Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0004450

Physical Location & Seq

Genomic Coordinates Forward (+)

22063993 .. 22068123

Gene Structure 4131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1220900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2742 bp

ATGCTTAAGATCCTCACAAATAGAGGATCCGGAGAATCCTTATTCATTTCCAAAAACCTTTGCAAAACCCCTCTATTCCCACCAGAGAGAAAAAGAAAGAGAGCGGAGGCGAAGATGGCCCTCTCTCGACTCCTTCTTCCGCAGCCATGGCATCATCATCATCTCCCCAAAACAGCGCTTCCCATATCGACAAGATGGTGTTCTTCTTCGTCGAGCGGTGCGGCGGAGAAATCGTCGGGTTCCGAGAACTCGAAGGAGAAGGAGCGAAGAGCTGCAGCGGCTGATAAGTCAGATAACAGCAAATATATGGAGATGCATAACAAAGTGGGGGGATCTTGGGATGCTCTGAAAGACATTTTTACTAATGTGAAGGAAAGAATGCTGGGAAGTCCCCGATTTCAGAAGCAACGAACTATCAAAGCAATTGACTCCGCATCTGGTAGGACAGTTCCGGAGGTCATTAAGACAAAGAATAGTCCACATGACACTGCAAATGATCAACCCAATTGTAGTATTCGAATGCCAAAAATCACAAGAGACTCTCACGGTTTCAAGGAGAATGTCTCAATGAGTCTAAGAAATGATATAATTGGGGAATGCTCTTCGTCTGAAGTACATGATGCTACAGCTTCTAAACGAGTCGAGGTGCATAAACATATAGATAGTACCGAGCTTGGCAAGTCTAAAGGTACAGCTCAGGCCTCAGTAGGTGTACTTTGTTCTTCAGAGAACTTGGCTGGTGTGATTGTGTCTGATGCTAGAAAGGAGCATGCTGGTCCAGAAAATGTAGAGAATAACTCAACAAATGTGTCATCAAATATAAGGGGGGAAGAATCTTTGAGCAATTTGATTGGTGTGGCTGTATCTAATAAAAAAGAGAAACATGTTGGTCGTAAAACTGTTGAAGATGGTGCAAGCGGAAGTTTAGTTCAATCATCTGAGGCCTTCATGGATTCTCAAATCGATGAAAGATGTGTTACAGAAACTGCAGCTTCGAATATAACACGGAAAATATCTTCCAAGGATATGGGTCAATCAGAAGCCAAGCCTAAATCACACAGAAAACTAGAGGAAGTCATGTCGGACAACATTGGGGTTCTCAAATCAGAAACTGAGTTCCAGTCCTGCTTAACACATCAGTTACCTGGTGAAGATTCTAGGATATTGCAAAAGGATGTTGCAAATGGATTCACAGAAGTTGGAAATCGAAACCATCAACGTGAGAAAACAACTTCAATATTTGATCAAACACCTACTGCAGGTACTGATGTGGGTAAAATGCCTGCATCATCTAAAAAGGTGGGGTTGGCAGACATGTTTATGAGGACAATGAATGGTCAAAAAGATGGAAAACTGGCCAGTGAAAGAAAGAGCGATGGTTCGTTGGCTTCAAATGGACTTTTGGGAGTTTTAAATGAAACAAATGAAACAACTAGAGATGAAGAAGATATGGGAAAAGGATTCAGCATCAATGGCTTAATTGGCTGCATTAAGGAGCTTCCTAGGGAATCCTTATTTGATAAACCTCAGAACTGTGCTATCCTCAACAAGTCTGATGACATCATTAAAAACGGAGGCTCCGTTCCAAAGGTTCCAAGCCTTGCATATTCACATAAACGTGATGCTAAAGGGAAAGAAAGTTCGTCGAGAGGCCATGCCATGGGCAAGGGGACTAACTCTGTCAGTGGGAGTGAAGAACAACCATGTAGGGAAACCCCTCCCCTGACACAGACATATTCCATATCTGAAAGTGACAGGGATGACTTGAAAGTTGCATCTCGAAAAAAGTCAAAACAAACCCGACAGTTCCATCTTCCAACTGGTAAGGAAGGCTTCGAAAGAAAGGTATTGGTGAAATTTTTGCCTAAAAACGTAAAAGAAGGTAGTGTTGTTGATGTTCTTTGTTGCTGTGGGGACATCGTGAAGATACAACTACTTCCCTTAATCGAAGGGAGCAATTTCAGAAATGCTTGGGTTCATTTTAAGACCCAGGAAGGATTACAGAAAGCTCTTGGGAAAACTGACCTCACTGTAAGAAATATCGACATCTTTGTTGAGGCGGCTTCTTCAAGAGATGTGCGTAATAAGGTTACTGTTCCAAAGCTGATTGGTGATCCTAAAGTTCCTACTGCATTGGTAAAGAATCCCACACGAACAGTTGTGATTAAACAGTTGACTGATGATATAAGCTCACATCACCTAAAAGAAGCTCTTGACTTCTGTGGAAGTGCCATATCTGGCGTTTTCTTGGGTTCCTCAAGCTCTGTTGCTTATGTGGAATTTGAGACAGAAGAAGCCAAAGAGATAGCAATTACCGCACATACTATACGAGTTCAAGGAAAGCTTCTACCGATCTATAGAATTGATGTGCCAAGAACAACTGTGGTGAGGATTTCAAATTTCGACGAAACAGTATCACTGACACAAATCCAGCATATATGTAAATCCCACGGGGAGATAAAGCGTGCAAAGGAGAGATCCAAGGGCATTGTGGATGTGCAATTCAAGCTTGGTGAATGGCCTAATATGTGGACCATCCTCAACAGCCTGAACGGAATGAGATTCGAGGGCCACCAGTTGATAGCGCAGCCTGCACCTGTTTTCCCTCCGGAAGTCCTTCAAGCCCTTCGAAGTCAGCCAGACGAAAGAATTCATGTCCAATCTGTTTTACGCAGACTAATCCGCGACGCTGAACTAAATGTTGAAATCACTAACATTGCTACCAAAGTGTATTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

914

Amino Acids

100.46

Weight (kDa)

9.1

Isoelectric Point (pI)

41.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23370 AT3G23370 AT3G23370 AT3G23370
fragaria_vesca	FvH4_4g02261 FvH4_4g03920
malus_domestica	MD16G1220900.v1.1
prunus_persica	Prupe.1G041400_v2.0.a1 Prupe.1G041400_v2.0.a1
pyrus_communis	pycom16g18530
rosa_chinensis	RchiOBHm_Chr1g0364771 RchiOBHm_Chr4g0393941 RchiOBHm_Chr6g0277021
rosa_laevigata	RLG00000009724 RLG00000024329
rosa_multiflora	Rmu_co8066178.1_g000001 Rmu_sc0003401.1_g000010 Rmu_sc0007642.1_g000001 Rmu_sc0007642.1_g000002
rosa_roxburghii	Rroxscaffold_4G00325220 Rroxscaffold_5G00339020 Rroxscaffold_6G00405510 Rroxscaffold_7G00190440
rosa_rugosa	Rorug03G0370000.1 Rorug03G0370100.1 Rorug06G0419300
rosa_samantha	Rh4AG049700 Rh4BG046200 Rh4CG053300 Rh4DG046900
rosa_wichuraiana	Rw4G003940 Rw6G019670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1250
AccB7I	CCANNNNNTGG	1 cut(s)	1660
AccBSI	CCGCTC	2 cut(s)	104, 216
AccII	CGCG	1 cut(s)	2685
AccIII	TCCGGA	3 cut(s)	29, 451, 2608
AclWI	GGATC	6 cut(s)	4, 21, 34, 340, 2108, 2472
AcoI	YGGCCR	1 cut(s)	1356
AcsI	RAATTY	4 cut(s)	1856, 2279, 2398, 2649
AcuI	CTGAAG	2 cut(s)	630, 708
AfaI	GTAC	5 cut(s)	615, 667, 691, 714, 1264
AfeI	AGCGCT	1 cut(s)	177
AfiI	CCNNNNNNNGG	2 cut(s)	1259, 1660
AflII	CTTAAG	1 cut(s)	5
AflIII	ACRYGT	2 cut(s)	883, 1314
AjnI	CCWGG	2 cut(s)	1144, 1989
AloI	GAACNNNNNNTCC	6 cut(s)	912, 944, 1566, 1598, 1624, 1656
Alw26I	GTCTC	3 cut(s)	531, 568, 2279
AlwI	GGATC	6 cut(s)	4, 21, 34, 340, 2108, 2472
