Prupe.3G299400_v2.0.a1

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
26476968 .. 26481090
4123 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G299400.2

Sequence Viewer

Length: 1551 bp
ATGATCAAACAGATACTTAATAGGCTCCCGAGGAAGCCCTCTAAGTCAGCTGAAAATCGTGAAGGAGGATCTTCTAACTCTTCTTCAAATGCTTCCACCAGTTCAAGAGGCGGCTCTTTAGCAAGTAGCAGATATGTGAATTCGGGTACTTCATCTCTTTCGGGCCCTAATTCTACTCCAAATTTTGGAGTAAACGTGAATTCAAAGCTTAATGGGAACTCATTGGCTTCTCCATATGAGGCATTGCCTAGTTTCAAAGATGTTCCAAATGCAGAGAAGCAGAACTTATTCATAAAAAAGTTGAACTTGTGTTGTGTTATCTTTGACTTCAGTGACCCAACAAAGAACCTCAAAGAAAAGGACATCAAGCGACAGACATTGGTAGAGCTTGTGGATTACATTGCTTCTGCTAATGGGAAATTCTCAGAAACTGTCATGCAAGAAATTGTAAAGATGGTGTGCGTAAATTTATTTAGAACACTCACTTCTCCACCCCTCGAAAACAAAGCTTTAGAGGCCTTTGACTTAGAAGAGGAAGAGCCCTCAATGGACCCAGCATGGCCACACTTGCAAGTTGTGTATGAATTCTTCCTGAGGTTTGTGGCATCACCTGAGACAGATGCAAAGTTGGCTAAGAGGTACATTGACCACTCATTTGTTCTCAGGTTGTTAGGTCTTTTTGATTCAGAGGACCATAGAGAGAGGGATTACTTGAAAACGGTTCTGCACCGCATCTATGGGAAATTTATGGTGCACCGCCCATTCATCAGGAAAGCTATCAACAACATCTTCTATCATTTTATTTTTGAAACTGAAAAGCATAATGGGATTGCAGAGCTGTTGGAGATTTTGGGAAGTATAATAAACGGTTTTGCTCTGCCACTGAAAGAAGAGCACAAACTCTTTCTTGTTCGAGTGCTTATTCCACTTCACAAACCCAAATGCATACCCTTGTACCACCAGCAGTTATCTTACTGCATTACCCAATTTGTGGAGAAAGACTGCAAACTTGCGGATACAATAATCCGTGGTTTACTAAAATATTGGCCTATTACAAATAGTTCTAAGGAGGTCATGTTCTTAGGGGAGCTGGAAGAAGTTCTAGAAGCAACTCAACCTGCAGAATTTCAACGCTGTATGGTACCTTTGTTTCGCCAAATTGGCCGATGCTTGAGCAGTTCACATTTTCAGGTGGCAGAGAGAGCTTTGTTCTTATGGAATAATGATCACATTGCCAACCTAATCAAACAGAACCGCAGTGTCTTACTGCCAATCATATTCCCTTCATTGGAGAAAAATGCAAGAAACCACTGGAACCAGGCAGTACAGAGCCTGACTCTAAATGTCCGGAAGATTTTCTCTGATATTGACCCTGAGCTTTTTGAGGAATGCTTGCTCAAATTTCAGGAAGATGAAGTACAAGAGAAGGAACTTAATTTGAGACGTGAAATCACTTGGAAGCGTTTGGAAGAGATTGCTGCCAAGAAGGCTACAAGCAATGAAGCAGTGCTTGTGTCCCCCAGAAAAGCCACCGGCAAACCTTCTGGCTAG

Protein Analysis

517

Amino Acids

58.95

Weight (kDa)

