RchiOBHm_Chr7g0220971

Conserved oligomeric Golgi complex subunit 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0005295
Physical Location & Seq
Forward (+)
41876163 .. 41883613
7451 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19777

Sequence Viewer

Length: 3108 bp
ATGAGAGTGAGTTCGACGAGCAATGAGGGAGGAGGAGCGGCGGCGGCGGCTTCGGCTTCTAGGGACGCGGAAGGGCTGTTCCGCACCAAAGGCATCACCGAGATTCGCAATGTCGAATCGACGACGCGGAAGCAGATCCAAGCCAAGAAGGAGGAGCTCCGTCAACTCGTCGGCACTCGCTACCGCGACCTCATCGACTCCGCCGACTCCATCGTCCTCATGAAGCGTTCCGCCCACTCCATCTCCCGCAACCTCTCCTCCGTCCACCACGCCGTCATCCACTCCCTCTCTCTTTCTTCTTCTTCTCTCTCCAATTCCGATTCCGATTCCAAGTCCTCCTCCGACTCCTCCGTCCGCATCTACGGAATCGCCTGCCGGGTCAAGTACCTGGTCGACACCCCCGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTCCTCGAGTCCGCCGCCCGCTACGTCCGCGCCAGCCACGTCCACTTCACCCTCACCACCCTCCACAAGCCCTTCCTCTCTCACTTTCCTCTCCTCCAGCACCAGTGGCAGATCGTCGACAGCTTCAAGTCCCAGATCTCCCAGCGCGCCCGCGACCGCCTCTCCGATCACCGCCAATCCAACCTCCCCGTCTCCTCCTACGCCGACGCTTTGGCTGCCGTCGCTCTCATCGACGACCTCCCTCCCCAACACGTCCTCTCCCTCTTCCTCGACACCCGCAAGTCCTGGGTTTCCCACATTTTGAATACTTCCACTTCCTCAGTTGAATGCTCCGAAGTTGTTTCGGTCCTTTGCGAGGCCCTCAGGGTTATTCAGGTCACCGTGGGCCAGGTTGGGGAATTGTTTCTCCGGGTTTTCAACGACATGCCCCTGTTTTACAAGGTGGTCTTGGGTTGCCCTCCTGCATCTCAACTCTTTGGCGGCATTCCCAACCCGGATGAGGAGGTCAAGCTTTGGAATTCCTTCAGGGACAAGTTGGAGTCTGCCATGGTTATGCTGGACAAAGACTATATTGCGAAAGCTTCTTCTTCATGGCTTGCGGACTGTGGAGCTCAGATGGTGGATAAGATCAATGGCAGGTATCTCATTGATGCTATTGGCAGCGGCAAAGAGCTTGCCTCCGCTGAGAGGTTGATAAGGGAGACTATGAATAGCAAAGAGGTCTTGGAAGGAAGCTTGGAGTGGCTCAAGAAAGTTTTCGGATCCCAAATTGACCTGCCATGGAGCAGAATGAGTGAACTTGTTCTGGGAGATGATTCAGACCTCTGGGACAGTATCTTTGAAAGTGGATTTGTTGGGAGGATGAAGGTGATTGTGGACTCCAGGTTTGAGAAGCTCAAGACGGCTGCCAATATTAATGATGGTGAGGCCATTGAATTCCTAGGTGCAGGTGGTGGAGTTTGGTTTATAGAATCCAAATCCAATAGTAAGAAGGCTACTGCTCTGCCATGTGAAGAGAACTGTCTCAATTTCTATTTTGGTCCTCAAGTTAGTGATATTAGGGATGCGGTGGATAGCAGCTGTCAGGATGTGCTTGATGACCTCCTCTCTTTTCTGGAGTCTCCAAAGGCAGCTGTCAGATTAAAGAATCTGGCACCCTATCTACAAGACAAGTGTTTCCAAACTATATCCATCATATTGGAGCAACTGAGTAGTGAGCTTGATAATTTGGAAAAGGGCAGCAACAAGCAAAAGCTGCTAACCGTTGAAAGGGCTCTATTCATTGGGAGACTCTTGTTTGCATTGCAGAATCACTCCAAACACATTCCCTTAGTACTTGGCCCTCCAAGGTCTTGGGTGAATGAAAGTGAGTCTGCAGTTTTCGACAAGTTACCATCCTTATTGAGACAGTCTAGAGCCCCCACCGATTCTCATGTGCTTGATAGCCCATTGGGCTCTAAAAGACACACCTCATCTGCTACTGCTGCACTGCTTGGAGCCAGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATGTGACTATGCGAAATCTCCGCATTAGAGCGCACACTTTCTGGATGACTTGGCTATCCGATGAGCTCTCAGTTATACTTGCCCGTGATCTAGAAAAGGACGATGCTTTGTCATCCTCAACTCCCCTGAGGGGTTGGGAAGAGACAGTAGTTAGGCAAGAGCAGTCTGATGATAACCAATCAGAGATGAAAATATGGCTCCCATCCATGCCTTCTCTCTATGTTGTCTCATTTCTATTCCGTATATGTGAAGAAGTTCATCGAATAGGAGGTCATGTCCTTGACAAAATAATTCTGCAAAAATTTGCATTACAACTGTTGGAAAAGGTCATTGGCATTTATGGCGACTTCCTTTCTAATCTAGATGCTGGTGGGTCTCAAGTGTCAGAAAAAGGAGTTTTGCAGATTTTGTTAGACTTGAGATTTGTTTTTGATGTCCTCTCTGGGGGTGATTCTAATTTGAATGAGGAGCGGAAGACAAAAAGTACTTTCAGAAGGAAGCAGGACCAAAGCCGTATGAAGTCAGCTACTAGAGAGCGTTTTGATGGGTTGATACATCATTTTTCACAAAGATTGGATCCCATAGACTGGCTTACGTACGAGCCGTATCTCTGGGAAAATGAGAAGCAGTCCTACCTCCGGCATGCTGTCCTTTTTGGATTCTTTGTGCAACTTAATCGCATGTACACAGACACTGTTCAGAAACTTCCTACTAATTCAGAGTCCAATATCATGAGATGCTCTTCAGTTCCTCGCTTTAAGTACCTTCCAATCAGTGCCCCAGCATTGTCTTCAAGAGGGACAGCAGCTAAGACATCCATTCAAACATCTTCCGATGATATTTCTTCAAGAAGTAGCTGGAAAGCTTATACAAATGGAGAGCTGTCCAGAAGTATTGATTTGGATGATAACTCAAGTTTTGGGGTTGCACTAGGTTCTCAAATTGATGTTCCTTTTAATGGGCAGGCTGGAAGTAGATTTGGAGAGAGCACATTAAAACTGGGATCCATGCTAACAGATGGGCAAGTGGGCATATTCAAGGATAGATCAGCCGCTGCCATGTCGACATTTGGTGACATTCTACCTGCCCATGCTGCAGGTCTCCTTTCATCATTCACAGCTTCCAGATCAGACTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps51

Protein Analysis

1035

Amino Acids

114.96

Weight (kDa)

6.08

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 18 - 91 3.1e-14 Vps51/EXO84/COG1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1373
AasI GACNNNNNNGTC 2 cut(s) 212, 350
Acc36I ACCTGC 5 cut(s) 1062, 1218, 1373, 3056, 3061
AccB1I GGYRCC 1 cut(s) 1588
AccB7I CCANNNNNTGG 1 cut(s) 2556
AccBSI CCGCTC 2 cut(s) 38, 2440
AccI GTMKAC 3 cut(s) 393, 552, 3032
AccII CGCG 6 cut(s) 68, 127, 186, 465, 582, 588
AclWI GGATC 7 cut(s) 130, 1191, 1204, 2540, 2553, 2967, 2980
AcsI RAATTY 3 cut(s) 952, 1370, 2270
AcuI CTGAAG 2 cut(s) 943, 2697
AfaI GTAC 6 cut(s) 386, 1770, 2455, 2567, 2654, 2732
AflIII ACRYGT 1 cut(s) 685
