Rh7BG329700

Conserved oligomeric Golgi complex subunit 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0005295
Physical Location & Seq
Forward (+)
34080562 .. 34086233
5672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG329700.1

Sequence Viewer

Length: 3102 bp
ATGAGAGTGAGTTCGACGACGAGCAATGAGGGAGGAGCAGGAGCGGCGGCGGCGGCTTCTTCTAGGGACGCGGAAGGGCTGTTCCGCACCAAAGGCATCACCGAGATTCGCAATGTCGAATCGGCGACGCGGAAGCAGATCCAGGCCAAGAAGGAGGAGCTCCGTCAACTCGTCGGCACTCGCTACCGCGACCTCATCGACTCCGCCGACTCCATCGTCCTCATGAAGCGCTCCGCCCACTCCATCTCCCGCAACCTCTCCTCCGTCCACCACGCCGTCATCCACTCCCTCTCTCTTTCTTCTTCTTCTTCTTCTCTCTCCAATTCCAATTCCGATTCCAAGTCCTCCGTCCGCATCTACGGAATCGCCTGCCGGGTCAAGTACCTGGTCGACACCCCCGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTCCTCGAGTCCGCCGCCCGCTACGTCCGCGCCAGCCACGTCCACTTCACCCTCACCACCCTCCACAAGCCCTTCCTCTCTCACTTTCCTCTCCTCCAGCACCAATGGCAGATCGTCGACAGCTTCAAGTCCCAGATCTCCCAGCGCGCCCGCGACCGCCTCTCCGATCACCGCCAATCCAACAACCTCCCCGTCTCCTCCTACGCCGACGCTTTGGCTGCCGTCGCTCTCATCGACGACCTCCCTCCCCAACACGTCCTCTCCCTCTTCCTCGACACCCGCAAGGCCTGGGTTTCCCACATTTTGAATACTTCCACTTCCTCAGTTGAATGCTCCCCCGACGTTGTTTCGGTCCTTTGCGAGGCCCTCAGGGTTATTCAGGTCACTGTGGGCCAGGTTGGGGAATTGTTTCTCCGGGTTTTCAACGACATGCCCCTGTTTTACAAGGTGATCCTGGGTTGCCCTCCTGCATCTCAACTCTTTGGCGGCATTCCCAACCCGGATGAGGAGGTCAAGCTTTGGAATTCCTTCAGGGACAAGTTGGAGTCTGCCATGGTAATGCTGGACAAAGACTATATTGCGAAAGCTTCTTCTTCATGGCTTGCCGACTGTGGAGCTCAGATGGTGGATAAGATCAATGGCAGGTATCTCATTGATGCTATTGGCAGCGGCAAAGAGCTTGCCTCCGCTGAGAGGTTGATAAGGGAGACTATGAATAGCAAAGAGGTCTTGGAAGGAAGCTTGGAGTGGCTTAAGAAAGTTTTCGGATCCCAAATTGACCTGCCATGGAGTAGAATGAGTGAACTTGTTCTGGGAGATGATTCAGACCTCTGGGACAGTATCTTTGAAAGTGGATTTGTTGGGAGGATGAAGGTGATTGTGGACTCCAGGTTTGAGAAGCTCAAGACGGCTGCCAATATTAATGATGGTGAGGCCATTGAATTCCTAGGTGCAGGTGGTGGAGTTTGGTTTATAGAATCCAAATCCAATAGTAAGAAGGCTACTGCTCTGCCATGTGAAGAGAACTGTCTCAATTTCTATTTTGGTCCTCAAGTTAGTGATATTAGGGATGCGGTGGATAGCAGCTGTCAGGATGTGCTTGATGACCTCCTCTCTTTTCTGGATTCTCCAAAGGCAGCTGTCAGATTAAAGAATCTGGCACCCTATCTACAAGACAAGTGTTTCCAAACTATATCCATCATATTGGAGCAACTAAGTAGTGAGCTTGATAATTTGGAAAAGGGCAGCAACAAGCAAAAGCTGCTAACCGTTGAAAGGGCTCTATTCATTGGGAGACTCTTGTTTGCATTGCAGAACCACTCCAAACACATTCCCTTAGTACTTGGCCCTCCAAGGTCTTGGGTGAATGAAAGTGAGTCTGCAGTTTTCGACAAGTTACCATCCTTATTGAGACAGTCTAGAGCCCCCACCGATTCTCATGTGCTTGATAGCCCTTTGGGCTCTAAAAGACACACCTCATCTGCTACTGCTGCACTGCTTGGAGCCAGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATGTGACTATGCGAAATCTCCGCATTAGAGCGCACACTTTCTGGATGACTTGGCTATCCGATGAGCTCTCAGTTATACTTTCCCATGATCTAGAAAAGGACGATGCTTTGTCATCCTCAACTCCCCTGAGGGGTTGGGAAGAGACAGTAGTTAGGCAAGAGCAGTCTGATGATAACCAATCAGAGATGAAAATATGGCTCCCATCCATGCCGTCTCTCTATGTTGTCTCATTTCTATTCCGTATATGTGAAGAAGTTCATCGAATAGGAGGTCATGTCCTTGACAAAATAATTCTGCAAAAATTTGCATTACAACTGTTGGAAAAGGTCATTGGCATTTATGGCGACTTCCTTTCTAATCTAGATGCTGGTGGGTCTCAAGTGTCAGAAAAAGGAGTTTTGCAGATTTTGTTAGACTTGAGATTTGTTTTTGATGTCCTCTCTGGGGGTGATTCTAATTTGAATGAGGAGCGGAAGACAAAAAGTACTTTCAGAAGGAAGCAGGACCAAAGCCGTATGAAGTCAGCTACTAGAGAGCGTTTTGATGGGTTGATACATCATTTTTCACAAAGATTGGATCCCATAGACTGGCTTACGTACGAGCCGTATCTCTGGGAAAATGAGAAGCAGTCCTACCTCCGGCATGCCGTCCTTTTTGGATTCTTTGTGCAACTTAATCGCATGTACACAGACACTGTTCAGAAACTTCCTACTAATTCAGAGTCCAATATCATGAGATGCTCTTCAGTTCCTCGCTTTAAGTACCTTCCAATCAGTGCCCCAGCATTGTCTTCAAGAGGGACAGCAGCTAAGGCATCCATTCAAACATCTTCCGATGATATTTCTTCAAGAAGTAGCTGGAAAGCTTATACAAATGGAGAGCTGTCCAGAAGTATTGATTTGGATGATAACTCAAGTTTTGGGGTTGCAGTACCAATCTTAAAATCTTTCATGCAGGCTGGAAGTAGGTTTGGAGAGAGCACATTAAAACTGGGATCCATGCTAACAGATGGGCAAGTGGGCATATTCAAGGATAGATCAGCCGCCGCCATGTCGACATTTGGTGACATTCTACCTGCCCACGCTGCAGGTCTCCTTTCATCATTCACAGCTTCCAGATCAGACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps51

Protein Analysis

1033

Amino Acids

114.77

Weight (kDa)

6.28

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 21 - 92 1.1e-13 Vps51/EXO84/COG1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1376
AasI GACNNNNNNGTC 1 cut(s) 215
Acc36I ACCTGC 5 cut(s) 1065, 1221, 1376, 3050, 3055
AccB1I GGYRCC 1 cut(s) 1591
AccB7I CCANNNNNTGG 1 cut(s) 2559
AccBSI CCGCTC 2 cut(s) 44, 2443
AccI GTMKAC 3 cut(s) 390, 549, 3026
AccII CGCG 6 cut(s) 71, 130, 189, 462, 579, 585
AclWI GGATC 8 cut(s) 133, 877, 1194, 1207, 2543, 2556, 2961, 2974
AcsI RAATTY 3 cut(s) 955, 1373, 2273
AcuI CTGAAG 2 cut(s) 946, 2700
AfaI GTAC 7 cut(s) 383, 1773, 2458, 2570, 2657, 2735, 2904
AfeI AGCGCT 1 cut(s) 230
AfiI CCNNNNNNNGG 9 cut(s) 793, 832, 937, 1125, 1707, 2102, 2416, 2559, 2610
AflII CTTAAG 1 cut(s) 1184
AflIII ACRYGT 1 cut(s) 685
AjiI CACGTC 2 cut(s) 472, 688
AjnI CCWGG 6 cut(s) 141, 384, 719, 825, 885, 1319
