Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0005295

Physical Location & Seq

Genomic Coordinates Forward (+)

39631851 .. 39639377

Gene Structure 7527 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G028830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGCTCCCAAGTTGTTTCGGTCCTTTGCGAGGCCCTCAGGGTTATTCAGGTCACTGTGGGCCAGGTTGGGGAATTGTTTCTCCGGGTTTTCAACGACATGCCCCTGTTTTACAAGGTGGTCTGGGTTGCCCTCCTGCATCTCAACTCTTCGGCGGCATTCCCAACCCAGATGAGGAGGTCAAGCTTTGGAATTCCTTCAGGGACAAGTTGGAGTCTGCCATGGTAATGCTGGACAAAGATGATATTGCGAAAGCTTCTTCTTCATGGCTTGCGGACTGTGGAGCTCAGATGGTGGATAAGATCAATGGCAGGTATCTCATTGATGCTATTGGCAGCGGCAAAGAGCTTGCCTCCGCCGAGAGGTTGATAAGGGAGACTATGAATAGCAAAGAGGTCTTGGAAGGAAGCTTGGAGTGGCTCAAGAAAGTTTTCGGCTCCCAAATTGACCTGCCATGGAGTAGAATGAGTGAACTTGTTCTGGGAGATGATTCAGACCTCTGGGACAGTATCTTTGAAAGTGGATTTGTTGGGAGGATGAAGGTGATTGTGGACTCCAGGTTTGAGAAGCTCAAGACAGCTGCCAATATTAATGATGGTGAGGCCATTGAATTCCTAGGTGCAGGTGGTGGAGTTTGGTTTATAGAATCCAAATCCAATAGTAAGAAGGCTACTGCTCTGCCATGTGAAGAGAACTGTCTCAATTTCTATTTTGGTAATCAAGTTAGAGATATTAGGGATGCGGTGGATAGCAGCTGTCAGGATGTGCTTGATGACCTCCTCTCTTTTCTGGAATCTCCAAAGGCAGCTGTCAGATTAAAGAATCTGGCACCCTATCTACAAGACAAGTGTTTCCAAACTATATCCATCATATTGGAGCAACTGAGTAGTGAGCTTGATAATTTGGAAAAGGGCAGCAACAAGCAAAAGCTGCTAACCGTTGAAAGGGCTCTATTCATTGGGAGACTCTTGTTTGCATTGCAGAATCACTCCAAGCACATTCCCTTAGTACTTGGCCCTCCAAGGTCTTGGGTGAATGAAAGTGAGTCTGCAGTTTTCGACAAGTTACCATCCTTATTGAGACAGTCTAGAGCCCCCACCGATTCTCATGTGCTTGATAGCCCCTTGGGCTCTAAAAGACACACCTCATCTGCTACTGCTGCACTGCTTGGAGCCAGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATGTGACTATGCGAAATCTCCGCATTAGAGCGCACACTTTCTGGATGACTTGGCTATCCGATGAGCTCTCAGTTATACTTGCCCGTGATCTAGAAAAGGACGATGCTTTGTCATCTTCAACTCCCCTGAGGGGTTGGGAAGAGACAGTAGTTAGGCAAGAGCAGTCTGATGATAACCAATCAGAGATGAAAATATGGCTCCCATCCATGCCTTCTCTCTATGTTGTCTCATTTCTATTCCGTATATGTGAAGAAGTTCATCGAATAGGAGGTCATGTCCTTGACAAAATAATTCTGCAAAAATTTGCATTACAACTGTTGGAAAAGGTCATTGGCATTTATGGCGACTTCCTTTCTAATCTAGATGCTGGTGGGTCTCAAGTGTCAGAAAAAGGAGTTTTGCAGATTTTGTTAGACTTGAGATTTGTTTTTGATGTCCTCTCTGGGGGTGATTCTAATTTGAATGAGGAGCGGAAGACAAAAAGTACTTTCAGAAGGAAGCAGGACCAAAGCCGTATGAAGTCAGCTACTAGAGAGCGTTTTGATGGGTTGATACATCATTTTTCACAAAGATTGGATCCCATAGACTGGCTTACGTACGAGCCGTATCTCTGGGAAAATGAGAAGCAGTCCTACCTCCGGCATGCCGTCCTTTTTGGATTCTTTGTGCAACTTAATCGCATGTACACAGACACTGTTCAGAAACTTCCTACTAATTCAGAGTCCAATATCATGAGATGCTCTTCAGTTCCTCGCTTTAAGTACCTTCCAATCAGTGCCCCAGCGTTGTCTTCAAGGGGGACAGCAGCTAAGACGTCCATTCAAACATCTTCCGATGATATTTCTTCAAGAAGTAGCTGGAAAGCTTATACAAATGGAGAGCTGTCCAGAAGTATTGATTTGGATGATAACTCAAGTTTTGGGGTTGCAGTACCAATCTTAAAATCTTTCATGCAGGCTGGAAGTAGATTTGGAGAGAGCACATTAAAACTGGGATCCATGCTAACAGATGGGCAAGTGGGCATATTCAAGGATAGATCAGCCGCCGCCATGTCGACATTTGGTGACATTCTACCTGCCCATGCTGCAGGTCTCCTTTCATCATTCACAGCTTCCAGATCAGACTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps51

Protein Analysis

778

Amino Acids

86.31

Weight (kDa)

5.84

Isoelectric Point (pI)

50.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16300 AT5G16300 AT5G16300 AT5G16300
fragaria_vesca	FvH4_3g34230 FvH4_5g28760 FvH4_5g28760 FvH4_5g28760 FvH4_5g28760
malus_domestica	MD08G1237500.v1.1 MD15G1429400.v1.1
prunus_persica	Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1 Prupe.1G575000_v2.0.a1
pyrus_communis	pycom08g20610 pycom15g38000
rosa_chinensis	RchiOBHm_Chr7g0220971
rosa_laevigata	RLG00000002190
rosa_multiflora	Rmu_sc0002105.1_g000025
rosa_roxburghii	Rroxscaffold_3G00238840
rosa_rugosa	Rorug07G0198700 Rorug07G0198800
rosa_samantha	Rh7AG338900 Rh7BG329700 Rh7CG357000 Rh7DG337700
rosa_wichuraiana	Rw7G028830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	611
AatII	GACGTC	1 cut(s)	2024
Acc36I	ACCTGC	5 cut(s)	300, 456, 611, 2285, 2290
AccB1I	GGYRCC	1 cut(s)	826
AccB7I	CCANNNNNTGG	1 cut(s)	1794
AccBSI	CCGCTC	1 cut(s)	1678
AccI	GTMKAC	1 cut(s)	2261
AciI	CCGC	9 cut(s)	153, 272, 336, 354, 740, 1228, 1678, 2250, 2253
AclWI	GGATC	4 cut(s)	1778, 1791, 2196, 2209
AcsI	RAATTY	3 cut(s)	190, 608, 1508
AcuI	CTGAAG	2 cut(s)	181, 1935
AcyI	GRCGYC	1 cut(s)	2021
AfaI	GTAC	6 cut(s)	1008, 1693, 1805, 1892, 1970, 2139
AfiI	CCNNNNNNNGG	9 cut(s)	29, 68, 172, 360, 942, 1337, 1651, 1794, 1845
AjnI	CCWGG	2 cut(s)	61, 554
AjuI	GAANNNNNNNTTGG	2 cut(s)	1521, 1553
Alw21I	GWGCWC	3 cut(s)	286, 1275, 2189
Alw26I	GTCTC	8 cut(s)	368, 701, 955, 1072, 1343, 1438, 1587, 2303
