Rw2G053750

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
81445943 .. 81449910
3968 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G053750.1

Sequence Viewer

Length: 1569 bp
ATGATCAAACAGATACTTAATAGACTTCCTAGGAAGCCCAAGTCAGCTGAACATCGTGAAGGAGGAGCCTCGAACACTTCTTCAAATGCTTCAACCAGTTCAAGAAGCGGTTCAACGAGTAGTAAATTTGCAAACTCGAGTACTACGTCTCTTTCAGGCCCTAATTCTACTCCTAACTATGGAGTAAATCATGGAAGCAAGCTTAACCAGGATGTGAATGCAAAGGTTAATGGGAATTCATTTGCTTCATTGGAGGCATTGCCTAGCTTCAAAGATGTTCCGAATTCGGAGAAGCAGAACTTGTGCATAAAAAAGTTGAACTTGTGTTGTTATGTGTTTGACTTCACTGACCCAACAAAAAACCTCAAGGAAAAGGACATCAAGCGACAGACGTTGGTAGAGCTTGTGGATTACATTGCTTCTGCCAATGGGAAGTTCTCAGAAAGTGTCATTCAAGAACTTGTAAAGATGGTGTCCATAAACTTATTTAGAACATTCAGTTCTCCACCCCATGAAAATAAAGCTCTAGAGGCCTTTGACTTAGAAGAGGACGAGCCCTCAATGGACCCCGCATGGCCGCACTTGCAAGTTGTGTATGAATTGTTCTTGAGGTTTGTGGCATCACCTGAGACAGATGCAAAGTTGGCTAAGAGGTACGTGGATCACTCGTTCGTTCTCAAGTTATTAGGTCTTTTTGATTCGGATGACCACAGAGAGAGAGACTACTTGAAAACTGTTCTGCACCGAATCTATGGGAAATTTATGGTGCACCGCCCATTCATCAGGAAAGCAATCAACCACATCTTCTACCATTTTATTTTTGAAACAGAAAAGCATAATGGGATTGCTGAGCTGTTAGAGATTTTGGGAAGTATAATCAACGGTTTTGCTCTGCCATTGAAAGAAGAGCACAAACTCTTTCTGGTTCGAGTGCTTATTCCACTTCACAAGCCAAAATGTGTATCCTTGTACCATCAGCAGCTATCTTATTGCATTACCCAATTTGTGGAGAAAGACTGTAAACTTGCTGATACAATAATCCGTGGGTTACTAAAATATTGGCCTATTACAAATAGTTCGAAAGAGGTCATGTTCTTAGGTGAGCTGGAAGAAGTTTTAGAAGCTACTCAGCCTGGAGAGTTCCAGCGCTGTATGGTACCATTGTTTCGCCAAGTTGGCCGTTGCTTGAGCAGTTCGCATTTTCAGGTGGCGGAAAGAGCTCTGTTCTTATGGAATAATGATCACATTTCAAACTTAATCAAACAGAATCGCCATGTTTTACTGCCCATCATATTCCCTTCGTTGGAGAGAAATGCAAGAAATCACTGGAACCAGGCAGTTCAGAGCCTAACACTAAATGTCCGCAAGATATTCTCCGATATTGACCCTGAGCTTTTTGAGGAATGCTTGCTCAAATTCCAGGAAGATGAAGCACAAGAGAAGGAAATGAGTTTGAAACGTGAATTGACTTGGAAACGTTTGGAAGAGATTGCTGCAAAGAAAGCTTCTGCAAGTAATGAAGCGGTGCTTGTGTCCCCAAGAAAAGCCATGGGCAAGCCTTCTGGCTAG

Protein Analysis

522

Amino Acids

59.58

Weight (kDa)

8.54

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 87 - 498 2.2e-191 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1156
AccB1I GGYRCC 1 cut(s) 1156
AccB7I CCANNNNNTGG 1 cut(s) 1006
AciI CCGC 7 cut(s) 108, 570, 578, 772, 1211, 1363, 1523