AjuI GAANNNNNNNTTGG 2 cut(s) 2286, 2318
AloI GAACNNNNNNTCC 2 cut(s) 65, 97
Alw21I GWGCWC 4 cut(s) 162, 1051, 2040, 2954
AlwI GGATC 8 cut(s) 133, 877, 1194, 1207, 2543, 2556, 2961, 2974
AlwNI CAGNNNCTG 1 cut(s) 2666
Ama87I CYCGRG 2 cut(s) 398, 437
Aor51HI AGCGCT 1 cut(s) 230
AoxI GGCC 6 cut(s) 144, 717, 795, 823, 1365, 1777
ApoI RAATTY 3 cut(s) 955, 1373, 2273
ArsI GACNNNNNNTTYG 8 cut(s) 1259, 1291, 1307, 1339, 2227, 2259, 2378, 2410
AseI ATTAAT 1 cut(s) 1353
Asp700I GAANNNNTTC 5 cut(s) 840, 959, 1193, 1239, 2226
AspA2I CCTAGG 1 cut(s) 1378
AspLEI GCGC 5 cut(s) 231, 464, 579, 581, 2005
AspS9I GGNCC 6 cut(s) 784, 796, 823, 1478, 1778, 2476
AsuC2I CCSGG 3 cut(s) 374, 848, 932
AvaI CYCGRG 2 cut(s) 398, 437
AvaII GGWCC 3 cut(s) 784, 1478, 2476
AvrII CCTAGG 1 cut(s) 1378
AxyI CCTNAGG 2 cut(s) 800, 2099
BaeGI GKGCMC 1 cut(s) 2752
BamHI GGATCC 3 cut(s) 1199, 2548, 2966
BanI GGYRCC 1 cut(s) 1591
BanII GRGCYC 6 cut(s) 162, 1051, 1714, 1858, 1895, 2040
BarI GAAGNNNNNNTAC 2 cut(s) 2588, 2620
BbsI GAAGAC 2 cut(s) 2453, 2754
Bbv12I GWGCWC 4 cut(s) 162, 1051, 2040, 2954
BccI CCATC 9 cut(s) 221, 251, 1048, 1352, 1637, 1840, 2182, 2510, 2975
BceAI ACGGC 7 cut(s) 260, 638, 1356, 2167, 2469, 2560, 2603
BcgI CGANNNNNNTGC 2 cut(s) 2630, 2664
BciT130I CCWGG 6 cut(s) 143, 386, 721, 827, 887, 1321
BcnI CCSGG 3 cut(s) 374, 848, 932
BfaI CTAG 6 cut(s) 63, 1379, 1851, 2063, 2333, 2502
BfmI CTRYAG 2 cut(s) 1812, 3057
BfoI RGCGCY 1 cut(s) 232
BfrI CTTAAG 1 cut(s) 1184
BfuAI ACCTGC 5 cut(s) 1065, 1221, 1376, 3050, 3055
BglI GCCNNNNNGGC 1 cut(s) 1890
BglII AGATCT 1 cut(s) 567
BlnI CCTAGG 1 cut(s) 1378
BmcAI AGTACT 2 cut(s) 1773, 2458
Bme1390I CCNGG 9 cut(s) 143, 374, 386, 721, 827, 848, 887, 932, 1321
Bme18I GGWCC 3 cut(s) 784, 1478, 2476
BmeT110I CYCGRG 2 cut(s) 398, 437
BmgBI CACGTC 2 cut(s) 472, 688
BmgT120I GGNCC 6 cut(s) 784, 796, 823, 1478, 1778, 2476
BmiI GGNNCC 6 cut(s) 1201, 1593, 1936, 2171, 2550, 2968
BmrFI CCNGG 9 cut(s) 143, 374, 386, 721, 827, 848, 887, 932, 1321
BmrI ACTGGG 1 cut(s) 2972
BmsI GCATC 9 cut(s) 105, 363, 911, 1078, 1492, 2065, 2326, 2699, 2795
BmuI ACTGGG 1 cut(s) 2972
BpiI GAAGAC 2 cut(s) 2453, 2754
BplI GAGNNNNNCTC 2 cut(s) 1100, 1132
BpmI CTGGAG 2 cut(s) 512, 1303