AlwI	GGATC	4 cut(s)	1778, 1791, 2196, 2209
AlwNI	CAGNNNCTG	1 cut(s)	1901
AoxI	GGCC	4 cut(s)	31, 59, 600, 1012
ApeKI	GCWGC	9 cut(s)	333, 578, 750, 803, 912, 928, 1157, 2012, 2291
ApoI	RAATTY	3 cut(s)	190, 608, 1508
ArsI	GACNNNNNNTTYG	8 cut(s)	494, 526, 542, 574, 1462, 1494, 1613, 1645
AseI	ATTAAT	1 cut(s)	588
Asp700I	GAANNNNTTC	5 cut(s)	76, 194, 428, 474, 1461
AspA2I	CCTAGG	1 cut(s)	613
AspLEI	GCGC	1 cut(s)	1240
AspS9I	GGNCC	5 cut(s)	20, 32, 59, 1013, 1711
AsuC2I	CCSGG	1 cut(s)	84
AsuHPI	GGTGA	5 cut(s)	553, 608, 1042, 1667, 2282
AvaII	GGWCC	2 cut(s)	20, 1711
AvrII	CCTAGG	1 cut(s)	613
AxyI	CCTNAGG	2 cut(s)	36, 1334
BaeGI	GKGCMC	1 cut(s)	1987
BamHI	GGATCC	2 cut(s)	1783, 2201
BanI	GGYRCC	1 cut(s)	826
BanII	GRGCYC	5 cut(s)	286, 949, 1093, 1130, 1275
BarI	GAAGNNNNNNTAC	2 cut(s)	1823, 1855
BbsI	GAAGAC	2 cut(s)	1688, 1989
Bbv12I	GWGCWC	3 cut(s)	286, 1275, 2189
BbvI	GCAGC	9 cut(s)	345, 565, 762, 815, 915, 924, 1144, 2024, 2278
BccI	CCATC	7 cut(s)	283, 587, 872, 1075, 1417, 1745, 2210
BceAI	ACGGC	3 cut(s)	1704, 1795, 1838
BcgI	CGANNNNNNTGC	2 cut(s)	1865, 1899
BciT130I	CCWGG	2 cut(s)	63, 556
BcnI	CCSGG	1 cut(s)	84
BcoDI	GTCTC	8 cut(s)	368, 701, 955, 1072, 1343, 1438, 1587, 2303
BfaI	CTAG	5 cut(s)	614, 1086, 1298, 1568, 1737
BfmI	CTRYAG	2 cut(s)	1047, 2292
BfuAI	ACCTGC	5 cut(s)	300, 456, 611, 2285, 2290
BglI	GCCNNNNNGGC	1 cut(s)	1125
BlnI	CCTAGG	1 cut(s)	613
BmcAI	AGTACT	2 cut(s)	1008, 1693
Bme1390I	CCNGG	3 cut(s)	63, 84, 556
Bme18I	GGWCC	2 cut(s)	20, 1711
BmgT120I	GGNCC	5 cut(s)	20, 32, 59, 1013, 1711
BmiI	GGNNCC	6 cut(s)	436, 828, 1171, 1406, 1785, 2203
BmrFI	CCNGG	3 cut(s)	63, 84, 556
BmrI	ACTGGG	1 cut(s)	2207
BmsI	GCATC	6 cut(s)	146, 313, 727, 1300, 1561, 1934
BmuI	ACTGGG	1 cut(s)	2207
BpiI	GAAGAC	2 cut(s)	1688, 1989
BplI	GAGNNNNNCTC	2 cut(s)	335, 367
BpmI	CTGGAG	1 cut(s)	538
BpuEI	CTTGAG	5 cut(s)	404, 554, 1569, 1645, 2104
BpuMI	CCSGG	1 cut(s)	84
BsaAI	YACGTR	1 cut(s)	1803
BsaHI	GRCGYC	1 cut(s)	2021
BsaI	GGTCTC	2 cut(s)	1587, 2303
BsaJI	CCNNGG	5 cut(s)	219, 452, 613, 1019, 1122
BsaXI	ACNNNNNCTCC	2 cut(s)	1467, 1497
