Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0004450

Physical Location & Seq

Genomic Coordinates Forward (+)

7319164 .. 7323291

Gene Structure 4128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00339020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGACCCTCAATCGTCTCCTTCTTCTTCCAAAGCCGCCGCCCATTCATTTCCACAAACTTGGGCTTCCCAAATCAACAAGATGGTGTTCTTCTTCGCCAAGCAGTGGTGCCCAGAAACCACCCAACTTGGAGGAGCAAAGAGCTGTAGCCACCGTGGAGGAGTCGGATAACAAATATGTGGAGAGGCATTCAGGGACCTTTCTAAATCCAACCAACTTTGAAAACGAAGTGGGGGAATCGTGGCTTACTCTGAGAGGCATTTTTACTAATCTAAAAGCAAATATGATTGGAACTCCCCAATCTCAGAAGGAAAACACTGTCGAGATAATTGATTCTACTGCTGATAAGACAGTTTCTGAGGTTATTAAGACAGAGGATAGTCCACAAGACTCTGAAATTGGCCAGCCCAATCATAGTATGCTAATGCCAAAAGTCATAAGAGACTCTCAGAGTTGCAAGCAGAATATCTCAACAGGTTTAAGATCTGACATAGTCAGGGGGAACTCTTCATCTGATGTGCTTGATGCTACAGCCTCTGACGAAGTCAAGGTGCCTAAATCATTAGGTAGCACTGGACCTGGTGAGGCTAAAAATACAATTCACTCAGCAGATTTAGTTTTTTCTCCACAGAATATGGTCACAGTGACTGTTTCTGAAGTTAGGACAGAGAGTGTTAGTGAAAATGAATTAACAAGTGATCTGTTGCAAATAATGCGGAGAAGTTCTTTGGGGAATTCAGCAGGTCAGGTTGCATCTAATGGTAAAAGGCTGCATGGTGGTCATAAAGATGTTGAACATGAAACTGCAGCTTCCAATGTAATATGGAAAAGATCTTCCAAGGATATTGGTCAATCAGGAGTCAAGACTGAGTCACATAGGCAACTTGAGGTGGGCGTGTTTGGATCTGATTTTGATTGTCTGTCTTCCTTAACACATAAGTTACCAGGTGAACCTTCTAGGATACTGCAAAAGGATATTGGAAATGCATCTACTGTAGTTGGAAATGTAAACCCTCAACCTGGCAAAAGAACGATATTTGATCAACCACCTACTGCAGGTTCTGACATGGGTAAAATTCCTTCATCGTCTAGTGGCCCCCAGCAAGTGAGGGGGTTAGCAAAGATGTTTATGAAGACAATGAATGGTCAAAAATCTGATGTAATTACCAGTAAGAAGAGCGATACTTTGGCTTCGAATGTAGTTTTGGAACTTTTAAATGAAACAAATGATAAAACAGGTAAAGAAGATACAGGAAATAGATTTGACATCAATGGGTTGATTGGGTGCATCAAAGAGCTGCCAAGAGAATCATCAACCATTACATCTCAGAATTGTAGCACTCCCAACAATACTGGTCTCCTCATAAAAAAGGTAGGGTCAGTTAAAAAGGTTCGAAGCCACGCAAATGTGCAACAGAGTGATGCAAAAAGAAAAGAGAGTTCGCTGAGAGTTCATGCCATGGGAAAGGAAACTAGTAAGGAAGACTTAAATAAGATCCCAGGTACTTCCTGCCAAAAAGAAGAATCTACAGAAAGCAAGGTGTTGGTTAGATTTTTGCACAAACGTGTAGAGGAAAGTGCTATATCTAAAGCCTTTGACGATTGTGGGTCTATCAGGAAGATACAACTACTTCCCTTAATTGAAGGAAGCAATTTTAGAGATGGTTACGTGCATTTTAAGACTAGGGAAGGATCGCATAAAGCTCTCAGGAAAAGCGAGTTGGTTATAGAGGGTGCTCATGTTGTTGTGGATGCGACTTCTTTAGAAGATGTGCCTAATAAAATTTCCATTCCCAACCTGATTGGTGATCCTGAAGTTCCTCTCATGTTAGTAAAGAACCCAACACGAACAGTTATGATCAAACAGTTGACCCATGATATAAGCTCACATCAGCTAAAAGAAGCTCTTGCCTTCTGTGGAAGTGGCATATCCAGCATTTTCTTGGGTTCATCAAGCTCTGTTGCTTATGTGGAATTTGAGACAGAAGATGCCAAAGAGAGAGCAATTGCAGCATATTCCATAAATGTTCAAGAAAAACAGCTATTGATCTTCAGAATTGATGTGCCAAGAACAACAGTGATAAGGATAACCAATATTGATGATACAGCATTTTCTAGTAAACTGGTGCCCGGGAAAATCACATCAATTTGTAGTTCTTATGGGGAGCTGTACAAACAAAAGCTGAGAGGCAAGGCTATTTTGGATGTGTATTTCAAGCTTGCTGAATGGCCAAATATTTTGAGTATTCTCAACAGGTTAAATGGAATGGAAGTAGATGGCGAACGATTGATTGCTCAACCTGCTCCTATTTTTCCTCCGCCGATCCTTCAAGTTCTTTGGAGTAAGCCAGATGAAAGAATTCATGTCAAATCTGTTTTGCAAAGATTGTTGCAGACCAGTGAACTACCTGTTGAACTCAGTAATATTGTTACGAAATACCACGGTGATAAATATTTTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

820

Amino Acids

89.95

Weight (kDa)

8.33

Isoelectric Point (pI)

45.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23370 AT3G23370 AT3G23370 AT3G23370
fragaria_vesca	FvH4_4g02261 FvH4_4g03920
malus_domestica	MD16G1220900.v1.1
prunus_persica	Prupe.1G041400_v2.0.a1 Prupe.1G041400_v2.0.a1
pyrus_communis	pycom16g18530
rosa_chinensis	RchiOBHm_Chr1g0364771 RchiOBHm_Chr4g0393941 RchiOBHm_Chr6g0277021
rosa_laevigata	RLG00000009724 RLG00000024329
rosa_multiflora	Rmu_co8066178.1_g000001 Rmu_sc0003401.1_g000010 Rmu_sc0007642.1_g000001 Rmu_sc0007642.1_g000002
rosa_roxburghii	Rroxscaffold_4G00325220 Rroxscaffold_5G00339020 Rroxscaffold_6G00405510 Rroxscaffold_7G00190440
rosa_rugosa	Rorug03G0370000.1 Rorug03G0370100.1 Rorug06G0419300
rosa_samantha	Rh4AG049700 Rh4BG046200 Rh4CG053300 Rh4DG046900
rosa_wichuraiana	Rw4G003940 Rw6G019670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	731, 1046, 2308
AccB1I	GGYRCC	3 cut(s)	107, 550, 2125
AccB7I	CCANNNNNTGG	1 cut(s)	104
AciI	CCGC	4 cut(s)	35, 38, 715, 2318
AclWI	GGATC	5 cut(s)	910, 1489, 1699, 1802, 2317
AcoI	YGGCCR	2 cut(s)	400, 2228
AcsI	RAATTY	5 cut(s)	733, 1074, 1782, 1973, 2358
AcuI	CTGAAG	3 cut(s)	675, 1833, 2035
AfaI	GTAC	2 cut(s)	1504, 2171
AfiI	CCNNNNNNNGG	3 cut(s)	104, 1019, 1055
AflIII	ACRYGT	1 cut(s)	1564
AgsI	TTSAA	8 cut(s)	221, 794, 1643, 2030, 2215, 2330, 2414, 2459
AhlI	ACTAGT	1 cut(s)	1472
AjnI	CCWGG	4 cut(s)	577, 943, 1018, 1498
AjuI	GAANNNNNNNTTGG	4 cut(s)	1187, 1219, 1703, 1735