Bpu10I CCTNAGC 1 cut(s) 2781
BpuEI CTTGAG 5 cut(s) 1319, 1467, 2334, 2410, 2869
BpuMI CCSGG 3 cut(s) 374, 848, 932
BsaAI YACGTR 1 cut(s) 2568
BsaI GGTCTC 2 cut(s) 2352, 3068
BsaJI CCNNGG 6 cut(s) 720, 886, 984, 1217, 1378, 1784
Bsc4I CCNNNNNNNGG 9 cut(s) 793, 832, 937, 1125, 1707, 2102, 2416, 2559, 2610
Bse1I ACTGG 2 cut(s) 2564, 2967
Bse21I CCTNAGG 2 cut(s) 800, 2099
Bse3DI GCAATG 3 cut(s) 31, 118, 1739
BseBI CCWGG 6 cut(s) 143, 386, 721, 827, 887, 1321
BseDI CCNNGG 6 cut(s) 720, 886, 984, 1217, 1378, 1784
BseLI CCNNNNNNNGG 9 cut(s) 793, 832, 937, 1125, 1707, 2102, 2416, 2559, 2610
BseMI GCAATG 3 cut(s) 31, 118, 1739
BseMII CTCAG 6 cut(s) 768, 814, 1064, 1113, 2055, 2090
BseNI ACTGG 2 cut(s) 2564, 2967
BsePI GCGCGC 1 cut(s) 577
BseRI GAGGAG 8 cut(s) 48, 170, 250, 515, 619, 953, 1532, 2453
BseSI GKGCMC 1 cut(s) 2752
BseYI CCCAGC 2 cut(s) 573, 2752
BsgI GTGCAG 2 cut(s) 1404, 1908
Bsh1236I CGCG 6 cut(s) 71, 130, 189, 462, 579, 585
Bsh1285I CGRYCG 1 cut(s) 589
BshFI GGCC 6 cut(s) 146, 719, 797, 825, 1367, 1779
BshNI GGYRCC 1 cut(s) 1591
BsiEI CGRYCG 1 cut(s) 589
BsiHKAI GWGCWC 4 cut(s) 162, 1051, 2040, 2954
BsiHKCI CYCGRG 2 cut(s) 398, 437
BsiSI CCGG 4 cut(s) 373, 847, 932, 2611
BsiWI CGTACG 1 cut(s) 2568
BslFI GGGAC 5 cut(s) 80, 547, 980, 1280, 2785
BslI CCNNNNNNNGG 9 cut(s) 793, 832, 937, 1125, 1707, 2102, 2416, 2559, 2610
BsmBI CGTCTC 2 cut(s) 631, 2190
BsmFI GGGAC 5 cut(s) 80, 547, 980, 1280, 2785
BsmI GAATGC 2 cut(s) 767, 921
BsnI GGCC 6 cut(s) 146, 719, 797, 825, 1367, 1779
Bso31I GGTCTC 2 cut(s) 2352, 3068
BsoBI CYCGRG 2 cut(s) 398, 437
Bsp1286I GDGCHC 8 cut(s) 162, 1051, 1714, 1858, 1895, 2040, 2752, 2954
Bsp1407I TGTACA 1 cut(s) 2655
Bsp19I CCATGG 2 cut(s) 984, 1217
BspANI GGCC 6 cut(s) 146, 719, 797, 825, 1367, 1779
BspCNI CTCAG 6 cut(s) 767, 813, 1063, 1114, 2054, 2091
BspFNI CGCG 6 cut(s) 71, 130, 189, 462, 579, 585
BspHI TCATGA 2 cut(s) 222, 2703
BspLI GGNNCC 6 cut(s) 1201, 1593, 1936, 2171, 2550, 2968
BspMAI CTGCAG 2 cut(s) 1816, 3061
BspMI ACCTGC 5 cut(s) 1065, 1221, 1376, 3050, 3055
BspPI GGATC 8 cut(s) 133, 877, 1194, 1207, 2543, 2556, 2961, 2974
BspQI GCTCTTC 2 cut(s) 1959, 2719
BspT107I GGYRCC 1 cut(s) 1591
BspTI CTTAAG 1 cut(s) 1184
