Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0006120

Physical Location & Seq

Genomic Coordinates Forward (+)

81641215 .. 81647593

Gene Structure 6379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG585200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGAATTGCCAGACTACTCATTGGTTAAGAATCTTGTAATGAAGGTTAAAAAGGAGATGTTCTCATCTTCATCTTCATCATCAGAACATGATGATGATCATGTAGTGGATGATGTATATCGTCTTGTGTCTCCTTCTGCTTACGACACTGCTTGGCTCGCCATGGTTCCGAATCCTGAAAAACCAGATCGGCCCTTGTTCCGGGGATGCTTGCAATGGGTGCTCCGGAACCAAAAACCAGGAGGCTTCTGGGGATCATCAGAGTCGACCTCTATAAGTACCTTATACTCCCTCACTTCGACTCTCGCTTGCATTGTTGCACTCACCACCTGGAGTGTTGGCCACACTGCCATTCAAAAGGGGTTGGGGTTCATTCATGCAAATGCAGAAGAGATACTGAAAGAGCAAAATGGCTGCTTTCCCGAGTGGTTTGTACTTCTTTTACCGGCAATAGTTGACCTTGCAAAGACCAAAGGCCTGCATGTTCATTTCTCAAATGGTTCAAAAGCGCATATACAACAGATCTTCCATGAGAGACAACAACTATTCCAAATCAACAGGTCGGGACAGGAGTACTATGAGACACTGATGCCATATCTTGAAGCTTTGCCGGAGAGTTATAATGAGATTTTGCTACAACAGAGTGAAGATTATGGGATCCTCATCCAGTTTCCATCAGCCACCGCCTATGCTTTTATGAAGACAGGAAATAAGAATCTTTTGGTGAATTTGAATTCTGTTGTCCAAAGATGTGGATATGGAGTTCCTGCGATTTACCCCATGGATGAAGACCTCGTAAAGATTTGTCTTATTAATCGAATTGAGACACTGGGCCTAGCAGAGTATTTCATGGAGGAGATAACGATTCTACTTGATCAAGTTTTCAGAAGTTATGTGAACAATGAAGGGACAGAGATGACGGTGAAGCATGGTCTGCTTCCACAAGAACTTTATAGAGATTCACTAGCATTTCGGCTACTGAGACTACATGGCTATACTGTATCTCCTTGGAAGTTCTGCTGGTTCCTCCAAGATGAAGATATATTGGTGCACATAGAAGAGCACCATGAAACGTTTTTGAGTGCCATGTATAATGTATTCAGGGCATCAGATCTTACTTTTGCCGGAGAAAGTCAGCTTGAAGATGCTAGGTTATTCTCTAGAAGAATACTGGAAAAGGAAACAACAAATTCCGAGAAATTGCTGGTAGACCAGATTAAGCATGAACTTAGTCATCCATGGCTTGCTCGGTTGGATCATTTGGAACACAGGAAATGCATTGAGAGGGAAGACGCTATTCATCCATGGACAGGAAAAGCCTTTTCGTATAGACTATCATTTTCGAGTGATGCTATGCTGCAACAACTTGCCATAGAGAATTATTCACTCAGACAATCAATATTCAGAGATGAACTAACCGAGTTACAGATGTGGTCAAAGGACATGGGACTTTGTGACATGGGGTTTGCACGACAGAAAACCGCATACTGTTATTTTGCAGTTGCATCAACTGTATCATCTCCTTCCCTTTCGGATGTGAGACTGGCACTTGTCAAAAGTGCAATCCTTGTTACGGTGGCTGATGATTTTTTTGATGCGGAAGGTTCATTGAGTGATCTCAAAAGTCTTACCAATGCCGTCAAAAGACGGCAGCAGAAAGGCCTGAACGGATACAGCAAAACCATATTTAAAGCTCTGAAGGATCTCCTCGATGACATTTCAATGCAATTCTTCAATAAATATGGATGTGACGTAAACTTATACCTACAAGATCTATGGCATCAAACATTTGTGAAATGGTTAAAGGAGGCAGAGTGGAGAAGAACTGGGCATACCCCATCAATAGCTGAGTACCTTCAAGTCGCCACGAGCTCTATAGCTGCACAAACTATTACTCTTCCAGCAGCTCTTCTGCTTAGTCCACAAGGAATAGAATTCCTCAAGTCCCCTCAAAATGAGCAGCTTACAAATCTACTTATGGTTTCGACACGCCTTTTGAACGATATTGGAACCTACGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001101 GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006979 GO:0007584 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031667 GO:0042221 GO:0042493 GO:0043207 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0080013 GO:0080027 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00904 map00904

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

673

Amino Acids

76.91

Weight (kDa)

5.51

Isoelectric Point (pI)

45.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	225 - 410	4.7e-31	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	480 - 673	5.3e-45	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	520 - 673	4.1e-25	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61120
malus_domestica	MD17G1080300.v1.1 MD17G1080400.v1.1 MD17G1080500.v1.1 MD17G1080700.v1.1 MD17G1080800.v1.1
prunus_persica	Prupe.3G234300_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0162311
rosa_laevigata	RLG00000021334 RLG00000021337
rosa_multiflora	Rmu_co8462281.1_g000001 Rmu_sc0004020.1_g000013
rosa_roxburghii	Rroxscaffold_2G00088040 Rroxscaffold_2G00088060 Rroxscaffold_2G00088110
rosa_rugosa	Rorug02G0496200 Rorug02G0496300
rosa_samantha	Rh2AG562300 Rh2AG562400 Rh2BG575400 Rh2CG545800 Rh2DG585200 Rh2DG585600
rosa_wichuraiana	Rw2G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	621
AccI	GTMKAC	2 cut(s)	266, 1209
AccIII	TCCGGA	1 cut(s)	225
AciI	CCGC	3 cut(s)	684, 1482, 1598
AclI	AACGTT	1 cut(s)	1073
AclWI	GGATC	5 cut(s)	262, 652, 665, 1263, 1710
AcoI	YGGCCR	1 cut(s)	340
AcsI	RAATTY	4 cut(s)	727, 733, 1189, 1934
AcuI	CTGAAG	1 cut(s)	1718
AfaI	GTAC	4 cut(s)	280, 435, 575, 1853
AfiI	CCNNNNNNNGG	3 cut(s)	201, 1310, 1573
AgsI	TTSAA	9 cut(s)	356, 504, 602, 733, 1142, 1722, 1735, 1859, 1999
AjnI	CCWGG	2 cut(s)	238, 329
AloI	GAACNNNNNNTCC	2 cut(s)	747, 779
AluBI	AGCT	8 cut(s)	605, 1138, 1694, 1847, 1872, 1880, 1907, 1963
AluI	AGCT	8 cut(s)	605, 1138, 1694, 1847, 1872, 1880, 1907, 1963
Alw21I	GWGCWC	4 cut(s)	225, 1053, 1065, 1874