AleI	CACNNNNGTG	1 cut(s)	1563
Alw21I	GWGCWC	1 cut(s)	1738
Alw26I	GTCTC	4 cut(s)	20, 435, 1361, 1973
AlwI	GGATC	5 cut(s)	910, 1489, 1699, 1802, 2317
AlwNI	CAGNNNCTG	4 cut(s)	356, 536, 647, 1061
Ama87I	CYCGRG	1 cut(s)	2129
AoxI	GGCC	3 cut(s)	400, 1093, 2228
ApeKI	GCWGC	4 cut(s)	769, 806, 1297, 2009
ApoI	RAATTY	5 cut(s)	733, 1074, 1782, 1973, 2358
Asp700I	GAANNNNTTC	1 cut(s)	2358
AspS9I	GGNCC	3 cut(s)	195, 575, 1094
AsuC2I	CCSGG	2 cut(s)	2130, 2131
AsuHPI	GGTGA	4 cut(s)	593, 959, 1817, 2456
AsuII	TTCGAA	2 cut(s)	1193, 1393
AvaI	CYCGRG	1 cut(s)	2129
AvaII	GGWCC	2 cut(s)	195, 575
BaeGI	GKGCMC	2 cut(s)	112, 2130
BalI	TGGCCA	2 cut(s)	402, 2230
BanI	GGYRCC	3 cut(s)	107, 550, 2125
BarI	GAAGNNNNNNTAC	2 cut(s)	1063, 1095
BbsI	GAAGAC	3 cut(s)	915, 1139, 1488
Bbv12I	GWGCWC	1 cut(s)	1738
BbvI	GCAGC	4 cut(s)	756, 818, 1284, 2021
BccI	CCATC	3 cut(s)	75, 1655, 2270
BciT130I	CCWGG	4 cut(s)	579, 945, 1020, 1500
BciVI	GTATCC	1 cut(s)	954
BclI	TGATCA	2 cut(s)	1039, 1857
BcnI	CCSGG	2 cut(s)	2130, 2131
BcoDI	GTCTC	4 cut(s)	20, 435, 1361, 1973
BcuI	ACTAGT	1 cut(s)	1472
BfaI	CTAG	5 cut(s)	957, 1089, 1473, 1683, 2115
BfmI	CTRYAG	6 cut(s)	144, 528, 804, 993, 1053, 1527
BfuAI	ACCTGC	3 cut(s)	731, 1046, 2308
BfuI	GTATCC	1 cut(s)	954
BglII	AGATCT	2 cut(s)	482, 830
BisI	GCNGC	6 cut(s)	35, 38, 770, 807, 1298, 2010
BlsI	GCNGC	6 cut(s)	36, 39, 771, 808, 1299, 2011
Bme1390I	CCNGG	6 cut(s)	579, 945, 1020, 1500, 2130, 2131
Bme18I	GGWCC	2 cut(s)	195, 575
BmeT110I	CYCGRG	1 cut(s)	2129
BmgT120I	GGNCC	3 cut(s)	195, 575, 1094
BmiI	GGNNCC	5 cut(s)	109, 196, 552, 1096, 2127
BmrFI	CCNGG	6 cut(s)	579, 945, 1020, 1500, 2130, 2131
BmsI	GCATC	7 cut(s)	514, 761, 995, 1296, 1411, 1741, 1978
BpiI	GAAGAC	3 cut(s)	915, 1139, 1488
Bpu14I	TTCGAA	2 cut(s)	1193, 1393
BpuEI	CTTGAG	1 cut(s)	905
BpuMI	CCSGG	2 cut(s)	2130, 2131
BsaAI	YACGTR	1 cut(s)	1669
BsaI	GGTCTC	1 cut(s)	1361
BsaJI	CCNNGG	6 cut(s)	153, 837, 1458, 1498, 2129, 2440
Bsc4I	CCNNNNNNNGG	3 cut(s)	104, 1019, 1055
Bse1I	ACTGG	5 cut(s)	577, 1167, 1357, 2127, 2397
BseBI	CCWGG	4 cut(s)	579, 945, 1020, 1500
BseDI	CCNNGG	6 cut(s)	153, 837, 1458, 1498, 2129, 2440