8.55

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1126
Acc65I GGTACC 1 cut(s) 1141
AccB1I GGYRCC 1 cut(s) 1141
AccB7I CCANNNNNTGG 2 cut(s) 185, 991
AccIII TCCGGA 1 cut(s) 1347
AciI CCGC 5 cut(s) 111, 730, 757, 1013, 1255
AclWI GGATC 1 cut(s) 76
AcoI YGGCCR 2 cut(s) 560, 1162
AcsI RAATTY 9 cut(s) 139, 181, 199, 419, 466, 584, 743, 1124, 1400
AcuI CTGAAG 1 cut(s) 313
AfaI GTAC 6 cut(s) 148, 641, 956, 1143, 1326, 1419
AfiI CCNNNNNNNGG 3 cut(s) 185, 991, 1288
AgsI TTSAA 8 cut(s) 87, 105, 204, 256, 304, 715, 809, 1130
AjiI CACGTC 1 cut(s) 1445
AjnI CCWGG 1 cut(s) 1317
AloI GAACNNNNNNTCC 2 cut(s) 1061, 1093
AluBI AGCT 9 cut(s) 50, 208, 388, 509, 776, 838, 1090, 1205, 1378
AluI AGCT 9 cut(s) 50, 208, 388, 509, 776, 838, 1090, 1205, 1378
Alw21I GWGCWC 2 cut(s) 756, 897
Alw26I GTCTC 2 cut(s) 608, 1435
Alw44I GTGCAC 1 cut(s) 752
AlwI GGATC 1 cut(s) 76
AlwNI CAGNNNCTG 2 cut(s) 431, 1333
Ama87I CYCGRG 1 cut(s) 28
Aor13HI TCCGGA 1 cut(s) 1347
AoxI GGCC 5 cut(s) 163, 516, 560, 1046, 1162
ApaI GGGCCC 1 cut(s) 167
ApaLI GTGCAC 1 cut(s) 752
ApeKI GCWGC 1 cut(s) 1478
ApoI RAATTY 9 cut(s) 139, 181, 199, 419, 466, 584, 743, 1124, 1400
ArsI GACNNNNNNTTYG 2 cut(s) 638, 670
Asp700I GAANNNNTTC 3 cut(s) 287, 1098, 1355
Asp718I GGTACC 1 cut(s) 1141
AspS9I GGNCC 4 cut(s) 163, 164, 550, 691
AsuHPI GGTGA 1 cut(s) 600
AvaI CYCGRG 1 cut(s) 28
AvaII GGWCC 2 cut(s) 550, 691
AxyI CCTNAGG 1 cut(s) 593
BaeGI GKGCMC 2 cut(s) 167, 756
BaeI ACNNNNGTAYC 4 cut(s) 938, 971, 1133, 1166
BalI TGGCCA 1 cut(s) 562
BanI GGYRCC 1 cut(s) 1141
BanII GRGCYC 2 cut(s) 167, 543
BarI GAAGNNNNNNTAC 4 cut(s) 572, 604, 1401, 1433
Bbv12I GWGCWC 2 cut(s) 756, 897
BbvI GCAGC 1 cut(s) 1465
BccI CCATC 1 cut(s) 448
BciT130I CCWGG 1 cut(s) 1319
BciVI GTATCC 1 cut(s) 1009
BclI TGATCA 2 cut(s) 3, 1225
BcoDI GTCTC 2 cut(s) 608, 1435
BfaI CTAG 3 cut(s) 249, 1103, 1549
BfmI CTRYAG 1 cut(s) 1119
BfuAI ACCTGC 1 cut(s) 1126
BfuI GTATCC 1 cut(s) 1009
BglI GCCNNNNNGGC 2 cut(s) 1161, 1487
BisI GCNGC 2 cut(s) 112, 1479
BlsI GCNGC 2 cut(s) 113, 1480
Bme1390I CCNGG 1 cut(s) 1319
Bme18I GGWCC 2 cut(s) 550, 691
BmeT110I CYCGRG 1 cut(s) 28
BmgBI CACGTC 1 cut(s) 1445
BmgT120I GGNCC 4 cut(s) 163, 164, 550, 691
BmiI GGNNCC 5 cut(s) 26, 165, 552, 1143, 1316
BmrFI CCNGG 1 cut(s) 1319
BmsI GCATC 4 cut(s) 610, 614, 741, 1157
BplI GAGNNNNNCTC 2 cut(s) 1321, 1353
Bpu10I CCTNAGC 1 cut(s) 1374
BpuEI CTTGAG 1 cut(s) 1192
BsaJI CCNNGG 2 cut(s) 29, 1027
BsaWI WCCGGW 1 cut(s) 1347
BsaXI ACNNNNNCTCC 4 cut(s) 180, 210, 1061, 1091
Bsc4I CCNNNNNNNGG 3 cut(s) 185, 991, 1288
