pycom13g09610

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
6447250 .. 6449154
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g09610.1

Sequence Viewer

Length: 1524 bp
ATGATCAAGAATTTAATTGGTAAGCTTCCTAGGAAGCCGTCTAAGTCAGCCGAGAATCGTGAATTTGGGGGTTCTTCTGCCCCTGCATTGAATGCTTCCTCTATAGGTTCAAGAAGCGGTGATGTAGGGAATAGGCCAATTAATTCAAATAGCGTACCTCTTTCGGGCCTTGATTCTGATTCAAATTTAGGATATGGCCATGGAAGTAAGCTCCCTCAACTTGTCAACTCAAGTCTGAATTCTGTTACCACTTCTTATGAAGCGTTTCCAGCGTTTAGAGATGTACCAAACTCTGAGAAGCATAACTTGTTTGTGAAGAAGCTGAACTTATGTTGTGTGCTGTTTGACTTCACTGACCCAACGAAAAATCTGAGAGAAAAAGACATCAAGCGGCAGACGTTGCTAGAGCTTGTAGATTATGTTACTTCTGCAACTGGAAAGTTCACTGAAATCATAGTGCAAGAAGTTGTAAAGGTGGTGACTGTGAATTTGTTCAGGTCATTCTCTCCACAGCCCCGTGAGAATAAGGTTTTAGAAGGATTTGATGTGGAGGAGGAGGAGCCTTTGATGGACCCTGCATGGTCACACTTACAGATTGTGTACGAACTTTTTCTGAGGTTTGTTGCATCGCCCGAGACAGATGCAAAGGTCGCTAAGAAGTACATTGATCGATCTTTTGTTCTCAAATTATTGGATCTCTTTGATTCTGAGGATCCTAGGGAAAGGGAGTACTTAAAAACAATTCTGCATCGTGTCTATGGAAAGTTTATGGTGCATCGCCCATTCATTAGGAAGGCAATCAACAATATATTTTTCCAATTTATTTTTGAAACAGAAAAGCACAATGGGATTGCTGAGTTTTTAGAGGTTTTGGGCAGTATAATCAATGGATTTGCTCTTCCGCTTAAAGAAGAACACAAACTTTTCCTAGTTCAGGCTCTGATCCCCCTTCACAAACCAAGATGCTTACAAATGTACCATCAGCAGTTGTCCTACTGCATTTCACAGTTTGTCGAGAAAGATTGCAAGCTTGCAGATACTGTTATAAGAGGGCTGTTAAAGTACTGGCCAATCACAAATAGTTCAAAGGAAGTCATGTTCCTAAGTGAGCTCGAGGAAACTTTAGAGGCAACTCAGCCAGCAGAATTTCAAACATGTATGGTACCACTCTTCCGCCAAATATCTTGTTGCTTGAGCAGTTCACACTTTCAGGACTTAATCAGACAAAACCGTAAAGTCATATTGCCCATTATCTTTCCTGCTTTGGAGAAGAATGGCCTCAACCACTGGAACCAAGTGGCACGGAGGTTGACATTAAACATCCGTAAAATCTACTCTGACATTGATCCTGAGCTATTTGAGGAGTGTTTGCTCAAATTTCAAGAAGATGAAGCAAAAGAGGAGGAGGTTAAAGCAAAACATGTAGCCACCTGGAAGCACTTGGAAGAGATTGCTGCTTCTAACGCTGTCAGCAGTGAAGCAGTTGTTGGCTGCTTGGACCCAACCCAGACATCTCCAAGCTAA

Protein Analysis

508

Amino Acids

57.76

Weight (kDa)