Bsc4I	CCNNNNNNNGG	9 cut(s)	29, 68, 172, 360, 942, 1337, 1651, 1794, 1845
Bse1I	ACTGG	2 cut(s)	1799, 2202
Bse21I	CCTNAGG	2 cut(s)	36, 1334
Bse3DI	GCAATG	1 cut(s)	974
BseBI	CCWGG	2 cut(s)	63, 556
BseDI	CCNNGG	5 cut(s)	219, 452, 613, 1019, 1122
BseGI	GGATG	7 cut(s)	540, 742, 766, 1067, 1257, 1409, 2116
BseLI	CCNNNNNNNGG	9 cut(s)	29, 68, 172, 360, 942, 1337, 1651, 1794, 1845
BseMI	GCAATG	1 cut(s)	974
BseMII	CTCAG	5 cut(s)	50, 299, 872, 1290, 1325
BseNI	ACTGG	2 cut(s)	1799, 2202
BseRI	GAGGAG	3 cut(s)	188, 767, 1688
BseSI	GKGCMC	1 cut(s)	1987
BseXI	GCAGC	9 cut(s)	345, 565, 762, 815, 915, 924, 1144, 2024, 2278
BseYI	CCCAGC	1 cut(s)	1987
BsgI	GTGCAG	2 cut(s)	639, 1143
BshFI	GGCC	4 cut(s)	33, 61, 602, 1014
BshNI	GGYRCC	1 cut(s)	826
BsiHKAI	GWGCWC	3 cut(s)	286, 1275, 2189
BsiSI	CCGG	2 cut(s)	83, 1846
BsiWI	CGTACG	1 cut(s)	1803
BslFI	GGGAC	3 cut(s)	215, 515, 2020
BslI	CCNNNNNNNGG	9 cut(s)	29, 68, 172, 360, 942, 1337, 1651, 1794, 1845
BsmAI	GTCTC	8 cut(s)	368, 701, 955, 1072, 1343, 1438, 1587, 2303
BsmFI	GGGAC	3 cut(s)	215, 515, 2020
BsmI	GAATGC	1 cut(s)	156
BsnI	GGCC	4 cut(s)	33, 61, 602, 1014
Bso31I	GGTCTC	2 cut(s)	1587, 2303
Bsp1286I	GDGCHC	7 cut(s)	286, 949, 1093, 1130, 1275, 1987, 2189
Bsp1407I	TGTACA	1 cut(s)	1890
Bsp143I	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
Bsp19I	CCATGG	2 cut(s)	219, 452
BspACI	CCGC	9 cut(s)	153, 272, 336, 354, 740, 1228, 1678, 2250, 2253
BspANI	GGCC	4 cut(s)	33, 61, 602, 1014
BspCNI	CTCAG	5 cut(s)	49, 298, 873, 1289, 1326
BspHI	TCATGA	1 cut(s)	1938
BspLI	GGNNCC	6 cut(s)	436, 828, 1171, 1406, 1785, 2203
BspMAI	CTGCAG	2 cut(s)	1051, 2296
BspMI	ACCTGC	5 cut(s)	300, 456, 611, 2285, 2290
BspPI	GGATC	4 cut(s)	1778, 1791, 2196, 2209
BspQI	GCTCTTC	2 cut(s)	1194, 1954
BspT107I	GGYRCC	1 cut(s)	826
BspTNI	GGTCTC	2 cut(s)	1587, 2303
BsrBI	CCGCTC	1 cut(s)	1678
BsrDI	GCAATG	1 cut(s)	974
BsrGI	TGTACA	1 cut(s)	1890
BsrI	ACTGG	2 cut(s)	1799, 2202
BssECI	CCNNGG	5 cut(s)	219, 452, 613, 1019, 1122
BssMI	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
BssNI	GRCGYC	1 cut(s)	2021
BssT1I	CCWWGG	5 cut(s)	219, 452, 613, 1019, 1122