AclI AACGTT 1 cut(s) 1477
AclWI GGATC 1 cut(s) 669
AcoI YGGCCR 2 cut(s) 575, 1177
AcsI RAATTY 5 cut(s) 125, 235, 283, 758, 1415
AfaI GTAC 4 cut(s) 142, 656, 971, 1158
AfeI AGCGCT 1 cut(s) 1148
AfiI CCNNNNNNNGG 3 cut(s) 179, 1006, 1303
AjnI CCWGG 4 cut(s) 207, 1132, 1332, 1419
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AloI GAACNNNNNNTCC 2 cut(s) 653, 685
Alw21I GWGCWC 3 cut(s) 771, 912, 1222
Alw26I GTCTC 3 cut(s) 153, 623, 714
Alw44I GTGCAC 1 cut(s) 767
AlwI GGATC 1 cut(s) 669
Ama87I CYCGRG 1 cut(s) 136
Aor51HI AGCGCT 1 cut(s) 1148
AoxI GGCC 5 cut(s) 157, 531, 575, 1061, 1177
ApaLI GTGCAC 1 cut(s) 767
ApeKI GCWGC 2 cut(s) 979, 1493
ApoI RAATTY 5 cut(s) 125, 235, 283, 758, 1415
Asp700I GAANNNNTTC 1 cut(s) 109
Asp718I GGTACC 1 cut(s) 1156
AspA2I CCTAGG 1 cut(s) 29
AspLEI GCGC 1 cut(s) 1149
AspS9I GGNCC 2 cut(s) 158, 565
AsuHPI GGTGA 2 cut(s) 615, 1112
AsuII TTCGAA 1 cut(s) 1079
AvaI CYCGRG 1 cut(s) 136
AvaII GGWCC 1 cut(s) 565
AvrII CCTAGG 1 cut(s) 29
BaeGI GKGCMC 1 cut(s) 771
BaeI ACNNNNGTAYC 2 cut(s) 1148, 1181
BanI GGYRCC 1 cut(s) 1156
BanII GRGCYC 2 cut(s) 558, 1222
Bbv12I GWGCWC 3 cut(s) 771, 912, 1222
BbvI GCAGC 2 cut(s) 991, 1480
BccI CCATC 3 cut(s) 463, 981, 1295
BceAI ACGGC 1 cut(s) 1164
BciT130I CCWGG 4 cut(s) 209, 1134, 1334, 1421
BciVI GTATCC 1 cut(s) 973
BclI TGATCA 2 cut(s) 3, 1240
BcoDI GTCTC 3 cut(s) 153, 623, 714
BfaI CTAG 4 cut(s) 30, 264, 527, 1567
BfoI RGCGCY 1 cut(s) 1150
BfuI GTATCC 1 cut(s) 973
BglI GCCNNNNNGGC 1 cut(s) 1176
BisI GCNGC 3 cut(s) 578, 980, 1494
BlnI CCTAGG 1 cut(s) 29
BlpI GCTNAGC 1 cut(s) 849
BlsI GCNGC 3 cut(s) 579, 981, 1495
BmcAI AGTACT 1 cut(s) 142
Bme1390I CCNGG 4 cut(s) 209, 1134, 1334, 1421
Bme18I GGWCC 1 cut(s) 565
BmeT110I CYCGRG 1 cut(s) 136
BmgT120I GGNCC 2 cut(s) 158, 565
BmiI GGNNCC 4 cut(s) 67, 567, 1158, 1331
BmrFI CCNGG 4 cut(s) 209, 1134, 1334, 1421
BmsI GCATC 2 cut(s) 625, 629
BpmI CTGGAG 1 cut(s) 1155
Bpu10I CCTNAGC 1 cut(s) 1389
Bpu1102I GCTNAGC 1 cut(s) 849
Bpu14I TTCGAA 1 cut(s) 1079
BpuEI CTTGAG 4 cut(s) 350, 628, 662, 1207
BsaAI YACGTR 1 cut(s) 658
