Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0005295

Physical Location & Seq

Genomic Coordinates Reverse (-)

20327898 .. 20331556

Gene Structure 3659 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g20610.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGAGAGTTAATTCCGGCGATGCCCTCAGCGGCGCCGCCACCAGTTCCTTCGCCACTGCAGCCGCCGCTTCTCGAGATGCCGAGTCCCTCTTCCGCTCCAAACCCATTTCCGAGATCCGCACCGTCGAGTCCACCACCCGCACCCAGATCGAGTCCAAGAAGGAGGAGCTCCGTCAACTCGTCGGCACCCGCTACCGGGATCTCATCGACTCAGCCGATTCCATCGTTCTCATGAAGCGCTCCTCCCACTCCATCTCCCAAAACCTCTCCTCCGTCCACGCATCCATCAATTCCCTCTCCTCCGCCTCCTCCGCCGACCCTCCCGATCCCTCCCGCCACGACCCGACCCGCCACCGCATCTACGGCATTGCCTGCCGAGTCAAGTACCTCGTTGACACTCCCGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTTCTCGAGTCCGCCGCGCGCTACGTCCGCGCCAGCCACGTGCACTCCATCCTCGCCCTCCCCGGTCAGGTGCGCTTCCTCTCCAACTTCCCTCTCCTTCAGCACCAGTGGCAGATCGTCGACAGCTTCAAGTCCCAGATCTCTCAGCGCGCCCGCGACCGCCTCTTCGATCGAGAGCTCCGATTGCCCATCTCCTCCTACGCCGACGCCTTGGCCGCCGTCGCTTTGATCGACGACCTCCGGCCCGAGCACGTCCTCTCCCTCTTCCTCGACAGTCGCAAGTCGTGGGTTTCCGGGATACTCAACGCTTGTCGTCCCGATGCTCAGTGCTCCGACGTCGTTTCAGTGCTATGCGAGGCTCTGAGGGTGATTCAGGTGACTGTGGGGCAGGTTGGGGAGCTCTTCTTGCGCGTGTTGAACGACATGCCGTTGTTCTACAAGGTGGTGTTGGGTTGCCCTCCTGCATCCCAACTGTTCGGTGGAATTCCCAATCCAGATGAGGAGGTCAAGCTTTGGAATTCATTTCGGGAGAAGCTCGAGTCCGCCATGGGAATGCTGGACAAGAATTACATTGCCAAGGCTTGTTGCTCTTGGCTTAACGACTGCGGAGGCCAGATGGTGGATAGGATCAACGGGCGGTTCCTCATCGATGCAATTGGCAGTGGCCATGAGCTCGCCACGGCTGAGAAATTGATTAGGGAGACGATGAACAGCAAAGAGGTATTAGAAGGGAGCTTGGAGTGGCTCAAGAACGTTTTCGGGTCTAACATTGCCCTGCCATGGAGTAGAATGAGTGAACTTGTTCTCGGAGACGATTCAGATCTCTGGGACAGTATCTTCGAACCTGCGTTTGTCGCCAGGATGAAGGTGATTGTGGCATACAGGTTCGAGGATCTCATGAAGGCAGTGAACATTAAGGATGGCGAACCCATTGATTTCCTTGGTGCTGGTGGTGGAGTTTGGTTTGTAGAAACCAAATCGAATAATGCTAAGAAAGGTACTACTAGTGCTTTGCCTTGTGAAGAGAATTGTCTCAATTTCTATTTTGGTCCTCAAGTGAGTGGAATTCGGGATGCCGTGGATAGTAGCTGTAAGGATGTTCTTGATGACATGCTGTGTTTCTTAGAATCGCCAAAGGCAGCTCTTAGGTTAAAGGATCTGGCACCGTATCTACAAGATAAGTGTTGCCTGACCATTTCCAATATATTGGTGCAACTGACTAGTGAGCTTGATAATTTGGAAATTGGCAAAGACACGCAAGGGCCAATAACCGTTGACAGGGCACTTTTCATTGGGAGACTCCTGTTTGCATTGCAGAGCCACTCCAAACACATCCCCATTATTCTTGGCCCTCCAAGGTCTTGGGTAAATGTAACAGGTTCTGTAGTTTTCGATAAGTTCCCAGCCATGTCAAGACAATCTAGAGCTCCCACAGATTCTCCAGTGCTTGATAGCCCCTCGGGTTCTAAAAGGCACACTTCATCTGCTACTGCTGCATTGCTTGGAGCCAGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATTCAACTATGAAAGATCTCCGCATCCGAGCGCATGGTTTGTGGATGTCGTGGTTGTGCGATGAGCTTTCAGTTATTCTTTCCTGTGATCTTCAAAAAGATTATGCTTTGTCATCATCAACACCTCTGAGGGGTTGGGAAGAGACTGTTGTTAAGCAAGAGCAGTCTGATGATAACCAGTCAGACATGAGAATATGGCTCCCATGCATGCCTTCTCTCTATATAGTCTCATTTCTATTTCGTATATGTGAAGAAGTTCATCGAATTGGAGGTCATGTTCTTGACAAAACAATTCTGCAAAAGTTTGCATTAAGACTGCTGGAAAAGGTCATTGGTATTTATGGGGACTTCCTTTCTACAGTAGAGGCTGGTGGATCGATCAAGTGTCAGAGAAAGGAGTTTTGCAAGTTCTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps51

Protein Analysis

798

Amino Acids

88.43

Weight (kDa)

5.93

Isoelectric Point (pI)

48.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16300 AT5G16300 AT5G16300 AT5G16300
fragaria_vesca	FvH4_3g34230 FvH4_5g28760 FvH4_5g28760 FvH4_5g28760 FvH4_5g28760
malus_domestica	MD08G1237500.v1.1 MD15G1429400.v1.1
prunus_persica	Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1
pyrus_communis	pycom08g20610 pycom15g38000
rosa_chinensis	RchiOBHm_Chr7g0220971
rosa_laevigata	RLG00000002190
rosa_multiflora	Rmu_sc0002105.1_g000025
rosa_roxburghii	Rroxscaffold_3G00238840
rosa_rugosa	Rorug07G0198700 Rorug07G0198800
rosa_samantha	Rh7AG338900 Rh7BG329700 Rh7CG357000 Rh7DG337700
rosa_wichuraiana	Rw7G028830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	774
Acc36I	ACCTGC	2 cut(s)	814, 1288
AccB1I	GGYRCC	3 cut(s)	32, 185, 1597
AccB7I	CCANNNNNTGG	1 cut(s)	1054
AccBSI	CCGCTC	1 cut(s)	96
AccI	GTMKAC	1 cut(s)	555
AccII	CGCG	6 cut(s)	452, 454, 465, 585, 591, 846
AclI	AACGTT	1 cut(s)	1188
AclWI	GGATC	7 cut(s)	109, 207, 320, 1070, 1335, 1599, 2359
AcoI	YGGCCR	2 cut(s)	648, 1099
AcsI	RAATTY	3 cut(s)	918, 952, 1500
AcuI	CTGAAG	1 cut(s)	518
AcvI	CACGTG	1 cut(s)	475
AcyI	GRCGYC	3 cut(s)	33, 642, 771
AfaI	GTAC	2 cut(s)	386, 1435
AfeI	AGCGCT	1 cut(s)	239
AfiI	CCNNNNNNNGG	7 cut(s)	195, 196, 502, 1054, 1215, 1713, 2108
AgsI	TTSAA	5 cut(s)	565, 853, 1970, 1983, 2072
AhlI	ACTAGT	2 cut(s)	1439, 1655
AjiI	CACGTC	1 cut(s)	688
AjnI	CCWGG	1 cut(s)	1292
AjuI	GAANNNNNNNTTGG	2 cut(s)	2292, 2324
AloI	GAACNNNNNNTCC	2 cut(s)	2238, 2270
Alw21I	GWGCWC	8 cut(s)	171, 480, 615, 687, 767, 837, 1110, 1864