Alw26I	GTCTC	6 cut(s)	135, 529, 575, 818, 976, 1534
Alw44I	GTGCAC	1 cut(s)	1049
AlwI	GGATC	5 cut(s)	262, 652, 665, 1263, 1710
Ama87I	CYCGRG	1 cut(s)	422
Aor13HI	TCCGGA	1 cut(s)	225
AoxI	GGCC	5 cut(s)	191, 340, 475, 832, 1660
ApaLI	GTGCAC	1 cut(s)	1049
ApeKI	GCWGC	6 cut(s)	414, 1357, 1651, 1880, 1904, 1960
ApoI	RAATTY	4 cut(s)	727, 733, 1189, 1934
ArsI	GACNNNNNNTTYG	4 cut(s)	1448, 1480, 1978, 2010
AseI	ATTAAT	1 cut(s)	813
AspLEI	GCGC	1 cut(s)	511
AspS9I	GGNCC	2 cut(s)	192, 832
AsuC2I	CCSGG	1 cut(s)	203
AsuHPI	GGTGA	3 cut(s)	316, 736, 934
AvaI	CYCGRG	1 cut(s)	422
BaeGI	GKGCMC	1 cut(s)	1053
BalI	TGGCCA	1 cut(s)	342
BamHI	GGATCC	1 cut(s)	657
BanII	GRGCYC	1 cut(s)	1874
BauI	CACGAG	1 cut(s)	1867
BbsI	GAAGAC	3 cut(s)	707, 795, 1296
Bbv12I	GWGCWC	4 cut(s)	225, 1053, 1065, 1874
BbvI	GCAGC	6 cut(s)	401, 1344, 1663, 1867, 1916, 1972
BccI	CCATC	2 cut(s)	682, 1846
BceAI	ACGGC	2 cut(s)	1622, 1664
BciT130I	CCWGG	2 cut(s)	240, 331
BciVI	GTATCC	1 cut(s)	1664
BclI	TGATCA	2 cut(s)	97, 874
BcnI	CCSGG	1 cut(s)	203
BcoDI	GTCTC	6 cut(s)	135, 529, 575, 818, 976, 1534
BfaI	CTAG	4 cut(s)	836, 965, 1149, 1161
BfmI	CTRYAG	1 cut(s)	1875
BfuI	GTATCC	1 cut(s)	1664
BglII	AGATCT	3 cut(s)	522, 1111, 1771
BisI	GCNGC	6 cut(s)	415, 1358, 1652, 1881, 1905, 1961
BlsI	GCNGC	6 cut(s)	416, 1359, 1653, 1882, 1906, 1962
BmcAI	AGTACT	1 cut(s)	575
Bme1390I	CCNGG	3 cut(s)	203, 240, 331
BmeT110I	CYCGRG	1 cut(s)	422
BmgT120I	GGNCC	2 cut(s)	192, 832
BmiI	GGNNCC	5 cut(s)	168, 230, 659, 1025, 2011
BmrFI	CCNGG	3 cut(s)	203, 240, 331
BmrI	ACTGGG	2 cut(s)	839, 1836
BmsI	GCATC	8 cut(s)	197, 579, 1115, 1135, 1339, 1514, 1585, 1789
BmuI	ACTGGG	2 cut(s)	839, 1836
BpiI	GAAGAC	3 cut(s)	707, 795, 1296
BplI	GAGNNNNNCTC	4 cut(s)	47, 79, 254, 286
BpmI	CTGGAG	1 cut(s)	352
BpuEI	CTTGAG	1 cut(s)	1925
BpuMI	CCSGG	1 cut(s)	203
BsaBI	GATNNNNATC	3 cut(s)	96, 117, 662
BsaJI	CCNNGG	6 cut(s)	162, 202, 780, 1007, 1238, 1304
BsaWI	WCCGGW	1 cut(s)	225
BsaXI	ACNNNNNCTCC	4 cut(s)	988, 1018, 1799, 1829
Bsc4I	CCNNNNNNNGG	3 cut(s)	201, 1310, 1573
Bse118I	RCCGGY	1 cut(s)	445
Bse1I	ACTGG	5 cut(s)	667, 834, 1176, 1548, 1831
Bse3DI	GCAATG	1 cut(s)	221
Bse8I	GATNNNNATC	3 cut(s)	96, 117, 662