AlwNI	CAGNNNCTG	4 cut(s)	281, 986, 1112, 1265
Aor13HI	TCCGGA	3 cut(s)	29, 451, 2608
Aor51HI	AGCGCT	1 cut(s)	177
AoxI	GGCC	7 cut(s)	117, 699, 942, 1356, 1651, 2519, 2569
ApeKI	GCWGC	6 cut(s)	142, 272, 275, 989, 1485, 2587
ApoI	RAATTY	4 cut(s)	1856, 2279, 2398, 2649
Asp700I	GAANNNNTTC	2 cut(s)	2616, 2649
AspA2I	CCTAGG	1 cut(s)	1502
AspLEI	GCGC	2 cut(s)	178, 2587
AspS9I	GGNCC	4 cut(s)	118, 776, 2532, 2569
AsuHPI	GGTGA	6 cut(s)	1160, 1864, 2123, 2189, 2398, 2525
AsuII	TTCGAA	4 cut(s)	517, 995, 1836, 2629
AvaII	GGWCC	2 cut(s)	776, 2532
AvrII	CCTAGG	1 cut(s)	1502
BaeI	ACNNNNGTAYC	2 cut(s)	1254, 1287
BalI	TGGCCA	1 cut(s)	1358
BamHI	GGATCC	1 cut(s)	26
BbvI	GCAGC	6 cut(s)	154, 259, 287, 1001, 1472, 2599
BccI	CCATC	8 cut(s)	109, 189, 902, 1221, 1340, 1370, 1818, 2543
BciT130I	CCWGG	2 cut(s)	1146, 1991
BclI	TGATCA	2 cut(s)	496, 1243
BcoDI	GTCTC	3 cut(s)	531, 568, 2279
BfaI	CTAG	5 cut(s)	759, 1067, 1158, 1434, 1503
BfmI	CTRYAG	5 cut(s)	273, 624, 987, 1257, 2356
BfoI	RGCGCY	1 cut(s)	179
BfrI	CTTAAG	1 cut(s)	5
BfuAI	ACCTGC	1 cut(s)	1250
BisI	GCNGC	9 cut(s)	143, 222, 273, 276, 279, 990, 1486, 2061, 2588
BlnI	CCTAGG	1 cut(s)	1502
BlsI	GCNGC	9 cut(s)	144, 223, 274, 277, 280, 991, 1487, 2062, 2589
Bme1390I	CCNGG	2 cut(s)	1146, 1991
Bme18I	GGWCC	2 cut(s)	776, 2532
BmgT120I	GGNCC	4 cut(s)	118, 776, 2532, 2569
BmiI	GGNNCC	5 cut(s)	28, 241, 1579, 1593, 2254
BmrFI	CCNGG	2 cut(s)	1146, 1991
BplI	GAGNNNNNCTC	4 cut(s)	548, 580, 782, 814
Bpu10I	CCTNAGC	1 cut(s)	696
Bpu14I	TTCGAA	4 cut(s)	517, 995, 1836, 2629
BpuEI	CTTGAG	1 cut(s)	2242
Bsa29I	ATCGAT	1 cut(s)	963
BsaJI	CCNNGG	7 cut(s)	146, 1020, 1502, 1659, 1989, 2449, 2481
BsaWI	WCCGGW	3 cut(s)	29, 451, 2608
BsaXI	ACNNNNNCTCC	6 cut(s)	218, 248, 1562, 1566, 1592, 1596
Bsc4I	CCNNNNNNNGG	2 cut(s)	1259, 1660
Bse1I	ACTGG	5 cut(s)	1120, 1359, 1359, 1825, 2575
Bse3DI	GCAATG	1 cut(s)	2715
BseAI	TCCGGA	3 cut(s)	29, 451, 2608
BseBI	CCWGG	2 cut(s)	1146, 1991
BseCI	ATCGAT	1 cut(s)	963
BseDI	CCNNGG	7 cut(s)	146, 1020, 1502, 1659, 1989, 2449, 2481
BseGI	GGATG	5 cut(s)	346, 1180, 1765, 2500, 2535
BseLI	CCNNNNNNNGG	2 cut(s)	1259, 1660
BseMI	GCAATG	1 cut(s)	2715
BseMII	CTCAG	5 cut(s)	710, 717, 930, 1104, 1541
BseNI	ACTGG	5 cut(s)	1120, 1359, 1359, 1825, 2575
BseXI	GCAGC	6 cut(s)	154, 259, 287, 1001, 1472, 2599
BseYI	CCCAGC	1 cut(s)	382
BsgI	GTGCAG	1 cut(s)	2577
