cut(s) 797, 2096
BsuRI GGCC 5 cut(s) 719, 794, 822, 1364, 1776
BtgI CCRYGG 2 cut(s) 981, 1214
BtrI CACGTC 2 cut(s) 475, 688
BtsCI GGATG 9 cut(s) 273, 937, 1302, 1504, 1528, 1829, 2019, 2081, 2171
BtsI GCAGTG 1 cut(s) 1922
BtsIMutI CAGTG 2 cut(s) 813, 1922
BveI ACCTGC 3 cut(s) 1062, 1218, 1373
Cac8I GCNNGC 9 cut(s) 373, 454, 469, 582, 586, 1032, 1110, 1936, 1948
CciI TCATGA 1 cut(s) 216
CfoI GCGC 5 cut(s) 467, 582, 584, 1504, 2002
Cfr13I GGNCC 5 cut(s) 781, 793, 820, 1475, 1775
CseI GACGC 3 cut(s) 71, 130, 650
CsiI ACCWGGT 1 cut(s) 387
Csp6I GTAC 2 cut(s) 385, 1769
CviQI GTAC 2 cut(s) 385, 1769
DdeI CTNAG 7 cut(s) 754, 797, 1047, 1643, 1765, 2038, 2096
DpnI GATC 6 cut(s) 134, 548, 572, 603, 1064, 2058
DpnII GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
DrdI GACNNNNNNGTC 2 cut(s) 209, 350
DseDI GACNNNNNNGTC 2 cut(s) 209, 350
Eam1104I CTCTTC 4 cut(s) 704, 1443, 1956, 2103
EarI CTCTTC 4 cut(s) 704, 1443, 1956, 2103
EciI GGCGGA 4 cut(s) 187, 217, 436, 1105
Ecl136II GAGCTC 3 cut(s) 154, 1046, 2035
Eco130I CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
Eco147I AGGCCT 1 cut(s) 719
Eco24I GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
Eco47I GGWCC 2 cut(s) 781, 1475
Eco53kI GAGCTC 3 cut(s) 154, 1046, 2035
Eco57I CTGAAG 1 cut(s) 943
Eco81I CCTNAGG 2 cut(s) 797, 2096
Eco88I CYCGRG 2 cut(s) 401, 440
EcoICRI GAGCTC 3 cut(s) 154, 1046, 2035
EcoNI CCTNNNNNAGG 1 cut(s) 788
EcoO109I RGGNCCY 1 cut(s) 793
EcoRI GAATTC 2 cut(s) 952, 1370
EcoRII CCWGG 4 cut(s) 387, 719, 822, 1316
EcoT14I CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
EcoT38I GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
ErhI CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
Esp3I CGTCTC 1 cut(s) 631
FalI AAGNNNNNCTT 2 cut(s) 866, 898
FaqI GGGAC 4 cut(s) 74, 550, 977, 1277
FauI CCCGC 4 cut(s) 251, 461, 593, 719
FblI GTMKAC 2 cut(s) 393, 552
FokI GGATG 9 cut(s) 260, 944, 1309, 1511, 1535, 1816, 2026, 2068, 2158
FriOI GRGCYC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
FspBI CTAG 4 cut(s) 57, 1376, 1848, 2060
GlaI GCGC 5 cut(s) 466, 581, 583, 1503, 2001
GsaI CCCAGC 1 cut(s) 580
GsuI CTGGAG 2 cut(s) 515, 1300
HaeIII GGCC 5 cut(s) 719, 794, 822, 1364, 1776
HapII CCGG 3 cut(s) 376, 844, 929
HgaI GACGC 3 cut(s) 71, 130, 650
HhaI GCGC 5 cut(s) 467, 582, 584, 1504, 2002
Hin6I GCGC 5 cut(s) 465, 580, 582, 1502, 2000
HinP1I GCGC 5 cut(s) 465, 580, 582, 1502, 2000
HincII GTYRAC 3 cut(s) 161, 394, 553
HindII GTYRAC 3 cut(s) 161, 394, 553