Alw26I	GTCTC	6 cut(s)	1130, 1239, 1472, 1726, 2114, 2209
Alw44I	GTGCAC	1 cut(s)	476
AlwI	GGATC	7 cut(s)	109, 207, 320, 1070, 1335, 1599, 2359
AlwNI	CAGNNNCTG	1 cut(s)	1817
Ama87I	CYCGRG	6 cut(s)	72, 401, 440, 680, 971, 1894
Aor51HI	AGCGCT	1 cut(s)	239
AoxI	GGCC	6 cut(s)	648, 677, 1045, 1099, 1697, 1783
ApaLI	GTGCAC	1 cut(s)	476
ApeKI	GCWGC	4 cut(s)	59, 417, 1574, 1928
ApoI	RAATTY	3 cut(s)	918, 952, 1500
ArsI	GACNNNNNNTTYG	6 cut(s)	584, 616, 1256, 1288, 2233, 2265
Asp700I	GAANNNNTTC	3 cut(s)	1190, 1236, 2232
AspS9I	GGNCC	4 cut(s)	678, 1484, 1697, 1784
AsuC2I	CCSGG	3 cut(s)	197, 498, 730
AsuHPI	GGTGA	3 cut(s)	814, 823, 1315
AsuII	TTCGAA	1 cut(s)	1275
AvaI	CYCGRG	6 cut(s)	72, 401, 440, 680, 971, 1894
AvaII	GGWCC	1 cut(s)	1484
BaeGI	GKGCMC	2 cut(s)	480, 1720
BalI	TGGCCA	1 cut(s)	1101
BanI	GGYRCC	3 cut(s)	32, 185, 1597
BanII	GRGCYC	5 cut(s)	171, 615, 837, 1110, 1864
BbrPI	CACGTG	1 cut(s)	475
Bbv12I	GWGCWC	8 cut(s)	171, 480, 615, 687, 767, 837, 1110, 1864
BbvCI	CCTCAGC	1 cut(s)	26
BbvI	GCAGC	4 cut(s)	71, 404, 1586, 1915
BccI	CCATC	7 cut(s)	230, 260, 293, 491, 632, 1045, 1349
BceAI	ACGGC	5 cut(s)	379, 638, 847, 1131, 1496
BcgI	CGANNNNNNTGC	2 cut(s)	130, 164
BciT130I	CCWGG	1 cut(s)	1294
BciVI	GTATCC	1 cut(s)	726
BcnI	CCSGG	3 cut(s)	197, 498, 730
BcoDI	GTCTC	6 cut(s)	1130, 1239, 1472, 1726, 2114, 2209
BcuI	ACTAGT	2 cut(s)	1439, 1655
BfaI	CTAG	3 cut(s)	1440, 1656, 1857
BfmI	CTRYAG	3 cut(s)	57, 1818, 2334
BfoI	RGCGCY	2 cut(s)	36, 241
BfuAI	ACCTGC	2 cut(s)	814, 1288
BfuI	GTATCC	1 cut(s)	726
BglII	AGATCT	3 cut(s)	573, 1255, 1993
Bme1390I	CCNGG	4 cut(s)	197, 498, 730, 1294
Bme18I	GGWCC	1 cut(s)	1484
BmeT110I	CYCGRG	6 cut(s)	72, 401, 440, 680, 971, 1894
BmgBI	CACGTC	1 cut(s)	688
BmgT120I	GGNCC	4 cut(s)	678, 1484, 1697, 1784
BmiI	GGNNCC	6 cut(s)	34, 187, 1076, 1599, 1942, 2177
BmrFI	CCNGG	4 cut(s)	197, 498, 730, 1294
BmsI	GCATC	9 cut(s)	10, 67, 290, 366, 745, 908, 1075, 1498, 2010
BpmI	CTGGAG	1 cut(s)	1860
Bpu10I	CCTNAGC	1 cut(s)	26
Bpu14I	TTCGAA	1 cut(s)	1275
BpuEI	CTTGAG	2 cut(s)	1166, 1473
BpuMI	CCSGG	3 cut(s)	197, 498, 730
Bsa29I	ATCGAT	2 cut(s)	1083, 2354
BsaAI	YACGTR	1 cut(s)	475
BsaBI	GATNNNNATC	1 cut(s)	1254