Bsh1236I	CGCG	1 cut(s)	2685
BshFI	GGCC	7 cut(s)	119, 701, 944, 1358, 1653, 2521, 2571
BshVI	ATCGAT	1 cut(s)	963
BsiSI	CCGG	3 cut(s)	30, 452, 2609
BslFI	GGGAC	3 cut(s)	375, 1684, 1928
BslI	CCNNNNNNNGG	2 cut(s)	1259, 1660
BsmAI	GTCTC	3 cut(s)	531, 568, 2279
BsmFI	GGGAC	3 cut(s)	375, 1684, 1928
BsmI	GAATGC	3 cut(s)	384, 525, 602
BsnI	GGCC	7 cut(s)	119, 701, 944, 1358, 1653, 2521, 2571
Bsp119I	TTCGAA	4 cut(s)	517, 995, 1836, 2629
Bsp13I	TCCGGA	3 cut(s)	29, 451, 2608
Bsp143I	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
Bsp19I	CCATGG	2 cut(s)	146, 1659
BspANI	GGCC	7 cut(s)	119, 701, 944, 1358, 1653, 2521, 2571
BspCNI	CTCAG	5 cut(s)	709, 716, 931, 1105, 1540
BspDI	ATCGAT	1 cut(s)	963
BspEI	TCCGGA	3 cut(s)	29, 451, 2608
BspFNI	CGCG	1 cut(s)	2685
BspLI	GGNNCC	5 cut(s)	28, 241, 1579, 1593, 2254
BspMAI	CTGCAG	3 cut(s)	277, 991, 1261
BspMI	ACCTGC	1 cut(s)	1250
BspPI	GGATC	6 cut(s)	4, 21, 34, 340, 2108, 2472
BspQI	GCTCTTC	2 cut(s)	262, 607
BspT104I	TTCGAA	4 cut(s)	517, 995, 1836, 2629
BspTI	CTTAAG	1 cut(s)	5
BsrBI	CCGCTC	2 cut(s)	104, 216
BsrDI	GCAATG	1 cut(s)	2715
BsrI	ACTGG	5 cut(s)	1120, 1359, 1359, 1825, 2575
BssECI	CCNNGG	7 cut(s)	146, 1020, 1502, 1659, 1989, 2449, 2481
BssMI	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
BssT1I	CCWWGG	5 cut(s)	146, 1020, 1502, 1659, 2481
Bst2UI	CCWGG	2 cut(s)	1146, 1991
Bst6I	CTCTTC	2 cut(s)	262, 607
BstAFI	CTTAAG	1 cut(s)	5
BstBI	TTCGAA	4 cut(s)	517, 995, 1836, 2629
BstC8I	GCNNGC	5 cut(s)	771, 916, 1284, 2466, 2592
BstDEI	CTNAG	6 cut(s)	575, 696, 703, 939, 1113, 1527
BstDSI	CCRYGG	3 cut(s)	146, 1659, 2449
BstENI	CCTNNNNNAGG	1 cut(s)	1257
BstF5I	GGATG	5 cut(s)	346, 1180, 1765, 2500, 2535
BstFNI	CGCG	1 cut(s)	2685
BstH2I	RGCGCY	1 cut(s)	179
BstHHI	GCGC	2 cut(s)	178, 2587
BstKTI	GATC	8 cut(s)	12, 29, 335, 499, 1246, 2116, 2355, 2480
BstMAI	GTCTC	3 cut(s)	531, 568, 2279
BstMBI	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
BstMWI	GCNNNNNNNGC	8 cut(s)	116, 148, 278, 1473, 1482, 2315, 2506, 2591
BstNI	CCWGG	2 cut(s)	1146, 1991
BstNSI	RCATGY	3 cut(s)	773, 887, 1318
BstSCI	CCNGG	2 cut(s)	1144, 1989
BstSFI	CTRYAG	5 cut(s)	273, 624, 987, 1257, 2356
BstUI	CGCG	1 cut(s)	2685
BstV1I	GCAGC	6 cut(s)	154, 259, 287, 1001, 1472, 2599
BstX2I	RGATCY	4 cut(s)	9, 26, 332, 2477
BstXI	CCANNNNNNTGG	1 cut(s)	1027
BstYI	RGATCY	4 cut(s)	9, 26, 332, 2477
