Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0006120

Physical Location & Seq

Genomic Coordinates Reverse (-)

6706925 .. 6711532

Gene Structure 4608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1080700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGGATTCTCAAGAAATTTTGGTTAAGAATCTGGTAATGAAAGTTAAACAAGAATTGTTTTCACCGGATGTTGATCTTGTTTCTCTTGTTCCTCCTTCTCCTTACGACATTGCGTGGCTGTCGATGATTTCGAATCCTCACCGAGGATCAGATGAACCCTTGTTCAAAGGATGCTTGGACTGGGTCCTCCAACACCAAACCACACGAGGCTTTTGGGGAGATGATGACCATGTTCCAACCATAGAGTCCCTCACTTCAACTCTAGCTTGCATTGTTGCACTTGCCATATGGGATGTTGGCCATGATGCCATTCAGAAAGGGCTAGCATTCATCCATGCAACCACAGAGAAGCTACTGGAAGAGCAAAATAATTCTTTTCTTGAGTGGTTTGTGATTGTTTTCCCAGCAATGGTGGAACTTGCAGAGAGCAAAGGACTGAATGTTCATTTTTCTCATGGTTCAACAGCGTTGGTAGAACAAGTCTTCCAAAAGAGACAACAAATATTCCAAATGCATAGGTTGGTGCATAGTGGTGATCAGCAACAGTACTATTCACCAGAACTCATGCAATACCTGGAAGCTTTGCCTGCTGAAGCATATGATATTAACCTCAATGAGACTCTACTATTATGCCAAAGTGAGGAAGATGGGCTGTTAATCCAATCCCCATCAGCTATTGCATATGCTTTTATGAAGACAGGACGCAAGGAGTTTTTGTCCAAATTGAATTCTATTGTCCAAAAATGCGGGTTCTCAGTTCCTGCGATCTACCCCATGGATGAAAACCTTCTAAGGGTTTGTCTTGTTAATCGTACTGAGAGGCTGGGACTGGCAGAGCATTTCATGGCAGAGATAACAACTATGCTGGGACAAGTTTACAGAAGTTACATCAGTTGCGAAGAGCCAAAGAGCAAGGAAAAGCATGCCATGCCACTTCAACTATATAAAGATTCACTTGCGTTTCGACTTCTCAGACTTCACGGTTATACAGTATCTCCTCGGAAGTTCTGCTGGTTCCTTCATGACGAAGATATGATGGTGTACATAGAAGAGCACCATGAAACTTTTCTGAGTGCCATGTATAATGTATACAGGGCGACTGATGTGACCTTTACAGGAGAAAGTGAGCTTGAGGATGTTAAGGAATTCTCTAAAAGAATACTAGAAAAGGAAACAATAAAAGATTCTAAGAATCTGGTCGGGCCTTCTAGTATGAATGGCTTGCAAGACCAGATTACGCATGAAATTAGTATTCCATGGCTTGCTCGGTTGGATCATCTGGAGCACAGGAAGTTCATTGAGACGAAATTAGAGCCTGCTGGTCCATGGATAGGAAAGGGTTTATCCTGCAGATTATCATGTCAAAGCAATGCCATGCTGCTACAACTTGCTATGGAGAACTATACACTACGGCAGTCCATATTCAGAAATGAATTAAAGGAGTTAGAAAGGTGGTCAAAGGACACTGGTCTTGTTGACATGGGGTTTGCTAGACAGAAAACCGCGTACTGTTATTTTGCAGTTGCTTCAACAGCATCACATTCTTCCCTGTCATATGTACGGTCCGCACTTGTGAAAGCCGCAGTCCTTGTTACAGTTGCTGATGATTTTTTTGACAAGGAAGGTTCGATGAATGAATTGGAAGCTCTTGTCAAGGGCGTCGAGAGATGGCAGGAAAAAGGACTAGAAGGACATGGAAAAGCTATATTCAAGTCTCTAAAAGATTTTGTTGATGACATTTCTTGGCAATTCTTCAAACAAAATGGATATGACATAAAGAGTTATATTCAGGATCTATGGCATCAAACATTTGTAAGCTGGTTAAAGGAAGCAGAATGGGGCAGAAATGGGCATCCCTTGTCAATTGTTGAGTACCTCCAAGTAGCCACAAGATCCATTGCTTCACAGACTATTATTCTTACAGCTGCTCTTCTACTTGATACACCTCCGGGATTAGAGATCCTAAAGTCCCCTCAAAGTCATCCACATACAAATTCACTTATGCTTTTGACACGGCTTTTGAACGAAATTCAAAGCTATCAGGGAGCAAGAGGAGGGGAAGCCAAACCTTGTTCTGCTACACATGAAGGGAAATCCCAATTTGGGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001101 GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006979 GO:0007584 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031667 GO:0042221 GO:0042493 GO:0043207 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0080013 GO:0080027 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00904 map00904

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

704

Amino Acids

79.96

Weight (kDa)

5.61

Isoelectric Point (pI)

42.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	236 - 415	2e-30	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	487 - 682	1.2e-39	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	527 - 681	2.8e-24	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61120
malus_domestica	MD17G1080300.v1.1 MD17G1080400.v1.1 MD17G1080500.v1.1 MD17G1080700.v1.1 MD17G1080800.v1.1
prunus_persica	Prupe.3G234300_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0162311
rosa_laevigata	RLG00000021334 RLG00000021337
rosa_multiflora	Rmu_co8462281.1_g000001 Rmu_sc0004020.1_g000013
rosa_roxburghii	Rroxscaffold_2G00088040 Rroxscaffold_2G00088060 Rroxscaffold_2G00088110
rosa_rugosa	Rorug02G0496200 Rorug02G0496300
rosa_samantha	Rh2AG562300 Rh2AG562400 Rh2BG575400 Rh2CG545800 Rh2DG585200 Rh2DG585600
rosa_wichuraiana	Rw2G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1089
AccII	CGCG	1 cut(s)	1505
AciI	CCGC	4 cut(s)	747, 1503, 1566, 1581
AclWI	GGATC	5 cut(s)	154, 1281, 1800, 1887, 1954
AcoI	YGGCCR	1 cut(s)	298
AcsI	RAATTY	5 cut(s)	15, 727, 1145, 1993, 2028
AcuI	CTGAAG	1 cut(s)	612
AcyI	GRCGYC	1 cut(s)	1659
AfaI	GTAC	6 cut(s)	548, 814, 1043, 1508, 1560, 1874
AfiI	CCNNNNNNNGG	7 cut(s)	143, 409, 640, 793, 1331, 2103, 2104
AjnI	CCWGG	1 cut(s)	573
AloI	GAACNNNNNNTCC	4 cut(s)	426, 458, 468, 500
Alw21I	GWGCWC	2 cut(s)	1056, 1287
Alw26I	GTCTC	4 cut(s)	487, 611, 1295, 1719
AlwI	GGATC	5 cut(s)	154, 1281, 1800, 1887, 1954
AlwNI	CAGNNNCTG	2 cut(s)	761, 1601
AoxI	GGCC	2 cut(s)	298, 1202
ApeKI	GCWGC	2 cut(s)	1378, 1925
ApoI	RAATTY	5 cut(s)	15, 727, 1145, 1993, 2028
