MD16G1110300.v1.1

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
7767300 .. 7771586
4287 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1110300.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGTTGAGACAGATACTAAACAAGCTTCCCCGGAAGTCTTCTAAGAATGCTGAAAATCGTGATGGAGCCCAGACATTGTATTCGAATCCTCCCACCAGTTCAAGAAGCAGTGATTTAGGGACCAGTAAGTCTGGGAATTTGACTACATCTTTCCCATCCGGAAATGCTGTTGCTGATGTGGTGAAAAGTTACAGCAACAAGAGTGCGAGGGGTGCAAATATGAAGCCGAATGGCTTCGCAATCTCTTCTTATGAAGCATTGCCTGGATTTAGAGATGTTCCAAACGCAGAGAAGCAGAGCTTATTCATTAAAAAGCTGAGTTTGTGCTGTGTTGTATTTGACTTCACGGACCCAACAAAGCACCTGAAAGAAAAGGAGATCAAGCGGCAGACACTGTTAGAGCTGGTGGATTATGTGACTAAACCAAACAGTAAATTTTCAGAAGCTCTTATGCAAGAACTCATAAACATGGTGTCTGCAAATATGTTTAGGGCGTTCACCCCACAGCCACGTGAGAATAAAGTTGCAGAAGGCTTTGATTTGGAAGAGGAGGAACCTTCAATGGATCCTGCGTGGCCTCATTTGCAAGTAGTGTATGAGTTATTGTTAAGGTTTGTCGCATCACCTGAGACAGATGCAAAATTAGCTAAAAGATTTGTTGATCACTCATTCATTCTCAAGTTGCTGGATCTTTTTGACTCTGAAGATCCTAGAGAAAGAGAGTATTTGAAAACAATACTGCACCGAGTTTATGGAAAATTTATGGTGCATCGCCCATTCATTAGGAAGGCTATTAACAACATCTTTTATCGTTTCATCTTTGAGACCGAGAAGCATAATGGGATTTCTGAACTCCTAGAAATTTTGGGCAGTATTATAAATGGGTTTGCTCTACCACTGAAAGAAGAACATAAATTGTTCCTCGTTCGGGCTTTAATTCCCCTGCATAAGCCAAAATGCTTAGCTATGTACCATCAGCAGTTATCTTACTGCATTATGCAATTTGTAGAGAAAGATTGCAAGCTTGCTGATACTGTCGTAAGGGGTTTACTGAAGTACTGGCCTATCACTAATAGTTCAAAGGAAGTATTGTTCCTAAGTGAGTTGGAAGAAGTGTTGGAAGCAACTCAGCCATCTGAGTTCCAGCGGTGCATGGTTCCCCTATTTCGCCAGATTGCTCATTGTTTGAACAGTTCTCACTTTCAGGTGGCAGAGAGAGCTTTATTTTTGTGGAACAACGATCACATTGAGAACTTAATCAGACAGAATCGTAAAGTTATACTGCCCATTATCTTACCTGCATTGGAGAAAAATGCTAGAAACCATTGGAACCAGGCTGTTCATAGCTTGACCCTAAATGTCCGAAAAATTTTCAATGAGCTTGATCCCGAGCTGTTCAAGGAATGCTTACTCCAGTTCCAGGAAGACGAGTCAAAGGATGGCGAGGTTACAGCACGACGTGAAGCCACATGGAAACGCTTGGAAGAAGTAGCTGCAAAGAAATCTGCGAGCAACGAAGCTGTGCTTGTTTTTGGCAAAGCACCTCCGCGCACTACTTCACTTTAG

Protein Analysis

522

Amino Acids

59.83

Weight (kDa)

8.69

Isoelectric Point (pI)