Bsu15I	ATCGAT	1 cut(s)	963
BsuRI	GGCC	7 cut(s)	119, 701, 944, 1358, 1653, 2521, 2571
BsuTUI	ATCGAT	1 cut(s)	963
BtgI	CCRYGG	3 cut(s)	146, 1659, 2449
BtgZI	GCGATG	1 cut(s)	1389
BtsCI	GGATG	5 cut(s)	346, 1180, 1765, 2500, 2535
BtsI	GCAGTG	1 cut(s)	486
BtsIMutI	CAGTG	5 cut(s)	486, 1366, 1690, 2028, 2417
BveI	ACCTGC	1 cut(s)	1250
Cac8I	GCNNGC	5 cut(s)	771, 916, 1284, 2466, 2592
CaiI	CAGNNNCTG	4 cut(s)	281, 986, 1112, 1265
CfoI	GCGC	2 cut(s)	178, 2587
Cfr13I	GGNCC	4 cut(s)	118, 776, 2532, 2569
ClaI	ATCGAT	1 cut(s)	963
CseI	GACGC	1 cut(s)	2696
CsiI	ACCWGGT	1 cut(s)	1144
Csp6I	GTAC	5 cut(s)	614, 666, 690, 713, 1263
CviQI	GTAC	5 cut(s)	614, 666, 690, 713, 1263
DdeI	CTNAG	6 cut(s)	575, 696, 703, 939, 1113, 1527
DpnI	GATC	8 cut(s)	11, 28, 334, 498, 1245, 2115, 2354, 2479
DpnII	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
DraI	TTTAAA	1 cut(s)	1413
EaeI	YGGCCR	1 cut(s)	1356
Eam1104I	CTCTTC	2 cut(s)	262, 607
EarI	CTCTTC	2 cut(s)	262, 607
EciI	GGCGGA	1 cut(s)	239
Eco130I	CCWWGG	5 cut(s)	146, 1020, 1502, 1659, 2481
Eco147I	AGGCCT	2 cut(s)	701, 944
Eco47I	GGWCC	2 cut(s)	776, 2532
Eco47III	AGCGCT	1 cut(s)	177
Eco57I	CTGAAG	2 cut(s)	630, 708
EcoNI	CCTNNNNNAGG	1 cut(s)	1257
EcoRI	GAATTC	1 cut(s)	2649
EcoRII	CCWGG	2 cut(s)	1144, 1989
EcoT14I	CCWWGG	5 cut(s)	146, 1020, 1502, 1659, 2481
EcoT22I	ATGCAT	1 cut(s)	318
ErhI	CCWWGG	5 cut(s)	146, 1020, 1502, 1659, 2481
FalI	AAGNNNNNCTT	6 cut(s)	1817, 1849, 2196, 2228, 2328, 2360
FaqI	GGGAC	3 cut(s)	375, 1684, 1928
FbaI	TGATCA	2 cut(s)	496, 1243
Fnu4HI	GCNGC	9 cut(s)	143, 222, 273, 276, 279, 990, 1486, 2061, 2588
FokI	GGATG	5 cut(s)	353, 1187, 1772, 2507, 2522
Fsp4HI	GCNGC	9 cut(s)	143, 222, 273, 276, 279, 990, 1486, 2061, 2588
FspBI	CTAG	5 cut(s)	759, 1067, 1158, 1434, 1503
GlaI	GCGC	2 cut(s)	177, 2586
GluI	GCNGC	9 cut(s)	143, 222, 273, 276, 279, 990, 1486, 2061, 2588
GsaI	CCCAGC	1 cut(s)	386
HaeII	RGCGCY	1 cut(s)	179
HaeIII	GGCC	7 cut(s)	119, 701, 944, 1358, 1653, 2521, 2571
HapII	CCGG	3 cut(s)	30, 452, 2609
HgaI	GACGC	1 cut(s)	2696
HhaI	GCGC	2 cut(s)	178, 2587
Hin6I	GCGC	2 cut(s)	176, 2585
HinP1I	GCGC	2 cut(s)	176, 2585
HincII	GTYRAC	1 cut(s)	2175
HindII	GTYRAC	1 cut(s)	2175
HindIII	AAGCTT	2 cut(s)	2342, 2507
HpaII	CCGG	3 cut(s)	30, 452, 2609
HphI	GGTGA	6 cut(s)	1160, 1864, 2123, 2189, 2398, 2525