BseGI	GGATG	2 cut(s)	1756, 2209
BseLI	CCNNNNNNNGG	3 cut(s)	104, 1019, 1055
BseNI	ACTGG	5 cut(s)	577, 1167, 1357, 2127, 2397
BseRI	GAGGAG	3 cut(s)	146, 173, 1349
BseSI	GKGCMC	2 cut(s)	112, 2130
BseXI	GCAGC	4 cut(s)	756, 818, 1284, 2021
BseYI	CCCAGC	1 cut(s)	1098
BshFI	GGCC	3 cut(s)	402, 1095, 2230
BshNI	GGYRCC	3 cut(s)	107, 550, 2125
BsiHKAI	GWGCWC	1 cut(s)	1738
BsiHKCI	CYCGRG	1 cut(s)	2129
BsiSI	CCGG	1 cut(s)	2130
BslFI	GGGAC	1 cut(s)	208
BslI	CCNNNNNNNGG	3 cut(s)	104, 1019, 1055
BsmAI	GTCTC	4 cut(s)	20, 435, 1361, 1973
BsmBI	CGTCTC	1 cut(s)	20
BsmFI	GGGAC	1 cut(s)	208
BsmI	GAATGC	1 cut(s)	187
BsnI	GGCC	3 cut(s)	402, 1095, 2230
Bso31I	GGTCTC	1 cut(s)	1361
BsoBI	CYCGRG	1 cut(s)	2129
Bsp119I	TTCGAA	2 cut(s)	1193, 1393
Bsp1286I	GDGCHC	3 cut(s)	112, 1738, 2130
Bsp1407I	TGTACA	1 cut(s)	2169
Bsp19I	CCATGG	1 cut(s)	1458
BspACI	CCGC	4 cut(s)	35, 38, 715, 2318
BspANI	GGCC	3 cut(s)	402, 1095, 2230
BspLI	GGNNCC	5 cut(s)	109, 196, 552, 1096, 2127
BspMAI	CTGCAG	2 cut(s)	808, 1057
BspMI	ACCTGC	3 cut(s)	731, 1046, 2308
BspPI	GGATC	5 cut(s)	910, 1489, 1699, 1802, 2317
BspQI	GCTCTTC	1 cut(s)	1169
BspT104I	TTCGAA	2 cut(s)	1193, 1393
BspT107I	GGYRCC	3 cut(s)	107, 550, 2125
BspTNI	GGTCTC	1 cut(s)	1361
BsrGI	TGTACA	1 cut(s)	2169
BsrI	ACTGG	5 cut(s)	577, 1167, 1357, 2127, 2397
BssECI	CCNNGG	6 cut(s)	153, 837, 1458, 1498, 2129, 2440
BssT1I	CCWWGG	2 cut(s)	837, 1458
Bst2UI	CCWGG	4 cut(s)	579, 945, 1020, 1500
Bst6I	CTCTTC	2 cut(s)	511, 1169
BstAPI	GCANNNNNTGC	1 cut(s)	712
BstAUI	TGTACA	1 cut(s)	2169
BstBAI	YACGTR	1 cut(s)	1669
BstBI	TTCGAA	2 cut(s)	1193, 1393
BstC8I	GCNNGC	3 cut(s)	404, 458, 2220
BstDSI	CCRYGG	3 cut(s)	153, 1458, 2440
BstENI	CCTNNNNNAGG	1 cut(s)	1053
BstF5I	GGATG	2 cut(s)	1756, 2209
BstMAI	GTCTC	4 cut(s)	20, 435, 1361, 1973
BstMWI	GCNNNNNNNGC	4 cut(s)	712, 1932, 2009, 2300
BstNI	CCWGG	4 cut(s)	579, 945, 1020, 1500
BstSCI	CCNGG	6 cut(s)	577, 943, 1018, 1498, 2128, 2129
BstSFI	CTRYAG	6 cut(s)	144, 528, 804, 993, 1053, 1527
BstSLI	GKGCMC	2 cut(s)	112, 2130
BstV1I	GCAGC	4 cut(s)	756, 818, 1284, 2021
BstV2I	GAAGAC	3 cut(s)	915, 1139, 1488
BstX2I	RGATCY	4 cut(s)	482, 830, 902, 1494
BstXI	CCANNNNNNTGG	1 cut(s)	59