ArsI	GACNNNNNNTTYG	4 cut(s)	1469, 1501, 2002, 2034
Asp700I	GAANNNNTTC	2 cut(s)	786, 1065
AspS9I	GGNCC	4 cut(s)	184, 1202, 1322, 1563
AsuC2I	CCSGG	1 cut(s)	1950
AsuHPI	GGTGA	4 cut(s)	54, 131, 545, 546
AsuII	TTCGAA	1 cut(s)	131
AsuNHI	GCTAGC	1 cut(s)	322
AvaII	GGWCC	3 cut(s)	184, 1322, 1563
BalI	TGGCCA	1 cut(s)	300
BauI	CACGAG	1 cut(s)	204
BbsI	GAAGAC	2 cut(s)	475, 701
Bbv12I	GWGCWC	2 cut(s)	1056, 1287
BbvI	GCAGC	2 cut(s)	1365, 1912
BccI	CCATC	4 cut(s)	641, 676, 1030, 1662
BceAI	ACGGC	2 cut(s)	1427, 2030
BciT130I	CCWGG	1 cut(s)	575
BclI	TGATCA	1 cut(s)	535
BcnI	CCSGG	1 cut(s)	1950
BcoDI	GTCTC	4 cut(s)	487, 611, 1295, 1719
BfaI	CTAG	6 cut(s)	263, 323, 1163, 1209, 1491, 1685
BfmI	CTRYAG	1 cut(s)	1348
BisI	GCNGC	3 cut(s)	1379, 1581, 1926
BlsI	GCNGC	3 cut(s)	1380, 1582, 1927
BmcAI	AGTACT	1 cut(s)	548
Bme1390I	CCNGG	2 cut(s)	575, 1950
Bme18I	GGWCC	3 cut(s)	184, 1322, 1563
BmgT120I	GGNCC	4 cut(s)	184, 1202, 1322, 1563
BmiI	GGNNCC	2 cut(s)	185, 1016
BmrFI	CCNGG	2 cut(s)	575, 1950
BmrI	ACTGGG	1 cut(s)	190
BmsI	GCATC	5 cut(s)	161, 295, 1544, 1810, 1861
BmtI	GCTAGC	1 cut(s)	326
BmuI	ACTGGG	1 cut(s)	190
BoxI	GACNNNNGTC	1 cut(s)	1467
BpiI	GAAGAC	2 cut(s)	475, 701
BpmI	CTGGAG	1 cut(s)	1301
Bpu14I	TTCGAA	1 cut(s)	131
BpuEI	CTTGAG	2 cut(s)	401, 1151
BpuMI	CCSGG	1 cut(s)	1950
BsaBI	GATNNNNATC	1 cut(s)	72
BsaHI	GRCGYC	1 cut(s)	1659
BsaJI	CCNNGG	5 cut(s)	142, 774, 998, 1256, 1325
BsaWI	WCCGGW	1 cut(s)	64
BsaXI	ACNNNNNCTCC	4 cut(s)	701, 731, 979, 1009
Bsc4I	CCNNNNNNNGG	7 cut(s)	143, 409, 640, 793, 1331, 2103, 2104
Bse1I	ACTGG	4 cut(s)	185, 360, 834, 1471
Bse3DI	GCAATG	4 cut(s)	108, 414, 1375, 1896
Bse8I	GATNNNNATC	1 cut(s)	72
BseBI	CCWGG	1 cut(s)	575
BseDI	CCNNGG	5 cut(s)	142, 774, 998, 1256, 1325
BseGI	GGATG	8 cut(s)	73, 176, 298, 330, 784, 1141, 1852, 1981
BseJI	GATNNNNATC	1 cut(s)	72
BseLI	CCNNNNNNNGG	7 cut(s)	143, 409, 640, 793, 1331, 2103, 2104
BseMI	GCAATG	4 cut(s)	108, 414, 1375, 1896
BseMII	CTCAG	4 cut(s)	768, 807, 985, 1061
BseNI	ACTGG	4 cut(s)	185, 360, 834, 1471
BseRI	GAGGAG	2 cut(s)	987, 2067
BseXI	GCAGC	2 cut(s)	1365, 1912
BseYI	CCCAGC	3 cut(s)	403, 823, 865
Bsh1236I	CGCG	1 cut(s)	1505
BshFI	GGCC	2 cut(s)	300, 1204
BsiHKAI	GWGCWC	2 cut(s)	1056, 1287
BsiSI	CCGG	2 cut(s)	65, 1949