41.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 87 - 497 1.8e-190 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 878
AasI GACNNNNNNGTC 1 cut(s) 127
Acc36I ACCTGC 1 cut(s) 1306
AccII CGCG 1 cut(s) 1549
AccIII TCCGGA 1 cut(s) 158
AciI CCGC 3 cut(s) 385, 1147, 1547
AclWI GGATC 5 cut(s) 560, 573, 696, 701, 1379
AcsI RAATTY 5 cut(s) 136, 434, 758, 861, 1368
AcuI CTGAAG 2 cut(s) 723, 1073
AcvI CACGTG 1 cut(s) 512
AdeI CACNNNGTG 1 cut(s) 1460
AfaI GTAC 2 cut(s) 971, 1058
AfiI CCNNNNNNNGG 2 cut(s) 928, 1420
AgsI TTSAA 7 cut(s) 102, 561, 730, 1080, 1189, 1375, 1399
AjiI CACGTC 1 cut(s) 1460
AjnI CCWGG 3 cut(s) 262, 1332, 1419
AloI GAACNNNNNNTCC 2 cut(s) 1076, 1108
Alw26I GTCTC 2 cut(s) 623, 818
AlwI GGATC 5 cut(s) 560, 573, 696, 701, 1379
AlwNI CAGNNNCTG 1 cut(s) 394
Ama87I CYCGRG 1 cut(s) 1388
Aor13HI TCCGGA 1 cut(s) 158
AoxI GGCC 2 cut(s) 575, 1061
ApeKI GCWGC 1 cut(s) 1493
ApoI RAATTY 5 cut(s) 136, 434, 758, 861, 1368
ArsI GACNNNNNNTTYG 2 cut(s) 64, 96
Asp700I GAANNNNTTC 1 cut(s) 233
AspLEI GCGC 1 cut(s) 1551
AspS9I GGNCC 2 cut(s) 120, 349
AsuC2I CCSGG 1 cut(s) 31
AsuHPI GGTGA 3 cut(s) 193, 490, 615
AsuII TTCGAA 1 cut(s) 83
AvaI CYCGRG 1 cut(s) 1388
AvaII GGWCC 2 cut(s) 120, 349
BaeI ACNNNNGTAYC 2 cut(s) 1023, 1056
BamHI GGATCC 1 cut(s) 565
BanII GRGCYC 1 cut(s) 70
BbrPI CACGTG 1 cut(s) 512
BbsI GAAGAC 2 cut(s) 30, 1431
BbvI GCAGC 1 cut(s) 1480
BccI CCATC 5 cut(s) 56, 163, 981, 1141, 1433
BciT130I CCWGG 3 cut(s) 264, 1334, 1421
BclI TGATCA 1 cut(s) 661
BcnI CCSGG 1 cut(s) 31
BcoDI GTCTC 2 cut(s) 623, 818
BfaI CTAG 3 cut(s) 711, 857, 1317
BfuAI ACCTGC 1 cut(s) 1306
BisI GCNGC 2 cut(s) 386, 1494
BlpI GCTNAGC 1 cut(s) 961
BlsI GCNGC 2 cut(s) 387, 1495
BmcAI AGTACT 1 cut(s) 1058
Bme1390I CCNGG 4 cut(s) 31, 264, 1334, 1421
Bme18I GGWCC 2 cut(s) 120, 349
BmeT110I CYCGRG 1 cut(s) 1388
BmgBI CACGTC 1 cut(s) 1460
BmgT120I GGNCC 2 cut(s) 120, 349
BmiI GGNNCC 7 cut(s) 67, 121, 351, 555, 567, 1158, 1331
BmrFI CCNGG 4 cut(s) 31, 264, 1334, 1421
BmsI GCATC 3 cut(s) 625, 629, 778
BpiI GAAGAC 2 cut(s) 30, 1431
BpmI CTGGAG 1 cut(s) 1397
Bpu1102I GCTNAGC 1 cut(s) 961
Bpu14I TTCGAA 1 cut(s) 83
BpuEI CTTGAG 1 cut(s) 662
BpuMI CCSGG 1 cut(s) 31
BsaAI YACGTR 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 818
BsaJI CCNNGG 1 cut(s) 29
BsaWI WCCGGW 1 cut(s) 158
Bsc4I CCNNNNNNNGG 2 cut(s) 928, 1420
Bse1I ACTGG 4 cut(s) 96, 123, 1064, 1414
Bse3DI GCAATG 1 cut(s) 257
BseAI TCCGGA 1 cut(s) 158
BseBI CCWGG 3 cut(s) 264, 1334, 1421
BseDI CCNNGG 1 cut(s) 29
BseGI GGATG 2 cut(s) 155, 1444
BseLI CCNNNNNNNGG 2 cut(s) 928, 1420