BsaJI CCNNGG 3 cut(s) 29, 1042, 1548
Bsc4I CCNNNNNNNGG 3 cut(s) 179, 1006, 1303
Bse1I ACTGG 2 cut(s) 96, 1331
Bse3DI GCAATG 2 cut(s) 257, 414
BseBI CCWGG 4 cut(s) 209, 1134, 1334, 1421
BseDI CCNNGG 3 cut(s) 29, 1042, 1548
BseGI GGATG 2 cut(s) 217, 709
BseLI CCNNNNNNNGG 3 cut(s) 179, 1006, 1303
BseMI GCAATG 2 cut(s) 257, 414
BseMII CTCAG 5 cut(s) 453, 618, 840, 1142, 1380
BseNI ACTGG 2 cut(s) 96, 1331
BseRI GAGGAG 1 cut(s) 78
BseSI GKGCMC 1 cut(s) 771
BseXI GCAGC 2 cut(s) 991, 1480
BsgI GTGCAG 1 cut(s) 725
BshFI GGCC 5 cut(s) 159, 533, 577, 1063, 1179
BshNI GGYRCC 1 cut(s) 1156
BsiHKAI GWGCWC 3 cut(s) 771, 912, 1222
BsiHKCI CYCGRG 1 cut(s) 136
BslFI GGGAC 1 cut(s) 1519
BslI CCNNNNNNNGG 3 cut(s) 179, 1006, 1303
BsmAI GTCTC 3 cut(s) 153, 623, 714
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 1519
BsmI GAATGC 2 cut(s) 223, 1409
BsnI GGCC 5 cut(s) 159, 533, 577, 1063, 1179
BsoBI CYCGRG 1 cut(s) 136
Bsp119I TTCGAA 1 cut(s) 1079
Bsp1286I GDGCHC 4 cut(s) 558, 771, 912, 1222
Bsp143I GATC 3 cut(s) 3, 661, 1240
Bsp1720I GCTNAGC 1 cut(s) 849
Bsp19I CCATGG 1 cut(s) 1548
BspACI CCGC 7 cut(s) 108, 570, 578, 772, 1211, 1363, 1523
BspANI GGCC 5 cut(s) 159, 533, 577, 1063, 1179
BspCNI CTCAG 5 cut(s) 452, 619, 841, 1141, 1381
BspLI GGNNCC 4 cut(s) 67, 567, 1158, 1331
BspPI GGATC 1 cut(s) 669
BspQI GCTCTTC 1 cut(s) 900
BspT104I TTCGAA 1 cut(s) 1079
BspT107I GGYRCC 1 cut(s) 1156
BsrDI GCAATG 2 cut(s) 257, 414
BsrI ACTGG 2 cut(s) 96, 1331
BssECI CCNNGG 3 cut(s) 29, 1042, 1548
BssMI GATC 3 cut(s) 3, 661, 1240
BssT1I CCWWGG 2 cut(s) 29, 1548
Bst2UI CCWGG 4 cut(s) 209, 1134, 1334, 1421
Bst4CI ACNGT 3 cut(s) 736, 884, 1019
Bst6I CTCTTC 3 cut(s) 540, 900, 1479
BstBAI YACGTR 1 cut(s) 658
BstBI TTCGAA 1 cut(s) 1079
BstC8I GCNNGC 3 cut(s) 200, 1409, 1556
BstDEI CTNAG 8 cut(s) 439, 541, 627, 648, 849, 1096, 1128, 1389
BstDSI CCRYGG 2 cut(s) 1042, 1548
BstF5I GGATG 2 cut(s) 217, 709
BstH2I RGCGCY 1 cut(s) 1150
BstHHI GCGC 1 cut(s) 1149
BstKTI GATC 3 cut(s) 6, 664, 1243
BstMAI GTCTC 3 cut(s) 153, 623, 714
BstMBI GATC 3 cut(s) 3, 661, 1240