Hpy166II	GTNNAC	4 cut(s)	479, 713, 2175, 2532
Hpy8I	GTNNAC	4 cut(s)	479, 713, 2175, 2532
Hpy99I	CGWCG	5 cut(s)	214, 238, 1648, 2408, 2690
HpyCH4IV	ACGT	3 cut(s)	1219, 1618, 1872
HpyF10VI	GCNNNNNNNGC	8 cut(s)	116, 148, 278, 1473, 1482, 2315, 2506, 2591
HpyF3I	CTNAG	6 cut(s)	575, 696, 703, 939, 1113, 1527
HpySE526I	ACGT	3 cut(s)	1219, 1618, 1872
HspAI	GCGC	2 cut(s)	176, 2585
Kpn2I	TCCGGA	3 cut(s)	29, 451, 2608
Ksp22I	TGATCA	2 cut(s)	496, 1243
Kzo9I	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
LguI	GCTCTTC	2 cut(s)	262, 607
LmnI	GCTCC	5 cut(s)	262, 766, 1495, 1583, 1953
Lsp1109I	GCAGC	6 cut(s)	154, 259, 287, 1001, 1472, 2599
MabI	ACCWGGT	1 cut(s)	1144
MaeI	CTAG	5 cut(s)	759, 1067, 1158, 1434, 1503
MaeII	ACGT	3 cut(s)	1219, 1618, 1872
MaeIII	GTNAC	4 cut(s)	976, 1140, 1751, 2089
MalI	GATC	8 cut(s)	11, 28, 334, 498, 1245, 2115, 2354, 2479
MbiI	CCGCTC	2 cut(s)	104, 216
MboI	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
MfeI	CAATTG	2 cut(s)	423, 505
MflI	RGATCY	4 cut(s)	9, 26, 332, 2477
MlsI	TGGCCA	1 cut(s)	1358
MluNI	TGGCCA	1 cut(s)	1358
MlyI	GAGTC	5 cut(s)	123, 422, 533, 580, 648
MmeI	TCCRAC	3 cut(s)	1062, 1180, 1841
Mox20I	TGGCCA	1 cut(s)	1358
Mph1103I	ATGCAT	1 cut(s)	318
MroI	TCCGGA	3 cut(s)	29, 451, 2608
MroXI	GAANNNNTTC	2 cut(s)	2616, 2649
MscI	TGGCCA	1 cut(s)	1358
MslI	CAYNNNNRTG	3 cut(s)	1218, 1319, 1617
Msp20I	TGGCCA	1 cut(s)	1358
MspA1I	CMGCKG	1 cut(s)	278
MspCI	CTTAAG	1 cut(s)	5
MspI	CCGG	3 cut(s)	30, 452, 2609
MspR9I	CCNGG	2 cut(s)	1146, 1991
MunI	CAATTG	2 cut(s)	423, 505
Mva1269I	GAATGC	3 cut(s)	384, 525, 602
MvaI	CCWGG	2 cut(s)	1146, 1991
MvnI	CGCG	1 cut(s)	2685
MwoI	GCNNNNNNNGC	8 cut(s)	116, 148, 278, 1473, 1482, 2315, 2506, 2591
NcoI	CCATGG	2 cut(s)	146, 1659
NdeII	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
NlaIV	GGNNCC	5 cut(s)	28, 241, 1579, 1593, 2254
NmuCI	GTSAC	1 cut(s)	1751
NsiI	ATGCAT	1 cut(s)	318
NspI	RCATGY	3 cut(s)	773, 887, 1318
NspV	TTCGAA	4 cut(s)	517, 995, 1836, 2629
PaeI	GCATGC	1 cut(s)	773
PceI	AGGCCT	2 cut(s)	701, 944
PciI	ACATGT	2 cut(s)	883, 1314
PciSI	GCTCTTC	2 cut(s)	262, 607
PcsI	WCGNNNNNNNCGW	1 cut(s)	1578
PctI	GAATGC	3 cut(s)	384, 525, 602
PdmI	GAANNNNTTC	2 cut(s)	2616, 2649
PfeI	GAWTC	9 cut(s)	35, 833, 953, 1154, 1188, 1461, 1508, 2143, 2562
PflMI	CCANNNNNTGG	1 cut(s)	1660
PkrI	GCNGC	9 cut(s)	144, 223, 274, 277, 280, 991, 1487, 2062, 2589