BseMI GCAATG 1 cut(s) 257
BseMII CTCAG 4 cut(s) 308, 618, 1128, 1142
BseNI ACTGG 4 cut(s) 96, 123, 1064, 1414
BseRI GAGGAG 1 cut(s) 563
BseXI GCAGC 1 cut(s) 1480
BsgI GTGCAG 1 cut(s) 725
Bsh1236I CGCG 1 cut(s) 1549
BshFI GGCC 2 cut(s) 577, 1063
BsiHKCI CYCGRG 1 cut(s) 1388
BsiSI CCGG 2 cut(s) 31, 159
BslFI GGGAC 1 cut(s) 133
BslI CCNNNNNNNGG 2 cut(s) 928, 1420
BsmAI GTCTC 2 cut(s) 623, 818
BsmFI GGGAC 1 cut(s) 133
BsmI GAATGC 2 cut(s) 52, 1409
BsnI GGCC 2 cut(s) 577, 1063
Bso31I GGTCTC 1 cut(s) 818
BsoBI CYCGRG 1 cut(s) 1388
Bsp119I TTCGAA 1 cut(s) 83
Bsp1286I GDGCHC 1 cut(s) 70
Bsp13I TCCGGA 1 cut(s) 158
Bsp143I GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
Bsp1720I GCTNAGC 1 cut(s) 961
BspACI CCGC 3 cut(s) 385, 1147, 1547
BspANI GGCC 2 cut(s) 577, 1063
BspCNI CTCAG 4 cut(s) 309, 619, 1129, 1141
BspEI TCCGGA 1 cut(s) 158
BspFNI CGCG 1 cut(s) 1549
BspLI GGNNCC 7 cut(s) 67, 121, 351, 555, 567, 1158, 1331
BspMI ACCTGC 1 cut(s) 1306
BspPI GGATC 5 cut(s) 560, 573, 696, 701, 1379
BspT104I TTCGAA 1 cut(s) 83
BspTNI GGTCTC 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 257
BsrI ACTGG 4 cut(s) 96, 123, 1064, 1414
BssECI CCNNGG 1 cut(s) 29
BssMI GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
Bst2UI CCWGG 3 cut(s) 264, 1334, 1421
Bst4CI ACNGT 4 cut(s) 396, 431, 1036, 1193
Bst6I CTCTTC 2 cut(s) 250, 540
BstBAI YACGTR 1 cut(s) 512
BstBI TTCGAA 1 cut(s) 83
BstC8I GCNNGC 3 cut(s) 1022, 1026, 1510
BstDEI CTNAG 7 cut(s) 42, 317, 627, 961, 1097, 1128, 1137
BstF5I GGATG 2 cut(s) 155, 1444
BstFNI CGCG 1 cut(s) 1549
BstHHI GCGC 1 cut(s) 1551
BstKTI GATC 7 cut(s) 381, 568, 664, 691, 709, 1243, 1387
BstMAI GTCTC 2 cut(s) 623, 818
BstMBI GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
BstMWI GCNNNNNNNGC 4 cut(s) 212, 583, 644, 1217
BstNI CCWGG 3 cut(s) 264, 1334, 1421
BstSCI CCNGG 4 cut(s) 29, 262, 1332, 1419
BstUI CGCG 1 cut(s) 1549
BstV1I GCAGC 1 cut(s) 1480
BstV2I GAAGAC 2 cut(s) 30, 1431
BstX2I RGATCY 3 cut(s) 565, 688, 706
BstYI RGATCY 3 cut(s) 565, 688, 706
BsuRI GGCC 2 cut(s) 577, 1063
BtgZI GCGATG 1 cut(s) 755
BtrI CACGTC 1 cut(s) 1460
BtsCI GGATG 2 cut(s) 155, 1444
BtsI GCAGTG 1 cut(s) 115
BtsIMutI CAGTG 3 cut(s) 115, 392, 896
BveI ACCTGC 1 cut(s) 1306
Cac8I GCNNGC 3 cut(s) 1022, 1026, 1510
CaiI CAGNNNCTG 1 cut(s) 394
CfoI GCGC 1 cut(s) 1551
Cfr13I GGNCC 2 cut(s) 120, 349
Csp6I GTAC 2 cut(s) 970, 1057
CviAII CATG 3 cut(s) 469, 1153, 1470
CviQI GTAC 2 cut(s) 970, 1057
DdeI CTNAG 7 cut(s) 42, 317, 627, 961, 1097, 1128, 1137
DpnI GATC 7 cut(s) 380, 567, 663, 690, 708, 1242, 1386