BstMWI GCNNNNNNNGC 6 cut(s) 530, 583, 644, 1176, 1217, 1502
BstNI CCWGG 4 cut(s) 209, 1134, 1334, 1421
BstSCI CCNGG 4 cut(s) 207, 1132, 1332, 1419
BstSLI GKGCMC 1 cut(s) 771
BstV1I GCAGC 2 cut(s) 991, 1480
BsuI GTATCC 1 cut(s) 973
BsuRI GGCC 5 cut(s) 159, 533, 577, 1063, 1179
BtgI CCRYGG 2 cut(s) 1042, 1548
BtsCI GGATG 2 cut(s) 217, 709
BtsIMutI CAGTG 2 cut(s) 345, 1324
Cac8I GCNNGC 3 cut(s) 200, 1409, 1556
CfoI GCGC 1 cut(s) 1149
Cfr13I GGNCC 2 cut(s) 158, 565
Csp6I GTAC 4 cut(s) 141, 655, 970, 1157
CviAII CATG 6 cut(s) 191, 512, 573, 1090, 1274, 1549
CviQI GTAC 4 cut(s) 141, 655, 970, 1157
DdeI CTNAG 8 cut(s) 439, 541, 627, 648, 849, 1096, 1128, 1389
DpnI GATC 3 cut(s) 5, 663, 1242
DpnII GATC 3 cut(s) 3, 661, 1240
EaeI YGGCCR 2 cut(s) 575, 1177
Eam1104I CTCTTC 3 cut(s) 540, 900, 1479
EarI CTCTTC 3 cut(s) 540, 900, 1479
EciI GGCGGA 1 cut(s) 1226
Ecl136II GAGCTC 1 cut(s) 1220
Eco130I CCWWGG 2 cut(s) 29, 1548
Eco147I AGGCCT 1 cut(s) 533
Eco24I GRGCYC 2 cut(s) 558, 1222
Eco47I GGWCC 1 cut(s) 565
Eco47III AGCGCT 1 cut(s) 1148
Eco53kI GAGCTC 1 cut(s) 1220
Eco88I CYCGRG 1 cut(s) 136
EcoICRI GAGCTC 1 cut(s) 1220
EcoO109I RGGNCCY 1 cut(s) 158
EcoRI GAATTC 2 cut(s) 235, 283
EcoRII CCWGG 4 cut(s) 207, 1132, 1332, 1419
EcoT14I CCWWGG 2 cut(s) 29, 1548
EcoT38I GRGCYC 2 cut(s) 558, 1222
ErhI CCWWGG 2 cut(s) 29, 1548
Esp3I CGTCTC 1 cut(s) 153
FaeI CATG 6 cut(s) 194, 515, 576, 1093, 1277, 1552
FalI AAGNNNNNCTT 6 cut(s) 284, 316, 305, 337, 1512, 1544
FaqI GGGAC 1 cut(s) 1519
FatI CATG 6 cut(s) 190, 511, 572, 1089, 1273, 1548
FauI CCCGC 1 cut(s) 577
FbaI TGATCA 2 cut(s) 3, 1240
Fnu4HI GCNGC 3 cut(s) 578, 980, 1494
FokI GGATG 2 cut(s) 224, 716
FriOI GRGCYC 2 cut(s) 558, 1222
Fsp4HI GCNGC 3 cut(s) 578, 980, 1494
FspBI CTAG 4 cut(s) 30, 264, 527, 1567
GlaI GCGC 1 cut(s) 1148
GluI GCNGC 3 cut(s) 578, 980, 1494
GsuI CTGGAG 1 cut(s) 1155
HaeII RGCGCY 1 cut(s) 1150
HaeIII GGCC 5 cut(s) 159, 533, 577, 1063, 1179
HhaI GCGC 1 cut(s) 1149
Hin1II CATG 6 cut(s) 194, 515, 576, 1093, 1277, 1552
Hin6I GCGC 1 cut(s) 1147
HinP1I GCGC 1 cut(s) 1147