BsaHI	GRCGYC	3 cut(s)	33, 642, 771
Bsc4I	CCNNNNNNNGG	7 cut(s)	195, 196, 502, 1054, 1215, 1713, 2108
Bse1I	ACTGG	4 cut(s)	42, 541, 1877, 2155
Bse3DI	GCAATG	5 cut(s)	366, 1005, 1203, 1745, 1931
Bse8I	GATNNNNATC	1 cut(s)	1254
BseBI	CCWGG	1 cut(s)	1294
BseCI	ATCGAT	2 cut(s)	1083, 2354
BseJI	GATNNNNATC	1 cut(s)	1254
BseLI	CCNNNNNNNGG	7 cut(s)	195, 196, 502, 1054, 1215, 1713, 2108
BseMI	GCAATG	5 cut(s)	366, 1005, 1203, 1745, 1931
BseMII	CTCAG	7 cut(s)	40, 225, 593, 773, 788, 1110, 2096
BseNI	ACTGG	4 cut(s)	42, 541, 1877, 2155
BsePI	GCGCGC	2 cut(s)	452, 583
BseRI	GAGGAG	7 cut(s)	179, 232, 259, 289, 298, 619, 950
BseSI	GKGCMC	2 cut(s)	480, 1720
BseXI	GCAGC	4 cut(s)	71, 404, 1586, 1915
BseYI	CCCAGC	1 cut(s)	1837
Bsh1236I	CGCG	6 cut(s)	452, 454, 465, 585, 591, 846
Bsh1285I	CGRYCG	2 cut(s)	595, 607
BshFI	GGCC	6 cut(s)	650, 679, 1047, 1101, 1699, 1785
BshNI	GGYRCC	3 cut(s)	32, 185, 1597
BshVI	ATCGAT	2 cut(s)	1083, 2354
BsiEI	CGRYCG	2 cut(s)	595, 607
BsiHKAI	GWGCWC	8 cut(s)	171, 480, 615, 687, 767, 837, 1110, 1864
BsiHKCI	CYCGRG	6 cut(s)	72, 401, 440, 680, 971, 1894
BsiSI	CCGG	5 cut(s)	15, 196, 498, 676, 729
BslFI	GGGAC	5 cut(s)	70, 553, 735, 1277, 2336
BslI	CCNNNNNNNGG	7 cut(s)	195, 196, 502, 1054, 1215, 1713, 2108
BsmAI	GTCTC	6 cut(s)	1130, 1239, 1472, 1726, 2114, 2209
BsmBI	CGTCTC	2 cut(s)	1130, 1239
BsmFI	GGGAC	5 cut(s)	70, 553, 735, 1277, 2336
BsmI	GAATGC	1 cut(s)	993
BsnI	GGCC	6 cut(s)	650, 679, 1047, 1101, 1699, 1785
BsoBI	CYCGRG	6 cut(s)	72, 401, 440, 680, 971, 1894
Bsp119I	TTCGAA	1 cut(s)	1275
Bsp1286I	GDGCHC	9 cut(s)	171, 480, 615, 687, 767, 837, 1110, 1720, 1864
Bsp19I	CCATGG	2 cut(s)	981, 1214
BspANI	GGCC	6 cut(s)	650, 679, 1047, 1101, 1699, 1785
BspCNI	CTCAG	7 cut(s)	39, 224, 592, 772, 789, 1111, 2097
BspDI	ATCGAT	2 cut(s)	1083, 2354
BspFNI	CGCG	6 cut(s)	452, 454, 465, 585, 591, 846
BspHI	TCATGA	2 cut(s)	231, 1332
BspLI	GGNNCC	6 cut(s)	34, 187, 1076, 1599, 1942, 2177
BspMAI	CTGCAG	1 cut(s)	61
BspMI	ACCTGC	2 cut(s)	814, 1288
BspPI	GGATC	7 cut(s)	109, 207, 320, 1070, 1335, 1599, 2359
BspQI	GCTCTTC	2 cut(s)	842, 1965
BspT104I	TTCGAA	1 cut(s)	1275
BspT107I	GGYRCC	3 cut(s)	32, 185, 1597
BsrBI	CCGCTC	1 cut(s)	96