BslFI	GGGAC	4 cut(s)	232, 840, 882, 1954
BslI	CCNNNNNNNGG	7 cut(s)	143, 409, 640, 793, 1331, 2103, 2104
BsmAI	GTCTC	4 cut(s)	487, 611, 1295, 1719
BsmBI	CGTCTC	1 cut(s)	1295
BsmFI	GGGAC	4 cut(s)	232, 840, 882, 1954
BsmI	GAATGC	1 cut(s)	326
BsnI	GGCC	2 cut(s)	300, 1204
Bsp119I	TTCGAA	1 cut(s)	131
Bsp1286I	GDGCHC	2 cut(s)	1056, 1287
Bsp1407I	TGTACA	1 cut(s)	1041
Bsp143I	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
Bsp19I	CCATGG	3 cut(s)	774, 1256, 1325
BspACI	CCGC	4 cut(s)	747, 1503, 1566, 1581
BspANI	GGCC	2 cut(s)	300, 1204
BspCNI	CTCAG	4 cut(s)	767, 808, 984, 1062
BspFNI	CGCG	1 cut(s)	1505
BspHI	TCATGA	1 cut(s)	1021
BspLI	GGNNCC	2 cut(s)	185, 1016
BspMAI	CTGCAG	1 cut(s)	1352
BspOI	GCTAGC	1 cut(s)	326
BspPI	GGATC	5 cut(s)	154, 1281, 1800, 1887, 1954
BspQI	GCTCTTC	4 cut(s)	354, 894, 1044, 1935
BspT104I	TTCGAA	1 cut(s)	131
BsrDI	GCAATG	4 cut(s)	108, 414, 1375, 1896
BsrGI	TGTACA	1 cut(s)	1041
BsrI	ACTGG	4 cut(s)	185, 360, 834, 1471
BssECI	CCNNGG	5 cut(s)	142, 774, 998, 1256, 1325
BssMI	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
BssNAI	GTATAC	1 cut(s)	1090
BssNI	GRCGYC	1 cut(s)	1659
BssSI	CACGAG	1 cut(s)	204
BssT1I	CCWWGG	3 cut(s)	774, 1256, 1325
Bst1107I	GTATAC	1 cut(s)	1090
Bst2BI	CACGAG	1 cut(s)	204
Bst2UI	CCWGG	1 cut(s)	575
Bst4CI	ACNGT	6 cut(s)	546, 983, 991, 1511, 1563, 1597
Bst6I	CTCTTC	4 cut(s)	354, 894, 1044, 1935
BstACI	GRCGYC	1 cut(s)	1659
BstAPI	GCANNNNNTGC	1 cut(s)	928
BstAUI	TGTACA	1 cut(s)	1041
BstBI	TTCGAA	1 cut(s)	131
BstC8I	GCNNGC	7 cut(s)	268, 324, 588, 924, 1223, 1263, 1317
BstDEI	CTNAG	6 cut(s)	754, 791, 816, 971, 1070, 1188
BstDSI	CCRYGG	3 cut(s)	774, 1256, 1325
BstENI	CCTNNNNNAGG	1 cut(s)	141
BstF5I	GGATG	8 cut(s)	73, 176, 298, 330, 784, 1141, 1852, 1981
BstFNI	CGCG	1 cut(s)	1505
BstKTI	GATC	8 cut(s)	76, 149, 538, 768, 1276, 1795, 1895, 1962
BstMAI	GTCTC	4 cut(s)	487, 611, 1295, 1719
BstMBI	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
BstMWI	GCNNNNNNNGC	3 cut(s)	587, 928, 1532
BstNI	CCWGG	1 cut(s)	575
BstNSI	RCATGY	1 cut(s)	926
BstPAI	GACNNNNGTC	1 cut(s)	1467
BstSCI	CCNGG	2 cut(s)	573, 1948
BstSFI	CTRYAG	1 cut(s)	1348
BstUI	CGCG	1 cut(s)	1505
BstV1I	GCAGC	2 cut(s)	1365, 1912
BstV2I	GAAGAC	2 cut(s)	475, 701
BstX2I	RGATCY	3 cut(s)	1792, 1892, 1959