AjiI CACGTC 2 cut(s) 475, 688
AjnI CCWGG 4 cut(s) 387, 719, 822, 1316
AjuI GAANNNNNNNTTGG 2 cut(s) 2283, 2315
AloI GAACNNNNNNTCC 2 cut(s) 62, 94
Alw21I GWGCWC 4 cut(s) 159, 1048, 2037, 2960
AlwI GGATC 7 cut(s) 130, 1191, 1204, 2540, 2553, 2967, 2980
AlwNI CAGNNNCTG 2 cut(s) 2663, 3023
Ama87I CYCGRG 2 cut(s) 401, 440
AoxI GGCC 4 cut(s) 792, 820, 1362, 1774
ApoI RAATTY 3 cut(s) 952, 1370, 2270
ArsI GACNNNNNNTTYG 8 cut(s) 1256, 1288, 1304, 1336, 2224, 2256, 2375, 2407
AseI ATTAAT 1 cut(s) 1350
Asp700I GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
AspA2I CCTAGG 1 cut(s) 1375
AspLEI GCGC 4 cut(s) 467, 582, 584, 2002
AspS9I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
AsuC2I CCSGG 3 cut(s) 377, 845, 929
AvaI CYCGRG 2 cut(s) 401, 440
AvaII GGWCC 3 cut(s) 781, 1475, 2473
AvrII CCTAGG 1 cut(s) 1375
AxyI CCTNAGG 2 cut(s) 797, 2096
BaeGI GKGCMC 1 cut(s) 2749
BamHI GGATCC 3 cut(s) 1196, 2545, 2972
BanI GGYRCC 1 cut(s) 1588
BanII GRGCYC 6 cut(s) 159, 1048, 1711, 1855, 1892, 2037
BarI GAAGNNNNNNTAC 2 cut(s) 2585, 2617
BbsI GAAGAC 2 cut(s) 2450, 2751
Bbv12I GWGCWC 4 cut(s) 159, 1048, 2037, 2960
BccI CCATC 9 cut(s) 218, 248, 1045, 1349, 1634, 1837, 2179, 2507, 2981
BceAI ACGGC 5 cut(s) 257, 638, 1353, 2466, 2557
BcgI CGANNNNNNTGC 2 cut(s) 2627, 2661
BciT130I CCWGG 4 cut(s) 389, 721, 824, 1318
BcnI CCSGG 3 cut(s) 377, 845, 929
BfaI CTAG 7 cut(s) 60, 1376, 1848, 2060, 2330, 2499, 2900
BfmI CTRYAG 2 cut(s) 1809, 3063
BfuAI ACCTGC 5 cut(s) 1062, 1218, 1373, 3056, 3061
BglI GCCNNNNNGGC 1 cut(s) 1887
BglII AGATCT 1 cut(s) 570
BlnI CCTAGG 1 cut(s) 1375
BmcAI AGTACT 2 cut(s) 1770, 2455
Bme1390I CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
Bme18I GGWCC 3 cut(s) 781, 1475, 2473
BmeT110I CYCGRG 2 cut(s) 401, 440
BmgBI CACGTC 2 cut(s) 475, 688
BmgT120I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
BmiI GGNNCC 6 cut(s) 1198, 1590, 1933, 2168, 2547, 2974
BmrFI CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
BmrI ACTGGG 1 cut(s) 2978
BmsI GCATC 8 cut(s) 102, 366, 908, 1075, 1489, 2062, 2323, 2696
BmuI ACTGGG 1 cut(s) 2978
BpiI GAAGAC 2 cut(s) 2450, 2751