BsrDI	GCAATG	5 cut(s)	366, 1005, 1203, 1745, 1931
BsrI	ACTGG	4 cut(s)	42, 541, 1877, 2155
BssHII	GCGCGC	2 cut(s)	452, 583
BssNI	GRCGYC	3 cut(s)	33, 642, 771
BssT1I	CCWWGG	6 cut(s)	645, 981, 1011, 1214, 1375, 1790
Bst2UI	CCWGG	1 cut(s)	1294
Bst4CI	ACNGT	9 cut(s)	124, 710, 817, 909, 1268, 1602, 1708, 2125, 2338
Bst6I	CTCTTC	7 cut(s)	95, 605, 704, 842, 1452, 1965, 2112
BstACI	GRCGYC	3 cut(s)	33, 642, 771
BstAPI	GCANNNNNTGC	1 cut(s)	372
BstBAI	YACGTR	1 cut(s)	475
BstBI	TTCGAA	1 cut(s)	1275
BstC8I	GCNNGC	9 cut(s)	373, 454, 469, 585, 589, 1110, 1945, 1957, 2186
BstDSI	CCRYGG	4 cut(s)	981, 1113, 1214, 1512
BstFNI	CGCG	6 cut(s)	452, 454, 465, 585, 591, 846
BstH2I	RGCGCY	2 cut(s)	36, 241
BstMAI	GTCTC	6 cut(s)	1130, 1239, 1472, 1726, 2114, 2209
BstMCI	CGRYCG	2 cut(s)	595, 607
BstNI	CCWGG	1 cut(s)	1294
BstNSI	RCATGY	3 cut(s)	862, 1549, 2188
BstSCI	CCNGG	4 cut(s)	195, 496, 728, 1292
BstSFI	CTRYAG	3 cut(s)	57, 1818, 2334
BstSLI	GKGCMC	2 cut(s)	480, 1720
BstUI	CGCG	6 cut(s)	452, 454, 465, 585, 591, 846
BstV1I	GCAGC	4 cut(s)	71, 404, 1586, 1915
BstX2I	RGATCY	7 cut(s)	114, 199, 573, 1255, 1327, 1591, 1993
BstXI	CCANNNNNNTGG	2 cut(s)	1642, 1797
BstYI	RGATCY	7 cut(s)	114, 199, 573, 1255, 1327, 1591, 1993
Bsu15I	ATCGAT	2 cut(s)	1083, 2354
BsuI	GTATCC	1 cut(s)	726
BsuRI	GGCC	6 cut(s)	650, 679, 1047, 1101, 1699, 1785
BsuTUI	ATCGAT	2 cut(s)	1083, 2354
BtgI	CCRYGG	4 cut(s)	981, 1113, 1214, 1512
BtgZI	GCGATG	2 cut(s)	33, 2052
BtrI	CACGTC	1 cut(s)	688
BtsI	GCAGTG	3 cut(s)	54, 1102, 1347
BtsIMutI	CAGTG	7 cut(s)	54, 548, 767, 786, 1102, 1347, 1884
BveI	ACCTGC	2 cut(s)	814, 1288
Cac8I	GCNNGC	9 cut(s)	373, 454, 469, 585, 589, 1110, 1945, 1957, 2186
CaiI	CAGNNNCTG	1 cut(s)	1817
CciI	TCATGA	2 cut(s)	231, 1332
Cfr13I	GGNCC	4 cut(s)	678, 1484, 1697, 1784
ClaI	ATCGAT	2 cut(s)	1083, 2354
CseI	GACGC	1 cut(s)	650
Csp6I	GTAC	2 cut(s)	385, 1434
CviQI	GTAC	2 cut(s)	385, 1434
DinI	GGCGCC	1 cut(s)	34
EaeI	YGGCCR	2 cut(s)	648, 1099
Eam1104I	CTCTTC	7 cut(s)	95, 605, 704, 842, 1452, 1965, 2112
EarI	CTCTTC	7 cut(s)	95, 605, 704, 842, 1452, 1965, 2112
EciI	GGCGGA	4 cut(s)	292, 301, 436, 967
Ecl136II	GAGCTC	5 cut(s)	169, 613, 835, 1108, 1862
Eco130I	CCWWGG	6 cut(s)	645, 981, 1011, 1214, 1375, 1790