Bst2UI	CCWGG	2 cut(s)	63, 556
Bst4CI	ACNGT	9 cut(s)	56, 278, 506, 695, 937, 1083, 1354, 1524, 1903
Bst6I	CTCTTC	5 cut(s)	152, 681, 1194, 1341, 1954
BstACI	GRCGYC	1 cut(s)	2021
BstAPI	GCANNNNNTGC	1 cut(s)	928
BstAUI	TGTACA	1 cut(s)	1890
BstBAI	YACGTR	1 cut(s)	1803
BstC8I	GCNNGC	6 cut(s)	270, 348, 1174, 1186, 1851, 2163
BstDEI	CTNAG	7 cut(s)	36, 285, 881, 1003, 1276, 1334, 2016
BstDSI	CCRYGG	2 cut(s)	219, 452
BstENI	CCTNNNNNAGG	1 cut(s)	27
BstF5I	GGATG	7 cut(s)	540, 742, 766, 1067, 1257, 1409, 2116
BstHHI	GCGC	1 cut(s)	1240
BstKTI	GATC	6 cut(s)	303, 1297, 1786, 2204, 2246, 2327
BstMAI	GTCTC	8 cut(s)	368, 701, 955, 1072, 1343, 1438, 1587, 2303
BstMBI	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
BstMWI	GCNNNNNNNGC	5 cut(s)	928, 1125, 1157, 1548, 2291
BstNI	CCWGG	2 cut(s)	63, 556
BstNSI	RCATGY	3 cut(s)	101, 1853, 1891
BstSCI	CCNGG	3 cut(s)	61, 82, 554
BstSFI	CTRYAG	2 cut(s)	1047, 2292
BstSLI	GKGCMC	1 cut(s)	1987
BstSNI	TACGTA	1 cut(s)	1803
BstV1I	GCAGC	9 cut(s)	345, 565, 762, 815, 915, 924, 1144, 2024, 2278
BstV2I	GAAGAC	2 cut(s)	1688, 1989
BstX2I	RGATCY	2 cut(s)	1783, 2201
BstXI	CCANNNNNNTGG	2 cut(s)	871, 1026
BstYI	RGATCY	2 cut(s)	1783, 2201
Bsu36I	CCTNAGG	2 cut(s)	36, 1334
BsuRI	GGCC	4 cut(s)	33, 61, 602, 1014
BtgI	CCRYGG	2 cut(s)	219, 452
BtsCI	GGATG	7 cut(s)	540, 742, 766, 1067, 1257, 1409, 2116
BtsI	GCAGTG	1 cut(s)	1160
BtsIMutI	CAGTG	4 cut(s)	52, 1160, 1899, 1987
BveI	ACCTGC	5 cut(s)	300, 456, 611, 2285, 2290
Cac8I	GCNNGC	6 cut(s)	270, 348, 1174, 1186, 1851, 2163
CaiI	CAGNNNCTG	1 cut(s)	1901
CciI	TCATGA	1 cut(s)	1938
CfoI	GCGC	1 cut(s)	1240
Cfr13I	GGNCC	5 cut(s)	20, 32, 59, 1013, 1711
Csp6I	GTAC	6 cut(s)	1007, 1692, 1804, 1891, 1969, 2138
CviQI	GTAC	6 cut(s)	1007, 1692, 1804, 1891, 1969, 2138
DdeI	CTNAG	7 cut(s)	36, 285, 881, 1003, 1276, 1334, 2016
DpnI	GATC	6 cut(s)	302, 1296, 1785, 2203, 2245, 2326
DpnII	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
Eam1104I	CTCTTC	5 cut(s)	152, 681, 1194, 1341, 1954
EarI	CTCTTC	5 cut(s)	152, 681, 1194, 1341, 1954
EciI	GGCGGA	1 cut(s)	343
Ecl136II	GAGCTC	2 cut(s)	284, 1273