HindIII AAGCTT 2 cut(s) 200, 1503
HinfI GANTC 3 cut(s) 698, 747, 1267
HphI GGTGA 2 cut(s) 615, 1112
Hpy166II GTNNAC 2 cut(s) 769, 1022
Hpy188I TCNGA 6 cut(s) 282, 289, 442, 703, 1344, 1378
Hpy188III TCNNGA 6 cut(s) 56, 102, 455, 527, 607, 784
Hpy8I GTNNAC 2 cut(s) 769, 1022
HpyAV CCTTC 4 cut(s) 53, 1308, 1435, 1569
HpyCH4III ACNGT 3 cut(s) 736, 884, 1019
HpyCH4IV ACGT 5 cut(s) 146, 392, 657, 1459, 1477
HpyF10VI GCNNNNNNNGC 6 cut(s) 530, 583, 644, 1176, 1217, 1502
HpyF3I CTNAG 8 cut(s) 439, 541, 627, 648, 849, 1096, 1128, 1389
HpySE526I ACGT 5 cut(s) 146, 392, 657, 1459, 1477
Hsp92II CATG 6 cut(s) 194, 515, 576, 1093, 1277, 1552
HspAI GCGC 1 cut(s) 1147
KpnI GGTACC 1 cut(s) 1160
Ksp22I TGATCA 2 cut(s) 3, 1240
Kzo9I GATC 3 cut(s) 3, 661, 1240
LguI GCTCTTC 1 cut(s) 900
LmnI GCTCC 1 cut(s) 65
Lsp1109I GCAGC 2 cut(s) 991, 1480
LweI GCATC 2 cut(s) 625, 629
MaeI CTAG 4 cut(s) 30, 264, 527, 1567
MaeII ACGT 5 cut(s) 146, 392, 657, 1459, 1477
MaeIII GTNAC 1 cut(s) 1047
MalI GATC 3 cut(s) 5, 663, 1242
MboI GATC 3 cut(s) 3, 661, 1240
MboII GAAGA 7 cut(s) 72, 557, 796, 917, 1121, 1436, 1496
MhlI GDGCHC 4 cut(s) 558, 771, 912, 1222
MluCI AATT 9 cut(s) 125, 163, 235, 283, 599, 758, 1001, 1415, 1463
MmeI TCCRAC 1 cut(s) 1284
MroXI GAANNNNTTC 1 cut(s) 109
MseI TTAA 4 cut(s) 18, 204, 228, 1256
MspA1I CMGCKG 1 cut(s) 47
MspR9I CCNGG 4 cut(s) 209, 1134, 1334, 1421
Mva1269I GAATGC 2 cut(s) 223, 1409
MvaI CCWGG 4 cut(s) 209, 1134, 1334, 1421
MwoI GCNNNNNNNGC 6 cut(s) 530, 583, 644, 1176, 1217, 1502
NcoI CCATGG 1 cut(s) 1548
NdeII GATC 3 cut(s) 3, 661, 1240
NlaIII CATG 6 cut(s) 194, 515, 576, 1093, 1277, 1552
NlaIV GGNNCC 4 cut(s) 67, 567, 1158, 1331
NspV TTCGAA 1 cut(s) 1079
PaeR7I CTCGAG 1 cut(s) 136
PceI AGGCCT 1 cut(s) 533
PciSI GCTCTTC 1 cut(s) 900
PcsI WCGNNNNNNNCGW 1 cut(s) 143
PctI GAATGC 2 cut(s) 223, 1409
PdmI GAANNNNTTC 1 cut(s) 109
PfeI GAWTC 3 cut(s) 698, 747, 1267
PflMI CCANNNNNTGG 1 cut(s) 1006
PfoI TCCNGGA 1 cut(s) 1419
PkrI GCNGC 3 cut(s) 579, 981, 1495
Ppu21I YACGTR 1 cut(s) 658
Psp124BI GAGCTC 1 cut(s) 1222
Psp1406I AACGTT 1 cut(s) 1477