6.27

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 90 - 485 2.5e-164 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1046
Acc65I GGTACC 1 cut(s) 1162
AccB1I GGYRCC 1 cut(s) 1162
AciI CCGC 4 cut(s) 117, 391, 902, 1174
AclWI GGATC 5 cut(s) 702, 707, 720, 937, 1340
AcoI YGGCCR 2 cut(s) 196, 1067
AcsI RAATTY 7 cut(s) 10, 62, 184, 238, 487, 1145, 1376
AfaI GTAC 8 cut(s) 156, 285, 602, 662, 731, 977, 1064, 1164
AfiI CCNNNNNNNGG 2 cut(s) 164, 934
AflIII ACRYGT 2 cut(s) 1154, 1420
AgsI TTSAA 8 cut(s) 91, 111, 147, 183, 830, 1086, 1151, 1382
AjnI CCWGG 1 cut(s) 1430
AjuI GAANNNNNNNTTGG 2 cut(s) 1470, 1502
AloI GAACNNNNNNTCC 2 cut(s) 1082, 1114
AluBI AGCT 8 cut(s) 25, 211, 322, 409, 1030, 1111, 1354, 1521
AluI AGCT 8 cut(s) 25, 211, 322, 409, 1030, 1111, 1354, 1521
Alw21I GWGCWC 1 cut(s) 1113
Alw26I GTCTC 1 cut(s) 629
AlwI GGATC 5 cut(s) 702, 707, 720, 937, 1340
AlwNI CAGNNNCTG 2 cut(s) 940, 1040
Ama87I CYCGRG 2 cut(s) 632, 1112
AoxI GGCC 5 cut(s) 134, 166, 196, 1067, 1276
ApeKI GCWGC 2 cut(s) 1454, 1491
ApoI RAATTY 7 cut(s) 10, 62, 184, 238, 487, 1145, 1376
ArsI GACNNNNNNTTYG 2 cut(s) 472, 504
AseI ATTAAT 1 cut(s) 141
Asp700I GAANNNNTTC 3 cut(s) 264, 491, 609
Asp718I GGTACC 1 cut(s) 1162
AspA2I CCTAGG 2 cut(s) 29, 716
AspS9I GGNCC 3 cut(s) 166, 571, 1498
AsuHPI GGTGA 2 cut(s) 131, 490
AvaI CYCGRG 2 cut(s) 632, 1112
AvaII GGWCC 2 cut(s) 571, 1498
AvrII CCTAGG 2 cut(s) 29, 716
BaeI ACNNNNGTAYC 2 cut(s) 959, 992
BalI TGGCCA 2 cut(s) 198, 1069
BamHI GGATCC 1 cut(s) 712
BanI GGYRCC 1 cut(s) 1162
BanII GRGCYC 1 cut(s) 1113
Bbv12I GWGCWC 1 cut(s) 1113
BbvI GCAGC 2 cut(s) 1441, 1478
BccI CCATC 2 cut(s) 562, 987
BceAI ACGGC 1 cut(s) 22
BcgI CGANNNNNNTGC 2 cut(s) 623, 657
BciT130I CCWGG 1 cut(s) 1432
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 629
BfaI CTAG 4 cut(s) 30, 404, 717, 929
BfmI CTRYAG 1 cut(s) 102
BisI GCNGC 3 cut(s) 392, 1455, 1492
BlnI CCTAGG 2 cut(s) 29, 716
BlsI GCNGC 3 cut(s) 393, 1456, 1493
BmcAI AGTACT 2 cut(s) 731, 1064
Bme1390I CCNGG 1 cut(s) 1432
Bme18I GGWCC 2 cut(s) 571, 1498
BmeT110I CYCGRG 2 cut(s) 632, 1112
BmgT120I GGNCC 3 cut(s) 166, 571, 1498
BmiI GGNNCC 6 cut(s) 561, 573, 714, 1164, 1292, 1500
BmrFI CCNGG 1 cut(s) 1432
BmsI GCATC 5 cut(s) 631, 635, 757, 784, 953
Bpu10I CCTNAGC 1 cut(s) 1350
BpuEI CTTGAG 2 cut(s) 214, 1213
Bsa29I ATCGAT 1 cut(s) 670
BsaJI CCNNGG 3 cut(s) 29, 199, 716
Bsc4I CCNNNNNNNGG 2 cut(s) 164, 934
Bse1I ACTGG 3 cut(s) 439, 1070, 1292
BseBI CCWGG 1 cut(s) 1432
BseCI ATCGAT 1 cut(s) 670
BseDI CCNNGG 3 cut(s) 29, 199, 716
BseGI GGATG 1 cut(s) 1320
BseLI CCNNNNNNNGG 2 cut(s) 164, 934