HindIII AAGCTT 3 cut(s) 944, 1014, 1168
HpaII CCGG 3 cut(s) 376, 844, 929
HphI GGTGA 7 cut(s) 85, 475, 481, 596, 1315, 1370, 1804
Hpy166II GTNNAC 6 cut(s) 161, 262, 394, 478, 553, 1312
Hpy188I TCNGA 9 cut(s) 319, 343, 601, 769, 1050, 1255, 1574, 2137, 2152
Hpy188III TCNNGA 8 cut(s) 217, 1183, 1333, 1520, 1550, 1848, 2011, 2060
Hpy8I GTNNAC 6 cut(s) 161, 262, 394, 478, 553, 1312
HpyAV CCTTC 8 cut(s) 62, 139, 517, 967, 1157, 1294, 1420, 2190
HpyCH4III ACNGT 7 cut(s) 817, 1040, 1268, 1457, 1845, 2116, 2286
HpyCH4IV ACGT 4 cut(s) 459, 474, 687, 771
HpyCH4V TGCA 9 cut(s) 899, 1382, 1736, 1741, 1811, 1922, 1946, 2266, 2276
HpyF3I CTNAG 7 cut(s) 754, 797, 1047, 1643, 1765, 2038, 2096
HpySE526I ACGT 4 cut(s) 459, 474, 687, 771
HspAI GCGC 5 cut(s) 465, 580, 582, 1502, 2000
Kzo9I GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
LguI GCTCTTC 1 cut(s) 1956
LmnI GCTCC 9 cut(s) 35, 151, 159, 770, 1043, 1202, 1636, 1931, 2172
Lsp1109I GCAGC 9 cut(s) 404, 637, 1107, 1327, 1524, 1577, 1677, 1686, 1906
LweI GCATC 6 cut(s) 99, 366, 908, 1075, 1489, 2062
MabI ACCWGGT 1 cut(s) 387
MaeI CTAG 4 cut(s) 57, 1376, 1848, 2060
MaeII ACGT 4 cut(s) 459, 474, 687, 771
MaeIII GTNAC 3 cut(s) 811, 1824, 1972
MalI GATC 6 cut(s) 134, 548, 572, 603, 1064, 2058
MbiI CCGCTC 1 cut(s) 38
MboI GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
MflI RGATCY 2 cut(s) 132, 570
MhlI GDGCHC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
MmeI TCCRAC 5 cut(s) 366, 639, 792, 951, 2268
MroXI GAANNNNTTC 4 cut(s) 837, 956, 1190, 2223
MseI TTAA 4 cut(s) 1350, 1577, 1968, 2347
MslI CAYNNNNRTG 1 cut(s) 986
MspA1I CMGCKG 4 cut(s) 1098, 1340, 1515, 1568
MspI CCGG 3 cut(s) 376, 844, 929
MspR9I CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
Mva1269I GAATGC 2 cut(s) 767, 918
MvaI CCWGG 4 cut(s) 389, 721, 824, 1318
MvnI CGCG 6 cut(s) 65, 124, 183, 465, 582, 588
NciI CCSGG 3 cut(s) 377, 845, 929
NcoI CCATGG 2 cut(s) 981, 1214
NdeII GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
NlaIV GGNNCC 4 cut(s) 1198, 1590, 1933, 2168
NmeAIII GCCGAG 1 cut(s) 1144
NmuCI GTSAC 2 cut(s) 811, 1972
NspI RCATGY 1 cut(s) 862
PaeR7I CTCGAG 1 cut(s) 440
PagI TCATGA 1 cut(s) 216
PaqCI CACCTGC 1 cut(s) 1373
PauI GCGCGC 1 cut(s) 580
PceI AGGCCT 1 cut(s) 719
PciSI GCTCTTC 1 cut(s) 1956
PcsI WCGNNNNNNNCGW 3 cut(s) 198, 399, 663
PctI GAATGC 2 cut(s) 767, 918
PdmI GAANNNNTTC 4 cut(s) 837, 956, 1190, 2223
PshBI ATTAAT 1 cut(s) 1350
Psp124BI GAGCTC 3 cut(s) 156, 1048, 2037