BplI GAGNNNNNCTC 2 cut(s) 1097, 1129
BpmI CTGGAG 3 cut(s) 515, 1300, 1571
BpuEI CTTGAG 6 cut(s) 1166, 1316, 1464, 2331, 2407, 2866
BpuMI CCSGG 3 cut(s) 377, 845, 929
BsaAI YACGTR 1 cut(s) 2565
BsaI GGTCTC 2 cut(s) 2349, 3074
BsaJI CCNNGG 6 cut(s) 720, 816, 981, 1214, 1375, 1781
Bse1I ACTGG 3 cut(s) 538, 2561, 2973
Bse21I CCTNAGG 2 cut(s) 797, 2096
Bse3DI GCAATG 3 cut(s) 28, 115, 1736
BseBI CCWGG 4 cut(s) 389, 721, 824, 1318
BseDI CCNNGG 6 cut(s) 720, 816, 981, 1214, 1375, 1781
BseMI GCAATG 3 cut(s) 28, 115, 1736
BseMII CTCAG 7 cut(s) 768, 811, 1061, 1110, 1634, 2052, 2087
BseNI ACTGG 3 cut(s) 538, 2561, 2973
BsePI GCGCGC 1 cut(s) 580
BseSI GKGCMC 1 cut(s) 2749
BseYI CCCAGC 2 cut(s) 576, 2749
BsgI GTGCAG 2 cut(s) 1401, 1905
Bsh1236I CGCG 6 cut(s) 68, 127, 186, 465, 582, 588
Bsh1285I CGRYCG 1 cut(s) 592
BshFI GGCC 4 cut(s) 794, 822, 1364, 1776
BshNI GGYRCC 1 cut(s) 1588
BsiEI CGRYCG 1 cut(s) 592
BsiHKAI GWGCWC 4 cut(s) 159, 1048, 2037, 2960
BsiHKCI CYCGRG 2 cut(s) 401, 440
BsiSI CCGG 4 cut(s) 376, 844, 929, 2608
BsiWI CGTACG 1 cut(s) 2565
BslFI GGGAC 5 cut(s) 77, 550, 977, 1277, 2782
BsmBI CGTCTC 1 cut(s) 631
BsmFI GGGAC 5 cut(s) 77, 550, 977, 1277, 2782
BsmI GAATGC 2 cut(s) 767, 918
BsnI GGCC 4 cut(s) 794, 822, 1364, 1776
Bso31I GGTCTC 2 cut(s) 2349, 3074
BsoBI CYCGRG 2 cut(s) 401, 440
Bsp1286I GDGCHC 8 cut(s) 159, 1048, 1711, 1855, 1892, 2037, 2749, 2960
Bsp1407I TGTACA 1 cut(s) 2652
Bsp19I CCATGG 2 cut(s) 981, 1214
BspANI GGCC 4 cut(s) 794, 822, 1364, 1776
BspCNI CTCAG 7 cut(s) 767, 810, 1060, 1111, 1635, 2051, 2088
BspFNI CGCG 6 cut(s) 68, 127, 186, 465, 582, 588
BspHI TCATGA 2 cut(s) 219, 2700
BspLI GGNNCC 6 cut(s) 1198, 1590, 1933, 2168, 2547, 2974
BspMAI CTGCAG 2 cut(s) 1813, 3067
BspMI ACCTGC 5 cut(s) 1062, 1218, 1373, 3056, 3061
BspPI GGATC 7 cut(s) 130, 1191, 1204, 2540, 2553, 2967, 2980
BspQI GCTCTTC 2 cut(s) 1956, 2716
BspT107I GGYRCC 1 cut(s) 1588
BspTNI GGTCTC 2 cut(s) 2349, 3074
BsrBI CCGCTC 2 cut(s) 38, 2440
BsrDI GCAATG 3 cut(s) 28, 115, 1736
BsrGI TGTACA 1 cut(s) 2652
BsrI ACTGG 3 cut(s) 538, 2561, 2973