Bse118I RCCGGY 1 cut(s) 1532
Bse1I ACTGG 2 cut(s) 99, 1316
Bse21I CCTNAGG 1 cut(s) 593
Bse3DI GCAATG 4 cut(s) 242, 399, 1230, 1504
BseAI TCCGGA 1 cut(s) 1347
BseBI CCWGG 1 cut(s) 1319
BseDI CCNNGG 2 cut(s) 29, 1027
BseLI CCNNNNNNNGG 3 cut(s) 185, 991, 1288
BseMI GCAATG 4 cut(s) 242, 399, 1230, 1504
BseMII CTCAG 5 cut(s) 438, 584, 603, 676, 1365
BseNI ACTGG 2 cut(s) 99, 1316
BseSI GKGCMC 2 cut(s) 167, 756
BseXI GCAGC 1 cut(s) 1465
BseYI CCCAGC 1 cut(s) 553
BsgI GTGCAG 1 cut(s) 710
BshFI GGCC 5 cut(s) 165, 518, 562, 1048, 1164
BshNI GGYRCC 1 cut(s) 1141
BsiHKAI GWGCWC 2 cut(s) 756, 897
BsiHKCI CYCGRG 1 cut(s) 28
BsiSI CCGG 2 cut(s) 1348, 1533
BslFI GGGAC 1 cut(s) 1501
BslI CCNNNNNNNGG 3 cut(s) 185, 991, 1288
BsmAI GTCTC 2 cut(s) 608, 1435
BsmBI CGTCTC 1 cut(s) 1435
BsmFI GGGAC 1 cut(s) 1501
BsmI GAATGC 1 cut(s) 1394
BsnI GGCC 5 cut(s) 165, 518, 562, 1048, 1164
BsoBI CYCGRG 1 cut(s) 28
Bsp120I GGGCCC 1 cut(s) 163
Bsp1286I GDGCHC 4 cut(s) 167, 543, 756, 897
Bsp13I TCCGGA 1 cut(s) 1347
Bsp143I GATC 3 cut(s) 3, 68, 1225
BspACI CCGC 5 cut(s) 111, 730, 757, 1013, 1255
BspANI GGCC 5 cut(s) 165, 518, 562, 1048, 1164
BspCNI CTCAG 5 cut(s) 437, 585, 604, 675, 1366
BspEI TCCGGA 1 cut(s) 1347
BspLI GGNNCC 5 cut(s) 26, 165, 552, 1143, 1316
BspMAI CTGCAG 1 cut(s) 1123
BspMI ACCTGC 1 cut(s) 1126
BspPI GGATC 1 cut(s) 76
BspQI GCTCTTC 2 cut(s) 531, 885
BspT107I GGYRCC 1 cut(s) 1141
BsrDI GCAATG 4 cut(s) 242, 399, 1230, 1504
BsrFI RCCGGY 1 cut(s) 1532
BsrI ACTGG 2 cut(s) 99, 1316
BssAI RCCGGY 1 cut(s) 1532
BssECI CCNNGG 2 cut(s) 29, 1027
BssMI GATC 3 cut(s) 3, 68, 1225
Bst2UI CCWGG 1 cut(s) 1319
Bst4CI ACNGT 3 cut(s) 433, 721, 869
Bst6I CTCTTC 5 cut(s) 85, 525, 531, 885, 1464
BstC8I GCNNGC 1 cut(s) 1394
BstDSI CCRYGG 1 cut(s) 1027
BstKTI GATC 3 cut(s) 6, 71, 1228
BstMAI GTCTC 2 cut(s) 608, 1435
BstMBI GATC 3 cut(s) 3, 68, 1225
BstMWI GCNNNNNNNGC 6 cut(s) 515, 568, 629, 1161, 1202, 1487
BstNI CCWGG 1 cut(s) 1319
BstSCI CCNGG 1 cut(s) 1317
BstSFI CTRYAG 1 cut(s) 1119
BstSLI GKGCMC 2 cut(s) 167, 756
BstV1I GCAGC 1 cut(s) 1465
BstX2I RGATCY 1 cut(s) 68
BstYI RGATCY 1 cut(s) 68
Bsu36I CCTNAGG 1 cut(s) 593
BsuI GTATCC 1 cut(s) 1009
BsuRI GGCC 5 cut(s) 165, 518, 562, 1048, 1164
BtgI CCRYGG 1 cut(s) 1027
BtrI CACGTC 1 cut(s) 1445
BtsI GCAGTG 2 cut(s) 1264, 1512
BtsIMutI CAGTG 5 cut(s) 337, 881, 1264, 1309, 1512
BveI ACCTGC 1 cut(s) 1126
Cac8I GCNNGC 1 cut(s) 1394
CaiI CAGNNNCTG 2 cut(s) 431, 1333
Cfr10I RCCGGY 1 cut(s) 1532
Cfr13I GGNCC 4 cut(s) 163, 164, 550, 691