BstYI	RGATCY	3 cut(s)	1792, 1892, 1959
BstZ17I	GTATAC	1 cut(s)	1090
BsuRI	GGCC	2 cut(s)	300, 1204
BtgI	CCRYGG	3 cut(s)	774, 1256, 1325
BtsCI	GGATG	8 cut(s)	73, 176, 298, 330, 784, 1141, 1852, 1981
BtsIMutI	CAGTG	1 cut(s)	1464
Cac8I	GCNNGC	7 cut(s)	268, 324, 588, 924, 1223, 1263, 1317
CaiI	CAGNNNCTG	2 cut(s)	761, 1601
CciI	TCATGA	1 cut(s)	1021
Cfr13I	GGNCC	4 cut(s)	184, 1202, 1322, 1563
CpoI	CGGWCCG	1 cut(s)	1563
CseI	GACGC	2 cut(s)	711, 1648
Csp6I	GTAC	6 cut(s)	547, 813, 1042, 1507, 1559, 1873
CspI	CGGWCCG	1 cut(s)	1563
CviQI	GTAC	6 cut(s)	547, 813, 1042, 1507, 1559, 1873
DdeI	CTNAG	6 cut(s)	754, 791, 816, 971, 1070, 1188
DpnI	GATC	8 cut(s)	75, 148, 537, 767, 1275, 1794, 1894, 1961
DpnII	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
EaeI	YGGCCR	1 cut(s)	298
Eam1104I	CTCTTC	4 cut(s)	354, 894, 1044, 1935
EarI	CTCTTC	4 cut(s)	354, 894, 1044, 1935
Eco130I	CCWWGG	3 cut(s)	774, 1256, 1325
Eco47I	GGWCC	3 cut(s)	184, 1322, 1563
Eco57I	CTGAAG	1 cut(s)	612
EcoNI	CCTNNNNNAGG	1 cut(s)	141
EcoO109I	RGGNCCY	1 cut(s)	184
EcoRI	GAATTC	2 cut(s)	727, 1145
EcoRII	CCWGG	1 cut(s)	573
EcoT14I	CCWWGG	3 cut(s)	774, 1256, 1325
EcoT22I	ATGCAT	1 cut(s)	516
ErhI	CCWWGG	3 cut(s)	774, 1256, 1325
Esp3I	CGTCTC	1 cut(s)	1295
FalI	AAGNNNNNCTT	2 cut(s)	939, 971
FaqI	GGGAC	4 cut(s)	232, 840, 882, 1954
FauI	CCCGC	1 cut(s)	740
FauNDI	CATATG	4 cut(s)	287, 598, 682, 1555
FbaI	TGATCA	1 cut(s)	535
FblI	GTMKAC	1 cut(s)	1089
Fnu4HI	GCNGC	3 cut(s)	1379, 1581, 1926
FokI	GGATG	8 cut(s)	80, 183, 305, 317, 791, 1148, 1839, 1968
Fsp4HI	GCNGC	3 cut(s)	1379, 1581, 1926
FspBI	CTAG	6 cut(s)	263, 323, 1163, 1209, 1491, 1685
GluI	GCNGC	3 cut(s)	1379, 1581, 1926
GsaI	CCCAGC	3 cut(s)	407, 827, 869
GsuI	CTGGAG	1 cut(s)	1301
HaeIII	GGCC	2 cut(s)	300, 1204
HapII	CCGG	2 cut(s)	65, 1949
HgaI	GACGC	2 cut(s)	711, 1648
Hin1I	GRCGYC	1 cut(s)	1659
HincII	GTYRAC	1 cut(s)	1477
HindII	GTYRAC	1 cut(s)	1477
HindIII	AAGCTT	1 cut(s)	579
HinfI	GANTC	8 cut(s)	5, 28, 133, 245, 619, 950, 1184, 1192
HpaII	CCGG	2 cut(s)	65, 1949
HphI	GGTGA	4 cut(s)	54, 131, 545, 546
Hpy166II	GTNNAC	4 cut(s)	877, 1042, 1090, 1477
Hpy188I	TCNGA	6 cut(s)	151, 315, 974, 1002, 1071, 1427
Hpy188III	TCNNGA	6 cut(s)	11, 380, 1022, 1280, 1663, 1790