Psp6I CCWGG 4 cut(s) 207, 1132, 1332, 1419
PspGI CCWGG 4 cut(s) 207, 1132, 1332, 1419
PspN4I GGNNCC 4 cut(s) 67, 567, 1158, 1331
PspPI GGNCC 2 cut(s) 158, 565
PspXI VCTCGAGB 1 cut(s) 136
PsrI GAACNNNNNNTAC 2 cut(s) 587, 619
PvuII CAGCTG 1 cut(s) 47
RsaI GTAC 4 cut(s) 142, 656, 971, 1158
RsaNI GTAC 4 cut(s) 141, 655, 970, 1157
SacI GAGCTC 1 cut(s) 1222
SapI GCTCTTC 1 cut(s) 900
SaqAI TTAA 4 cut(s) 18, 204, 228, 1256
SatI GCNGC 3 cut(s) 578, 980, 1494
Sau3AI GATC 3 cut(s) 3, 661, 1240
Sau96I GGNCC 2 cut(s) 158, 565
ScaI AGTACT 1 cut(s) 142
ScrFI CCNGG 4 cut(s) 209, 1134, 1334, 1421
SduI GDGCHC 4 cut(s) 558, 771, 912, 1222
SfaNI GCATC 2 cut(s) 625, 629
Sfr274I CTCGAG 1 cut(s) 136
SfuI TTCGAA 1 cut(s) 1079
SinI GGWCC 1 cut(s) 565
SlaI CTCGAG 1 cut(s) 136
SmlI CTYRAG 5 cut(s) 136, 365, 607, 677, 1186
SmoI CTYRAG 5 cut(s) 136, 365, 607, 677, 1186
Sse9I AATT 9 cut(s) 125, 163, 235, 283, 599, 758, 1001, 1415, 1463
SseBI AGGCCT 1 cut(s) 533
SsiI CCGC 7 cut(s) 108, 570, 578, 772, 1211, 1363, 1523
SspI AATATT 1 cut(s) 1058
SspMI CTAG 4 cut(s) 30, 264, 527, 1567
SstI GAGCTC 1 cut(s) 1222
StuI AGGCCT 1 cut(s) 533
StyD4I CCNGG 4 cut(s) 207, 1132, 1332, 1419
StyI CCWWGG 2 cut(s) 29, 1548
TaaI ACNGT 3 cut(s) 736, 884, 1019
TaiI ACGT 5 cut(s) 149, 395, 660, 1462, 1480
TaqI TCGA 4 cut(s) 71, 137, 928, 1079
TasI AATT 9 cut(s) 125, 163, 235, 283, 599, 758, 1001, 1415, 1463
TatI WGTACW 1 cut(s) 140
TauI GCSGC 1 cut(s) 580
TfiI GAWTC 3 cut(s) 698, 747, 1267
Tru1I TTAA 4 cut(s) 18, 204, 228, 1256
Tru9I TTAA 4 cut(s) 18, 204, 228, 1256
TscAI CASTG 2 cut(s) 352, 1331
TseI GCWGC 2 cut(s) 979, 1493
TspDTI ATGAA 7 cut(s) 228, 237, 528, 612, 769, 1443, 1533
TspGWI ACGGA 1 cut(s) 1031
TspRI CASTG 2 cut(s) 352, 1331
Van91I CCANNNNNTGG 1 cut(s) 1006
VneI GTGCAC 1 cut(s) 767
VpaK11BI GGWCC 1 cut(s) 565
XapI RAATTY 5 cut(s) 125, 235, 283, 758, 1415
XbaI TCTAGA 1 cut(s) 526
XhoI CTCGAG 1 cut(s) 136
XmaJI CCTAGG 1 cut(s) 29
XmnI GAANNNNTTC 1 cut(s) 109
XspI CTAG 4 cut(s) 30, 264, 527, 1567
ZrmI AGTACT 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.