Eco24I	GRGCYC	5 cut(s)	171, 615, 837, 1110, 1864
Eco47I	GGWCC	1 cut(s)	1484
Eco47III	AGCGCT	1 cut(s)	239
Eco53kI	GAGCTC	5 cut(s)	169, 613, 835, 1108, 1862
Eco57I	CTGAAG	1 cut(s)	518
Eco72I	CACGTG	1 cut(s)	475
Eco88I	CYCGRG	6 cut(s)	72, 401, 440, 680, 971, 1894
EcoICRI	GAGCTC	5 cut(s)	169, 613, 835, 1108, 1862
EcoRI	GAATTC	3 cut(s)	918, 952, 1500
EcoRII	CCWGG	1 cut(s)	1292
EcoT14I	CCWWGG	6 cut(s)	645, 981, 1011, 1214, 1375, 1790
EcoT22I	ATGCAT	1 cut(s)	2186
EcoT38I	GRGCYC	5 cut(s)	171, 615, 837, 1110, 1864
EgeI	GGCGCC	1 cut(s)	34
EheI	GGCGCC	1 cut(s)	34
ErhI	CCWWGG	6 cut(s)	645, 981, 1011, 1214, 1375, 1790
Esp3I	CGTCTC	2 cut(s)	1130, 1239
FalI	AAGNNNNNCTT	2 cut(s)	1897, 1929
FaqI	GGGAC	5 cut(s)	70, 553, 735, 1277, 2336
FauI	CCCGC	5 cut(s)	146, 197, 341, 356, 596
FblI	GTMKAC	1 cut(s)	555
FriOI	GRGCYC	5 cut(s)	171, 615, 837, 1110, 1864
FspBI	CTAG	3 cut(s)	1440, 1656, 1857
GsaI	CCCAGC	1 cut(s)	1841
GsuI	CTGGAG	1 cut(s)	1860
HaeII	RGCGCY	2 cut(s)	36, 241
HaeIII	GGCC	6 cut(s)	650, 679, 1047, 1101, 1699, 1785
HapII	CCGG	5 cut(s)	15, 196, 498, 676, 729
HgaI	GACGC	1 cut(s)	650
Hin1I	GRCGYC	3 cut(s)	33, 642, 771
HincII	GTYRAC	4 cut(s)	176, 394, 556, 1711
HindII	GTYRAC	4 cut(s)	176, 394, 556, 1711
HindIII	AAGCTT	1 cut(s)	944
HpaII	CCGG	5 cut(s)	15, 196, 498, 676, 729
HphI	GGTGA	3 cut(s)	814, 823, 1315
Hpy166II	GTNNAC	9 cut(s)	132, 176, 277, 394, 478, 556, 1232, 1345, 1711
Hpy8I	GTNNAC	9 cut(s)	132, 176, 277, 394, 478, 556, 1232, 1345, 1711
Hpy99I	CGWCG	9 cut(s)	128, 185, 428, 557, 644, 659, 671, 773, 776
HpyAV	CCTTC	7 cut(s)	58, 154, 542, 1157, 1294, 1330, 2199
HpyCH4III	ACNGT	9 cut(s)	124, 710, 817, 909, 1268, 1602, 1708, 2125, 2338
HpyCH4IV	ACGT	5 cut(s)	459, 474, 687, 771, 1188
HpySE526I	ACGT	5 cut(s)	459, 474, 687, 771, 1188
Hsp92I	GRCGYC	3 cut(s)	33, 642, 771
KasI	GGCGCC	1 cut(s)	32
LguI	GCTCTTC	2 cut(s)	842, 1965
Lsp1109I	GCAGC	4 cut(s)	71, 404, 1586, 1915
LweI	GCATC	9 cut(s)	10, 67, 290, 366, 745, 908, 1075, 1498, 2010
MaeI	CTAG	3 cut(s)	1440, 1656, 1857
MaeII	ACGT	5 cut(s)	459, 474, 687, 771, 1188
MaeIII	GTNAC	2 cut(s)	811, 1807
MbiI	CCGCTC	1 cut(s)	96
MfeI	CAATTG	1 cut(s)	1089
MflI	RGATCY	7 cut(s)	114, 199, 573, 1255, 1327, 1591, 1993