BspTNI GGTCTC 2 cut(s) 2352, 3068
BsrBI CCGCTC 2 cut(s) 44, 2443
BsrDI GCAATG 3 cut(s) 31, 118, 1739
BsrGI TGTACA 1 cut(s) 2655
BsrI ACTGG 2 cut(s) 2564, 2967
BssECI CCNNGG 6 cut(s) 720, 886, 984, 1217, 1378, 1784
BssHII GCGCGC 1 cut(s) 577
BssT1I CCWWGG 4 cut(s) 984, 1217, 1378, 1784
Bst2UI CCWGG 6 cut(s) 143, 386, 721, 827, 887, 1321
Bst4CI ACNGT 9 cut(s) 820, 1043, 1271, 1460, 1702, 1848, 2119, 2289, 2668
Bst6I CTCTTC 5 cut(s) 704, 1446, 1959, 2106, 2719
BstAFI CTTAAG 1 cut(s) 1184
BstAPI GCANNNNNTGC 1 cut(s) 1693
BstAUI TGTACA 1 cut(s) 2655
BstBAI YACGTR 1 cut(s) 2568
BstDEI CTNAG 9 cut(s) 754, 800, 1050, 1122, 1646, 1768, 2041, 2099, 2781
BstDSI CCRYGG 2 cut(s) 984, 1217
BstENI CCTNNNNNAGG 1 cut(s) 791
BstFNI CGCG 6 cut(s) 71, 130, 189, 462, 579, 585
BstH2I RGCGCY 1 cut(s) 232
BstHHI GCGC 5 cut(s) 231, 464, 579, 581, 2005
BstMCI CGRYCG 1 cut(s) 589
BstNI CCWGG 6 cut(s) 143, 386, 721, 827, 887, 1321
BstNSI RCATGY 3 cut(s) 865, 2618, 2656
BstSCI CCNGG 9 cut(s) 141, 372, 384, 719, 825, 846, 885, 930, 1319
BstSFI CTRYAG 2 cut(s) 1812, 3057
BstSLI GKGCMC 1 cut(s) 2752
BstSNI TACGTA 1 cut(s) 2568
BstUI CGCG 6 cut(s) 71, 130, 189, 462, 579, 585
BstV2I GAAGAC 2 cut(s) 2453, 2754
BstX2I RGATCY 5 cut(s) 138, 567, 1199, 2548, 2966
BstXI CCANNNNNNTGG 2 cut(s) 1636, 1791
BstYI RGATCY 5 cut(s) 138, 567, 1199, 2548, 2966
Bsu36I CCTNAGG 2 cut(s) 800, 2099
BsuRI GGCC 6 cut(s) 146, 719, 797, 825, 1367, 1779
BtgI CCRYGG 2 cut(s) 984, 1217
BtrI CACGTC 2 cut(s) 472, 688
BtsI GCAGTG 1 cut(s) 1925
BtsIMutI CAGTG 4 cut(s) 816, 1925, 2664, 2752
BveI ACCTGC 5 cut(s) 1065, 1221, 1376, 3050, 3055
CaiI CAGNNNCTG 1 cut(s) 2666
CciI TCATGA 2 cut(s) 222, 2703
CfoI GCGC 5 cut(s) 231, 464, 579, 581, 2005
Cfr13I GGNCC 6 cut(s) 784, 796, 823, 1478, 1778, 2476
CseI GACGC 3 cut(s) 77, 136, 650
CsiI ACCWGGT 1 cut(s) 384
Csp6I GTAC 7 cut(s) 382, 1772, 2457, 2569, 2656, 2734, 2903
CviQI GTAC 7 cut(s) 382, 1772, 2457, 2569, 2656, 2734, 2903
DdeI CTNAG 9 cut(s) 754, 800, 1050, 1122, 1646, 1768, 2041, 2099, 2781
DrdI GACNNNNNNGTC 1 cut(s) 215
DseDI GACNNNNNNGTC 1 cut(s) 215
Eam1104I CTCTTC 5 cut(s) 704, 1446, 1959, 2106, 2719
EarI CTCTTC 5 cut(s) 704, 1446, 1959, 2106, 2719
EciI GGCGGA 3 cut(s) 193, 223, 433