BstYI	RGATCY	4 cut(s)	482, 830, 902, 1494
BsuI	GTATCC	1 cut(s)	954
BsuRI	GGCC	3 cut(s)	402, 1095, 2230
BtgI	CCRYGG	3 cut(s)	153, 1458, 2440
BtsCI	GGATG	2 cut(s)	1756, 2209
BtsI	GCAGTG	1 cut(s)	109
BtsIMutI	CAGTG	6 cut(s)	109, 315, 570, 648, 2082, 2404
BveI	ACCTGC	3 cut(s)	731, 1046, 2308
Cac8I	GCNNGC	3 cut(s)	404, 458, 2220
CaiI	CAGNNNCTG	4 cut(s)	356, 536, 647, 1061
Cfr13I	GGNCC	3 cut(s)	195, 575, 1094
Cfr9I	CCCGGG	1 cut(s)	2129
CsiI	ACCWGGT	2 cut(s)	577, 943
Csp6I	GTAC	2 cut(s)	1503, 2170
CspCI	CAANNNNNGTGG	2 cut(s)	108, 143
CviAII	CATG	9 cut(s)	773, 797, 1066, 1454, 1459, 1739, 1825, 1874, 2363
CviQI	GTAC	2 cut(s)	1503, 2170
DraI	TTTAAA	1 cut(s)	1215
EaeI	YGGCCR	2 cut(s)	400, 2228
Eam1104I	CTCTTC	2 cut(s)	511, 1169
EarI	CTCTTC	2 cut(s)	511, 1169
EciI	GGCGGA	1 cut(s)	2307
Eco130I	CCWWGG	2 cut(s)	837, 1458
Eco31I	GGTCTC	1 cut(s)	1361
Eco47I	GGWCC	2 cut(s)	195, 575
Eco57I	CTGAAG	3 cut(s)	675, 1833, 2035
Eco88I	CYCGRG	1 cut(s)	2129
EcoNI	CCTNNNNNAGG	1 cut(s)	1053
EcoO109I	RGGNCCY	1 cut(s)	195
EcoRI	GAATTC	2 cut(s)	733, 2358
EcoRII	CCWGG	4 cut(s)	577, 943, 1018, 1498
EcoT14I	CCWWGG	2 cut(s)	837, 1458
EcoT22I	ATGCAT	1 cut(s)	988
ErhI	CCWWGG	2 cut(s)	837, 1458
Esp3I	CGTCTC	1 cut(s)	20
FaeI	CATG	9 cut(s)	776, 800, 1069, 1457, 1462, 1742, 1828, 1877, 2366
FalI	AAGNNNNNCTT	4 cut(s)	1469, 1501, 1890, 1922
FaqI	GGGAC	1 cut(s)	208
FatI	CATG	9 cut(s)	772, 796, 1065, 1453, 1458, 1738, 1824, 1873, 2362
FbaI	TGATCA	2 cut(s)	1039, 1857
Fnu4HI	GCNGC	6 cut(s)	35, 38, 770, 807, 1298, 2010
FokI	GGATG	2 cut(s)	1763, 2216
Fsp4HI	GCNGC	6 cut(s)	35, 38, 770, 807, 1298, 2010
FspBI	CTAG	5 cut(s)	957, 1089, 1473, 1683, 2115
GluI	GCNGC	6 cut(s)	35, 38, 770, 807, 1298, 2010
GsaI	CCCAGC	1 cut(s)	1102
HaeIII	GGCC	3 cut(s)	402, 1095, 2230
HapII	CCGG	1 cut(s)	2130
Hin1II	CATG	9 cut(s)	776, 800, 1069, 1457, 1462, 1742, 1828, 1877, 2366
HincII	GTYRAC	1 cut(s)	1869
HindII	GTYRAC	1 cut(s)	1869
HindIII	AAGCTT	1 cut(s)	2216
HinfI	GANTC	9 cut(s)	161, 236, 332, 389, 443, 858, 869, 1307, 1523
HpaII	CCGG	1 cut(s)	2130
HphI	GGTGA	4 cut(s)	593, 959, 1817, 2456
Hpy166II	GTNNAC	6 cut(s)	383, 950, 1009, 1869, 2120, 2402