Eco105I	TACGTA	1 cut(s)	1803
Eco130I	CCWWGG	5 cut(s)	219, 452, 613, 1019, 1122
Eco24I	GRGCYC	5 cut(s)	286, 949, 1093, 1130, 1275
Eco31I	GGTCTC	2 cut(s)	1587, 2303
Eco47I	GGWCC	2 cut(s)	20, 1711
Eco53kI	GAGCTC	2 cut(s)	284, 1273
Eco57I	CTGAAG	2 cut(s)	181, 1935
Eco81I	CCTNAGG	2 cut(s)	36, 1334
EcoICRI	GAGCTC	2 cut(s)	284, 1273
EcoNI	CCTNNNNNAGG	1 cut(s)	27
EcoO109I	RGGNCCY	1 cut(s)	32
EcoRI	GAATTC	2 cut(s)	190, 608
EcoRII	CCWGG	2 cut(s)	61, 554
EcoT14I	CCWWGG	5 cut(s)	219, 452, 613, 1019, 1122
EcoT38I	GRGCYC	5 cut(s)	286, 949, 1093, 1130, 1275
ErhI	CCWWGG	5 cut(s)	219, 452, 613, 1019, 1122
FaqI	GGGAC	3 cut(s)	215, 515, 2020
FblI	GTMKAC	1 cut(s)	2261
FokI	GGATG	7 cut(s)	547, 749, 773, 1054, 1264, 1396, 2123
FriOI	GRGCYC	5 cut(s)	286, 949, 1093, 1130, 1275
FspBI	CTAG	5 cut(s)	614, 1086, 1298, 1568, 1737
GlaI	GCGC	1 cut(s)	1239
GsaI	CCCAGC	1 cut(s)	1991
GsuI	CTGGAG	1 cut(s)	538
HaeIII	GGCC	4 cut(s)	33, 61, 602, 1014
HapII	CCGG	2 cut(s)	83, 1846
HhaI	GCGC	1 cut(s)	1240
Hin1I	GRCGYC	1 cut(s)	2021
Hin6I	GCGC	1 cut(s)	1238
HinP1I	GCGC	1 cut(s)	1238
HincII	GTYRAC	1 cut(s)	2262
HindII	GTYRAC	1 cut(s)	2262
HindIII	AAGCTT	4 cut(s)	182, 252, 406, 2070
HpaII	CCGG	2 cut(s)	83, 1846
HphI	GGTGA	5 cut(s)	553, 608, 1042, 1667, 2282
Hpy166II	GTNNAC	4 cut(s)	470, 550, 1893, 2262
Hpy8I	GTNNAC	4 cut(s)	470, 550, 1893, 2262
HpyAV	CCTTC	7 cut(s)	205, 395, 532, 658, 1428, 1695, 1982
HpyCH4III	ACNGT	9 cut(s)	56, 278, 506, 695, 937, 1083, 1354, 1524, 1903
HpyCH4IV	ACGT	2 cut(s)	1802, 2021
HpyF10VI	GCNNNNNNNGC	5 cut(s)	928, 1125, 1157, 1548, 2291
HpyF3I	CTNAG	7 cut(s)	36, 285, 881, 1003, 1276, 1334, 2016
HpySE526I	ACGT	2 cut(s)	1802, 2021
Hsp92I	GRCGYC	1 cut(s)	2021
HspAI	GCGC	1 cut(s)	1238
Kzo9I	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
LguI	GCTCTTC	2 cut(s)	1194, 1954
LmnI	GCTCC	7 cut(s)	9, 281, 440, 874, 1169, 1410, 1675
Lsp1109I	GCAGC	9 cut(s)	345, 565, 762, 815, 915, 924, 1144, 2024, 2278
LweI	GCATC	6 cut(s)	146, 313, 727, 1300, 1561, 1934
MaeI	CTAG	5 cut(s)	614, 1086, 1298, 1568, 1737
MaeII	ACGT	2 cut(s)	1802, 2021