Ecl136II GAGCTC 3 cut(s) 160, 1049, 2038
Eco105I TACGTA 1 cut(s) 2568
Eco130I CCWWGG 4 cut(s) 984, 1217, 1378, 1784
Eco147I AGGCCT 1 cut(s) 719
Eco24I GRGCYC 6 cut(s) 162, 1051, 1714, 1858, 1895, 2040
Eco31I GGTCTC 2 cut(s) 2352, 3068
Eco47I GGWCC 3 cut(s) 784, 1478, 2476
Eco47III AGCGCT 1 cut(s) 230
Eco53kI GAGCTC 3 cut(s) 160, 1049, 2038
Eco57I CTGAAG 2 cut(s) 946, 2700
Eco81I CCTNAGG 2 cut(s) 800, 2099
Eco88I CYCGRG 2 cut(s) 398, 437
EcoICRI GAGCTC 3 cut(s) 160, 1049, 2038
EcoNI CCTNNNNNAGG 1 cut(s) 791
EcoO109I RGGNCCY 1 cut(s) 796
EcoRI GAATTC 2 cut(s) 955, 1373
EcoRII CCWGG 6 cut(s) 141, 384, 719, 825, 885, 1319
EcoT14I CCWWGG 4 cut(s) 984, 1217, 1378, 1784
EcoT38I GRGCYC 6 cut(s) 162, 1051, 1714, 1858, 1895, 2040
ErhI CCWWGG 4 cut(s) 984, 1217, 1378, 1784
Esp3I CGTCTC 2 cut(s) 631, 2190
FaqI GGGAC 5 cut(s) 80, 547, 980, 1280, 2785
FauI CCCGC 4 cut(s) 257, 458, 590, 719
FblI GTMKAC 3 cut(s) 390, 549, 3026
FriOI GRGCYC 6 cut(s) 162, 1051, 1714, 1858, 1895, 2040
FspBI CTAG 6 cut(s) 63, 1379, 1851, 2063, 2333, 2502
GlaI GCGC 5 cut(s) 230, 463, 578, 580, 2004
GsaI CCCAGC 2 cut(s) 577, 2756
GsuI CTGGAG 2 cut(s) 512, 1303
HaeII RGCGCY 1 cut(s) 232
HaeIII GGCC 6 cut(s) 146, 719, 797, 825, 1367, 1779
HapII CCGG 4 cut(s) 373, 847, 932, 2611
HgaI GACGC 3 cut(s) 77, 136, 650
HhaI GCGC 5 cut(s) 231, 464, 579, 581, 2005
Hin6I GCGC 5 cut(s) 229, 462, 577, 579, 2003
HinP1I GCGC 5 cut(s) 229, 462, 577, 579, 2003
HincII GTYRAC 4 cut(s) 167, 391, 550, 3027
HindII GTYRAC 4 cut(s) 167, 391, 550, 3027
HindIII AAGCTT 4 cut(s) 947, 1017, 1171, 2835
HpaII CCGG 4 cut(s) 373, 847, 932, 2611
Hpy166II GTNNAC 9 cut(s) 167, 268, 391, 475, 550, 1235, 1315, 2658, 3027
Hpy8I GTNNAC 9 cut(s) 167, 268, 391, 475, 550, 1235, 1315, 2658, 3027
HpyAV CCTTC 9 cut(s) 68, 145, 514, 970, 1160, 1297, 1423, 2460, 2747
HpyCH4III ACNGT 9 cut(s) 820, 1043, 1271, 1460, 1702, 1848, 2119, 2289, 2668
HpyCH4IV ACGT 5 cut(s) 456, 471, 687, 774, 2567
HpyF3I CTNAG 9 cut(s) 754, 800, 1050, 1122, 1646, 1768, 2041, 2099, 2781
HpySE526I ACGT 5 cut(s) 456, 471, 687, 774, 2567
HspAI GCGC 5 cut(s) 229, 462, 577, 579, 2003
LguI GCTCTTC 2 cut(s) 1959, 2719
LweI GCATC 9 cut(s) 105, 363, 911, 1078, 1492, 2065, 2326, 2699, 2795