Csp6I GTAC 6 cut(s) 147, 640, 955, 1142, 1325, 1418
CviAII CATG 3 cut(s) 436, 558, 1075
CviQI GTAC 6 cut(s) 147, 640, 955, 1142, 1325, 1418
DpnI GATC 3 cut(s) 5, 70, 1227
DpnII GATC 3 cut(s) 3, 68, 1225
EaeI YGGCCR 2 cut(s) 560, 1162
Eam1104I CTCTTC 5 cut(s) 85, 525, 531, 885, 1464
EarI CTCTTC 5 cut(s) 85, 525, 531, 885, 1464
Eco147I AGGCCT 1 cut(s) 518
Eco24I GRGCYC 2 cut(s) 167, 543
Eco47I GGWCC 2 cut(s) 550, 691
Eco57I CTGAAG 1 cut(s) 313
Eco81I CCTNAGG 1 cut(s) 593
Eco88I CYCGRG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 164
EcoRI GAATTC 3 cut(s) 139, 199, 584
EcoRII CCWGG 1 cut(s) 1317
EcoT22I ATGCAT 1 cut(s) 947
EcoT38I GRGCYC 2 cut(s) 167, 543
Esp3I CGTCTC 1 cut(s) 1435
FaeI CATG 3 cut(s) 439, 561, 1078
FalI AAGNNNNNCTT 6 cut(s) 269, 301, 290, 322, 1494, 1526
FaqI GGGAC 1 cut(s) 1501
FatI CATG 3 cut(s) 435, 557, 1074
FauNDI CATATG 1 cut(s) 235
FbaI TGATCA 2 cut(s) 3, 1225
Fnu4HI GCNGC 2 cut(s) 112, 1479
FriOI GRGCYC 2 cut(s) 167, 543
Fsp4HI GCNGC 2 cut(s) 112, 1479
FspBI CTAG 3 cut(s) 249, 1103, 1549
GluI GCNGC 2 cut(s) 112, 1479
GsaI CCCAGC 1 cut(s) 557
HaeIII GGCC 5 cut(s) 165, 518, 562, 1048, 1164
HapII CCGG 2 cut(s) 1348, 1533
Hin1II CATG 3 cut(s) 439, 561, 1078
HindIII AAGCTT 2 cut(s) 206, 507
HinfI GANTC 2 cut(s) 683, 1336
HpaII CCGG 2 cut(s) 1348, 1533
HphI GGTGA 1 cut(s) 600
Hpy166II GTNNAC 4 cut(s) 193, 754, 1034, 1181
Hpy188I TCNGA 3 cut(s) 427, 688, 1363
Hpy188III TCNNGA 8 cut(s) 28, 59, 105, 592, 769, 1103, 1348, 1406
Hpy8I GTNNAC 4 cut(s) 193, 754, 1034, 1181
HpyAV CCTTC 5 cut(s) 56, 1293, 1420, 1480, 1551
HpyCH4III ACNGT 3 cut(s) 433, 721, 869
HpyCH4IV ACGT 2 cut(s) 195, 1444
HpyF10VI GCNNNNNNNGC 6 cut(s) 515, 568, 629, 1161, 1202, 1487
HpySE526I ACGT 2 cut(s) 195, 1444
Hsp92II CATG 3 cut(s) 439, 561, 1078
Kpn2I TCCGGA 1 cut(s) 1347
KpnI GGTACC 1 cut(s) 1145
Ksp22I TGATCA 2 cut(s) 3, 1225
Kzo9I GATC 3 cut(s) 3, 68, 1225
LguI GCTCTTC 2 cut(s) 531, 885
LmnI GCTCC 2 cut(s) 30, 1087
Lsp1109I GCAGC 1 cut(s) 1465
LweI GCATC 4 cut(s) 610, 614, 741, 1157
MaeI CTAG 3 cut(s) 249, 1103, 1549
MaeII ACGT 2 cut(s) 195, 1444
MaeIII GTNAC 1 cut(s) 332
MalI GATC 3 cut(s) 5, 70, 1227
MboI GATC 3 cut(s) 3, 68, 1225
MflI RGATCY 1 cut(s) 68
MhlI GDGCHC 4 cut(s) 167, 543, 756, 897
MlsI TGGCCA 1 cut(s) 562
MluNI TGGCCA 1 cut(s) 562
MlyI GAGTC 1 cut(s) 1330
MmeI TCCRAC 1 cut(s) 822
Mox20I TGGCCA 1 cut(s) 562
Mph1103I ATGCAT 1 cut(s) 947
MroI TCCGGA 1 cut(s) 1347
MroXI GAANNNNTTC 3 cut(s) 287, 1098, 1355
MscI TGGCCA 1 cut(s) 562
MseI TTAA 3 cut(s) 18, 210, 1434
Msp20I TGGCCA 1 cut(s) 562