Hpy188III	TCNNGA	7 cut(s)	322, 855, 862, 1615, 1708, 1811, 2030
Hpy8I	GTNNAC	6 cut(s)	383, 950, 1009, 1869, 2120, 2402
HpyAV	CCTTC	8 cut(s)	29, 301, 963, 1089, 1637, 1682, 1921, 2336
HpyCH4IV	ACGT	2 cut(s)	1564, 1668
HpyF10VI	GCNNNNNNNGC	4 cut(s)	712, 1932, 2009, 2300
HpySE526I	ACGT	2 cut(s)	1564, 1668
Hsp92II	CATG	9 cut(s)	776, 800, 1069, 1457, 1462, 1742, 1828, 1877, 2366
Ksp22I	TGATCA	2 cut(s)	1039, 1857
LguI	GCTCTTC	1 cut(s)	1169
LmnI	GCTCC	3 cut(s)	133, 2164, 2308
Lsp1109I	GCAGC	4 cut(s)	756, 818, 1284, 2021
LweI	GCATC	7 cut(s)	514, 761, 995, 1296, 1411, 1741, 1978
MabI	ACCWGGT	2 cut(s)	577, 943
MaeI	CTAG	5 cut(s)	957, 1089, 1473, 1683, 2115
MaeII	ACGT	2 cut(s)	1564, 1668
MaeIII	GTNAC	6 cut(s)	637, 643, 870, 939, 1664, 2428
MfeI	CAATTG	1 cut(s)	2004
MflI	RGATCY	4 cut(s)	482, 830, 902, 1494
MhlI	GDGCHC	3 cut(s)	112, 1738, 2130
MlsI	TGGCCA	2 cut(s)	402, 2230
MluNI	TGGCCA	2 cut(s)	402, 2230
MlyI	GAGTC	5 cut(s)	170, 383, 437, 867, 878
MmeI	TCCRAC	3 cut(s)	144, 233, 979
Mox20I	TGGCCA	2 cut(s)	402, 2230
Mph1103I	ATGCAT	1 cut(s)	988
MroXI	GAANNNNTTC	1 cut(s)	2358
MscI	TGGCCA	2 cut(s)	402, 2230
MslI	CAYNNNNRTG	3 cut(s)	786, 1404, 1563
Msp20I	TGGCCA	2 cut(s)	402, 2230
MspI	CCGG	1 cut(s)	2130
MspR9I	CCNGG	6 cut(s)	579, 945, 1020, 1500, 2130, 2131
MunI	CAATTG	1 cut(s)	2004
Mva1269I	GAATGC	1 cut(s)	187
MvaI	CCWGG	4 cut(s)	579, 945, 1020, 1500
MwoI	GCNNNNNNNGC	4 cut(s)	712, 1932, 2009, 2300
NciI	CCSGG	2 cut(s)	2130, 2131
NcoI	CCATGG	1 cut(s)	1458
NlaIII	CATG	9 cut(s)	776, 800, 1069, 1457, 1462, 1742, 1828, 1877, 2366
NlaIV	GGNNCC	5 cut(s)	109, 196, 552, 1096, 2127
NmuCI	GTSAC	3 cut(s)	637, 643, 870
NsiI	ATGCAT	1 cut(s)	988
NspV	TTCGAA	2 cut(s)	1193, 1393
OliI	CACNNNNGTG	1 cut(s)	1563
PciSI	GCTCTTC	1 cut(s)	1169
PctI	GAATGC	1 cut(s)	187
PdmI	GAANNNNTTC	1 cut(s)	2358
PfeI	GAWTC	4 cut(s)	236, 332, 1307, 1523
PflFI	GACNNNGTC	3 cut(s)	491, 542, 868
PflMI	CCANNNNNTGG	1 cut(s)	104
PkrI	GCNGC	6 cut(s)	36, 39, 771, 808, 1299, 2011
PleI	GAGTC	5 cut(s)	169, 383, 437, 866, 877
PpsI	GAGTC	5 cut(s)	169, 383, 437, 866, 877
Ppu21I	YACGTR	1 cut(s)	1669
PpuMI	RGGWCCY	1 cut(s)	195
Psp5II	RGGWCCY	1 cut(s)	195