MabI ACCWGGT 1 cut(s) 384
MaeI CTAG 6 cut(s) 63, 1379, 1851, 2063, 2333, 2502
MaeII ACGT 5 cut(s) 456, 471, 687, 774, 2567
MaeIII GTNAC 4 cut(s) 814, 1827, 1975, 3035
MbiI CCGCTC 2 cut(s) 44, 2443
MflI RGATCY 5 cut(s) 138, 567, 1199, 2548, 2966
MhlI GDGCHC 8 cut(s) 162, 1051, 1714, 1858, 1895, 2040, 2752, 2954
MmeI TCCRAC 3 cut(s) 636, 954, 2271
MroXI GAANNNNTTC 5 cut(s) 840, 959, 1193, 1239, 2226
MseI TTAA 8 cut(s) 1185, 1353, 1580, 1971, 2646, 2730, 2912, 2957
MslI CAYNNNNRTG 1 cut(s) 989
MspA1I CMGCKG 4 cut(s) 1101, 1121, 1518, 1571
MspCI CTTAAG 1 cut(s) 1184
MspI CCGG 4 cut(s) 373, 847, 932, 2611
MspR9I CCNGG 9 cut(s) 143, 374, 386, 721, 827, 848, 887, 932, 1321
Mva1269I GAATGC 2 cut(s) 767, 921
MvaI CCWGG 6 cut(s) 143, 386, 721, 827, 887, 1321
MvnI CGCG 6 cut(s) 71, 130, 189, 462, 579, 585
NciI CCSGG 3 cut(s) 374, 848, 932
NcoI CCATGG 2 cut(s) 984, 1217
NlaIV GGNNCC 6 cut(s) 1201, 1593, 1936, 2171, 2550, 2968
NmuCI GTSAC 3 cut(s) 814, 1975, 3035
NspI RCATGY 3 cut(s) 865, 2618, 2656
PaeI GCATGC 1 cut(s) 2618
PaeR7I CTCGAG 1 cut(s) 437
PagI TCATGA 2 cut(s) 222, 2703
PaqCI CACCTGC 1 cut(s) 1376
PauI GCGCGC 1 cut(s) 577
PceI AGGCCT 1 cut(s) 719
PciSI GCTCTTC 2 cut(s) 1959, 2719
PcsI WCGNNNNNNNCGW 4 cut(s) 204, 396, 663, 2573
PctI GAATGC 2 cut(s) 767, 921
PdmI GAANNNNTTC 5 cut(s) 840, 959, 1193, 1239, 2226
Pfl23II CGTACG 1 cut(s) 2568
PflMI CCANNNNNTGG 1 cut(s) 2559
Ppu21I YACGTR 1 cut(s) 2568
PshBI ATTAAT 1 cut(s) 1353
Psp124BI GAGCTC 3 cut(s) 162, 1051, 2040
Psp6I CCWGG 6 cut(s) 141, 384, 719, 825, 885, 1319
PspFI CCCAGC 2 cut(s) 573, 2752
PspGI CCWGG 6 cut(s) 141, 384, 719, 825, 885, 1319
PspLI CGTACG 1 cut(s) 2568
PspN4I GGNNCC 6 cut(s) 1201, 1593, 1936, 2171, 2550, 2968
PspPI GGNCC 6 cut(s) 784, 796, 823, 1478, 1778, 2476
PspXI VCTCGAGB 1 cut(s) 437
PstI CTGCAG 2 cut(s) 1816, 3061
PstNI CAGNNNCTG 1 cut(s) 2666
PsuI RGATCY 5 cut(s) 138, 567, 1199, 2548, 2966
PteI GCGCGC 1 cut(s) 577
PvuII CAGCTG 2 cut(s) 1518, 1571
RsaI GTAC 7 cut(s) 383, 1773, 2458, 2570, 2657, 2735, 2904
RsaNI GTAC 7 cut(s) 382, 1772, 2457, 2569, 2656, 2734, 2903
RseI CAYNNNNRTG 1 cut(s) 989
SacI GAGCTC 3 cut(s) 162, 1051, 2040
SalI GTCGAC 3 cut(s) 389, 548, 3025