Psp6I CCWGG 4 cut(s) 387, 719, 822, 1316
PspFI CCCAGC 1 cut(s) 576
PspGI CCWGG 4 cut(s) 387, 719, 822, 1316
PspN4I GGNNCC 4 cut(s) 1198, 1590, 1933, 2168
PspPI GGNCC 5 cut(s) 781, 793, 820, 1475, 1775
PspXI VCTCGAGB 1 cut(s) 440
PstI CTGCAG 1 cut(s) 1813
PsuI RGATCY 2 cut(s) 132, 570
PteI GCGCGC 1 cut(s) 580
PvuII CAGCTG 3 cut(s) 1340, 1515, 1568
RsaI GTAC 2 cut(s) 386, 1770
RsaNI GTAC 2 cut(s) 385, 1769
RseI CAYNNNNRTG 1 cut(s) 986
SacI GAGCTC 3 cut(s) 156, 1048, 2037
SalI GTCGAC 2 cut(s) 392, 551
SapI GCTCTTC 1 cut(s) 1956
SaqAI TTAA 4 cut(s) 1350, 1577, 1968, 2347
Sau3AI GATC 6 cut(s) 132, 546, 570, 601, 1062, 2056
Sau96I GGNCC 5 cut(s) 781, 793, 820, 1475, 1775
ScaI AGTACT 1 cut(s) 1770
ScrFI CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
SduI GDGCHC 6 cut(s) 156, 1048, 1711, 1855, 1892, 2037
SexAI ACCWGGT 1 cut(s) 387
SfaNI GCATC 6 cut(s) 99, 366, 908, 1075, 1489, 2062
SfcI CTRYAG 1 cut(s) 1809
Sfr274I CTCGAG 1 cut(s) 440
SinI GGWCC 2 cut(s) 781, 1475
SlaI CTCGAG 1 cut(s) 440
SmiMI CAYNNNNRTG 1 cut(s) 986
SmlI CTYRAG 4 cut(s) 440, 1181, 1331, 1479
SmoI CTYRAG 4 cut(s) 440, 1181, 1331, 1479
SseBI AGGCCT 1 cut(s) 719
SspI AATATT 1 cut(s) 1348
SspMI CTAG 4 cut(s) 57, 1376, 1848, 2060
SstI GAGCTC 3 cut(s) 156, 1048, 2037
StuI AGGCCT 1 cut(s) 719
StyD4I CCNGG 7 cut(s) 375, 387, 719, 822, 843, 927, 1316
StyI CCWWGG 5 cut(s) 981, 1214, 1375, 1781, 1884
TaaI ACNGT 7 cut(s) 817, 1040, 1268, 1457, 1845, 2116, 2286
TaiI ACGT 4 cut(s) 462, 477, 690, 774
TaqII GACCGA 1 cut(s) 769
TatI WGTACW 1 cut(s) 1768
TauI GCSGC 6 cut(s) 41, 44, 47, 452, 918, 1101
Tru1I TTAA 4 cut(s) 1350, 1577, 1968, 2347
Tru9I TTAA 4 cut(s) 1350, 1577, 1968, 2347
TscAI CASTG 2 cut(s) 820, 1929
TseFI GTSAC 2 cut(s) 811, 1972
TseI GCWGC 9 cut(s) 417, 650, 1095, 1340, 1512, 1565, 1674, 1690, 1919
Tsp45I GTSAC 2 cut(s) 811, 1972
TspDTI ATGAA 9 cut(s) 233, 1014, 1157, 1313, 1705, 1812, 2171, 2216, 2318
TspGWI ACGGA 5 cut(s) 146, 247, 340, 378, 2198
TspRI CASTG 2 cut(s) 820, 1929
VpaK11BI GGWCC 2 cut(s) 781, 1475
VspI ATTAAT 1 cut(s) 1350
XagI CCTNNNNNAGG 1 cut(s) 788
XapI RAATTY 3 cut(s) 952, 1370, 2270
XbaI TCTAGA 2 cut(s) 1847, 2059
XceI RCATGY 1 cut(s) 862
XcmI CCANNNNNNNNNTGG 1 cut(s) 988
XhoI CTCGAG 1 cut(s) 440
XmaJI CCTAGG 1 cut(s) 1375
XmiI GTMKAC 2 cut(s) 393, 552
XmnI GAANNNNTTC 4 cut(s) 837, 956, 1190, 2223
XspI CTAG 4 cut(s) 57, 1376, 1848, 2060
ZrmI AGTACT 1 cut(s) 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.