BssECI CCNNGG 6 cut(s) 720, 816, 981, 1214, 1375, 1781
BssHII GCGCGC 1 cut(s) 580
BssT1I CCWWGG 4 cut(s) 981, 1214, 1375, 1781
Bst2UI CCWGG 4 cut(s) 389, 721, 824, 1318
Bst4CI ACNGT 9 cut(s) 817, 1040, 1268, 1457, 1699, 1845, 2116, 2286, 2665
Bst6I CTCTTC 5 cut(s) 704, 1443, 1956, 2103, 2716
BstAPI GCANNNNNTGC 1 cut(s) 1690
BstAUI TGTACA 1 cut(s) 2652
BstBAI YACGTR 1 cut(s) 2565
BstDEI CTNAG 9 cut(s) 754, 797, 1047, 1119, 1643, 1765, 2038, 2096, 2778
BstDSI CCRYGG 3 cut(s) 816, 981, 1214
BstEII GGTNACC 1 cut(s) 811
BstENI CCTNNNNNAGG 1 cut(s) 788
BstFNI CGCG 6 cut(s) 68, 127, 186, 465, 582, 588
BstHHI GCGC 4 cut(s) 467, 582, 584, 2002
BstMCI CGRYCG 1 cut(s) 592
BstNI CCWGG 4 cut(s) 389, 721, 824, 1318
BstNSI RCATGY 3 cut(s) 862, 2615, 2653
BstPI GGTNACC 1 cut(s) 811
BstSCI CCNGG 7 cut(s) 375, 387, 719, 822, 843, 927, 1316
BstSFI CTRYAG 2 cut(s) 1809, 3063
BstSLI GKGCMC 1 cut(s) 2749
BstSNI TACGTA 1 cut(s) 2565
BstUI CGCG 6 cut(s) 68, 127, 186, 465, 582, 588
BstV2I GAAGAC 2 cut(s) 2450, 2751
BstX2I RGATCY 5 cut(s) 135, 570, 1196, 2545, 2972
BstXI CCANNNNNNTGG 2 cut(s) 1633, 1788
BstYI RGATCY 5 cut(s) 135, 570, 1196, 2545, 2972
Bsu36I CCTNAGG 2 cut(s) 797, 2096
BsuRI GGCC 4 cut(s) 794, 822, 1364, 1776
BtgI CCRYGG 3 cut(s) 816, 981, 1214
BtrI CACGTC 2 cut(s) 475, 688
BtsI GCAGTG 1 cut(s) 1922
BtsIMutI CAGTG 4 cut(s) 545, 1922, 2661, 2749
BveI ACCTGC 5 cut(s) 1062, 1218, 1373, 3056, 3061
CaiI CAGNNNCTG 2 cut(s) 2663, 3023
CciI TCATGA 2 cut(s) 219, 2700
CfoI GCGC 4 cut(s) 467, 582, 584, 2002
Cfr13I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
CseI GACGC 3 cut(s) 74, 133, 650
CsiI ACCWGGT 1 cut(s) 387
Csp6I GTAC 6 cut(s) 385, 1769, 2454, 2566, 2653, 2731
CviQI GTAC 6 cut(s) 385, 1769, 2454, 2566, 2653, 2731
DdeI CTNAG 9 cut(s) 754, 797, 1047, 1119, 1643, 1765, 2038, 2096, 2778
DrdI GACNNNNNNGTC 2 cut(s) 212, 350
DseDI GACNNNNNNGTC 2 cut(s) 212, 350
Eam1104I CTCTTC 5 cut(s) 704, 1443, 1956, 2103, 2716
EarI CTCTTC 5 cut(s) 704, 1443, 1956, 2103, 2716
EciI GGCGGA 3 cut(s) 190, 220, 436
Ecl136II GAGCTC 3 cut(s) 157, 1046, 2035
Eco105I TACGTA 1 cut(s) 2565
Eco130I CCWWGG 4 cut(s) 981, 1214, 1375, 1781