BseMII CTCAG 7 cut(s) 285, 362, 605, 699, 846, 1148, 1341
BseNI ACTGG 3 cut(s) 439, 1070, 1292
BseRI GAGGAG 6 cut(s) 566, 569, 572, 1376, 1415, 1418
BseXI GCAGC 2 cut(s) 1441, 1478
BshFI GGCC 5 cut(s) 136, 168, 198, 1069, 1278
BshNI GGYRCC 1 cut(s) 1162
BshVI ATCGAT 1 cut(s) 670
BsiHKAI GWGCWC 1 cut(s) 1113
BsiHKCI CYCGRG 2 cut(s) 632, 1112
BslI CCNNNNNNNGG 2 cut(s) 164, 934
BsmAI GTCTC 1 cut(s) 629
BsmI GAATGC 1 cut(s) 97
BsnI GGCC 5 cut(s) 136, 168, 198, 1069, 1278
BsoBI CYCGRG 2 cut(s) 632, 1112
Bsp1286I GDGCHC 1 cut(s) 1113
Bsp143I GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
Bsp19I CCATGG 1 cut(s) 199
BspACI CCGC 4 cut(s) 117, 391, 902, 1174
BspANI GGCC 5 cut(s) 136, 168, 198, 1069, 1278
BspCNI CTCAG 7 cut(s) 286, 363, 606, 700, 847, 1147, 1342
BspDI ATCGAT 1 cut(s) 670
BspLI GGNNCC 6 cut(s) 561, 573, 714, 1164, 1292, 1500
BspPI GGATC 5 cut(s) 702, 707, 720, 937, 1340
BspQI GCTCTTC 1 cut(s) 903
BspT107I GGYRCC 1 cut(s) 1162
BsrI ACTGG 3 cut(s) 439, 1070, 1292
BssECI CCNNGG 3 cut(s) 29, 199, 716
BssMI GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
BssT1I CCWWGG 3 cut(s) 29, 199, 716
Bst2UI CCWGG 1 cut(s) 1432
Bst4CI ACNGT 4 cut(s) 484, 1008, 1042, 1232
Bst6I CTCTTC 3 cut(s) 903, 1175, 1440
BstAPI GCANNNNNTGC 2 cut(s) 92, 400
BstC8I GCNNGC 3 cut(s) 1028, 1032, 1140
BstDSI CCRYGG 1 cut(s) 199
BstENI CCTNNNNNAGG 1 cut(s) 932
BstF5I GGATG 1 cut(s) 1320
BstKTI GATC 7 cut(s) 6, 670, 674, 697, 715, 945, 1348
BstMAI GTCTC 1 cut(s) 629
BstMBI GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
BstMWI GCNNNNNNNGC 5 cut(s) 92, 269, 400, 650, 1463
BstNI CCWGG 1 cut(s) 1432
BstNSI RCATGY 2 cut(s) 1158, 1424
BstSCI CCNGG 1 cut(s) 1430
BstSFI CTRYAG 1 cut(s) 102
BstV1I GCAGC 2 cut(s) 1441, 1478
BstX2I RGATCY 2 cut(s) 694, 712
BstYI RGATCY 2 cut(s) 694, 712
Bsu15I ATCGAT 1 cut(s) 670
BsuRI GGCC 5 cut(s) 136, 168, 198, 1069, 1278
BsuTUI ATCGAT 1 cut(s) 670
BtgI CCRYGG 1 cut(s) 199
BtgZI GCGATG 2 cut(s) 612, 761
BtsCI GGATG 1 cut(s) 1320
BtsI GCAGTG 1 cut(s) 1480
BtsIMutI CAGTG 4 cut(s) 351, 444, 1285, 1480
Cac8I GCNNGC 3 cut(s) 1028, 1032, 1140
CaiI CAGNNNCTG 2 cut(s) 940, 1040
Cfr13I GGNCC 3 cut(s) 166, 571, 1498
ClaI ATCGAT 1 cut(s) 670
Csp6I GTAC 8 cut(s) 155, 284, 601, 661, 730, 976, 1063, 1163
CviAII CATG 5 cut(s) 200, 579, 1096, 1155, 1421
CviQI GTAC 8 cut(s) 155, 284, 601, 661, 730, 976, 1063, 1163
DpnI GATC 7 cut(s) 5, 669, 673, 696, 714, 944, 1347
DpnII GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
EaeI YGGCCR 2 cut(s) 196, 1067
Eam1104I CTCTTC 3 cut(s) 903, 1175, 1440
EarI CTCTTC 3 cut(s) 903, 1175, 1440