MaeIII	GTNAC	4 cut(s)	50, 1062, 1210, 2270
MalI	GATC	6 cut(s)	302, 1296, 1785, 2203, 2245, 2326
MbiI	CCGCTC	1 cut(s)	1678
MboI	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
MflI	RGATCY	2 cut(s)	1783, 2201
MhlI	GDGCHC	7 cut(s)	286, 949, 1093, 1130, 1275, 1987, 2189
MlyI	GAGTC	6 cut(s)	221, 545, 957, 1052, 1937, 2324
MmeI	TCCRAC	2 cut(s)	189, 1506
MroXI	GAANNNNTTC	5 cut(s)	76, 194, 428, 474, 1461
MseI	TTAA	7 cut(s)	588, 815, 1206, 1881, 1965, 2147, 2192
MslI	CAYNNNNRTG	1 cut(s)	224
MspA1I	CMGCKG	4 cut(s)	336, 578, 753, 806
MspI	CCGG	2 cut(s)	83, 1846
MspR9I	CCNGG	3 cut(s)	63, 84, 556
Mva1269I	GAATGC	1 cut(s)	156
MvaI	CCWGG	2 cut(s)	63, 556
MwoI	GCNNNNNNNGC	5 cut(s)	928, 1125, 1157, 1548, 2291
NciI	CCSGG	1 cut(s)	84
NcoI	CCATGG	2 cut(s)	219, 452
NdeII	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
NlaIV	GGNNCC	6 cut(s)	436, 828, 1171, 1406, 1785, 2203
NmeAIII	GCCGAG	1 cut(s)	382
NmuCI	GTSAC	3 cut(s)	50, 1210, 2270
NspI	RCATGY	3 cut(s)	101, 1853, 1891
PaeI	GCATGC	1 cut(s)	1853
PagI	TCATGA	1 cut(s)	1938
PaqCI	CACCTGC	1 cut(s)	611
PciSI	GCTCTTC	2 cut(s)	1194, 1954
PcsI	WCGNNNNNNNCGW	1 cut(s)	1808
PctI	GAATGC	1 cut(s)	156
PdmI	GAANNNNTTC	5 cut(s)	76, 194, 428, 474, 1461
PfeI	GAWTC	8 cut(s)	488, 644, 791, 820, 982, 1100, 1658, 1866
Pfl23II	CGTACG	1 cut(s)	1803
PflMI	CCANNNNNTGG	1 cut(s)	1794
PleI	GAGTC	6 cut(s)	220, 545, 957, 1051, 1936, 2324
PpsI	GAGTC	6 cut(s)	220, 545, 957, 1051, 1936, 2324
Ppu21I	YACGTR	1 cut(s)	1803
PshBI	ATTAAT	1 cut(s)	588
Psp124BI	GAGCTC	2 cut(s)	286, 1275
Psp6I	CCWGG	2 cut(s)	61, 554
PspFI	CCCAGC	1 cut(s)	1987
PspGI	CCWGG	2 cut(s)	61, 554
PspLI	CGTACG	1 cut(s)	1803
PspN4I	GGNNCC	6 cut(s)	436, 828, 1171, 1406, 1785, 2203
PspPI	GGNCC	5 cut(s)	20, 32, 59, 1013, 1711
PstI	CTGCAG	2 cut(s)	1051, 2296
PstNI	CAGNNNCTG	1 cut(s)	1901
PsuI	RGATCY	2 cut(s)	1783, 2201
PvuII	CAGCTG	3 cut(s)	578, 753, 806
RsaI	GTAC	6 cut(s)	1008, 1693, 1805, 1892, 1970, 2139
RsaNI	GTAC	6 cut(s)	1007, 1692, 1804, 1891, 1969, 2138
RseI	CAYNNNNRTG	1 cut(s)	224
SacI	GAGCTC	2 cut(s)	286, 1275
SalI	GTCGAC	1 cut(s)	2260
SapI	GCTCTTC	2 cut(s)	1194, 1954