Psp6I	CCWGG	4 cut(s)	577, 943, 1018, 1498
PspFI	CCCAGC	1 cut(s)	1098
PspGI	CCWGG	4 cut(s)	577, 943, 1018, 1498
PspN4I	GGNNCC	5 cut(s)	109, 196, 552, 1096, 2127
PspPI	GGNCC	3 cut(s)	195, 575, 1094
PspPPI	RGGWCCY	1 cut(s)	195
PstI	CTGCAG	2 cut(s)	808, 1057
PstNI	CAGNNNCTG	4 cut(s)	356, 536, 647, 1061
PsuI	RGATCY	4 cut(s)	482, 830, 902, 1494
PsyI	GACNNNGTC	3 cut(s)	491, 542, 868
RsaI	GTAC	2 cut(s)	1504, 2171
RsaNI	GTAC	2 cut(s)	1503, 2170
RseI	CAYNNNNRTG	3 cut(s)	786, 1404, 1563
SapI	GCTCTTC	1 cut(s)	1169
SatI	GCNGC	6 cut(s)	35, 38, 770, 807, 1298, 2010
Sau96I	GGNCC	3 cut(s)	195, 575, 1094
SchI	GAGTC	5 cut(s)	170, 383, 437, 867, 878
ScrFI	CCNGG	6 cut(s)	579, 945, 1020, 1500, 2130, 2131
SduI	GDGCHC	3 cut(s)	112, 1738, 2130
SexAI	ACCWGGT	2 cut(s)	577, 943
SfaNI	GCATC	7 cut(s)	514, 761, 995, 1296, 1411, 1741, 1978
SfcI	CTRYAG	6 cut(s)	144, 528, 804, 993, 1053, 1527
SfuI	TTCGAA	2 cut(s)	1193, 1393
SinI	GGWCC	2 cut(s)	195, 575
SmaI	CCCGGG	1 cut(s)	2131
SmiMI	CAYNNNNRTG	3 cut(s)	786, 1404, 1563
SmlI	CTYRAG	1 cut(s)	884
SmoI	CTYRAG	1 cut(s)	884
SpeI	ACTAGT	1 cut(s)	1472
SsiI	CCGC	4 cut(s)	35, 38, 715, 2318
SspI	AATATT	4 cut(s)	2095, 2236, 2425, 2453
SspMI	CTAG	5 cut(s)	957, 1089, 1473, 1683, 2115
StyD4I	CCNGG	6 cut(s)	577, 943, 1018, 1498, 2128, 2129
StyI	CCWWGG	2 cut(s)	837, 1458
TaiI	ACGT	2 cut(s)	1567, 1671
TaqI	TCGA	3 cut(s)	321, 1193, 1393
TatI	WGTACW	1 cut(s)	2169
TauI	GCSGC	2 cut(s)	37, 40
TfiI	GAWTC	4 cut(s)	236, 332, 1307, 1523
TscAI	CASTG	6 cut(s)	109, 322, 577, 648, 2082, 2404
TseFI	GTSAC	3 cut(s)	637, 643, 870
TseI	GCWGC	4 cut(s)	769, 806, 1297, 2009
Tsp45I	GTSAC	3 cut(s)	637, 643, 870
TspMI	CCCGGG	1 cut(s)	2129
TspRI	CASTG	6 cut(s)	109, 322, 577, 648, 2082, 2404
Tth111I	GACNNNGTC	3 cut(s)	491, 542, 868
Van91I	CCANNNNNTGG	1 cut(s)	104
VpaK11BI	GGWCC	2 cut(s)	195, 575
XagI	CCTNNNNNAGG	1 cut(s)	1053
XapI	RAATTY	5 cut(s)	733, 1074, 1782, 1973, 2358
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1939
XmaI	CCCGGG	1 cut(s)	2129
XmnI	GAANNNNTTC	1 cut(s)	2358
XspI	CTAG	5 cut(s)	957, 1089, 1473, 1683, 2115
Zsp2I	ATGCAT	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.