EciI GGCGGA 1 cut(s) 1163
Ecl136II GAGCTC 1 cut(s) 1111
Eco130I CCWWGG 3 cut(s) 29, 199, 716
Eco24I GRGCYC 1 cut(s) 1113
Eco47I GGWCC 2 cut(s) 571, 1498
Eco53kI GAGCTC 1 cut(s) 1111
Eco88I CYCGRG 2 cut(s) 632, 1112
EcoICRI GAGCTC 1 cut(s) 1111
EcoNI CCTNNNNNAGG 1 cut(s) 932
EcoRI GAATTC 1 cut(s) 238
EcoRII CCWGG 1 cut(s) 1430
EcoT14I CCWWGG 3 cut(s) 29, 199, 716
EcoT38I GRGCYC 1 cut(s) 1113
ErhI CCWWGG 3 cut(s) 29, 199, 716
FaeI CATG 5 cut(s) 203, 582, 1099, 1158, 1424
FalI AAGNNNNNCTT 4 cut(s) 290, 322, 311, 343
FatI CATG 5 cut(s) 199, 578, 1095, 1154, 1420
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 3 cut(s) 392, 1455, 1492
FokI GGATG 1 cut(s) 1307
FriOI GRGCYC 1 cut(s) 1113
Fsp4HI GCNGC 3 cut(s) 392, 1455, 1492
FspBI CTAG 4 cut(s) 30, 404, 717, 929
GluI GCNGC 3 cut(s) 392, 1455, 1492
HaeIII GGCC 5 cut(s) 136, 168, 198, 1069, 1278
Hin1II CATG 5 cut(s) 203, 582, 1099, 1158, 1424
HincII GTYRAC 2 cut(s) 226, 1311
HindII GTYRAC 2 cut(s) 226, 1311
HindIII AAGCTT 2 cut(s) 23, 1028
HinfI GANTC 4 cut(s) 55, 173, 179, 704
HphI GGTGA 2 cut(s) 131, 490
Hpy166II GTNNAC 5 cut(s) 226, 444, 601, 1202, 1311
Hpy188I TCNGA 9 cut(s) 178, 237, 295, 372, 615, 709, 942, 1223, 1339
Hpy188III TCNNGA 7 cut(s) 7, 59, 111, 1015, 1211, 1349, 1382
Hpy8I GTNNAC 5 cut(s) 226, 444, 601, 1202, 1311
HpyAV CCTTC 3 cut(s) 530, 787, 959
HpyCH4III ACNGT 4 cut(s) 484, 1008, 1042, 1232
HpyCH4IV ACGT 1 cut(s) 398
HpyF10VI GCNNNNNNNGC 5 cut(s) 92, 269, 400, 650, 1463
HpySE526I ACGT 1 cut(s) 398
Hsp92II CATG 5 cut(s) 203, 582, 1099, 1158, 1424
KpnI GGTACC 1 cut(s) 1166
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
LguI GCTCTTC 1 cut(s) 903
LmnI GCTCC 2 cut(s) 216, 559
Lsp1109I GCAGC 2 cut(s) 1441, 1478
LweI GCATC 5 cut(s) 631, 635, 757, 784, 953
MaeI CTAG 4 cut(s) 30, 404, 717, 929
MaeII ACGT 1 cut(s) 398
MaeIII GTNAC 4 cut(s) 244, 421, 478, 582
MalI GATC 7 cut(s) 5, 669, 673, 696, 714, 944, 1347
MboI GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
MboII GAAGA 8 cut(s) 66, 328, 890, 923, 1162, 1282, 1397, 1457
MflI RGATCY 2 cut(s) 694, 712
MhlI GDGCHC 1 cut(s) 1113
MlsI TGGCCA 2 cut(s) 198, 1069
MluNI TGGCCA 2 cut(s) 198, 1069
Mox20I TGGCCA 2 cut(s) 198, 1069
MroXI GAANNNNTTC 3 cut(s) 264, 491, 609
MscI TGGCCA 2 cut(s) 198, 1069
MseI TTAA 8 cut(s) 14, 141, 734, 906, 1058, 1217, 1316, 1410
Msp20I TGGCCA 2 cut(s) 198, 1069
MspR9I CCNGG 1 cut(s) 1432
Mva1269I GAATGC 1 cut(s) 97
MvaI CCWGG 1 cut(s) 1432
MwoI GCNNNNNNNGC 5 cut(s) 92, 269, 400, 650, 1463
NcoI CCATGG 1 cut(s) 199
NdeII GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