MspA1I CMGCKG 1 cut(s) 50
MspI CCGG 2 cut(s) 1348, 1533
MspR9I CCNGG 1 cut(s) 1319
Mva1269I GAATGC 1 cut(s) 1394
MvaI CCWGG 1 cut(s) 1319
MwoI GCNNNNNNNGC 6 cut(s) 515, 568, 629, 1161, 1202, 1487
NdeI CATATG 1 cut(s) 235
NdeII GATC 3 cut(s) 3, 68, 1225
NlaIII CATG 3 cut(s) 439, 561, 1078
NlaIV GGNNCC 5 cut(s) 26, 165, 552, 1143, 1316
NmuCI GTSAC 1 cut(s) 332
NsiI ATGCAT 1 cut(s) 947
PceI AGGCCT 1 cut(s) 518
PciSI GCTCTTC 2 cut(s) 531, 885
PctI GAATGC 1 cut(s) 1394
PdmI GAANNNNTTC 3 cut(s) 287, 1098, 1355
PfeI GAWTC 1 cut(s) 683
PflMI CCANNNNNTGG 2 cut(s) 185, 991
PkrI GCNGC 2 cut(s) 113, 1480
PleI GAGTC 1 cut(s) 1330
PpsI GAGTC 1 cut(s) 1330
Psp6I CCWGG 1 cut(s) 1317
PspFI CCCAGC 1 cut(s) 553
PspGI CCWGG 1 cut(s) 1317
PspN4I GGNNCC 5 cut(s) 26, 165, 552, 1143, 1316
PspOMI GGGCCC 1 cut(s) 163
PspPI GGNCC 4 cut(s) 163, 164, 550, 691
PstI CTGCAG 1 cut(s) 1123
PstNI CAGNNNCTG 2 cut(s) 431, 1333
PsuI RGATCY 1 cut(s) 68
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 6 cut(s) 148, 641, 956, 1143, 1326, 1419
RsaNI GTAC 6 cut(s) 147, 640, 955, 1142, 1325, 1418
SapI GCTCTTC 2 cut(s) 531, 885
SaqAI TTAA 3 cut(s) 18, 210, 1434
SatI GCNGC 2 cut(s) 112, 1479
Sau3AI GATC 3 cut(s) 3, 68, 1225
Sau96I GGNCC 4 cut(s) 163, 164, 550, 691
SchI GAGTC 1 cut(s) 1330
ScrFI CCNGG 1 cut(s) 1319
SduI GDGCHC 4 cut(s) 167, 543, 756, 897
SfaNI GCATC 4 cut(s) 610, 614, 741, 1157
SfcI CTRYAG 1 cut(s) 1119
SinI GGWCC 2 cut(s) 550, 691
SmlI CTYRAG 1 cut(s) 1171
SmoI CTYRAG 1 cut(s) 1171
SseBI AGGCCT 1 cut(s) 518
SsiI CCGC 5 cut(s) 111, 730, 757, 1013, 1255
SspI AATATT 1 cut(s) 1043
SspMI CTAG 3 cut(s) 249, 1103, 1549
StuI AGGCCT 1 cut(s) 518
StyD4I CCNGG 1 cut(s) 1317
TaaI ACNGT 3 cut(s) 433, 721, 869
TaiI ACGT 2 cut(s) 198, 1447
TaqI TCGA 2 cut(s) 498, 913
TatI WGTACW 2 cut(s) 1324, 1417
TauI GCSGC 1 cut(s) 114
TfiI GAWTC 1 cut(s) 683
Tru1I TTAA 3 cut(s) 18, 210, 1434
Tru9I TTAA 3 cut(s) 18, 210, 1434
TscAI CASTG 5 cut(s) 337, 888, 1264, 1316, 1512
TseFI GTSAC 1 cut(s) 332
TseI GCWGC 1 cut(s) 1478
Tsp45I GTSAC 1 cut(s) 332
TspDTI ATGAA 7 cut(s) 141, 280, 597, 754, 1275, 1428, 1515
TspGWI ACGGA 1 cut(s) 1016
TspRI CASTG 5 cut(s) 337, 888, 1264, 1316, 1512
Van91I CCANNNNNTGG 2 cut(s) 185, 991
VneI GTGCAC 1 cut(s) 752
VpaK11BI GGWCC 2 cut(s) 550, 691
XapI RAATTY 9 cut(s) 139, 181, 199, 419, 466, 584, 743, 1124, 1400
XbaI TCTAGA 1 cut(s) 1102
XmnI GAANNNNTTC 3 cut(s) 287, 1098, 1355
XspI CTAG 3 cut(s) 249, 1103, 1549
Zsp2I ATGCAT 1 cut(s) 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.