BseAI	TCCGGA	1 cut(s)	225
BseBI	CCWGG	2 cut(s)	240, 331
BseDI	CCNNGG	6 cut(s)	162, 202, 780, 1007, 1238, 1304
BseGI	GGATG	8 cut(s)	115, 212, 663, 790, 1234, 1300, 1540, 1751
BseJI	GATNNNNATC	3 cut(s)	96, 117, 662
BseLI	CCNNNNNNNGG	3 cut(s)	201, 1310, 1573
BseMI	GCAATG	1 cut(s)	221
BseMII	CTCAG	3 cut(s)	971, 1402, 1839
BseNI	ACTGG	5 cut(s)	667, 834, 1176, 1548, 1831
BseRI	GAGGAG	2 cut(s)	869, 1697
BseSI	GKGCMC	1 cut(s)	1053
BseXI	GCAGC	6 cut(s)	401, 1344, 1663, 1867, 1916, 1972
BsgI	GTGCAG	1 cut(s)	1866
BshFI	GGCC	5 cut(s)	193, 342, 477, 834, 1662
BsiHKAI	GWGCWC	4 cut(s)	225, 1053, 1065, 1874
BsiHKCI	CYCGRG	1 cut(s)	422
BsiSI	CCGG	5 cut(s)	202, 226, 446, 611, 1125
BslFI	GGGAC	4 cut(s)	579, 922, 1461, 1930
BslI	CCNNNNNNNGG	3 cut(s)	201, 1310, 1573
BsmAI	GTCTC	6 cut(s)	135, 529, 575, 818, 976, 1534
BsmFI	GGGAC	4 cut(s)	579, 922, 1461, 1930
BsnI	GGCC	5 cut(s)	193, 342, 477, 834, 1662
BsoBI	CYCGRG	1 cut(s)	422
Bsp1286I	GDGCHC	4 cut(s)	225, 1053, 1065, 1874
Bsp13I	TCCGGA	1 cut(s)	225
Bsp19I	CCATGG	4 cut(s)	162, 780, 1238, 1304
BspACI	CCGC	3 cut(s)	684, 1482, 1598
BspANI	GGCC	5 cut(s)	193, 342, 477, 834, 1662
BspCNI	CTCAG	3 cut(s)	972, 1401, 1840
BspEI	TCCGGA	1 cut(s)	225
BspLI	GGNNCC	5 cut(s)	168, 230, 659, 1025, 2011
BspPI	GGATC	5 cut(s)	262, 652, 665, 1263, 1710
BspQI	GCTCTTC	2 cut(s)	1053, 1914
BsrDI	GCAATG	1 cut(s)	221
BsrFI	RCCGGY	1 cut(s)	445
BsrI	ACTGG	5 cut(s)	667, 834, 1176, 1548, 1831
BssAI	RCCGGY	1 cut(s)	445
BssECI	CCNNGG	6 cut(s)	162, 202, 780, 1007, 1238, 1304
BssSI	CACGAG	1 cut(s)	1867
BssT1I	CCWWGG	5 cut(s)	162, 780, 1007, 1238, 1304
Bst2BI	CACGAG	1 cut(s)	1867
Bst2UI	CCWGG	2 cut(s)	240, 331
Bst4CI	ACNGT	5 cut(s)	922, 1000, 1490, 1513, 1576
Bst6I	CTCTTC	4 cut(s)	384, 1053, 1902, 1914
BstAPI	GCANNNNNTGC	2 cut(s)	220, 934
BstC8I	GCNNGC	5 cut(s)	159, 212, 310, 479, 1245
BstDEI	CTNAG	5 cut(s)	980, 1229, 1388, 1848, 1916
BstDSI	CCRYGG	4 cut(s)	162, 780, 1238, 1304
BstF5I	GGATG	8 cut(s)	115, 212, 663, 790, 1234, 1300, 1540, 1751
BstHHI	GCGC	1 cut(s)	511
BstMAI	GTCTC	6 cut(s)	135, 529, 575, 818, 976, 1534
BstMWI	GCNNNNNNNGC	3 cut(s)	158, 220, 934
BstNI	CCWGG	2 cut(s)	240, 331
BstNSI	RCATGY	1 cut(s)	485
BstSCI	CCNGG	3 cut(s)	201, 238, 329