NlaIII CATG 5 cut(s) 203, 582, 1099, 1158, 1424
NlaIV GGNNCC 6 cut(s) 561, 573, 714, 1164, 1292, 1500
NmeAIII GCCGAG 1 cut(s) 76
NmuCI GTSAC 2 cut(s) 478, 582
NspI RCATGY 2 cut(s) 1158, 1424
PaeR7I CTCGAG 1 cut(s) 1112
PciI ACATGT 2 cut(s) 1154, 1420
PciSI GCTCTTC 1 cut(s) 903
PctI GAATGC 1 cut(s) 97
PdmI GAANNNNTTC 3 cut(s) 264, 491, 609
PfeI GAWTC 4 cut(s) 55, 173, 179, 704
PkrI GCNGC 3 cut(s) 393, 1456, 1493
PscI ACATGT 2 cut(s) 1154, 1420
PshBI ATTAAT 1 cut(s) 141
PsiI TTATAA 1 cut(s) 1046
Psp124BI GAGCTC 1 cut(s) 1113
Psp6I CCWGG 1 cut(s) 1430
PspGI CCWGG 1 cut(s) 1430
PspN4I GGNNCC 6 cut(s) 561, 573, 714, 1164, 1292, 1500
PspPI GGNCC 3 cut(s) 166, 571, 1498
PspXI VCTCGAGB 1 cut(s) 1112
PstNI CAGNNNCTG 2 cut(s) 940, 1040
PsuI RGATCY 2 cut(s) 694, 712
RsaI GTAC 8 cut(s) 156, 285, 602, 662, 731, 977, 1064, 1164
RsaNI GTAC 8 cut(s) 155, 284, 601, 661, 730, 976, 1063, 1163
SacI GAGCTC 1 cut(s) 1113
SapI GCTCTTC 1 cut(s) 903
SaqAI TTAA 8 cut(s) 14, 141, 734, 906, 1058, 1217, 1316, 1410
SatI GCNGC 3 cut(s) 392, 1455, 1492
Sau3AI GATC 7 cut(s) 3, 667, 671, 694, 712, 942, 1345
Sau96I GGNCC 3 cut(s) 166, 571, 1498
ScaI AGTACT 2 cut(s) 731, 1064
ScrFI CCNGG 1 cut(s) 1432
SduI GDGCHC 1 cut(s) 1113
SfaNI GCATC 5 cut(s) 631, 635, 757, 784, 953
SfcI CTRYAG 1 cut(s) 102
Sfr274I CTCGAG 1 cut(s) 1112
SinI GGWCC 2 cut(s) 571, 1498
SlaI CTCGAG 1 cut(s) 1112
SmlI CTYRAG 3 cut(s) 229, 1112, 1192
SmoI CTYRAG 3 cut(s) 229, 1112, 1192
SsiI CCGC 4 cut(s) 117, 391, 902, 1174
SspMI CTAG 4 cut(s) 30, 404, 717, 929
SstI GAGCTC 1 cut(s) 1113
StyD4I CCNGG 1 cut(s) 1430
StyI CCWWGG 3 cut(s) 29, 199, 716
TaaI ACNGT 4 cut(s) 484, 1008, 1042, 1232
TaiI ACGT 1 cut(s) 401
TaqI TCGA 3 cut(s) 670, 1014, 1113
TatI WGTACW 3 cut(s) 660, 729, 1062
TauI GCSGC 1 cut(s) 394
TfiI GAWTC 4 cut(s) 55, 173, 179, 704
Tru1I TTAA 8 cut(s) 14, 141, 734, 906, 1058, 1217, 1316, 1410
Tru9I TTAA 8 cut(s) 14, 141, 734, 906, 1058, 1217, 1316, 1410
TscAI CASTG 4 cut(s) 358, 451, 1292, 1480
TseFI GTSAC 2 cut(s) 478, 582
TseI GCWGC 2 cut(s) 1454, 1491
Tsp45I GTSAC 2 cut(s) 478, 582
TspDTI ATGAA 3 cut(s) 273, 775, 1404
TspGWI ACGGA 2 cut(s) 1313, 1318
TspRI CASTG 4 cut(s) 358, 451, 1292, 1480
VpaK11BI GGWCC 2 cut(s) 571, 1498
VspI ATTAAT 1 cut(s) 141
XagI CCTNNNNNAGG 1 cut(s) 932
XapI RAATTY 7 cut(s) 10, 62, 184, 238, 487, 1145, 1376
XceI RCATGY 2 cut(s) 1158, 1424
XhoI CTCGAG 1 cut(s) 1112
XmaJI CCTAGG 2 cut(s) 29, 716
XmnI GAANNNNTTC 3 cut(s) 264, 491, 609
XspI CTAG 4 cut(s) 30, 404, 717, 929
ZrmI AGTACT 2 cut(s) 731, 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.