DpnII GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
DraIII CACNNNGTG 1 cut(s) 1460
DrdI GACNNNNNNGTC 1 cut(s) 127
DseDI GACNNNNNNGTC 1 cut(s) 127
Eam1104I CTCTTC 2 cut(s) 250, 540
EarI CTCTTC 2 cut(s) 250, 540
Eco24I GRGCYC 1 cut(s) 70
Eco31I GGTCTC 1 cut(s) 818
Eco47I GGWCC 2 cut(s) 120, 349
Eco57I CTGAAG 2 cut(s) 723, 1073
Eco72I CACGTG 1 cut(s) 512
Eco88I CYCGRG 1 cut(s) 1388
EcoRII CCWGG 3 cut(s) 262, 1332, 1419
EcoT38I GRGCYC 1 cut(s) 70
FaeI CATG 3 cut(s) 472, 1156, 1473
FalI AAGNNNNNCTT 6 cut(s) 284, 316, 1391, 1423, 1509, 1541
FaqI GGGAC 1 cut(s) 133
FatI CATG 3 cut(s) 468, 1152, 1469
FbaI TGATCA 1 cut(s) 661
Fnu4HI GCNGC 2 cut(s) 386, 1494
FokI GGATG 2 cut(s) 142, 1451
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 2 cut(s) 386, 1494
FspBI CTAG 3 cut(s) 711, 857, 1317
GlaI GCGC 1 cut(s) 1550
GluI GCNGC 2 cut(s) 386, 1494
GsuI CTGGAG 1 cut(s) 1397
HaeIII GGCC 2 cut(s) 577, 1063
HapII CCGG 2 cut(s) 31, 159
HhaI GCGC 1 cut(s) 1551
Hin1II CATG 3 cut(s) 472, 1156, 1473
Hin6I GCGC 1 cut(s) 1549
HinP1I GCGC 1 cut(s) 1549
HindIII AAGCTT 2 cut(s) 23, 1022
HinfI GANTC 4 cut(s) 85, 698, 1267, 1430
HpaII CCGG 2 cut(s) 31, 159
HphI GGTGA 3 cut(s) 193, 490, 615
Hpy166II GTNNAC 2 cut(s) 498, 1049
Hpy188I TCNGA 6 cut(s) 442, 703, 850, 1138, 1262, 1364
Hpy188III TCNNGA 4 cut(s) 59, 102, 159, 1388
Hpy8I GTNNAC 2 cut(s) 498, 1049
Hpy99I CGWCG 1 cut(s) 1461
HpyAV CCTTC 3 cut(s) 524, 567, 781
HpyCH4III ACNGT 4 cut(s) 396, 431, 1036, 1193
HpyCH4IV ACGT 2 cut(s) 511, 1459
HpyF10VI GCNNNNNNNGC 4 cut(s) 212, 583, 644, 1217
HpyF3I CTNAG 7 cut(s) 42, 317, 627, 961, 1097, 1128, 1137
HpySE526I ACGT 2 cut(s) 511, 1459
Hsp92II CATG 3 cut(s) 472, 1156, 1473
HspAI GCGC 1 cut(s) 1549
Kpn2I TCCGGA 1 cut(s) 158
Ksp22I TGATCA 1 cut(s) 661
Kzo9I GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
LmnI GCTCC 1 cut(s) 65
Lsp1109I GCAGC 1 cut(s) 1480
LweI GCATC 3 cut(s) 625, 629, 778
MaeI CTAG 3 cut(s) 711, 857, 1317
MaeII ACGT 2 cut(s) 511, 1459
MaeIII GTNAC 3 cut(s) 188, 415, 1447
MalI GATC 7 cut(s) 380, 567, 663, 690, 708, 1242, 1386
MboI GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
MboII GAAGA 8 cut(s) 30, 237, 557, 716, 917, 1121, 1436, 1496
MflI RGATCY 3 cut(s) 565, 688, 706
MhlI GDGCHC 1 cut(s) 70
MluCI AATT 9 cut(s) 136, 434, 641, 758, 861, 914, 936, 1001, 1368
MlyI GAGTC 2 cut(s) 692, 1439
MmeI TCCRAC 2 cut(s) 1086, 1098
MnlI CCTC 8 cut(s) 99, 201, 541, 544, 588, 932, 1438, 1554
MroI TCCGGA 1 cut(s) 158
MroXI GAANNNNTTC 1 cut(s) 233
MseI TTAA 5 cut(s) 309, 608, 795, 935, 1256
MslI CAYNNNNRTG 1 cut(s) 467
MspA1I CMGCKG 1 cut(s) 1147