BstSFI	CTRYAG	1 cut(s)	1875
BstSLI	GKGCMC	1 cut(s)	1053
BstV1I	GCAGC	6 cut(s)	401, 1344, 1663, 1867, 1916, 1972
BstV2I	GAAGAC	3 cut(s)	707, 795, 1296
BstX2I	RGATCY	5 cut(s)	522, 657, 1111, 1702, 1771
BstXI	CCANNNNNNTGG	1 cut(s)	752
BstYI	RGATCY	5 cut(s)	522, 657, 1111, 1702, 1771
BsuI	GTATCC	1 cut(s)	1664
BsuRI	GGCC	5 cut(s)	193, 342, 477, 834, 1662
BtgI	CCRYGG	4 cut(s)	162, 780, 1238, 1304
BtsCI	GGATG	8 cut(s)	115, 212, 663, 790, 1234, 1300, 1540, 1751
BtsI	GCAGTG	2 cut(s)	147, 345
BtsIMutI	CAGTG	4 cut(s)	147, 345, 584, 827
Cac8I	GCNNGC	5 cut(s)	159, 212, 310, 479, 1245
CfoI	GCGC	1 cut(s)	511
Cfr10I	RCCGGY	1 cut(s)	445
Cfr13I	GGNCC	2 cut(s)	192, 832
CseI	GACGC	1 cut(s)	1301
Csp6I	GTAC	4 cut(s)	279, 434, 574, 1852
CviQI	GTAC	4 cut(s)	279, 434, 574, 1852
DdeI	CTNAG	5 cut(s)	980, 1229, 1388, 1848, 1916
DraI	TTTAAA	1 cut(s)	1690
EaeI	YGGCCR	1 cut(s)	340
Eam1104I	CTCTTC	4 cut(s)	384, 1053, 1902, 1914
EarI	CTCTTC	4 cut(s)	384, 1053, 1902, 1914
Ecl136II	GAGCTC	1 cut(s)	1872
Eco130I	CCWWGG	5 cut(s)	162, 780, 1007, 1238, 1304
Eco147I	AGGCCT	2 cut(s)	477, 1662
Eco24I	GRGCYC	1 cut(s)	1874
Eco53kI	GAGCTC	1 cut(s)	1872
Eco57I	CTGAAG	1 cut(s)	1718
Eco88I	CYCGRG	1 cut(s)	422
EcoICRI	GAGCTC	1 cut(s)	1872
EcoRI	GAATTC	2 cut(s)	733, 1934
EcoRII	CCWGG	2 cut(s)	238, 329
EcoT14I	CCWWGG	5 cut(s)	162, 780, 1007, 1238, 1304
EcoT22I	ATGCAT	1 cut(s)	1280
EcoT38I	GRGCYC	1 cut(s)	1874
ErhI	CCWWGG	5 cut(s)	162, 780, 1007, 1238, 1304
FaqI	GGGAC	4 cut(s)	579, 922, 1461, 1930
FbaI	TGATCA	2 cut(s)	97, 874
FblI	GTMKAC	2 cut(s)	266, 1209
Fnu4HI	GCNGC	6 cut(s)	415, 1358, 1652, 1881, 1905, 1961
FokI	GGATG	8 cut(s)	122, 219, 650, 797, 1221, 1287, 1547, 1758
FriOI	GRGCYC	1 cut(s)	1874
Fsp4HI	GCNGC	6 cut(s)	415, 1358, 1652, 1881, 1905, 1961
FspBI	CTAG	4 cut(s)	836, 965, 1149, 1161
GlaI	GCGC	1 cut(s)	510
GluI	GCNGC	6 cut(s)	415, 1358, 1652, 1881, 1905, 1961
GsuI	CTGGAG	1 cut(s)	352
HaeIII	GGCC	5 cut(s)	193, 342, 477, 834, 1662
HapII	CCGG	5 cut(s)	202, 226, 446, 611, 1125
HgaI	GACGC	1 cut(s)	1301
HhaI	GCGC	1 cut(s)	511
Hin6I	GCGC	1 cut(s)	509
HinP1I	GCGC	1 cut(s)	509
HincII	GTYRAC	2 cut(s)	267, 457
HindII	GTYRAC	2 cut(s)	267, 457
HindIII	AAGCTT	1 cut(s)	603