Eco24I GRGCYC 6 cut(s) 159, 1048, 1711, 1855, 1892, 2037
Eco31I GGTCTC 2 cut(s) 2349, 3074
Eco47I GGWCC 3 cut(s) 781, 1475, 2473
Eco53kI GAGCTC 3 cut(s) 157, 1046, 2035
Eco57I CTGAAG 2 cut(s) 943, 2697
Eco81I CCTNAGG 2 cut(s) 797, 2096
Eco88I CYCGRG 2 cut(s) 401, 440
Eco91I GGTNACC 1 cut(s) 811
EcoICRI GAGCTC 3 cut(s) 157, 1046, 2035
EcoNI CCTNNNNNAGG 1 cut(s) 788
EcoO109I RGGNCCY 1 cut(s) 793
EcoO65I GGTNACC 1 cut(s) 811
EcoRI GAATTC 2 cut(s) 952, 1370
EcoRII CCWGG 4 cut(s) 387, 719, 822, 1316
EcoT14I CCWWGG 4 cut(s) 981, 1214, 1375, 1781
EcoT38I GRGCYC 6 cut(s) 159, 1048, 1711, 1855, 1892, 2037
ErhI CCWWGG 4 cut(s) 981, 1214, 1375, 1781
Esp3I CGTCTC 1 cut(s) 631
FalI AAGNNNNNCTT 2 cut(s) 866, 898
FaqI GGGAC 5 cut(s) 77, 550, 977, 1277, 2782
FauI CCCGC 4 cut(s) 254, 461, 593, 719
FblI GTMKAC 3 cut(s) 393, 552, 3032
FriOI GRGCYC 6 cut(s) 159, 1048, 1711, 1855, 1892, 2037
FspBI CTAG 7 cut(s) 60, 1376, 1848, 2060, 2330, 2499, 2900
GlaI GCGC 4 cut(s) 466, 581, 583, 2001
GsaI CCCAGC 2 cut(s) 580, 2753
GsuI CTGGAG 3 cut(s) 515, 1300, 1571
HaeIII GGCC 4 cut(s) 794, 822, 1364, 1776
HapII CCGG 4 cut(s) 376, 844, 929, 2608
HgaI GACGC 3 cut(s) 74, 133, 650
HhaI GCGC 4 cut(s) 467, 582, 584, 2002
Hin6I GCGC 4 cut(s) 465, 580, 582, 2000
HinP1I GCGC 4 cut(s) 465, 580, 582, 2000
HincII GTYRAC 4 cut(s) 164, 394, 553, 3033
HindII GTYRAC 4 cut(s) 164, 394, 553, 3033
HindIII AAGCTT 4 cut(s) 944, 1014, 1168, 2832
HpaII CCGG 4 cut(s) 376, 844, 929, 2608
Hpy166II GTNNAC 9 cut(s) 164, 265, 394, 478, 553, 1232, 1312, 2655, 3033
Hpy8I GTNNAC 9 cut(s) 164, 265, 394, 478, 553, 1232, 1312, 2655, 3033
Hpy99I CGWCG 9 cut(s) 19, 124, 127, 173, 428, 554, 644, 659, 671
HpyCH4III ACNGT 9 cut(s) 817, 1040, 1268, 1457, 1699, 1845, 2116, 2286, 2665
HpyCH4IV ACGT 4 cut(s) 459, 474, 687, 2564
HpyF3I CTNAG 9 cut(s) 754, 797, 1047, 1119, 1643, 1765, 2038, 2096, 2778
HpySE526I ACGT 4 cut(s) 459, 474, 687, 2564
HspAI GCGC 4 cut(s) 465, 580, 582, 2000
LguI GCTCTTC 2 cut(s) 1956, 2716
LweI GCATC 8 cut(s) 102, 366, 908, 1075, 1489, 2062, 2323, 2696
MabI ACCWGGT 1 cut(s) 387