MhlI	GDGCHC	9 cut(s)	171, 480, 615, 687, 767, 837, 1110, 1720, 1864
MlsI	TGGCCA	1 cut(s)	1101
MluNI	TGGCCA	1 cut(s)	1101
Mly113I	GGCGCC	1 cut(s)	33
MlyI	GAGTC	9 cut(s)	92, 137, 161, 203, 387, 437, 452, 983, 1728
MmeI	TCCRAC	2 cut(s)	543, 792
Mox20I	TGGCCA	1 cut(s)	1101
Mph1103I	ATGCAT	1 cut(s)	2186
MroXI	GAANNNNTTC	3 cut(s)	1190, 1236, 2232
MscI	TGGCCA	1 cut(s)	1101
MseI	TTAA	7 cut(s)	9, 1032, 1350, 1586, 1977, 2130, 2288
MslI	CAYNNNNRTG	1 cut(s)	986
Msp20I	TGGCCA	1 cut(s)	1101
MspA1I	CMGCKG	1 cut(s)	30
MspI	CCGG	5 cut(s)	15, 196, 498, 676, 729
MspR9I	CCNGG	4 cut(s)	197, 498, 730, 1294
MunI	CAATTG	1 cut(s)	1089
Mva1269I	GAATGC	1 cut(s)	993
MvaI	CCWGG	1 cut(s)	1294
MvnI	CGCG	6 cut(s)	452, 454, 465, 585, 591, 846
NarI	GGCGCC	1 cut(s)	33
NciI	CCSGG	3 cut(s)	197, 498, 730
NcoI	CCATGG	2 cut(s)	981, 1214
NlaIV	GGNNCC	6 cut(s)	34, 187, 1076, 1599, 1942, 2177
NmeAIII	GCCGAG	2 cut(s)	106, 401
NmuCI	GTSAC	1 cut(s)	811
NsiI	ATGCAT	1 cut(s)	2186
NspI	RCATGY	3 cut(s)	862, 1549, 2188
NspV	TTCGAA	1 cut(s)	1275
PaeI	GCATGC	1 cut(s)	2188
PaeR7I	CTCGAG	3 cut(s)	72, 440, 971
PagI	TCATGA	2 cut(s)	231, 1332
PauI	GCGCGC	2 cut(s)	452, 583
PciSI	GCTCTTC	2 cut(s)	842, 1965
PcsI	WCGNNNNNNNCGW	3 cut(s)	213, 613, 663
PctI	GAATGC	1 cut(s)	993
PdmI	GAANNNNTTC	3 cut(s)	1190, 1236, 2232
PfeI	GAWTC	5 cut(s)	218, 805, 1250, 1562, 1871
PflMI	CCANNNNNTGG	1 cut(s)	1054
PfoI	TCCNGGA	1 cut(s)	728
Ple19I	CGATCG	1 cut(s)	607
PleI	GAGTC	9 cut(s)	91, 136, 160, 203, 386, 436, 451, 982, 1728
PluTI	GGCGCC	1 cut(s)	36
PmaCI	CACGTG	1 cut(s)	475
PmlI	CACGTG	1 cut(s)	475
PpsI	GAGTC	9 cut(s)	91, 136, 160, 203, 386, 436, 451, 982, 1728
Ppu21I	YACGTR	1 cut(s)	475
Psp124BI	GAGCTC	5 cut(s)	171, 615, 837, 1110, 1864
Psp1406I	AACGTT	1 cut(s)	1188
Psp6I	CCWGG	1 cut(s)	1292
PspCI	CACGTG	1 cut(s)	475
PspFI	CCCAGC	1 cut(s)	1837
PspGI	CCWGG	1 cut(s)	1292
PspN4I	GGNNCC	6 cut(s)	34, 187, 1076, 1599, 1942, 2177
PspPI	GGNCC	4 cut(s)	678, 1484, 1697, 1784
PspXI	VCTCGAGB	1 cut(s)	971
PstI	CTGCAG	1 cut(s)	61
PstNI	CAGNNNCTG	1 cut(s)	1817
PsuI	RGATCY	7 cut(s)	114, 199, 573, 1255, 1327, 1591, 1993
PteI	GCGCGC	2 cut(s)	452, 583
PvuI	CGATCG	1 cut(s)	607
RsaI	GTAC	2 cut(s)	386, 1435