HinfI	GANTC	7 cut(s)	31, 172, 263, 301, 715, 865, 959
HpaII	CCGG	5 cut(s)	202, 226, 446, 611, 1125
HphI	GGTGA	3 cut(s)	316, 736, 934
Hpy166II	GTNNAC	7 cut(s)	267, 457, 898, 1051, 1210, 1756, 1922
Hpy188III	TCNNGA	6 cut(s)	176, 226, 422, 564, 599, 1161
Hpy8I	GTNNAC	7 cut(s)	267, 457, 898, 1051, 1210, 1756, 1922
HpyAV	CCTTC	7 cut(s)	37, 144, 899, 1533, 1595, 1693, 1865
HpyCH4III	ACNGT	5 cut(s)	922, 1000, 1490, 1513, 1576
HpyCH4IV	ACGT	2 cut(s)	1073, 1752
HpyF10VI	GCNNNNNNNGC	3 cut(s)	158, 220, 934
HpyF3I	CTNAG	5 cut(s)	980, 1229, 1388, 1848, 1916
HpySE526I	ACGT	2 cut(s)	1073, 1752
HspAI	GCGC	1 cut(s)	509
Kpn2I	TCCGGA	1 cut(s)	225
Ksp22I	TGATCA	2 cut(s)	97, 874
LguI	GCTCTTC	2 cut(s)	1053, 1914
LmnI	GCTCC	1 cut(s)	228
Lsp1109I	GCAGC	6 cut(s)	401, 1344, 1663, 1867, 1916, 1972
LweI	GCATC	8 cut(s)	197, 579, 1115, 1135, 1339, 1514, 1585, 1789
MaeI	CTAG	4 cut(s)	836, 965, 1149, 1161
MaeII	ACGT	2 cut(s)	1073, 1752
MaeIII	GTNAC	4 cut(s)	1422, 1454, 1570, 1748
MflI	RGATCY	5 cut(s)	522, 657, 1111, 1702, 1771
MhlI	GDGCHC	4 cut(s)	225, 1053, 1065, 1874
MlsI	TGGCCA	1 cut(s)	342
MluCI	AATT	9 cut(s)	5, 727, 733, 819, 1189, 1199, 1378, 1727, 1934
MluNI	TGGCCA	1 cut(s)	342
MlyI	GAGTC	2 cut(s)	272, 295
MmeI	TCCRAC	1 cut(s)	1233
Mox20I	TGGCCA	1 cut(s)	342
Mph1103I	ATGCAT	1 cut(s)	1280
MroI	TCCGGA	1 cut(s)	225
MscI	TGGCCA	1 cut(s)	342
MseI	TTAA	6 cut(s)	27, 48, 813, 1218, 1689, 1802
MslI	CAYNNNNRTG	3 cut(s)	93, 381, 1721
Msp20I	TGGCCA	1 cut(s)	342
MspI	CCGG	5 cut(s)	202, 226, 446, 611, 1125
MspR9I	CCNGG	3 cut(s)	203, 240, 331
MvaI	CCWGG	2 cut(s)	240, 331
MwoI	GCNNNNNNNGC	3 cut(s)	158, 220, 934
NciI	CCSGG	1 cut(s)	203
NcoI	CCATGG	4 cut(s)	162, 780, 1238, 1304
NlaIV	GGNNCC	5 cut(s)	168, 230, 659, 1025, 2011
NmuCI	GTSAC	2 cut(s)	1454, 1748
NsiI	ATGCAT	1 cut(s)	1280
NspI	RCATGY	1 cut(s)	485
PceI	AGGCCT	2 cut(s)	477, 1662
PciSI	GCTCTTC	2 cut(s)	1053, 1914
PfeI	GAWTC	5 cut(s)	31, 172, 715, 865, 959
PkrI	GCNGC	6 cut(s)	416, 1359, 1653, 1882, 1906, 1962
PleI	GAGTC	2 cut(s)	271, 295
PpsI	GAGTC	2 cut(s)	271, 295
PshBI	ATTAAT	1 cut(s)	813
PsiI	TTATAA	1 cut(s)	621
Psp124BI	GAGCTC	1 cut(s)	1874
Psp1406I	AACGTT	1 cut(s)	1073