MaeI CTAG 7 cut(s) 60, 1376, 1848, 2060, 2330, 2499, 2900
MaeII ACGT 4 cut(s) 459, 474, 687, 2564
MaeIII GTNAC 4 cut(s) 811, 1824, 1972, 3041
MbiI CCGCTC 2 cut(s) 38, 2440
MflI RGATCY 5 cut(s) 135, 570, 1196, 2545, 2972
MhlI GDGCHC 8 cut(s) 159, 1048, 1711, 1855, 1892, 2037, 2749, 2960
MmeI TCCRAC 4 cut(s) 366, 639, 951, 2268
MroXI GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
MseI TTAA 7 cut(s) 1350, 1577, 1968, 2643, 2727, 2925, 2963
MslI CAYNNNNRTG 1 cut(s) 986
MspA1I CMGCKG 5 cut(s) 1098, 1118, 1515, 1568, 3023
MspI CCGG 4 cut(s) 376, 844, 929, 2608
MspR9I CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
Mva1269I GAATGC 2 cut(s) 767, 918
MvaI CCWGG 4 cut(s) 389, 721, 824, 1318
MvnI CGCG 6 cut(s) 68, 127, 186, 465, 582, 588
NciI CCSGG 3 cut(s) 377, 845, 929
NcoI CCATGG 2 cut(s) 981, 1214
NlaIV GGNNCC 6 cut(s) 1198, 1590, 1933, 2168, 2547, 2974
NmuCI GTSAC 3 cut(s) 811, 1972, 3041
NspI RCATGY 3 cut(s) 862, 2615, 2653
PaeI GCATGC 1 cut(s) 2615
PaeR7I CTCGAG 1 cut(s) 440
PagI TCATGA 2 cut(s) 219, 2700
PaqCI CACCTGC 1 cut(s) 1373
PauI GCGCGC 1 cut(s) 580
PciSI GCTCTTC 2 cut(s) 1956, 2716
PcsI WCGNNNNNNNCGW 4 cut(s) 201, 399, 663, 2570
PctI GAATGC 2 cut(s) 767, 918
PdmI GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
Pfl23II CGTACG 1 cut(s) 2565
PflMI CCANNNNNTGG 1 cut(s) 2556
Ppu21I YACGTR 1 cut(s) 2565
PshBI ATTAAT 1 cut(s) 1350
Psp124BI GAGCTC 3 cut(s) 159, 1048, 2037
Psp6I CCWGG 4 cut(s) 387, 719, 822, 1316
PspEI GGTNACC 1 cut(s) 811
PspFI CCCAGC 2 cut(s) 576, 2749
PspGI CCWGG 4 cut(s) 387, 719, 822, 1316
PspLI CGTACG 1 cut(s) 2565
PspN4I GGNNCC 6 cut(s) 1198, 1590, 1933, 2168, 2547, 2974
PspPI GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
PspXI VCTCGAGB 1 cut(s) 440
PstI CTGCAG 2 cut(s) 1813, 3067
PstNI CAGNNNCTG 2 cut(s) 2663, 3023
PsuI RGATCY 5 cut(s) 135, 570, 1196, 2545, 2972
PteI GCGCGC 1 cut(s) 580
PvuII CAGCTG 2 cut(s) 1515, 1568
RsaI GTAC 6 cut(s) 386, 1770, 2455, 2567, 2654, 2732
RsaNI GTAC 6 cut(s) 385, 1769, 2454, 2566, 2653, 2731
RseI CAYNNNNRTG 1 cut(s) 986
SacI GAGCTC 3 cut(s) 159, 1048, 2037