MspI CCGG 2 cut(s) 31, 159
MspR9I CCNGG 4 cut(s) 31, 264, 1334, 1421
Mva1269I GAATGC 2 cut(s) 52, 1409
MvaI CCWGG 3 cut(s) 264, 1334, 1421
MvnI CGCG 1 cut(s) 1549
MwoI GCNNNNNNNGC 4 cut(s) 212, 583, 644, 1217
NciI CCSGG 1 cut(s) 31
NdeII GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
NlaIII CATG 3 cut(s) 472, 1156, 1473
NlaIV GGNNCC 7 cut(s) 67, 121, 351, 555, 567, 1158, 1331
NmuCI GTSAC 1 cut(s) 415
NspV TTCGAA 1 cut(s) 83
PctI GAATGC 2 cut(s) 52, 1409
PdmI GAANNNNTTC 1 cut(s) 233
PfeI GAWTC 2 cut(s) 85, 1267
PfoI TCCNGGA 1 cut(s) 1419
PkrI GCNGC 2 cut(s) 387, 1495
PleI GAGTC 2 cut(s) 692, 1438
PmaCI CACGTG 1 cut(s) 512
PmlI CACGTG 1 cut(s) 512
PpsI GAGTC 2 cut(s) 692, 1438
Ppu21I YACGTR 1 cut(s) 512
PsiI TTATAA 1 cut(s) 878
Psp6I CCWGG 3 cut(s) 262, 1332, 1419
PspCI CACGTG 1 cut(s) 512
PspGI CCWGG 3 cut(s) 262, 1332, 1419
PspN4I GGNNCC 7 cut(s) 67, 121, 351, 555, 567, 1158, 1331
PspPI GGNCC 2 cut(s) 120, 349
PstNI CAGNNNCTG 1 cut(s) 394
PsuI RGATCY 3 cut(s) 565, 688, 706
RsaI GTAC 2 cut(s) 971, 1058
RsaNI GTAC 2 cut(s) 970, 1057
RseI CAYNNNNRTG 1 cut(s) 467
SaqAI TTAA 5 cut(s) 309, 608, 795, 935, 1256
SatI GCNGC 2 cut(s) 386, 1494
Sau3AI GATC 7 cut(s) 378, 565, 661, 688, 706, 1240, 1384
Sau96I GGNCC 2 cut(s) 120, 349
ScaI AGTACT 1 cut(s) 1058
SchI GAGTC 2 cut(s) 692, 1439
ScrFI CCNGG 4 cut(s) 31, 264, 1334, 1421
SduI GDGCHC 1 cut(s) 70
SfaNI GCATC 3 cut(s) 625, 629, 778
SfuI TTCGAA 1 cut(s) 83
SinI GGWCC 2 cut(s) 120, 349
SmiMI CAYNNNNRTG 1 cut(s) 467
SmlI CTYRAG 1 cut(s) 677
SmoI CTYRAG 1 cut(s) 677
Sse9I AATT 9 cut(s) 136, 434, 641, 758, 861, 914, 936, 1001, 1368
SsiI CCGC 3 cut(s) 385, 1147, 1547
SspMI CTAG 3 cut(s) 711, 857, 1317
StyD4I CCNGG 4 cut(s) 29, 262, 1332, 1419
TaaI ACNGT 4 cut(s) 396, 431, 1036, 1193
TaiI ACGT 2 cut(s) 514, 1462
TaqI TCGA 1 cut(s) 83
TaqII GACCGA 1 cut(s) 842
TasI AATT 9 cut(s) 136, 434, 641, 758, 861, 914, 936, 1001, 1368
TatI WGTACW 1 cut(s) 1056
TauI GCSGC 1 cut(s) 388
TfiI GAWTC 2 cut(s) 85, 1267
Tru1I TTAA 5 cut(s) 309, 608, 795, 935, 1256
Tru9I TTAA 5 cut(s) 309, 608, 795, 935, 1256
TscAI CASTG 3 cut(s) 115, 399, 903
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 1 cut(s) 1493
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 7 cut(s) 236, 267, 295, 661, 769, 805, 1331
TspGWI ACGGA 1 cut(s) 362
TspRI CASTG 3 cut(s) 115, 399, 903
VpaK11BI GGWCC 2 cut(s) 120, 349
XapI RAATTY 5 cut(s) 136, 434, 758, 861, 1368
XmnI GAANNNNTTC 1 cut(s) 233
XspI CTAG 3 cut(s) 711, 857, 1317
ZrmI AGTACT 1 cut(s) 1058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.