Psp6I	CCWGG	2 cut(s)	238, 329
PspGI	CCWGG	2 cut(s)	238, 329
PspN4I	GGNNCC	5 cut(s)	168, 230, 659, 1025, 2011
PspPI	GGNCC	2 cut(s)	192, 832
PsrI	GAACNNNNNNTAC	2 cut(s)	1816, 1848
PsuI	RGATCY	5 cut(s)	522, 657, 1111, 1702, 1771
RsaI	GTAC	4 cut(s)	280, 435, 575, 1853
RsaNI	GTAC	4 cut(s)	279, 434, 574, 1852
RseI	CAYNNNNRTG	3 cut(s)	93, 381, 1721
SacI	GAGCTC	1 cut(s)	1874
SalI	GTCGAC	1 cut(s)	265
SapI	GCTCTTC	2 cut(s)	1053, 1914
SaqAI	TTAA	6 cut(s)	27, 48, 813, 1218, 1689, 1802
SatI	GCNGC	6 cut(s)	415, 1358, 1652, 1881, 1905, 1961
Sau96I	GGNCC	2 cut(s)	192, 832
ScaI	AGTACT	1 cut(s)	575
SchI	GAGTC	2 cut(s)	272, 295
ScrFI	CCNGG	3 cut(s)	203, 240, 331
SduI	GDGCHC	4 cut(s)	225, 1053, 1065, 1874
SfaNI	GCATC	8 cut(s)	197, 579, 1115, 1135, 1339, 1514, 1585, 1789
SfcI	CTRYAG	1 cut(s)	1875
SmiMI	CAYNNNNRTG	3 cut(s)	93, 381, 1721
SmlI	CTYRAG	1 cut(s)	1940
SmoI	CTYRAG	1 cut(s)	1940
Sse9I	AATT	9 cut(s)	5, 727, 733, 819, 1189, 1199, 1378, 1727, 1934
SseBI	AGGCCT	2 cut(s)	477, 1662
SsiI	CCGC	3 cut(s)	684, 1482, 1598
SspI	AATATT	1 cut(s)	1401
SspMI	CTAG	4 cut(s)	836, 965, 1149, 1161
SstI	GAGCTC	1 cut(s)	1874
StuI	AGGCCT	2 cut(s)	477, 1662
StyD4I	CCNGG	3 cut(s)	201, 238, 329
StyI	CCWWGG	5 cut(s)	162, 780, 1007, 1238, 1304
TaaI	ACNGT	5 cut(s)	922, 1000, 1490, 1513, 1576
TaiI	ACGT	2 cut(s)	1076, 1755
TaqI	TCGA	6 cut(s)	266, 299, 817, 1343, 1710, 1985
TasI	AATT	9 cut(s)	5, 727, 733, 819, 1189, 1199, 1378, 1727, 1934
TatI	WGTACW	2 cut(s)	433, 573
TfiI	GAWTC	5 cut(s)	31, 172, 715, 865, 959
Tru1I	TTAA	6 cut(s)	27, 48, 813, 1218, 1689, 1802
Tru9I	TTAA	6 cut(s)	27, 48, 813, 1218, 1689, 1802
TscAI	CASTG	4 cut(s)	154, 352, 591, 834
TseFI	GTSAC	2 cut(s)	1454, 1748
TseI	GCWGC	6 cut(s)	414, 1357, 1651, 1880, 1904, 1960
Tsp45I	GTSAC	2 cut(s)	1454, 1748
TspGWI	ACGGA	1 cut(s)	1683
TspRI	CASTG	4 cut(s)	154, 352, 591, 834
VneI	GTGCAC	1 cut(s)	1049
VspI	ATTAAT	1 cut(s)	813
XapI	RAATTY	4 cut(s)	727, 733, 1189, 1934
XbaI	TCTAGA	1 cut(s)	1160
XceI	RCATGY	1 cut(s)	485
XcmI	CCANNNNNNNNNTGG	1 cut(s)	246
XmiI	GTMKAC	2 cut(s)	266, 1209
XspI	CTAG	4 cut(s)	836, 965, 1149, 1161
ZrmI	AGTACT	1 cut(s)	575
Zsp2I	ATGCAT	1 cut(s)	1280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.