RsaNI	GTAC	2 cut(s)	385, 1434
RseI	CAYNNNNRTG	1 cut(s)	986
SacI	GAGCTC	5 cut(s)	171, 615, 837, 1110, 1864
SalI	GTCGAC	1 cut(s)	554
SapI	GCTCTTC	2 cut(s)	842, 1965
SaqAI	TTAA	7 cut(s)	9, 1032, 1350, 1586, 1977, 2130, 2288
Sau96I	GGNCC	4 cut(s)	678, 1484, 1697, 1784
SchI	GAGTC	9 cut(s)	92, 137, 161, 203, 387, 437, 452, 983, 1728
ScrFI	CCNGG	4 cut(s)	197, 498, 730, 1294
SduI	GDGCHC	9 cut(s)	171, 480, 615, 687, 767, 837, 1110, 1720, 1864
SfaNI	GCATC	9 cut(s)	10, 67, 290, 366, 745, 908, 1075, 1498, 2010
SfcI	CTRYAG	3 cut(s)	57, 1818, 2334
SfoI	GGCGCC	1 cut(s)	34
Sfr274I	CTCGAG	3 cut(s)	72, 440, 971
SfuI	TTCGAA	1 cut(s)	1275
SinI	GGWCC	1 cut(s)	1484
SlaI	CTCGAG	3 cut(s)	72, 440, 971
SmiMI	CAYNNNNRTG	1 cut(s)	986
SmlI	CTYRAG	5 cut(s)	72, 440, 971, 1181, 1488
SmoI	CTYRAG	5 cut(s)	72, 440, 971, 1181, 1488
SpeI	ACTAGT	2 cut(s)	1439, 1655
SphI	GCATGC	1 cut(s)	2188
SspDI	GGCGCC	1 cut(s)	32
SspMI	CTAG	3 cut(s)	1440, 1656, 1857
SstI	GAGCTC	5 cut(s)	171, 615, 837, 1110, 1864
StyD4I	CCNGG	4 cut(s)	195, 496, 728, 1292
StyI	CCWWGG	6 cut(s)	645, 981, 1011, 1214, 1375, 1790
TaaI	ACNGT	9 cut(s)	124, 710, 817, 909, 1268, 1602, 1708, 2125, 2338
TaiI	ACGT	5 cut(s)	462, 477, 690, 774, 1191
TauI	GCSGC	6 cut(s)	33, 38, 65, 68, 452, 653
TfiI	GAWTC	5 cut(s)	218, 805, 1250, 1562, 1871
Tru1I	TTAA	7 cut(s)	9, 1032, 1350, 1586, 1977, 2130, 2288
Tru9I	TTAA	7 cut(s)	9, 1032, 1350, 1586, 1977, 2130, 2288
TscAI	CASTG	7 cut(s)	61, 548, 767, 786, 1102, 1347, 1884
TseFI	GTSAC	1 cut(s)	811
TseI	GCWGC	4 cut(s)	59, 417, 1574, 1928
Tsp45I	GTSAC	1 cut(s)	811
TspDTI	ATGAA	9 cut(s)	248, 945, 1157, 1313, 1349, 1714, 1905, 2003, 2225
TspGWI	ACGGA	2 cut(s)	161, 262
TspRI	CASTG	7 cut(s)	61, 548, 767, 786, 1102, 1347, 1884
Van91I	CCANNNNNTGG	1 cut(s)	1054
VneI	GTGCAC	1 cut(s)	476
VpaK11BI	GGWCC	1 cut(s)	1484
XapI	RAATTY	3 cut(s)	918, 952, 1500
XbaI	TCTAGA	1 cut(s)	1856
XceI	RCATGY	3 cut(s)	862, 1549, 2188
XcmI	CCANNNNNNNNNTGG	2 cut(s)	911, 988
XhoI	CTCGAG	3 cut(s)	72, 440, 971
XmiI	GTMKAC	1 cut(s)	555
XmnI	GAANNNNTTC	3 cut(s)	1190, 1236, 2232
XspI	CTAG	3 cut(s)	1440, 1656, 1857
ZraI	GACGTC	1 cut(s)	772
Zsp2I	ATGCAT	1 cut(s)	2186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.