SapI GCTCTTC 2 cut(s) 1959, 2719
SaqAI TTAA 8 cut(s) 1185, 1353, 1580, 1971, 2646, 2730, 2912, 2957
Sau96I GGNCC 6 cut(s) 784, 796, 823, 1478, 1778, 2476
ScaI AGTACT 2 cut(s) 1773, 2458
ScrFI CCNGG 9 cut(s) 143, 374, 386, 721, 827, 848, 887, 932, 1321
SduI GDGCHC 8 cut(s) 162, 1051, 1714, 1858, 1895, 2040, 2752, 2954
SexAI ACCWGGT 1 cut(s) 384
SfaNI GCATC 9 cut(s) 105, 363, 911, 1078, 1492, 2065, 2326, 2699, 2795
SfcI CTRYAG 2 cut(s) 1812, 3057
Sfr274I CTCGAG 1 cut(s) 437
SinI GGWCC 3 cut(s) 784, 1478, 2476
SlaI CTCGAG 1 cut(s) 437
SmiMI CAYNNNNRTG 1 cut(s) 989
SmlI CTYRAG 7 cut(s) 437, 1184, 1334, 1482, 2349, 2389, 2884
SmoI CTYRAG 7 cut(s) 437, 1184, 1334, 1482, 2349, 2389, 2884
SnaBI TACGTA 1 cut(s) 2568
SphI GCATGC 1 cut(s) 2618
SseBI AGGCCT 1 cut(s) 719
SspI AATATT 1 cut(s) 1351
SspMI CTAG 6 cut(s) 63, 1379, 1851, 2063, 2333, 2502
SstI GAGCTC 3 cut(s) 162, 1051, 2040
StuI AGGCCT 1 cut(s) 719
StyD4I CCNGG 9 cut(s) 141, 372, 384, 719, 825, 846, 885, 930, 1319
StyI CCWWGG 4 cut(s) 984, 1217, 1378, 1784
TaaI ACNGT 9 cut(s) 820, 1043, 1271, 1460, 1702, 1848, 2119, 2289, 2668
TaiI ACGT 5 cut(s) 459, 474, 690, 777, 2570
TaqII GACCGA 1 cut(s) 772
TatI WGTACW 3 cut(s) 1771, 2456, 2655
TauI GCSGC 9 cut(s) 47, 50, 53, 56, 449, 921, 1104, 3017, 3020
Tru1I TTAA 8 cut(s) 1185, 1353, 1580, 1971, 2646, 2730, 2912, 2957
Tru9I TTAA 8 cut(s) 1185, 1353, 1580, 1971, 2646, 2730, 2912, 2957
TscAI CASTG 4 cut(s) 823, 1932, 2671, 2752
TseFI GTSAC 3 cut(s) 814, 1975, 3035
Tsp45I GTSAC 3 cut(s) 814, 1975, 3035
TspGWI ACGGA 5 cut(s) 152, 253, 337, 375, 2201
TspRI CASTG 4 cut(s) 823, 1932, 2671, 2752
Van91I CCANNNNNTGG 1 cut(s) 2559
Vha464I CTTAAG 1 cut(s) 1184
VpaK11BI GGWCC 3 cut(s) 784, 1478, 2476
VspI ATTAAT 1 cut(s) 1353
XagI CCTNNNNNAGG 1 cut(s) 791
XapI RAATTY 3 cut(s) 955, 1373, 2273
XbaI TCTAGA 3 cut(s) 1850, 2062, 2332
XceI RCATGY 3 cut(s) 865, 2618, 2656
XcmI CCANNNNNNNNNTGG 1 cut(s) 991
XhoI CTCGAG 1 cut(s) 437
XmaJI CCTAGG 1 cut(s) 1378
XmiI GTMKAC 3 cut(s) 390, 549, 3026
XmnI GAANNNNTTC 5 cut(s) 840, 959, 1193, 1239, 2226
XspI CTAG 6 cut(s) 63, 1379, 1851, 2063, 2333, 2502
ZrmI AGTACT 2 cut(s) 1773, 2458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.