PleI	GAGTC	5 cut(s)	123, 422, 533, 579, 647
PpsI	GAGTC	5 cut(s)	123, 422, 533, 579, 647
PscI	ACATGT	2 cut(s)	883, 1314
Psp6I	CCWGG	2 cut(s)	1144, 1989
PspFI	CCCAGC	1 cut(s)	382
PspGI	CCWGG	2 cut(s)	1144, 1989
PspN4I	GGNNCC	5 cut(s)	28, 241, 1579, 1593, 2254
PspPI	GGNCC	4 cut(s)	118, 776, 2532, 2569
PstI	CTGCAG	3 cut(s)	277, 991, 1261
PstNI	CAGNNNCTG	4 cut(s)	281, 986, 1112, 1265
PsuI	RGATCY	4 cut(s)	9, 26, 332, 2477
RsaI	GTAC	5 cut(s)	615, 667, 691, 714, 1264
RsaNI	GTAC	5 cut(s)	614, 666, 690, 713, 1263
RseI	CAYNNNNRTG	3 cut(s)	1218, 1319, 1617
SapI	GCTCTTC	2 cut(s)	262, 607
SatI	GCNGC	9 cut(s)	143, 222, 273, 276, 279, 990, 1486, 2061, 2588
Sau3AI	GATC	8 cut(s)	9, 26, 332, 496, 1243, 2113, 2352, 2477
Sau96I	GGNCC	4 cut(s)	118, 776, 2532, 2569
SchI	GAGTC	5 cut(s)	123, 422, 533, 580, 648
ScrFI	CCNGG	2 cut(s)	1146, 1991
SexAI	ACCWGGT	1 cut(s)	1144
SfcI	CTRYAG	5 cut(s)	273, 624, 987, 1257, 2356
SfuI	TTCGAA	4 cut(s)	517, 995, 1836, 2629
SinI	GGWCC	2 cut(s)	776, 2532
SmiMI	CAYNNNNRTG	3 cut(s)	1218, 1319, 1617
SmlI	CTYRAG	2 cut(s)	5, 2257
SmoI	CTYRAG	2 cut(s)	5, 2257
SphI	GCATGC	1 cut(s)	773
SseBI	AGGCCT	2 cut(s)	701, 944
SspI	AATATT	1 cut(s)	1239
SspMI	CTAG	5 cut(s)	759, 1067, 1158, 1434, 1503
StuI	AGGCCT	2 cut(s)	701, 944
StyD4I	CCNGG	2 cut(s)	1144, 1989
StyI	CCWWGG	5 cut(s)	146, 1020, 1502, 1659, 2481
TaiI	ACGT	3 cut(s)	1222, 1621, 1875
TatI	WGTACW	2 cut(s)	613, 712
TauI	GCSGC	3 cut(s)	224, 281, 2063
TfiI	GAWTC	9 cut(s)	35, 833, 953, 1154, 1188, 1461, 1508, 2143, 2562
TscAI	CASTG	5 cut(s)	493, 1366, 1690, 2035, 2424
TseFI	GTSAC	1 cut(s)	1751
TseI	GCWGC	6 cut(s)	142, 272, 275, 989, 1485, 2587
Tsp45I	GTSAC	1 cut(s)	1751
TspDTI	ATGAA	9 cut(s)	34, 937, 981, 1346, 1431, 1440, 1455, 1967, 2642
TspGWI	ACGGA	4 cut(s)	1021, 1570, 1587, 2568
TspRI	CASTG	5 cut(s)	493, 1366, 1690, 2035, 2424
Van91I	CCANNNNNTGG	1 cut(s)	1660
Vha464I	CTTAAG	1 cut(s)	5
VpaK11BI	GGWCC	2 cut(s)	776, 2532
XagI	CCTNNNNNAGG	1 cut(s)	1257
XapI	RAATTY	4 cut(s)	1856, 2279, 2398, 2649
XceI	RCATGY	3 cut(s)	773, 887, 1318
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1817, 2488
XmaJI	CCTAGG	1 cut(s)	1502
XmnI	GAANNNNTTC	2 cut(s)	2616, 2649
XspI	CTAG	5 cut(s)	759, 1067, 1158, 1434, 1503
Zsp2I	ATGCAT	1 cut(s)	318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.