Hpy8I	GTNNAC	4 cut(s)	877, 1042, 1090, 1477
Hpy99I	CGWCG	1 cut(s)	1664
HpyAV	CCTTC	7 cut(s)	105, 797, 1028, 1215, 1616, 1682, 2081
HpyCH4III	ACNGT	6 cut(s)	546, 983, 991, 1511, 1563, 1597
HpyF10VI	GCNNNNNNNGC	3 cut(s)	587, 928, 1532
HpyF3I	CTNAG	6 cut(s)	754, 791, 816, 971, 1070, 1188
Hsp92I	GRCGYC	1 cut(s)	1659
Ksp22I	TGATCA	1 cut(s)	535
Kzo9I	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
LguI	GCTCTTC	4 cut(s)	354, 894, 1044, 1935
LmnI	GCTCC	2 cut(s)	1282, 2045
Lsp1109I	GCAGC	2 cut(s)	1365, 1912
LweI	GCATC	5 cut(s)	161, 295, 1544, 1810, 1861
MaeI	CTAG	6 cut(s)	263, 323, 1163, 1209, 1491, 1685
MaeIII	GTNAC	3 cut(s)	884, 1105, 1591
MalI	GATC	8 cut(s)	75, 148, 537, 767, 1275, 1794, 1894, 1961
MboI	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
MfeI	CAATTG	1 cut(s)	1863
MflI	RGATCY	3 cut(s)	1792, 1892, 1959
MhlI	GDGCHC	2 cut(s)	1056, 1287
MlsI	TGGCCA	1 cut(s)	300
MluNI	TGGCCA	1 cut(s)	300
MlyI	GAGTC	2 cut(s)	254, 613
MmeI	TCCRAC	3 cut(s)	214, 260, 1251
Mox20I	TGGCCA	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	516
MroXI	GAANNNNTTC	2 cut(s)	786, 1065
MscI	TGGCCA	1 cut(s)	300
MseI	TTAA	8 cut(s)	24, 45, 606, 656, 807, 1140, 1436, 1823
MslI	CAYNNNNRTG	1 cut(s)	531
Msp20I	TGGCCA	1 cut(s)	300
MspA1I	CMGCKG	1 cut(s)	1925
MspI	CCGG	2 cut(s)	65, 1949
MspR9I	CCNGG	2 cut(s)	575, 1950
MunI	CAATTG	1 cut(s)	1863
Mva1269I	GAATGC	1 cut(s)	326
MvaI	CCWGG	1 cut(s)	575
MvnI	CGCG	1 cut(s)	1505
MwoI	GCNNNNNNNGC	3 cut(s)	587, 928, 1532
NciI	CCSGG	1 cut(s)	1950
NcoI	CCATGG	3 cut(s)	774, 1256, 1325
NdeI	CATATG	4 cut(s)	287, 598, 682, 1555
NdeII	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
NheI	GCTAGC	1 cut(s)	322
NlaIV	GGNNCC	2 cut(s)	185, 1016
NmuCI	GTSAC	1 cut(s)	1105
NsiI	ATGCAT	1 cut(s)	516
NspI	RCATGY	1 cut(s)	926
NspV	TTCGAA	1 cut(s)	131
PaeI	GCATGC	1 cut(s)	926
PagI	TCATGA	1 cut(s)	1021
PciSI	GCTCTTC	4 cut(s)	354, 894, 1044, 1935
PcsI	WCGNNNNNNNCGW	1 cut(s)	128
PctI	GAATGC	1 cut(s)	326
PdmI	GAANNNNTTC	2 cut(s)	786, 1065
PfeI	GAWTC	6 cut(s)	5, 28, 133, 950, 1184, 1192
PflFI	GACNNNGTC	1 cut(s)	182
PfoI	TCCNGGA	1 cut(s)	1948
PkrI	GCNGC	3 cut(s)	1380, 1582, 1927
PleI	GAGTC	2 cut(s)	253, 613
PpsI	GAGTC	2 cut(s)	253, 613
PpuMI	RGGWCCY	1 cut(s)	184
PshAI	GACNNNNGTC	1 cut(s)	1467