SalI GTCGAC 3 cut(s) 392, 551, 3031
SapI GCTCTTC 2 cut(s) 1956, 2716
SaqAI TTAA 7 cut(s) 1350, 1577, 1968, 2643, 2727, 2925, 2963
Sau96I GGNCC 6 cut(s) 781, 793, 820, 1475, 1775, 2473
ScaI AGTACT 2 cut(s) 1770, 2455
ScrFI CCNGG 7 cut(s) 377, 389, 721, 824, 845, 929, 1318
SduI GDGCHC 8 cut(s) 159, 1048, 1711, 1855, 1892, 2037, 2749, 2960
SexAI ACCWGGT 1 cut(s) 387
SfaNI GCATC 8 cut(s) 102, 366, 908, 1075, 1489, 2062, 2323, 2696
SfcI CTRYAG 2 cut(s) 1809, 3063
Sfr274I CTCGAG 1 cut(s) 440
SinI GGWCC 3 cut(s) 781, 1475, 2473
SlaI CTCGAG 1 cut(s) 440
SmiMI CAYNNNNRTG 1 cut(s) 986
SmlI CTYRAG 7 cut(s) 440, 1181, 1331, 1479, 2346, 2386, 2881
SmoI CTYRAG 7 cut(s) 440, 1181, 1331, 1479, 2346, 2386, 2881
SnaBI TACGTA 1 cut(s) 2565
SphI GCATGC 1 cut(s) 2615
SspI AATATT 1 cut(s) 1348
SspMI CTAG 7 cut(s) 60, 1376, 1848, 2060, 2330, 2499, 2900
SstI GAGCTC 3 cut(s) 159, 1048, 2037
StyD4I CCNGG 7 cut(s) 375, 387, 719, 822, 843, 927, 1316
StyI CCWWGG 4 cut(s) 981, 1214, 1375, 1781
TaaI ACNGT 9 cut(s) 817, 1040, 1268, 1457, 1699, 1845, 2116, 2286, 2665
TaiI ACGT 4 cut(s) 462, 477, 690, 2567
TaqII GACCGA 1 cut(s) 769
TatI WGTACW 3 cut(s) 1768, 2453, 2652
TauI GCSGC 8 cut(s) 41, 44, 47, 50, 452, 918, 1101, 3023
Tru1I TTAA 7 cut(s) 1350, 1577, 1968, 2643, 2727, 2925, 2963
Tru9I TTAA 7 cut(s) 1350, 1577, 1968, 2643, 2727, 2925, 2963
TscAI CASTG 4 cut(s) 545, 1929, 2668, 2749
TseFI GTSAC 3 cut(s) 811, 1972, 3041
Tsp45I GTSAC 3 cut(s) 811, 1972, 3041
TspGWI ACGGA 5 cut(s) 149, 250, 340, 378, 2198
TspRI CASTG 4 cut(s) 545, 1929, 2668, 2749
Van91I CCANNNNNTGG 1 cut(s) 2556
VpaK11BI GGWCC 3 cut(s) 781, 1475, 2473
VspI ATTAAT 1 cut(s) 1350
XagI CCTNNNNNAGG 1 cut(s) 788
XapI RAATTY 3 cut(s) 952, 1370, 2270
XbaI TCTAGA 3 cut(s) 1847, 2059, 2329
XceI RCATGY 3 cut(s) 862, 2615, 2653
XcmI CCANNNNNNNNNTGG 1 cut(s) 988
XhoI CTCGAG 1 cut(s) 440
XmaJI CCTAGG 1 cut(s) 1375
XmiI GTMKAC 3 cut(s) 393, 552, 3032
XmnI GAANNNNTTC 5 cut(s) 837, 956, 1190, 1236, 2223
XspI CTAG 7 cut(s) 60, 1376, 1848, 2060, 2330, 2499, 2900
ZrmI AGTACT 2 cut(s) 1770, 2455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.