SaqAI	TTAA	7 cut(s)	588, 815, 1206, 1881, 1965, 2147, 2192
Sau3AI	GATC	6 cut(s)	300, 1294, 1783, 2201, 2243, 2324
Sau96I	GGNCC	5 cut(s)	20, 32, 59, 1013, 1711
ScaI	AGTACT	2 cut(s)	1008, 1693
SchI	GAGTC	6 cut(s)	221, 545, 957, 1052, 1937, 2324
ScrFI	CCNGG	3 cut(s)	63, 84, 556
SduI	GDGCHC	7 cut(s)	286, 949, 1093, 1130, 1275, 1987, 2189
SfaNI	GCATC	6 cut(s)	146, 313, 727, 1300, 1561, 1934
SfcI	CTRYAG	2 cut(s)	1047, 2292
SinI	GGWCC	2 cut(s)	20, 1711
SmiMI	CAYNNNNRTG	1 cut(s)	224
SmlI	CTYRAG	5 cut(s)	419, 569, 1584, 1624, 2119
SmoI	CTYRAG	5 cut(s)	419, 569, 1584, 1624, 2119
SnaBI	TACGTA	1 cut(s)	1803
SphI	GCATGC	1 cut(s)	1853
SsiI	CCGC	9 cut(s)	153, 272, 336, 354, 740, 1228, 1678, 2250, 2253
SspI	AATATT	1 cut(s)	586
SspMI	CTAG	5 cut(s)	614, 1086, 1298, 1568, 1737
SstI	GAGCTC	2 cut(s)	286, 1275
StyD4I	CCNGG	3 cut(s)	61, 82, 554
StyI	CCWWGG	5 cut(s)	219, 452, 613, 1019, 1122
TaaI	ACNGT	9 cut(s)	56, 278, 506, 695, 937, 1083, 1354, 1524, 1903
TaiI	ACGT	2 cut(s)	1805, 2024
TaqI	TCGA	3 cut(s)	1056, 1468, 2261
TaqII	GACCGA	1 cut(s)	8
TatI	WGTACW	3 cut(s)	1006, 1691, 1890
TauI	GCSGC	4 cut(s)	156, 339, 2252, 2255
TfiI	GAWTC	8 cut(s)	488, 644, 791, 820, 982, 1100, 1658, 1866
Tru1I	TTAA	7 cut(s)	588, 815, 1206, 1881, 1965, 2147, 2192
Tru9I	TTAA	7 cut(s)	588, 815, 1206, 1881, 1965, 2147, 2192
TscAI	CASTG	4 cut(s)	59, 1167, 1906, 1987
TseFI	GTSAC	3 cut(s)	50, 1210, 2270
TseI	GCWGC	9 cut(s)	333, 578, 750, 803, 912, 928, 1157, 2012, 2291
Tsp45I	GTSAC	3 cut(s)	50, 1210, 2270
TspGWI	ACGGA	1 cut(s)	1436
TspRI	CASTG	4 cut(s)	59, 1167, 1906, 1987
Van91I	CCANNNNNTGG	1 cut(s)	1794
VpaK11BI	GGWCC	2 cut(s)	20, 1711
VspI	ATTAAT	1 cut(s)	588
XagI	CCTNNNNNAGG	1 cut(s)	27
XapI	RAATTY	3 cut(s)	190, 608, 1508
XbaI	TCTAGA	3 cut(s)	1085, 1297, 1567
XceI	RCATGY	3 cut(s)	101, 1853, 1891
XcmI	CCANNNNNNNNNTGG	1 cut(s)	226
XmaJI	CCTAGG	1 cut(s)	613
XmiI	GTMKAC	1 cut(s)	2261
XmnI	GAANNNNTTC	5 cut(s)	76, 194, 428, 474, 1461
XspI	CTAG	5 cut(s)	614, 1086, 1298, 1568, 1737
ZraI	GACGTC	1 cut(s)	2022
ZrmI	AGTACT	2 cut(s)	1008, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.