Psp5II	RGGWCCY	1 cut(s)	184
Psp6I	CCWGG	1 cut(s)	573
PspFI	CCCAGC	3 cut(s)	403, 823, 865
PspGI	CCWGG	1 cut(s)	573
PspN4I	GGNNCC	2 cut(s)	185, 1016
PspPI	GGNCC	4 cut(s)	184, 1202, 1322, 1563
PspPPI	RGGWCCY	1 cut(s)	184
PstI	CTGCAG	1 cut(s)	1352
PstNI	CAGNNNCTG	2 cut(s)	761, 1601
PsuI	RGATCY	3 cut(s)	1792, 1892, 1959
PsyI	GACNNNGTC	1 cut(s)	182
PvuII	CAGCTG	1 cut(s)	1925
RsaI	GTAC	6 cut(s)	548, 814, 1043, 1508, 1560, 1874
RsaNI	GTAC	6 cut(s)	547, 813, 1042, 1507, 1559, 1873
RseI	CAYNNNNRTG	1 cut(s)	531
Rsr2I	CGGWCCG	1 cut(s)	1563
RsrII	CGGWCCG	1 cut(s)	1563
SapI	GCTCTTC	4 cut(s)	354, 894, 1044, 1935
SaqAI	TTAA	8 cut(s)	24, 45, 606, 656, 807, 1140, 1436, 1823
SatI	GCNGC	3 cut(s)	1379, 1581, 1926
Sau3AI	GATC	8 cut(s)	73, 146, 535, 765, 1273, 1792, 1892, 1959
Sau96I	GGNCC	4 cut(s)	184, 1202, 1322, 1563
ScaI	AGTACT	1 cut(s)	548
SchI	GAGTC	2 cut(s)	254, 613
ScrFI	CCNGG	2 cut(s)	575, 1950
SduI	GDGCHC	2 cut(s)	1056, 1287
SfaNI	GCATC	5 cut(s)	161, 295, 1544, 1810, 1861
SfcI	CTRYAG	1 cut(s)	1348
SfuI	TTCGAA	1 cut(s)	131
SinI	GGWCC	3 cut(s)	184, 1322, 1563
SmiMI	CAYNNNNRTG	1 cut(s)	531
SmlI	CTYRAG	3 cut(s)	9, 380, 1130
SmoI	CTYRAG	3 cut(s)	9, 380, 1130
SphI	GCATGC	1 cut(s)	926
SsiI	CCGC	4 cut(s)	747, 1503, 1566, 1581
SspI	AATATT	1 cut(s)	504
SspMI	CTAG	6 cut(s)	263, 323, 1163, 1209, 1491, 1685
StyD4I	CCNGG	2 cut(s)	573, 1948
StyI	CCWWGG	3 cut(s)	774, 1256, 1325
TaaI	ACNGT	6 cut(s)	546, 983, 991, 1511, 1563, 1597
TaqI	TCGA	5 cut(s)	122, 131, 964, 1628, 1662
TatI	WGTACW	2 cut(s)	546, 1041
TauI	GCSGC	1 cut(s)	1583
TfiI	GAWTC	6 cut(s)	5, 28, 133, 950, 1184, 1192
Tru1I	TTAA	8 cut(s)	24, 45, 606, 656, 807, 1140, 1436, 1823
Tru9I	TTAA	8 cut(s)	24, 45, 606, 656, 807, 1140, 1436, 1823
TscAI	CASTG	1 cut(s)	1471
TseFI	GTSAC	1 cut(s)	1105
TseI	GCWGC	2 cut(s)	1378, 1925
Tsp45I	GTSAC	1 cut(s)	1105
TspRI	CASTG	1 cut(s)	1471
Tth111I	GACNNNGTC	1 cut(s)	182
VpaK11BI	GGWCC	3 cut(s)	184, 1322, 1563
XagI	CCTNNNNNAGG	1 cut(s)	141
XapI	RAATTY	5 cut(s)	15, 727, 1145, 1993, 2028
XceI	RCATGY	1 cut(s)	926
XmiI	GTMKAC	1 cut(s)	1089
XmnI	GAANNNNTTC	2 cut(s)	786, 1065
XspI	CTAG	6 cut(s)	263, 323, 1163, 1209, 1491, 1685
ZrmI	AGTACT	1 cut(s)	548
Zsp2I	ATGCAT	1 cut(s)	516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.